[Repository Listing] / [Slicer3] / branches / cameraviewhell
 

Log of /branches/cameraviewhell

Parent Directory Parent Directory View Directory Listing Directory Listing


Sticky Revision:

Revision 9750  Directory Listing
Modified Mon Jun 22 04:06:01 2009 UTC (8 years, 3 months ago) by barre
ENH: minor fixes

Revision 9564  Directory Listing
Modified Tue May 19 21:57:03 2009 UTC (8 years, 4 months ago) by barre
ENH: linking

Revision 8178  Directory Listing
Modified Tue Dec 23 05:06:36 2008 UTC (8 years, 8 months ago) by barre
Copied from: trunk revision 8175
ENH: Creating branch cameraviewhell with code moved from trunk

Revision 8175  Directory Listing
Modified Mon Dec 22 16:41:21 2008 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk
BUG: Corrected typo in the processing step title

Revision 8174  Directory Listing
Modified Sun Dec 21 19:38:01 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: add flags for event broker logging via the command line

Revision 8173  Directory Listing
Modified Sat Dec 20 14:57:28 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
BUG: RigidRegistration, RigidRegistrationLib, and AffineRegistrationLib missing from the install

Revision 8172  Directory Listing
Modified Thu Dec 18 15:00:34 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
ENH: Style of help frame has been changed.

Revision 8171  Directory Listing
Modified Wed Dec 17 21:46:42 2008 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk
BUG: DiameterEstimator was compiled into a wrong location

Revision 8170  Directory Listing
Modified Wed Dec 17 19:49:34 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: extra formatting in the leak test code

Revision 8169  Directory Listing
Modified Wed Dec 17 19:35:43 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
COMP: add math define for windows

Revision 8168  Directory Listing
Modified Wed Dec 17 19:29:12 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: more fixes to multiple cam/views

Revision 8167  Directory Listing
Modified Wed Dec 17 19:05:23 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: check for application before removing observers

Revision 8166  Directory Listing
Modified Wed Dec 17 19:03:45 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
COMP: use portable function

Revision 8165  Directory Listing
Modified Wed Dec 17 14:13:33 2008 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk
ENH: Added tumor diameter estimation tool. Just a separate binary for
now, to do testing quicker.

Revision 8164  Directory Listing
Modified Tue Dec 16 22:06:46 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
BUG: image position

Revision 8163  Directory Listing
Modified Tue Dec 16 20:52:46 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
ENH: add some space between the fiducial text and the glyphs

Revision 8162  Directory Listing
Modified Tue Dec 16 20:52:08 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
ENH: right click on a row in the fiducials gui list box to jump all 2d slices to that RAS coordinate

Revision 8161  Directory Listing
Modified Tue Dec 16 20:38:29 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
COMP: warnings

Revision 8160  Directory Listing
Modified Tue Dec 16 20:38:11 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: try to fix more leaks

Revision 8159  Directory Listing
Modified Tue Dec 16 20:37:58 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: sometimes that pointer is NULL when trying to load corrupted modules

Revision 8158  Directory Listing
Modified Tue Dec 16 20:37:43 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: sometimes that pointer is NULL when trying to load corrupted modules

Revision 8157  Directory Listing
Modified Tue Dec 16 18:13:23 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: add control for displaying MRML ID's in the tree

Revision 8156  Directory Listing
Modified Tue Dec 16 18:12:19 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: added seeding selected, name fibers after the source

Revision 8155  Directory Listing
Modified Tue Dec 16 15:14:17 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: minor fixes

Revision 8154  Directory Listing
Modified Tue Dec 16 15:10:58 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: minor fixes

Revision 8153  Directory Listing
Modified Tue Dec 16 15:10:32 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: minor fixes

Revision 8152  Directory Listing
Modified Tue Dec 16 15:09:04 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: minor fixes

Revision 8151  Directory Listing
Modified Tue Dec 16 15:08:29 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: minor fixes

Revision 8150  Directory Listing
Modified Tue Dec 16 15:08:12 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: minor fixes

Revision 8149  Directory Listing
Modified Mon Dec 15 20:27:51 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
ENH: use the BuildHelpAndAboutFrame call instead of a custom help pane

Revision 8148  Directory Listing
Modified Mon Dec 15 20:26:39 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
ENH: implement NewObservableEvents, added null pointer check

Revision 8147  Directory Listing
Modified Mon Dec 15 20:25:12 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
COMP: set the parent widgets to null in the destructor before deleting

Revision 8146  Directory Listing
Modified Mon Dec 15 13:32:38 2008 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk
ENH: Updated ack tab with BSF logo

Revision 8145  Directory Listing
Modified Sun Dec 14 17:07:30 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: improved leak testing script

Revision 8144  Directory Listing
Modified Sun Dec 14 15:48:05 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: ROI transformations, changed ROI API to use doubles

Revision 8143  Directory Listing
Modified Sun Dec 14 14:03:19 2008 UTC (8 years, 9 months ago) by atriveg
Original Path: trunk
ENH: Added Rician-adapted Non Local Means filter to CLI/Diffusion applications

Revision 8142  Directory Listing
Modified Sun Dec 14 13:00:56 2008 UTC (8 years, 9 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated icons for Module Management Wizard and RemoteIO

Revision 8141  Directory Listing
Modified Sun Dec 14 12:59:54 2008 UTC (8 years, 9 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated resources for Module Management Wizard and RemoteIO

Revision 8140  Directory Listing
Modified Sun Dec 14 12:59:16 2008 UTC (8 years, 9 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated icons for Module Management Wizard and RemoteIO

Revision 8139  Directory Listing
Modified Sun Dec 14 01:09:36 2008 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk
BUG: Substituted "Linear registration" with "Rigid registration" for
rigid alignment. The first one fails on the same dataset it worked
before. Need to investigate.

Revision 8138  Directory Listing
Modified Sun Dec 14 01:08:21 2008 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk
ENH: added help and acks info

Revision 8137  Directory Listing
Modified Sat Dec 13 21:14:26 2008 UTC (8 years, 9 months ago) by atriveg
Original Path: trunk
ENH: Modification of DiffusionApplicaions on CLI; enhanced dwiFiltering and added a new filter

Revision 8136  Directory Listing
Modified Fri Dec 12 02:31:35 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: fix glyph enabling

Revision 8135  Directory Listing
Modified Thu Dec 11 17:55:09 2008 UTC (8 years, 9 months ago) by vmagnotta
Original Path: trunk
BUG: Added an install command to put the MIMX
libraries into the distribution during
packaging.

Revision 8134  Directory Listing
Modified Thu Dec 11 17:50:34 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: reformat indentation

Revision 8133  Directory Listing
Modified Thu Dec 11 17:44:58 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: reformat indentation

Revision 8132  Directory Listing
Modified Thu Dec 11 17:01:09 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
ENH: update the 3d fiducial symbols (sphere and diamond) so that they have a diameter of 1mm, and change the default symbol size in the list node so the display is about the same

Revision 8131  Directory Listing
Modified Thu Dec 11 15:49:54 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: reformat indentation

Revision 8130  Directory Listing
Modified Thu Dec 11 14:57:40 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: finer tuned support for turning modules on and off plus leak fixes

Revision 8129  Directory Listing
Modified Thu Dec 11 14:22:20 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: fixed a bunch of widget leaks - still more to be done...

Revision 8128  Directory Listing
Modified Thu Dec 11 07:08:00 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: reformat indentation

Revision 8127  Directory Listing
Modified Thu Dec 11 05:21:31 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: Stochastic Tracto Python

Revision 8126  Directory Listing
Modified Thu Dec 11 04:46:45 2008 UTC (8 years, 9 months ago) by tgl
Original Path: trunk
ENH renaming to make more sense, work in progress UI update

Revision 8125  Directory Listing
Modified Thu Dec 11 04:27:26 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: Stochastic Tracto Python

Revision 8124  Directory Listing
Modified Thu Dec 11 04:26:05 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: Stochastic Tracto Python

Revision 8123  Directory Listing
Modified Thu Dec 11 04:25:18 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: Stochastic Tracto Python

Revision 8122  Directory Listing
Modified Thu Dec 11 04:24:27 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: Stochastic Tracto Python

Revision 8121  Directory Listing
Modified Thu Dec 11 04:14:37 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: Stochastic Tracto Python

Revision 8120  Directory Listing
Modified Thu Dec 11 04:14:01 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: Stochastic Tracto Python

Revision 8119  Directory Listing
Modified Thu Dec 11 04:07:05 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: legacy support, the active flag on the vtkMRMLViewNode was saved, but not used. Sadly, it was saved as "false", which means that now that this flag is used, snapshots start disabling the view! Try to work around this.

Revision 8118  Directory Listing
Modified Thu Dec 11 04:00:05 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: Stochastic Tracto Python

Revision 8117  Directory Listing
Modified Thu Dec 11 03:58:24 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: Stochastic Tracto Python

Revision 8116  Directory Listing
Modified Thu Dec 11 03:38:22 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: Stochastic Tracto Python

Revision 8115  Directory Listing
Modified Thu Dec 11 03:31:30 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: Stochastic Tracto Python

Revision 8114  Directory Listing
Modified Thu Dec 11 03:29:05 2008 UTC (8 years, 9 months ago) by clisle
Original Path: trunk
BUG: changing order to move Adapter before Common in case this resolves build issues. 

Revision 8113  Directory Listing
Modified Thu Dec 11 00:54:36 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: ROI display stuff

Revision 8112  Directory Listing
Modified Wed Dec 10 23:00:58 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
ENH: fix the lock/unlock toggle responding to lock/unlock all lists. Changed those to text buttons until the GUI debate settles down.

Revision 8111  Directory Listing
Modified Wed Dec 10 22:47:29 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: avoid crashes when module is suppressed (GUI is never built)

Revision 8110  Directory Listing
Modified Wed Dec 10 22:30:59 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
BUG: 

Revision 8109  Directory Listing
Modified Wed Dec 10 19:36:36 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
COMP: patches for Solaris from Attila Nagy (thanks, Attila\!)

Revision 8108  Directory Listing
Modified Wed Dec 10 17:59:49 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
BUG: fixed pointer error for context menu

Revision 8107  Directory Listing
Modified Wed Dec 10 17:06:12 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
BUG: fixed segmentation fault in vtkOpenIGTLinkIFLogic::RegisterMessageConverter().

Revision 8106  Directory Listing
Modified Wed Dec 10 15:05:59 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: documentation link in the help frame

Revision 8105  Directory Listing
Modified Wed Dec 10 15:05:24 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: new documentation and publication links in the main menu

Revision 8104  Directory Listing
Modified Wed Dec 10 14:36:48 2008 UTC (8 years, 9 months ago) by clisle
Original Path: trunk
ENH: minor cleanup of the CMakeLists files

Revision 8103  Directory Listing
Modified Wed Dec 10 14:34:00 2008 UTC (8 years, 9 months ago) by clisle
Original Path: trunk
BUG: removed side effect of direct Render() call, that was turning off RenderState on the underlying widget, instead of preserving whatever value was there before.  This interferes with modules which were calling the underlying widget incorrectly.  Remove the side effect on this method to let modules work, while the subject modules (e.g. IA_FEMesh) are refactored to only call the Render() method on vtkSlicerViewerWidget, not on the underlying vtkKWWRenderWindow instance.

Revision 8102  Directory Listing
Modified Wed Dec 10 02:32:31 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
BUG: bad array size for quaternion

Revision 8101  Directory Listing
Modified Wed Dec 10 00:09:05 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: prevent event loops when matrix is being set (transform scale callbacks)

Revision 8100  Directory Listing
Modified Tue Dec 9 22:53:01 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
ENH: lock/unlock all lists

Revision 8099  Directory Listing
Modified Tue Dec 9 22:43:21 2008 UTC (8 years, 9 months ago) by tgl
Original Path: trunk
ENH delete and create the modules wizard for every run, so call to module search starts with the initial step

Revision 8098  Directory Listing
Modified Tue Dec 9 22:41:47 2008 UTC (8 years, 9 months ago) by tgl
Original Path: trunk
ENH restart Slicer when OK is selected

Revision 8097  Directory Listing
Modified Tue Dec 9 22:22:58 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
BUG: check pointer after calling vtkIGTLToMRMLBase::GetNodeEvents().

Revision 8096  Directory Listing
Modified Tue Dec 9 22:20:41 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
ENH: expose the locked functionality on the fiducial list node.

Revision 8095  Directory Listing
Modified Tue Dec 9 22:20:34 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
ENH: take out the set macro for the Locked attribute, and replace it with a method that will throw a display modified event so that the manipulator seed widget can be en/disabled

Revision 8094  Directory Listing
Modified Tue Dec 9 21:41:06 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
COMP: fixed compile error.

Revision 8093  Directory Listing
Modified Tue Dec 9 21:36:04 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
ENH: vtkIGTLToMRMLBase class supports multiple device types

Revision 8092  Directory Listing
Modified Tue Dec 9 21:05:45 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
COMP: update use of Teem_TAG for consistency with other libs

Revision 8091  Directory Listing
Modified Tue Dec 9 20:06:51 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
BUG: make sure that the main viewer is not null before trying to do anything with it. Place holder until deal properly with the multiple views.

Revision 8090  Directory Listing
Modified Tue Dec 9 18:58:28 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
BUG: gcc requires string.h to define strcpy()/

Revision 8089  Directory Listing
Modified Tue Dec 9 18:55:27 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: fix direct selection of certain modules (virtual overrides on the Enter() method)

Revision 8088  Directory Listing
Modified Tue Dec 9 14:26:35 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: prevent update events from being triggered while the GUI is in the process of being updated

Revision 8087  Directory Listing
Modified Tue Dec 9 14:22:35 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: add support for Go To Editor in Data GUI selecting the picked node

Revision 8086  Directory Listing
Modified Tue Dec 9 03:27:52 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
BUG_FIXED remove observers before removing nodes from scen

Revision 8085  Directory Listing
Modified Tue Dec 9 01:46:17 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: fix python runtime dir

Revision 8084  Directory Listing
Modified Tue Dec 9 00:18:19 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
COMP: enable the RegisterImages module

Revision 8083  Directory Listing
Modified Mon Dec 8 22:31:15 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
BUG: update the icon for the list visibility when it's toggled in the process gui method

Revision 8082  Directory Listing
Modified Mon Dec 8 21:35:58 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: fix some issues when closing the scene. The layout was not brought back correctly, the nodes were not deleted correctly (why is NodeRemovedEvent not called when the scene is closed?)

Revision 8081  Directory Listing
Modified Mon Dec 8 19:27:02 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: fix fiducials IO

Revision 8080  Directory Listing
Modified Mon Dec 8 17:23:53 2008 UTC (8 years, 9 months ago) by clisle
Original Path: trunk
ENH: Turning on Meshing module by default in Modules/CMakeLists.txt

Revision 8079  Directory Listing
Modified Mon Dec 8 17:11:01 2008 UTC (8 years, 9 months ago) by clisle
Original Path: trunk
BUG: adding missing resource directory to IA_FEMesh BuildingBlock library

Revision 8078  Directory Listing
Modified Mon Dec 8 16:49:47 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: re-enable the Render() method of the viewer - this means that widgets and other code which bypass the RequestRender method will trigger an actual render.  This can lead to redundant renders, but at least none will be dropped

Revision 8077  Directory Listing
Modified Mon Dec 8 15:56:16 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: check for node value before removing observer

Revision 8076  Directory Listing
Modified Mon Dec 8 15:00:52 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: tone down the slice intersections by using opacity

Revision 8075  Directory Listing
Modified Mon Dec 8 10:01:17 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: second stab at custom views

Revision 8074  Directory Listing
Modified Mon Dec 8 09:31:27 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: agh

Revision 8073  Directory Listing
Modified Sun Dec 7 23:42:55 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: fixed extra Delete casing crash

Revision 8072  Directory Listing
Modified Sun Dec 7 21:02:00 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: fix leaks

Revision 8071  Directory Listing
Modified Sat Dec 6 21:56:32 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: remove useless include

Revision 8070  Directory Listing
Modified Sat Dec 6 19:43:07 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: clip models use ROI node and widget

Revision 8069  Directory Listing
Modified Sat Dec 6 19:35:38 2008 UTC (8 years, 9 months ago) by hliu
Original Path: trunk
ENH: turned USE_OPENIGTLINK to ON. This will build OpenIGTLink and NeuroNav modules by default when Slicer is compiled.

Revision 8068  Directory Listing
Modified Sat Dec 6 10:43:24 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
ENH: Revamped the unpacking of layouts.  For every layout there is now a Unpack*View() method to match the Pack*View() method.  This makes it straightforward to add layouts and control layouts because the Unpack*View() is responsible for undoing whatever the Pack*View() method did.
BUG: side effect of the above change is that it fixed the bug where starting in 4up view and switching to conventional view did not show the slice views
ENH: cleaned up the API a bit
ENH: simplified the code creating the default slice viewers



Revision 8067  Directory Listing
Modified Fri Dec 5 22:21:40 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
ENH: simplify... no need to GridSpanGUI.  We should be able to just GridGUI.

Revision 8066  Directory Listing
Modified Fri Dec 5 22:03:42 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: fix startup condition so slice intersections aren't visible by default unless the node default is to have them turned on

Revision 8065  Directory Listing
Modified Fri Dec 5 21:52:12 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
BUG: crash when starting on Conventional View and switching to Red View. Bug somehow related to the deletion and recreation of the GridFrame2.  This frame was being deleted on a layout change because we could not get the grid geometry manager to clean itself up (still thought it had a rows and columns gridded). Turns out that "grid size" returns the cell of the last nonempty cell or the last cell which has a nonzero "weight", "minsize", or "pad".  Since we use "weights" in our grids, I put in code to run through the grids and rowconfigure/columnconfigure them to have zero weights when we are resetting the grids.  This helps in general to clear out the grids.  Sometimes, however, the grid still indicates it has slaves after we have ungridded.  Put in code "grid forget [grid slaves %s]" to force the grids to be empty.  This works every time a layout is changed except the first time, which still reports slaves are in the grid have ungridding.

Remaining BUG: if starting and 4up mode and switching to conventional mode, the 3 slice viewers are not packed.  Switching back to 4up and then back to conventional fixes this.

Revision 8064  Directory Listing
Modified Fri Dec 5 21:37:46 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: add menu item to toggle visibility of slice intersection lines

Revision 8063  Directory Listing
Modified Fri Dec 5 21:36:28 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: enable colored slice intersection view on slice views

Revision 8062  Directory Listing
Modified Fri Dec 5 21:32:46 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: add slice intersection visibility option

Revision 8061  Directory Listing
Modified Fri Dec 5 20:48:34 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: fix camera deletion (once we make it editable in the tree), and the navigation panel UI at the bottom left

Revision 8060  Directory Listing
Modified Fri Dec 5 20:32:25 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
BUG: fixed problem of memory re-allocation for incoming image data

Revision 8059  Directory Listing
Modified Fri Dec 5 16:56:04 2008 UTC (8 years, 9 months ago) by clisle
Original Path: trunk
ENH: Adding Replacement Meshing directory including IA_FEMesh module

Revision 8058  Directory Listing
Modified Fri Dec 5 16:46:32 2008 UTC (8 years, 9 months ago) by clisle
Original Path: trunk
ENH: deleting old Meshing module, before replacing with new version, including IA_FEMesh

Revision 8057  Directory Listing
Modified Fri Dec 5 16:36:44 2008 UTC (8 years, 9 months ago) by clisle
Original Path: trunk
ENH: temporarily removing Meshing directory from build while it is being updated to include the IA_FEMesh module

Revision 8056  Directory Listing
Modified Fri Dec 5 15:19:26 2008 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk
ENH: ROI step description not completely visible, widget does not adjust
the size. Temporary solution -- have single-line description.

Revision 8055  Directory Listing
Modified Fri Dec 5 15:11:15 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: fix missing renders during crop box interaction

Revision 8054  Directory Listing
Modified Fri Dec 5 12:37:46 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: fix leak

Revision 8053  Directory Listing
Modified Fri Dec 5 12:36:14 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: avoid 0 value for curvature scale

Revision 8052  Directory Listing
Modified Fri Dec 5 12:35:42 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: put slicer daemon helper applications in bin directory so they will be in path for installed slicer

Revision 8051  Directory Listing
Modified Fri Dec 5 12:34:46 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
STYLE: avoid extra debug prints

Revision 8050  Directory Listing
Modified Thu Dec 4 22:19:01 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: use the temp dir to store the module cache so multi-user installations will be able to have multiple caches per-user

Revision 8049  Directory Listing
Modified Thu Dec 4 19:54:55 2008 UTC (8 years, 9 months ago) by jvs
Original Path: trunk
ENH: put DTI supported

Revision 8048  Directory Listing
Modified Thu Dec 4 18:02:11 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: use the protected callback proc to prevent run-time errors during shutdown

Revision 8047  Directory Listing
Modified Thu Dec 4 16:39:55 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: avoid renaming nodes when spurious value changed events come from the entry widget

Revision 8046  Directory Listing
Modified Thu Dec 4 15:08:42 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
STYLE: indentation

Revision 8045  Directory Listing
Modified Thu Dec 4 15:06:05 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
BUG: fixed (?) the crash on startup when Slicer has cached a layout other than the conventional layout. Changed all the Pack*View methods so that make calls directly to KWWidgets rather than modifying the layout node.  The node is updated but WITHOUT modified events being issued. Note that alot of the confusion in manipulating the visibility of the split frames for various layouts is that KWWidgets considers the top frame of the split frame to be Frame2 while the frame inside that frame that we create is GridFrame1.  Conversely, KWWidgets considers the bottom frame of the split frame to be Frame1 while the frame inside there that we create is GridFrame2.
BUG: crash on split frame configure handler when using a layout that only utilized the top of the secondary panel.

Remaining BUG: if starting in 4 up view and change to conventional view, the slice viewers do not appear.  Switching back to 4 up view and back to conventional view fixes the problem.

Revision 8043  Directory Listing
Modified Wed Dec 3 18:48:05 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: add spaces for correctly formed XML

Revision 8042  Directory Listing
Modified Wed Dec 3 18:39:58 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
BUG: crosshair now tracks a change in settings invoked by a SceneCloseEvent.

Revision 8041  Directory Listing
Modified Wed Dec 3 18:38:54 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
BUG: invoke the SceneCloseEvent AFTER the singletons have been reset. The singletons are reset without sending ModifiedEvents. So watching for the SceneCloseEvent is needed to have the GUI reflect the state of the singletons.

Revision 8040  Directory Listing
Modified Wed Dec 3 18:36:57 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
ENH: initial settings
BUG: restore 

Revision 8039  Directory Listing
Modified Wed Dec 3 17:08:14 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
BUG: make cross hair selections match the default settings
BUG: typo in menu item

Revision 8038  Directory Listing
Modified Wed Dec 3 16:56:22 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
BUG: need to watch configure events to rebuild the crosshairs that span the viewport.

Revision 8037  Directory Listing
Modified Wed Dec 3 16:22:39 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
BUG: MRML events can change the crosshair mode, circumventing the LeaveEvent turning on the system cursor. On a change to a SliceCompositeNode, make sure the system cursor is "on" if the crosshair mode is NoCrosshair. Only hide the system cursor on an EnterEvent if the mode is NoCrosshair

Revision 8036  Directory Listing
Modified Wed Dec 3 16:19:05 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: ignore the registry setting for the layout on windows to work around a crash

Revision 8035  Directory Listing
Modified Tue Dec 2 23:47:51 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
BUG: fixed outgoing POSITION data bug

Revision 8034  Directory Listing
Modified Tue Dec 2 23:20:11 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
COMP: turn off python by default on windows until more issues are resolved

Revision 8033  Directory Listing
Modified Tue Dec 2 23:19:02 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
COMP: handle differing python include paths for numpy and fix doc string

Revision 8032  Directory Listing
Modified Tue Dec 2 23:03:04 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: fixed copy in fiducial list

Revision 8031  Directory Listing
Modified Tue Dec 2 23:00:26 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: observe the slice node so the view updates when doing things like restoring scene snapshots

Revision 8030  Directory Listing
Modified Tue Dec 2 20:14:51 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: added ROI viewer, modified ROI MRML and widgets

Revision 8027  Directory Listing
Modified Tue Dec 2 13:33:11 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: The VS 7 compiler was having trouble compiling CheckDWMRI. A typedef for the Transform was needed to get around this apparent bug in the compiler.

Revision 8026  Directory Listing
Modified Tue Dec 2 13:30:43 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: Chnage the name of the templated function DemonsRegistrationFunction to DoDemonsRegistration. The original name was the same as the name of an itk class. The VS 7 compiler was confused by this.

Revision 8025  Directory Listing
Modified Tue Dec 2 05:23:56 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
STYLE: added comments about image center

Revision 8024  Directory Listing
Modified Tue Dec 2 05:18:24 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
BUG: fixed  problem of slice orientation in real-time imaging.

Revision 8022  Directory Listing
Modified Tue Dec 2 01:14:39 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
BUG: Fixed orientation of the locator (the default orientation of the locator became (0, 0, 1))

Revision 8021  Directory Listing
Modified Mon Dec 1 23:24:03 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
BUG: fixed segmentation faults in real-time imaging and slice drive

Revision 8020  Directory Listing
Modified Mon Dec 1 22:45:23 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
COMP: moved vtkMaskPoints instance into module logic so points will not get randomized everytime a parameter is changed.  Required adding a SetModuleLogic method and instance variable - why were these not present before, one asks...).  Additional cleanups and typo fixes

Revision 8019  Directory Listing
Modified Mon Dec 1 22:39:21 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: include image spacing in the distance transform calculation

Revision 8018  Directory Listing
Modified Mon Dec 1 22:38:38 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: rearrange pipeline to better capture input shape (calculate distance transform first, then downsample)

Revision 8016  Directory Listing
Modified Mon Dec 1 21:16:48 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: use python native routines to construct joined path

Revision 8015  Directory Listing
Modified Mon Dec 1 20:52:46 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: handle paths with spaces

Revision 8014  Directory Listing
Modified Mon Dec 1 20:52:15 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: fix fiducial cycling behavior per bug http://www.na-mic.org/Bug/view.php?id=344

Revision 8013  Directory Listing
Modified Mon Dec 1 20:01:28 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: avoid setting output spacing directly on image data (could be evil!) by using ImageChangeInformation

Revision 8012  Directory Listing
Modified Mon Dec 1 19:27:06 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
BUG: avoid warnings by checking inputs before calling Update

Revision 8011  Directory Listing
Modified Mon Dec 1 18:53:03 2008 UTC (8 years, 9 months ago) by pieper
Original Path: trunk
ENH: show tensor values when probing

Revision 8010  Directory Listing
Modified Mon Dec 1 16:46:52 2008 UTC (8 years, 9 months ago) by millerjv
Original Path: trunk
BUG: removed unnecessary render on crosshair positioning. ENH: cleaned up some of the logic

Revision 8009  Directory Listing
Modified Mon Dec 1 14:13:46 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
COMP: fixed compile warnings.

Revision 8008  Directory Listing
Modified Mon Dec 1 07:35:26 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
ENH: Real-time imaging has been re-implemented.

Revision 8007  Directory Listing
Modified Sun Nov 30 22:55:28 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: added ROI viewer widget, reworked ROI module and GUI

Revision 8006  Directory Listing
Modified Sun Nov 30 19:41:11 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
BUG: In ::Copy, the wrong type was specified for SetTransformNodeID. The VS 7 compiler detected the problem since there was an attempt top access protected member data from vtkMRMLTransformeNode.

Revision 8005  Directory Listing
Modified Sun Nov 30 18:42:35 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
BUG: Remove dependency on CheckerBoard executable because it does not exist.

Revision 8004  Directory Listing
Modified Sun Nov 30 00:22:54 2008 UTC (8 years, 9 months ago) by tgl
Original Path: trunk
ENH revert last change

Revision 8003  Directory Listing
Modified Sun Nov 30 00:22:08 2008 UTC (8 years, 9 months ago) by tgl
Original Path: trunk
ENH switch location to na-mic.org

Revision 8002  Directory Listing
Modified Sat Nov 29 23:16:59 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
ENH: added POSITION data type

Revision 8001  Directory Listing
Modified Sat Nov 29 21:14:49 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
STYLE: removed AddVolumeNode() and AddTransformNode() from Logic class.

Revision 8000  Directory Listing
Modified Sat Nov 29 19:48:48 2008 UTC (8 years, 9 months ago) by tgl
Original Path: trunk
ENH list of sources on NAMIC Sandbox

Revision 7999  Directory Listing
Modified Sat Nov 29 16:42:58 2008 UTC (8 years, 9 months ago) by tgl
Original Path: trunk
ENH add checkbox for source download, list all repositories

Revision 7998  Directory Listing
Modified Fri Nov 28 16:18:53 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: fixed copy in fiducial list

Revision 7997  Directory Listing
Modified Thu Nov 27 20:44:17 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: optimized copy in fiducial list

Revision 7996  Directory Listing
Modified Thu Nov 27 18:03:01 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: optimized copy in fiducial list

Revision 7995  Directory Listing
Modified Thu Nov 27 17:26:30 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: added new functionality to tractography seeding, fixed snapshot node storing internal nodes in the scene.

Revision 7994  Directory Listing
Modified Thu Nov 27 07:13:19 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
ENH: Converters (vtkIGTLToMRML classes is now working.

Revision 7993  Directory Listing
Modified Thu Nov 27 03:15:12 2008 UTC (8 years, 9 months ago) by barre
Original Path: trunk
ENH: fix bug 0000366, fiducials and axis now follow the new active camera. Both had not been designed for a new camera to be used... Thanks to Nicole for noticing.

Revision 7992  Directory Listing
Modified Wed Nov 26 22:51:58 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
STYLE: put this in the Segmentation category so that we don't have both it and segmentation as sub menus

Revision 7991  Directory Listing
Modified Wed Nov 26 21:24:25 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
ENH: new test.

Revision 7990  Directory Listing
Modified Wed Nov 26 21:23:51 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
BUG: file should not have been committed.

Revision 7989  Directory Listing
Modified Wed Nov 26 21:23:01 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
ENH: baseline and input for new test.

Revision 7988  Directory Listing
Modified Wed Nov 26 21:07:09 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
ENH: new test.

Revision 7987  Directory Listing
Modified Wed Nov 26 21:01:57 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
ENH: new test.

Revision 7986  Directory Listing
Modified Wed Nov 26 21:01:29 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
ENH: new test baseline.

Revision 7985  Directory Listing
Modified Wed Nov 26 20:18:56 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
BUG: no per point visibility on lists with 3d glyphs (hide that column in the gui)

Revision 7984  Directory Listing
Modified Wed Nov 26 19:21:01 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
BUGFIX: was deleting my matrix too early

Revision 7983  Directory Listing
Modified Wed Nov 26 17:53:47 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
BUGFIX: apply the fiducial list transform to the point widgets, and invert it when moving them and setting a new value for a fiducial location

Revision 7982  Directory Listing
Modified Wed Nov 26 04:55:19 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
ENH: added vtkIGTLToMRMLImage class

Revision 7981  Directory Listing
Modified Wed Nov 26 04:33:03 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
ENH: added vtkIGTLToMRMLLinearTransform class

Revision 7980  Directory Listing
Modified Wed Nov 26 03:53:08 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
ENH: Added IGTL-MRML data converter class

Revision 7979  Directory Listing
Modified Wed Nov 26 02:26:25 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
ENH: improved memory managements

Revision 7978  Directory Listing
Modified Tue Nov 25 20:18:08 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: style, copyright, svn keywords and warnings.

Revision 7977  Directory Listing
Modified Tue Nov 25 19:48:21 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: added max number of seeding samples

Revision 7976  Directory Listing
Modified Tue Nov 25 19:23:08 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: style, copyright, svn keywords and warnings.

Revision 7974  Directory Listing
Modified Tue Nov 25 18:30:45 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: style, copyright, svn keywords and warnings.

Revision 7973  Directory Listing
Modified Tue Nov 25 17:52:58 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: added vtkSlicerROIDisplayWidget

Revision 7972  Directory Listing
Modified Tue Nov 25 17:46:58 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: style, copyright, svn keywords and warnings.

Revision 7971  Directory Listing
Modified Tue Nov 25 13:43:28 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: over-agressive warning removal.

Revision 7970  Directory Listing
Modified Tue Nov 25 03:10:49 2008 UTC (8 years, 9 months ago) by tgl
Original Path: trunk
ENH remove source listing, add new Mac build of the example module

Revision 7969  Directory Listing
Modified Tue Nov 25 01:32:31 2008 UTC (8 years, 9 months ago) by tokuda
Original Path: trunk
ENH: changed Data I/O configuration GUI

Revision 7968  Directory Listing
Modified Mon Nov 24 21:44:30 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: style, copyright, svn keywords and warnings.

Revision 7967  Directory Listing
Modified Mon Nov 24 21:40:29 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: style, copyright, svn keywords and warnings.

Revision 7966  Directory Listing
Modified Mon Nov 24 21:11:35 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: style, copyright, svn keywords and warnings.

Revision 7965  Directory Listing
Modified Mon Nov 24 19:36:19 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: style, copyright, svn keywords and warnings.

Revision 7964  Directory Listing
Modified Mon Nov 24 17:51:44 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: various warnings.

Revision 7963  Directory Listing
Modified Mon Nov 24 15:30:03 2008 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk
BUG: check return from write

Revision 7962  Directory Listing
Modified Sun Nov 23 22:57:18 2008 UTC (8 years, 9 months ago) by pkarasev3
Original Path: trunk
ENH: slight changes to input/output of new SFLS module. the output scalar map is binary yes contour / no contour, and input/output are vtkPolyData files.

Revision 7961  Directory Listing
Modified Sun Nov 23 19:01:51 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: various warnings.

Revision 7960  Directory Listing
Modified Sat Nov 22 23:26:41 2008 UTC (8 years, 9 months ago) by alexy
Original Path: trunk
ENH: added vtkSlicerROIDisplayWidget

Revision 7959  Directory Listing
Modified Sat Nov 22 19:13:10 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
ENH: Added cvs keywords.

Revision 7958  Directory Listing
Modified Sat Nov 22 19:06:12 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: delete tmp test files.

Revision 7957  Directory Listing
Modified Sat Nov 22 19:04:40 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: test svn keywords.

Revision 7956  Directory Listing
Modified Sat Nov 22 18:59:00 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: just a test.

Revision 7955  Directory Listing
Modified Sat Nov 22 18:56:48 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: just a test.

Revision 7954  Directory Listing
Modified Sat Nov 22 18:55:45 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: just a test.

Revision 7953  Directory Listing
Modified Sat Nov 22 18:54:11 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: just a test.

Revision 7952  Directory Listing
Modified Sat Nov 22 18:50:46 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: just a test.

Revision 7951  Directory Listing
Modified Sat Nov 22 16:52:58 2008 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk
COMP: various warnings.

Revision 7950  Directory Listing
Modified Sat Nov 22 05:37:23 2008 UTC (8 years, 9 months ago) by pohl
Original Path: trunk
ENH: Meassure Growth and Shrinkage seperatly 

Revision 7949  Directory Listing
Modified Sat Nov 22 05:36:57 2008 UTC (8 years, 9 months ago) by pohl
Original Path: trunk
ENH: Meassure Growth and Shrinkage seperatly 

Revision 7948  Directory Listing
Modified Sat Nov 22 05:36:25 2008 UTC (8 years, 9 months ago) by pohl
Original Path: trunk
ENH: Meassure Growth and Shrinkage seperatly 

Revision 7947  Directory Listing
Modified Sat Nov 22 05:35:37 2008 UTC (8 years, 9 months ago) by pohl
Original Path: trunk
ENH: Meassure Growth and Shrinkage seperatly 

Revision 7946  Directory Listing
Modified Fri Nov 21 19:41:01 2008 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk
BUG: fprintf() committed by mistake

Revision 7945  Directory Listing
Modified Fri Nov 21 19:32:19 2008 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk
ENH: Metric seed is now initialized for reproducibility of registration
results.

Revision 7944  Directory Listing
Modified Fri Nov 21 17:20:13 2008 UTC (8 years, 10 months ago) by lorensen
Original Path: trunk
COMP: various warnings.

Revision 7943  Directory Listing
Modified Fri Nov 21 15:49:08 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: switch to new DistanceTransformModel from DistanceMapModel

Revision 7942  Directory Listing
Modified Fri Nov 21 15:48:17 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: new distance transform model calculation

Revision 7941  Directory Listing
Modified Fri Nov 21 05:20:51 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH using XML files to show how it can be done

Revision 7940  Directory Listing
Modified Fri Nov 21 04:52:53 2008 UTC (8 years, 10 months ago) by fedorov
Original Path: trunk
BUG: Implementation of the asynchronous execution of registration did
not take into account some GUI and workflow pipeline reset issues, which
caused usage difficulties. The code has been changed to do registration
synchronously upon analysis type selection.

Revision 7939  Directory Listing
Modified Fri Nov 21 04:26:27 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH added support for using an XML-like input file

Revision 7938  Directory Listing
Modified Fri Nov 21 04:25:24 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH add and implment ParseXmlDescripton to handle the loadable module XML-like description files

Revision 7937  Directory Listing
Modified Fri Nov 21 03:02:44 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH describe sources at NITRC

Revision 7936  Directory Listing
Modified Fri Nov 21 02:29:17 2008 UTC (8 years, 10 months ago) by pohl
Original Path: trunk
STYLE: Just made changes for debugging code - running the pipeline from the commandline gives the same results as from gui

Revision 7935  Directory Listing
Modified Fri Nov 21 02:27:25 2008 UTC (8 years, 10 months ago) by pohl
Original Path: trunk
BUG: Removed bug that change value dependentend on initial value of Analysis_Intensity_Sensitivity - Analysis_Intensity_Scan*->SetOutValue were not updated

Revision 7934  Directory Listing
Modified Fri Nov 21 02:25:21 2008 UTC (8 years, 10 months ago) by pohl
Original Path: trunk
ENH: Added function to write out volume for easier debugging

Revision 7933  Directory Listing
Modified Fri Nov 21 02:24:34 2008 UTC (8 years, 10 months ago) by pohl
Original Path: trunk
STYLE: just changed default value of Analysis_Intensity_Sensitivity  

Revision 7932  Directory Listing
Modified Fri Nov 21 02:23:39 2008 UTC (8 years, 10 months ago) by pohl
Original Path: trunk
STYLE: just cleaned up code 

Revision 7929  Directory Listing
Modified Fri Nov 21 02:06:27 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH list all sources in a platform agnostic file

Revision 7928  Directory Listing
Modified Thu Nov 20 23:38:02 2008 UTC (8 years, 10 months ago) by barre
Original Path: trunk
ENH: first stab at multiple cameras. Check the camera module in the list of module to create new camera and assign them to the current view (this should probably be moved to a more accessible place/icon in the "Manipulate 3D view" tab); explicit camera parameters should be added too (say numerical position, focal point, angle), but again, not sure where. New views can be created, but won't show in the UI until I understand the undocumented code that is vtkSlicerViewerWidget and vtkSlicerApplicationGUI...

Revision 7927  Directory Listing
Modified Thu Nov 20 23:37:42 2008 UTC (8 years, 10 months ago) by barre
Original Path: trunk
ENH: first stab at multiple cameras. Check the camera module in the list of module to create new camera and assign them to the current view (this should probably be moved to a more accessible place/icon in the "Manipulate 3D view" tab); explicit camera parameters should be added too (say numerical position, focal point, angle), but again, not sure where. New views can be created, but won't show in the UI until I understand the undocumented code that is vtkSlicerViewerWidget and vtkSlicerApplicationGUI...

Revision 7926  Directory Listing
Modified Thu Nov 20 23:31:17 2008 UTC (8 years, 10 months ago) by barre
Original Path: trunk
COMP: you guys should try 64bits...

Revision 7925  Directory Listing
Modified Thu Nov 20 23:30:32 2008 UTC (8 years, 10 months ago) by barre
Original Path: trunk
COMP: you guys should try 64bits...

Revision 7924  Directory Listing
Modified Thu Nov 20 23:29:39 2008 UTC (8 years, 10 months ago) by barre
Original Path: trunk
COMP: you guys should try 64bits...

Revision 7921  Directory Listing
Modified Thu Nov 20 20:59:19 2008 UTC (8 years, 10 months ago) by tokuda
Original Path: trunk
ENH: logic of device list management

Revision 7918  Directory Listing
Modified Wed Nov 19 21:18:54 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
STYLE: add additional documentation about collapsing modified events

Revision 7917  Directory Listing
Modified Wed Nov 19 18:47:07 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: add RemoveObserverByNumber method for GUI observers

Revision 7916  Directory Listing
Modified Wed Nov 19 17:25:47 2008 UTC (8 years, 10 months ago) by fedorov
Original Path: trunk
ENH: Linear registration part: added creation of the transform nodes and
release of pointers for the output volumes.

Revision 7915  Directory Listing
Modified Wed Nov 19 16:20:10 2008 UTC (8 years, 10 months ago) by fedorov
Original Path: trunk
ENH: Added "Linear registration" module functionality for ROI
registration. Need to investigate better LR parameter settings.

Revision 7913  Directory Listing
Modified Wed Nov 19 15:18:52 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
COMP: handle long long types on linux 64 (apparently old design pattern did not work?)

Revision 7912  Directory Listing
Modified Wed Nov 19 15:09:41 2008 UTC (8 years, 10 months ago) by tokuda
Original Path: trunk
BUG: fixed bugs in MRML node list table manipulation in MRML node list.

Revision 7911  Directory Listing
Modified Wed Nov 19 14:32:32 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
COMP: enable python and numpy by defualt (linux and mac) but do not enable netlib and scipy due to cross platform compile issues.  COMP: enable transform io factories in itk by default

Revision 7910  Directory Listing
Modified Wed Nov 19 05:16:57 2008 UTC (8 years, 10 months ago) by jvs
Original Path: trunk
BUG: detect DWI dimensions

Revision 7909  Directory Listing
Modified Wed Nov 19 03:55:52 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH move manifest entry description into Wizard so that it can be used by all steps

Revision 7908  Directory Listing
Modified Wed Nov 19 03:51:50 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH add and implement InstallSource, display results of installation in text box

Revision 7905  Directory Listing
Modified Wed Nov 19 01:36:41 2008 UTC (8 years, 10 months ago) by tokuda
Original Path: trunk
ENH: Changed GUI layout and fixed several GUI-related bugs.

Revision 7904  Directory Listing
Modified Tue Nov 18 23:05:00 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
BUG: use copy of vtkStringArray so --ignore-module argument doesn't get written to registry

Revision 7903  Directory Listing
Modified Tue Nov 18 23:03:23 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: update distance transform to get rid of vtkITKImageToImageFilterUSF and use simpler vtkSimpleImageFilter code

Revision 7902  Directory Listing
Modified Tue Nov 18 19:49:53 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: fixed misc bugs in mrml

Revision 7901  Directory Listing
Modified Tue Nov 18 19:28:45 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: fixed misc bugs in mrml

Revision 7900  Directory Listing
Modified Tue Nov 18 19:21:28 2008 UTC (8 years, 10 months ago) by fedorov
Original Path: trunk
BUG: fixed Baloon/Balloon typo
ENH: fixed warnings in ImageIslandFilter

Revision 7899  Directory Listing
Modified Tue Nov 18 19:11:25 2008 UTC (8 years, 10 months ago) by fedorov
Original Path: trunk
ENH: added "Linear registration" module functionality, and corresponding
changes to MRML node, GUI initialization and event handling.

Revision 7898  Directory Listing
Modified Tue Nov 18 16:30:59 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: fixed ClipModels

Revision 7897  Directory Listing
Modified Tue Nov 18 04:10:53 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH use the ViewVC link

Revision 7896  Directory Listing
Modified Tue Nov 18 03:20:11 2008 UTC (8 years, 10 months ago) by fedorov
Original Path: trunk
ENH: Change request from Kilian Pohl c/o Andriy Fedorov

Revision 7895  Directory Listing
Modified Mon Nov 17 22:36:57 2008 UTC (8 years, 10 months ago) by fedorov
Original Path: trunk
ENH: updated naming conventions for ChangeTracker module. Initial commit in a
sequence of updates to substitute rigid registration component of
ChangeTracker with the functionality of the "Linear registration" module.

Revision 7894  Directory Listing
Modified Mon Nov 17 22:19:08 2008 UTC (8 years, 10 months ago) by pohl
Original Path: trunk
BUG: tcl error messages came up when only deformable metric was called  

Revision 7893  Directory Listing
Modified Mon Nov 17 19:58:23 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
BUG: disable sorting dicom images by trigger time, since this does not match the volume definition for some MR files (additional tools will probably be needed).

Revision 7892  Directory Listing
Modified Sat Nov 15 17:54:52 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: fixed ClipModels

Revision 7891  Directory Listing
Modified Sat Nov 15 17:21:45 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: fixed ClipModels

Revision 7890  Directory Listing
Modified Sat Nov 15 16:21:39 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: fixed ClipModels

Revision 7889  Directory Listing
Modified Sat Nov 15 03:37:35 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: fixed ClipModels

Revision 7888  Directory Listing
Modified Sat Nov 15 01:08:57 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: who knew you could find all the instances of a particular itcl class using the -class option in itcl::find.  actually, Steve knew.

Revision 7887  Directory Listing
Modified Fri Nov 14 20:43:25 2008 UTC (8 years, 10 months ago) by naucoin
Original Path: trunk
STYLE: even though the New methods are commented out, make sure they have static_cast rather than C style casts. The new macros seem to work with changes to the superclass

Revision 7886  Directory Listing
Modified Fri Nov 14 20:43:21 2008 UTC (8 years, 10 months ago) by naucoin
Original Path: trunk
BUGFIX: trying to fix casting crashes when getting URI handler subclasses, make the superclass use a new macro instead of returning NULL

Revision 7885  Directory Listing
Modified Fri Nov 14 20:28:17 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
BUG: include the patch number in the variable constructing the Teem installed directory

Revision 7884  Directory Listing
Modified Fri Nov 14 18:32:53 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: made work ClipModels module

Revision 7883  Directory Listing
Modified Fri Nov 14 18:24:08 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: made work ClipModels module

Revision 7882  Directory Listing
Modified Fri Nov 14 18:05:51 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: made work ClipModels module

Revision 7881  Directory Listing
Modified Fri Nov 14 17:44:44 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: made work ClipModels module

Revision 7880  Directory Listing
Modified Fri Nov 14 13:04:18 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
COMP: BUG: remove accidental checkin of experimental subdir

Revision 7879  Directory Listing
Modified Fri Nov 14 13:03:19 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: from Mark Anderson and Marianna Jakab - add output label option for segmentation

Revision 7878  Directory Listing
Modified Thu Nov 13 22:45:19 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
STYLE: indentation
ENH: Added another API to loop over the slice guis. Not terribly efficient but simpler to use.

Revision 7877  Directory Listing
Modified Thu Nov 13 22:38:47 2008 UTC (8 years, 10 months ago) by tokuda
Original Path: trunk
BUG: Switch from VTK socket to OpenIGTLink socket (vtk socket didn't work in Slicer 3.3 on Windows...)

Revision 7876  Directory Listing
Modified Thu Nov 13 20:00:11 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: spacing text

Revision 7875  Directory Listing
Modified Thu Nov 13 19:17:54 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated image data and resource file

Revision 7874  Directory Listing
Modified Thu Nov 13 19:15:44 2008 UTC (8 years, 10 months ago) by tokuda
Original Path: trunk
BUG: check SliceViewer, RenderWidget, RenderWindowInteractor etc. pointers to avoid crash.

Revision 7873  Directory Listing
Modified Thu Nov 13 19:10:45 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: when sending images to the red viewer, force the matrices to be recalculated to the right image displayed in the active slice.

Revision 7872  Directory Listing
Modified Thu Nov 13 18:58:59 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: sending images to red viewer from compare viewer. offset calculation did not take into account the active slice in the red viewer (just the active slice in the compare viewer).  now takes into account both. 
BUG: (NOT FIXED YET) sending an image to the red viewer changes the background/foreground image correctly but renders the wrong slice initially.  An EnterEvent clears it up.  Had this same issue in the automatic control of the slice spacing in the comapre views not updating until an EnterEvent. Needed a call to resizeSliceNode to fix it. Will try that next.

Revision 7871  Directory Listing
Modified Thu Nov 13 18:31:41 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: zooming in red viewer when compare views were linked caused the compare views to zoom and distort. Changed to red view does not interact with compare views

Revision 7870  Directory Listing
Modified Thu Nov 13 18:02:22 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
BUG: oops, should be *Volume* not *Area*

Revision 7869  Directory Listing
Modified Thu Nov 13 17:55:43 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: add area calculation to the calculated statistics

Revision 7868  Directory Listing
Modified Thu Nov 13 17:13:41 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
ENH: Added support for OpenIGTLink library.

Revision 7867  Directory Listing
Modified Thu Nov 13 16:28:33 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: modified gui for slice spacing mode + controls

Revision 7866  Directory Listing
Modified Thu Nov 13 16:27:28 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: modified image data for slice spacing

Revision 7865  Directory Listing
Modified Thu Nov 13 16:26:33 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: modified resources for slice spacing

Revision 7864  Directory Listing
Modified Thu Nov 13 15:11:27 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: trying to minimize the number of renders

Revision 7863  Directory Listing
Modified Thu Nov 13 14:58:41 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: defomation field needs to be specified as a vector image

Revision 7862  Directory Listing
Modified Thu Nov 13 14:42:37 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: hide the system cursor on EnterEvent SliceViewer
BUG: hide crosshairs on LeaveEvent

Revision 7861  Directory Listing
Modified Thu Nov 13 14:08:47 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: exit event handler early if not using a crosshair

Revision 7860  Directory Listing
Modified Thu Nov 13 13:51:44 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: no need to observe the slice node. no need to Render in updateCrosshair

Revision 7859  Directory Listing
Modified Thu Nov 13 04:18:27 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: observations added to the wrong node (twice to slice node instead of slice node and slice composite node)
BUG: variable in class already defined in superclass

Revision 7858  Directory Listing
Modified Thu Nov 13 03:30:01 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: few bugs with lingering cursors

Revision 7857  Directory Listing
Modified Thu Nov 13 02:39:53 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: JumpSlice now jumps so the RAS position is put on the active slice.

Revision 7856  Directory Listing
Modified Wed Nov 12 23:29:07 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: resources for slice spacing icons

Revision 7855  Directory Listing
Modified Wed Nov 12 23:28:28 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: icons for slice spacing

Revision 7854  Directory Listing
Modified Wed Nov 12 23:03:11 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: added Box widget mechanism to 3d viewer and ClipModel module

Revision 7853  Directory Listing
Modified Wed Nov 12 20:10:58 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: crosshairs now operational for lightbox

Revision 7852  Directory Listing
Modified Wed Nov 12 20:09:09 2008 UTC (8 years, 10 months ago) by lorensen
Original Path: trunk
COMP: warnings.

Revision 7851  Directory Listing
Modified Wed Nov 12 19:56:49 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: Moved the child SWidgets of the SliceSWidget to the end of the constructor so their events will not take precedence over the events of the SliceSWidget.  The Crosshair updated when using just SHIFT-MouseMove requires that SliceSWidget run its event handler then the Crosshair run its event handler (SliceSWidget will change the slice and sliceToRAS, then the Crosshair will position the cursor on the (now) visible slice).
BUG: missed one of the placed to format the precision of spacing
BUG: Don't show a linked cross hair if the RAS isn't on a visibile slice

Revision 7850  Directory Listing
Modified Wed Nov 12 18:38:45 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH:fixed compile warning

Revision 7849  Directory Listing
Modified Wed Nov 12 17:00:04 2008 UTC (8 years, 10 months ago) by lorensen
Original Path: trunk
BUG: remove trailing .0's from fiducial coordinates.

Revision 7848  Directory Listing
Modified Wed Nov 12 15:52:48 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: added access methods

Revision 7847  Directory Listing
Modified Wed Nov 12 15:31:13 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: precision formatting of spacing in annotation

Revision 7846  Directory Listing
Modified Wed Nov 12 14:05:40 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: SliceCompositeNode now maintains whether the tracked cursor should or should not jump the slices. SliceNode now maintains whether the jumping is done by centering of slice offset.

Revision 7845  Directory Listing
Modified Wed Nov 12 03:04:25 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
BUG include necessary libraries

Revision 7844  Directory Listing
Modified Wed Nov 12 03:01:07 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: broke the SHIFT-mouse-move jump slice on previous checkin. This checkin should be considered a temporary fix.  I'd like the JumpMode to be used for both tracked cursors and SHIFT-mouse-move. Perhaps two modes are needed.  One for jump/no jump. One for how to jump.

Revision 7843  Directory Listing
Modified Wed Nov 12 02:45:55 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: New JumpSlice mode. JumpSlice can either jump to an RAS position such that position is centered in the FOV or JumpSlice can jump to an RAS position by just adjusting the slice offset. This required moving the CrosshairBehavior from the SliceCompositeNode to the JumpMode of the SliceNode.

Revision 7842  Directory Listing
Modified Tue Nov 11 20:43:03 2008 UTC (8 years, 10 months ago) by hayes
Original Path: trunk
ENH: Changed teem checkout from https to http

Revision 7841  Directory Listing
Modified Tue Nov 11 18:49:06 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
ENH: Added additional condition to check OpenIGTLink test file.

Revision 7840  Directory Listing
Modified Tue Nov 11 18:46:50 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
ENH: Added additional condition to check OpenIGTLink test file.

Revision 7839  Directory Listing
Modified Tue Nov 11 17:22:59 2008 UTC (8 years, 10 months ago) by lorensen
Original Path: trunk
BUG: ^M's in xml file caused bogus generated CLP file.

Revision 7838  Directory Listing
Modified Tue Nov 11 15:45:10 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
ENH: Added CMake option for using OpenIGTLink library.

Revision 7837  Directory Listing
Modified Tue Nov 11 15:44:10 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
ENH: Added CMake option for using OpenIGTLink library.

Revision 7836  Directory Listing
Modified Tue Nov 11 15:43:29 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
ENH: Added CMake option for using OpenIGTLink library.

Revision 7835  Directory Listing
Modified Tue Nov 11 15:43:01 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
ENH: Added CMake option for using OpenIGTLink library.

Revision 7834  Directory Listing
Modified Tue Nov 11 15:35:30 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: First implementation of tracked cursor. Not supported in Lightbox yet. Should hide the system cursor. Ticked cursor still missing ticks. Might want a second "Jump" mode to not center the image on the cursor. Might recolor the cursors (each cursor could have two colors of red/green/yellow)
BUG: Menu logic kept Jump mode from being activated.

Revision 7833  Directory Listing
Modified Tue Nov 11 13:44:17 2008 UTC (8 years, 10 months ago) by pkarasev3
Original Path: trunk
ENH: adding files for levelset on a mesh segmentation. (not done / code cleaned up yet)

Revision 7831  Directory Listing
Modified Mon Nov 10 21:44:27 2008 UTC (8 years, 10 months ago) by lorensen
Original Path: trunk
COMP: warnings.

Revision 7830  Directory Listing
Modified Mon Nov 10 20:38:30 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
BUG: Temporarily commented out OpenIGTLinkIF module since it failed on compiling Windows.

Revision 7829  Directory Listing
Modified Mon Nov 10 17:46:33 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: Setting the viewport outline for active slice to 0 to 1

Revision 7828  Directory Listing
Modified Mon Nov 10 16:43:07 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: Added an ActiveSlice to designate which image in a Lightbox is shown in the 3D scene
ENH: ActiveSlice is outlined in the SliceViewer
ENH: ActiveSlice is the slice put in the 3D scene (needed to adjust the slice model position and which slice is extracted to put on the model as a texture)
ENH: "s" key in SliceViewer sets the ActiveSlice
ENH: Removed unncessary ivars (items are managed in lists or implictly by pipeline)
ENH: In CompareView, "s" puts the ActiveSlice in the red viewer background, "S" puts the ActiveSlice in the red viewer foreground

Revision 7827  Directory Listing
Modified Mon Nov 10 16:30:22 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
ENH: Removed OpenIGTLink module.

Revision 7826  Directory Listing
Modified Mon Nov 10 16:25:04 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
ENH: Removed OpenIGTLink and added OpenIGTLinkIF module.

Revision 7825  Directory Listing
Modified Mon Nov 10 16:16:14 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
STYLE: Removed IGSTK from Slicer3-lib and added OpenIGTLink into Slicer3-lib.

Revision 7824  Directory Listing
Modified Mon Nov 10 16:15:03 2008 UTC (8 years, 10 months ago) by hliu
Original Path: trunk
STYLE: Removed IGSTK from Slicer3-lib and added OpenIGTLink into Slicer3-lib.

Revision 7823  Directory Listing
Modified Mon Nov 10 15:26:53 2008 UTC (8 years, 10 months ago) by naucoin
Original Path: trunk
BUG: removed duplicate source file

Revision 7820  Directory Listing
Modified Sun Nov 9 03:46:17 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: Added menu item and popup to set the SliceSpacingMode and the PrescribedSliceSpacing

Revision 7819  Directory Listing
Modified Sun Nov 9 01:33:05 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: modification to LeaveEvent so a lightbox outside of a compare view will not reset the SliceSpacingMode back to automatic by default.

Revision 7818  Directory Listing
Modified Sat Nov 8 22:20:29 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: FINALLY! On EnterEvent, need to tell all the compare view SliceSWidgets about the slice spacing to use and then force them to reslice and render! This fixes the problem where entering a slice viewer would cause that slice to reslice to its slice spacing but would force the linked viewers to reslice until a focus event or zoom event was generated.

Revision 7817  Directory Listing
Modified Sat Nov 8 22:04:17 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: added method to locate the SliceSWidget for a SliceGUI

Revision 7816  Directory Listing
Modified Sat Nov 8 21:34:26 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: toggle corner visibility on all compare views on enter/leave

Revision 7815  Directory Listing
Modified Sat Nov 8 21:25:43 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: initializing compare view from Red viewer foreground and background volumes
ENH: update annotations in all compare views!
ENH: slice spacing in compare views almost completely working (sometimes an extra event is needed to get everything synced)

Revision 7813  Directory Listing
Modified Sat Nov 8 13:36:51 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: Couldn't enter lightbox mode when viewers were linked unless it was a compare viewer. Lightbox layout is linked for compare views and independent for the other viewers.

Revision 7812  Directory Listing
Modified Fri Nov 7 20:50:42 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: use the foreground and background images of the Red Viewer to prescribe images for the Compare View if none have been set.
BUG: Set the default number of viewers in the compare view to 2.

Revision 7811  Directory Listing
Modified Fri Nov 7 20:05:21 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: keep snapshot name, unique name start adding 1 second time

Revision 7810  Directory Listing
Modified Fri Nov 7 19:34:44 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: enabling PrescribedSliceSpacing

Revision 7809  Directory Listing
Modified Fri Nov 7 19:33:56 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: missing modified was causing issues with the offset scale widget with compare view

Revision 7808  Directory Listing
Modified Fri Nov 7 18:22:41 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: Keep track of the panel visibility and panel sizes in the MRMLLayoutNode
ENH: Callbacks on panel resizing 
ENH: Modify node instead of GUI for layout (unless already processing a MRML event)
BUG: Panels are not resized to default settings on SceneSnapshot.
BUG: Don't modify panel size when only need to change panel visibility

Revision 7807  Directory Listing
Modified Fri Nov 7 16:22:12 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: new approach to wand filter

Revision 7806  Directory Listing
Modified Fri Nov 7 14:31:42 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: turn off color flashing for model slices

Revision 7805  Directory Listing
Modified Thu Nov 6 23:33:01 2008 UTC (8 years, 10 months ago) by naucoin
Original Path: trunk
STYLE: print out an error message if there's no interaction node to change

Revision 7804  Directory Listing
Modified Thu Nov 6 23:32:22 2008 UTC (8 years, 10 months ago) by naucoin
Original Path: trunk
BUG: check to make sure that set the interactor style's application logic to a non null value, and use it instead of getting the interaction node from the scene (which breaks when restore scene snapshots). Also, for the QDEC module, use the pick manipulate mode to not conflict with the fiducials Place mode

Revision 7803  Directory Listing
Modified Thu Nov 6 18:42:07 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
STYLE: get rid of warning macro for a debug statement

Revision 7802  Directory Listing
Modified Thu Nov 6 17:56:28 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: avoid redundant renders by only allowing renders to happend from the idle callback - change fiducials to request render rather than relying on the widget to make the call for you

Revision 7801  Directory Listing
Modified Thu Nov 6 02:05:34 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH adding source line to darwin and CMake include file to be used by the Modules Wizard

Revision 7800  Directory Listing
Modified Thu Nov 6 01:11:52 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH use __APPLE__ macro.  Define state machine so as to jump to end when repository fails.

Revision 7799  Directory Listing
Modified Wed Nov 5 23:39:51 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
COMP: change from TEEM to Teem for compatibility with current svn trunk of teem

Revision 7798  Directory Listing
Modified Wed Nov 5 19:25:28 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: added TransformLogic and Load frame in Transform Module

Revision 7797  Directory Listing
Modified Wed Nov 5 16:47:10 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: fixed reparenting to itself in the MRMLTree widget

Revision 7796  Directory Listing
Modified Wed Nov 5 16:39:36 2008 UTC (8 years, 10 months ago) by pohl
Original Path: trunk
ENH: Version used for Journal Publication - allows shrinkage and is validated

Revision 7795  Directory Listing
Modified Wed Nov 5 16:34:16 2008 UTC (8 years, 10 months ago) by naucoin
Original Path: trunk
BUG: check for null pointers before using them

Revision 7794  Directory Listing
Modified Tue Nov 4 22:21:30 2008 UTC (8 years, 10 months ago) by naucoin
Original Path: trunk
ENH: source the tcl file, got rid of some compiler warnings

Revision 7793  Directory Listing
Modified Tue Nov 4 22:20:35 2008 UTC (8 years, 10 months ago) by naucoin
Original Path: trunk
ENH: install the helper tcl file

Revision 7792  Directory Listing
Modified Tue Nov 4 21:21:52 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
BUG: correctly recalculate the file list when the currently selected archetype is not included in the list

Revision 7791  Directory Listing
Modified Tue Nov 4 04:58:05 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updating SlicesControlGUI and SliceControllerWidget to use new compositing icon

Revision 7790  Directory Listing
Modified Tue Nov 4 04:56:26 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updating Foundation icons to include compositing, lock and unlock icons

Revision 7789  Directory Listing
Modified Tue Nov 4 04:55:03 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding resources for Compositing, Lock and Unlock icons

Revision 7788  Directory Listing
Modified Tue Nov 4 04:54:01 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding image data for three new icons

Revision 7787  Directory Listing
Modified Tue Nov 4 04:46:47 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH add a dummy file to the url if nothing matches the #ifdef

Revision 7786  Directory Listing
Modified Tue Nov 4 04:29:55 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH added loadable module manifests for Mac OS X and Solaris

Revision 7785  Directory Listing
Modified Tue Nov 4 04:26:18 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH put a looping constraint into the parse function

Revision 7784  Directory Listing
Modified Mon Nov 3 21:06:04 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: Fixed selection of "None" in node selectors when a previous run of the module had used a node other than "None". 
BUG: Fixed reference parameter linking for transforms (scene editing) when "None" node is selected.

Revision 7783  Directory Listing
Modified Mon Nov 3 19:55:14 2008 UTC (8 years, 10 months ago) by hayes
Original Path: trunk
ENH: Added flag for RelWithDebInfo compile.

Revision 7782  Directory Listing
Modified Mon Nov 3 19:44:49 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: Extend SlicesGUI to view settings for Slice nodes.
ENH: Slice nodes need to notify when added to the scene to get the node selector to UpdateGUI
ENH: Preparing for prescribing slice spacing for LightBox and CompareViews
ENH: ImageCast added when using non-alpha blending modes (checked in because file was modified for an above change as well).

Revision 7781  Directory Listing
Modified Mon Nov 3 19:36:04 2008 UTC (8 years, 10 months ago) by hayes
Original Path: trunk
ENH: Added flag for RelWithDebInfo compile.

Revision 7780  Directory Listing
Modified Mon Nov 3 15:59:42 2008 UTC (8 years, 10 months ago) by hjohnson
Original Path: trunk
COMP:  Resolved missing include path to resolve compiler error: vtkSlicerVolumesLogic.h: No such file or directory

Revision 7779  Directory Listing
Modified Mon Nov 3 01:29:59 2008 UTC (8 years, 10 months ago) by alexy
Original Path: trunk
ENH: reworked generic Storage/Storable nodes to be used with File->Save widget.

Revision 7778  Directory Listing
Modified Fri Oct 31 16:38:32 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: some code cleanup and a way to test the slice model display

Revision 7777  Directory Listing
Modified Fri Oct 31 15:07:19 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: new widget for displaying slices of models overlayed on volume slices

Revision 7776  Directory Listing
Modified Fri Oct 31 14:32:59 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
COMP: add flag when building teem to match slicer install tree layout

Revision 7775  Directory Listing
Modified Fri Oct 31 12:22:05 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
BUG: set to grey color table when switching away from label map - note: display tab does not respond correctly here and needs to be manually set to grey

Revision 7774  Directory Listing
Modified Fri Oct 31 12:12:45 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: add LabelMap checkbox to volumes info to allow switching volumes to/from labelmaps on the fly

Revision 7773  Directory Listing
Modified Thu Oct 30 17:11:45 2008 UTC (8 years, 10 months ago) by pohl
Original Path: trunk
ENH: Allows to track shrinkage

Revision 7772  Directory Listing
Modified Thu Oct 30 17:04:25 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
COMP: point to the correct location for the teem shared library (corresponds to a fix in the teem svn trunk also commited today)

Revision 7771  Directory Listing
Modified Thu Oct 30 01:13:48 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
BUG fixed download number

Revision 7770  Directory Listing
Modified Thu Oct 30 01:11:16 2008 UTC (8 years, 10 months ago) by tgl
Original Path: trunk
ENH adding win32 modules manifest

Revision 7767  Directory Listing
Modified Wed Oct 29 20:41:19 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: implementation of the module leak test script

Revision 7766  Directory Listing
Modified Wed Oct 29 20:24:17 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: start of new script to sequentially identify which loadable module is causing a leak

Revision 7764  Directory Listing
Modified Wed Oct 29 15:21:31 2008 UTC (8 years, 10 months ago) by hjohnson
Original Path: trunk
COMP: Missed submitting a file with minor compilation issue found under Macintosh build regarding missing typename, and unused variables.

Revision 7763  Directory Listing
Modified Wed Oct 29 15:15:41 2008 UTC (8 years, 10 months ago) by hjohnson
Original Path: trunk
COMP:  Minor compilation issue found under Macintosh build regarding missing typename, and unused variables.

Revision 7762  Directory Listing
Modified Wed Oct 29 14:16:04 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: avoid calling InvokeEvent directly - this cannot be disabled when used in a different thread.  Also clean up dead code.

Revision 7761  Directory Listing
Modified Wed Oct 29 13:45:19 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH/BUG: add --ignore-module flag to command line arguments to support debugging modules and fix issue where deletes and other methods were being called on modules that weren't being loaded

Revision 7758  Directory Listing
Modified Tue Oct 28 20:20:14 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: typo in reference parameter name

Revision 7757  Directory Listing
Modified Tue Oct 28 20:19:43 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: progress reporting on RegistrationMethod

Revision 7756  Directory Listing
Modified Tue Oct 28 20:19:03 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: only report that nonlinear transform are not yet supported once

Revision 7755  Directory Listing
Modified Tue Oct 28 19:43:45 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: Support fixed and moving images with different pixeltypes (allows FA and structural MR to be registered)
BUG: Progress reporting on the registration method
ENH: Smoothing option for preprocessing (FA is pretty noisy in the air)
ENH: Unified the flow (a bit) for rigid and affine registration.

Revision 7738  Directory Listing
Modified Mon Oct 27 21:55:06 2008 UTC (8 years, 10 months ago) by hayes
Original Path: trunk
BUG: Added code to prevent CPack from stripping RPMs

Revision 7737  Directory Listing
Modified Fri Oct 24 19:39:14 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: add option for 64 bit developer studio

Revision 7736  Directory Listing
Modified Fri Oct 24 19:04:09 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
ENH: Assume all transformations in Slicer are modeling transformations and all linear transformations in ITK transform files are resampling transforms.  Linear transforms are inverted when going to and coming from ITK transform files.  No support for nonlinear transformations yet. Assumption that transforms in ITK transform files are modeling transforms is flawed.  This is a stop-gap until a complete coordinate frame manager can be devised.
ENH: Allow output transforms of CLI modules to modify the scene graph (move datasets to be under transformations)
BUG: removed unnecessary call to Delete() on an object managed by a SmartPointer

Revision 7735  Directory Listing
Modified Fri Oct 24 18:56:55 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: crash in PrintSelf

Revision 7734  Directory Listing
Modified Fri Oct 24 18:56:30 2008 UTC (8 years, 10 months ago) by millerjv
Original Path: trunk
BUG: reference parameter typo

Revision 7733  Directory Listing
Modified Fri Oct 24 11:16:05 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removed commented out testing stuff and marked deprecated method so we know what to whack in a final cleanup of this code

Revision 7732  Directory Listing
Modified Fri Oct 24 01:23:36 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed the upload to XND. still not great in terms of interface/usability, but logic nominally works.

Revision 7731  Directory Listing
Modified Fri Oct 24 00:23:28 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: working on XND upload

Revision 7730  Directory Listing
Modified Fri Oct 24 00:21:14 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: working on XNDHandler...

Revision 7729  Directory Listing
Modified Fri Oct 24 00:20:07 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: HTTPhandler's StageFileWrite was ignoring destination.

Revision 7728  Directory Listing
Modified Fri Oct 24 00:18:54 2008 UTC (8 years, 10 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: working on XNAT upload. This works for the metadata post; still a bug with the actual data transfer.

Revision 7727  Directory Listing
Modified Thu Oct 23 20:13:16 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
ENH: add Edited event to the mrml scene and observe it in the tree widget

Revision 7726  Directory Listing
Modified Thu Oct 23 17:37:44 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
COMP: add missing include for std::string

Revision 7725  Directory Listing
Modified Thu Oct 23 14:23:39 2008 UTC (8 years, 10 months ago) by pieper
Original Path: trunk
COMP: additional link library required for RemoteIO use within SlicerBaseGUI - for module repository

Revision 7724  Directory Listing
Modified Wed Oct 22 03:11:00 2008 UTC (8 years, 11 months ago) by tgl
Original Path: trunk
BUG bad URI

Revision 7723  Directory Listing
Modified Wed Oct 22 02:46:01 2008 UTC (8 years, 11 months ago) by tgl
Original Path: trunk
ENH adding loadable module wizard

Revision 7722  Directory Listing
Modified Wed Oct 22 02:18:26 2008 UTC (8 years, 11 months ago) by tgl
Original Path: trunk
STYLE typo column

Revision 7721  Directory Listing
Modified Tue Oct 21 17:05:22 2008 UTC (8 years, 11 months ago) by lantiga
Original Path: trunk
ENH: keep track of instance Tcl names rather than instance wrapper objects; upon deletion of an object, remove the Tcl name from the instance list; report if there are any hanging instances upon exit and eventually delete them

Revision 7719  Directory Listing
Modified Mon Oct 20 21:19:06 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
ENH: increased the default number of rows displayed in the multicolum list boxes to 5

Revision 7718  Directory Listing
Modified Mon Oct 20 21:18:08 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
STYLE: updated the help string a litte

Revision 7717  Directory Listing
Modified Sat Oct 18 01:42:45 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: removing undefined method names

Revision 7716  Directory Listing
Modified Sat Oct 18 01:41:28 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: checking in a plan for converting from and to UTF-8 encoding for parsing and posting

Revision 7715  Directory Listing
Modified Fri Oct 17 23:10:58 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
BUG: curl was protesting in StageFileWrite about the url, so try the buffer route - untested

Revision 7714  Directory Listing
Modified Fri Oct 17 23:02:37 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
STYLE: added print out of a bit more info if curl failed

Revision 7713  Directory Listing
Modified Fri Oct 17 22:57:43 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
ENH: added a check for the file name being in thelist already when call add. Use the already set uri handler instead of getting it from the scene.

Revision 7712  Directory Listing
Modified Fri Oct 17 22:45:56 2008 UTC (8 years, 11 months ago) by jvs
Original Path: trunk
ENH: Adding a new file

Revision 7711  Directory Listing
Modified Fri Oct 17 22:18:50 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
BUGFIX: parse the return file from the server when post metadata. TODO: figure out how to deal more gracefully with the utf8 encoding of the file.

Revision 7710  Directory Listing
Modified Fri Oct 17 22:14:25 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding event that can be used to pop up the RemoteDataManagerWindow

Revision 7709  Directory Listing
Modified Fri Oct 17 22:13:47 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding persistent user tags to the scene

Revision 7708  Directory Listing
Modified Fri Oct 17 20:54:39 2008 UTC (8 years, 11 months ago) by jvs
Original Path: trunk
ENH: Adding a new file

Revision 7707  Directory Listing
Modified Fri Oct 17 20:01:46 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added xnd.slicer.org to list of known servers

Revision 7706  Directory Listing
Modified Fri Oct 17 17:55:42 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: tracking down metadata post problems

Revision 7705  Directory Listing
Modified Fri Oct 17 13:02:53 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing tag text and events

Revision 7704  Directory Listing
Modified Thu Oct 16 23:50:00 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
ENH: pass the file name for which we're posting meta data, fixed the post, started parsing the return file.

Revision 7703  Directory Listing
Modified Thu Oct 16 23:48:20 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
ENH: pass the file name of the file that you are applying meta data to to the handler.

Revision 7702  Directory Listing
Modified Thu Oct 16 18:26:05 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: getting rid of <> chars in tags

Revision 7701  Directory Listing
Modified Thu Oct 16 18:25:21 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
BUG: passing the handler to PostMetadata as getting it again inside the methods was causing a safe down cast crash, added debugging printouts

Revision 7700  Directory Listing
Modified Thu Oct 16 18:24:39 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
BUG: passing the handler to PostMetadata as getting it again inside the methods was causing a safe down cast crash

Revision 7699  Directory Listing
Modified Thu Oct 16 17:29:59 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
ENH: make scripted modules (tcl, python) obey the --no-modules command line argument

Revision 7698  Directory Listing
Modified Wed Oct 15 23:10:46 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
BUG: fixing an inf loop, and path parsing, pass the responses

Revision 7697  Directory Listing
Modified Wed Oct 15 23:03:17 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Testing for required tags for XND before uploading

Revision 7696  Directory Listing
Modified Wed Oct 15 21:20:50 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding uri to PostMetadata method signature

Revision 7695  Directory Listing
Modified Wed Oct 15 21:13:37 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
BUG: redeclare i for scoping reasons

Revision 7694  Directory Listing
Modified Wed Oct 15 21:02:10 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: debugging metadata writing and uploads...

Revision 7693  Directory Listing
Modified Wed Oct 15 19:30:30 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
STYLE: fixed typo in print out

Revision 7692  Directory Listing
Modified Wed Oct 15 19:26:12 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
BUG: double fclose removal

Revision 7691  Directory Listing
Modified Wed Oct 15 15:24:28 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding ability for Logic to propagate error messages, via node, back to GUI for user

Revision 7690  Directory Listing
Modified Wed Oct 15 15:19:31 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
BUG: add in bounds checking before accessing the array

Revision 7689  Directory Listing
Modified Wed Oct 15 14:50:59 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: clearing out GUI query response panels at start of new queries

Revision 7688  Directory Listing
Modified Wed Oct 15 14:49:53 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: Clearing out old query response after parsing

Revision 7687  Directory Listing
Modified Wed Oct 15 14:38:52 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed string compare

Revision 7686  Directory Listing
Modified Wed Oct 15 13:39:49 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: using std consistently instead of mixing with vtksys_stl; adding HID query; some case-insensitive string compares; changing HID server name to new server.

Revision 7685  Directory Listing
Modified Tue Oct 14 21:56:41 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
BUG: added a call back for mult col list box editing on linux

Revision 7684  Directory Listing
Modified Tue Oct 14 21:47:26 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
BUG: added a call back for mult col list box editing on linux

Revision 7682  Directory Listing
Modified Tue Oct 14 19:49:07 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixing HIDTagTable default tags

Revision 7681  Directory Listing
Modified Tue Oct 14 19:48:28 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixing data tagging logic, mrml and gui

Revision 7680  Directory Listing
Modified Tue Oct 14 19:06:10 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
ENH: fix the model download

Revision 7679  Directory Listing
Modified Tue Oct 14 18:57:28 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
ENH: adding some error checking, debug statements

Revision 7678  Directory Listing
Modified Tue Oct 14 17:35:12 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
ENH: upload the mrml file

Revision 7676  Directory Listing
Modified Mon Oct 13 22:21:49 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Building out functionality to tag scene and data

Revision 7675  Directory Listing
Modified Mon Oct 13 22:20:36 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding a user tag table to the MRML Scene

Revision 7674  Directory Listing
Modified Mon Oct 13 22:19:53 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding user tag infrastructure to scene and storable nodes

Revision 7673  Directory Listing
Modified Mon Oct 13 21:15:50 2008 UTC (8 years, 11 months ago) by alexy
Original Path: trunk
ENH: added distance map model module

Revision 7672  Directory Listing
Modified Mon Oct 13 18:57:44 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding data description and upload functionality

Revision 7671  Directory Listing
Modified Mon Oct 13 18:57:08 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding data description and upload functionality

Revision 7670  Directory Listing
Modified Sun Oct 12 22:27:50 2008 UTC (8 years, 11 months ago) by alexy
Original Path: trunk
ENH: added distance map model module

Revision 7669  Directory Listing
Modified Sun Oct 12 18:27:24 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
ENH: add GetInput method for completeness

Revision 7668  Directory Listing
Modified Sun Oct 12 17:39:46 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: setting char pointers to null in constructor

Revision 7667  Directory Listing
Modified Sun Oct 12 17:38:45 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: continuing to build out module functionality

Revision 7666  Directory Listing
Modified Sat Oct 11 15:39:57 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: added lots of null pointer checking

Revision 7665  Directory Listing
Modified Sat Oct 11 15:19:10 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixing GUI behavior in tagtable

Revision 7664  Directory Listing
Modified Sat Oct 11 14:54:45 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed resource query

Revision 7663  Directory Listing
Modified Sat Oct 11 03:59:39 2008 UTC (8 years, 11 months ago) by tgl
Original Path: trunk
ENH Removing obsolete file.

Revision 7659  Directory Listing
Modified Fri Oct 10 22:33:32 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
BUGFIX: fixing crash due to strings not null, still leaking though

Revision 7658  Directory Listing
Modified Fri Oct 10 22:15:55 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
ENH: fleshing out logic methods, still lots to do/test.

Revision 7657  Directory Listing
Modified Fri Oct 10 22:02:50 2008 UTC (8 years, 11 months ago) by naucoin
Original Path: trunk
ENH: added some error checking, print out, copy

Revision 7656  Directory Listing
Modified Fri Oct 10 21:42:38 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed StageFileWrite/Read method signatures and added SetHostName method

Revision 7655  Directory Listing
Modified Fri Oct 10 21:32:25 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added some temporary notes in the help tab

Revision 7654  Directory Listing
Modified Fri Oct 10 19:30:50 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: change default lib dir for teem in package

Revision 7653  Directory Listing
Modified Fri Oct 10 19:02:35 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: find Teem 1.10 on windows

Revision 7652  Directory Listing
Modified Fri Oct 10 18:38:55 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Adding methods to Write Metadata for Upload

Revision 7651  Directory Listing
Modified Fri Oct 10 18:37:57 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding methods to return xml declaration and namespace info

Revision 7650  Directory Listing
Modified Fri Oct 10 18:20:29 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: don't use variable that doesn't exist

Revision 7649  Directory Listing
Modified Fri Oct 10 16:10:03 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: giving component widgets access to module logic methods

Revision 7648  Directory Listing
Modified Fri Oct 10 15:59:22 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed tag parsing and update of table in GUI

Revision 7647  Directory Listing
Modified Fri Oct 10 15:45:19 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing null pointer check when setting logic's ptr to node1

Revision 7646  Directory Listing
Modified Fri Oct 10 14:53:11 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: de-junking

Revision 7645  Directory Listing
Modified Fri Oct 10 14:51:53 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Adding FetchMI module (work in progress, keep stubbed out)

Revision 7644  Directory Listing
Modified Fri Oct 10 14:49:18 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Updating CMakeLists file to contain (stubbed out for now) FetchMI module

Revision 7643  Directory Listing
Modified Fri Oct 10 14:47:57 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding new handlers to the scene's urihandler collection

Revision 7642  Directory Listing
Modified Fri Oct 10 14:45:38 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updating tag table in storable nodes

Revision 7641  Directory Listing
Modified Fri Oct 10 14:44:02 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Adding table classes to contain att/val pairs from parsing xml

Revision 7640  Directory Listing
Modified Fri Oct 10 14:41:24 2008 UTC (8 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Adding classes to transact with XNAT Desktop and BIRN HID webservices

Revision 7639  Directory Listing
Modified Thu Oct 9 22:46:28 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: wrong output type for the cast for this combination

Revision 7638  Directory Listing
Modified Thu Oct 9 22:15:18 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
ENH: infrastructure for new distance transform filter

Revision 7637  Directory Listing
Modified Thu Oct 9 21:15:06 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: bad access to slice gui with no check on return value\!

Revision 7636  Directory Listing
Modified Thu Oct 9 19:42:19 2008 UTC (8 years, 11 months ago) by millerjv
Original Path: trunk
ENH: Added new colormaps in complementary pairs: Red/Cyan, Green/Magenta, Warm1/Cool1, WarmShade1/CoolShade1, WarmTint1/CoolTint1. When layered (FG/BG), these colormaps will produce grey when the values of FG/BG match and a color when they do not not.
ENH: Added new compositing mode for FG/BG.  Can now chose between Alpha blend, Add, Subtract (though Subtract requires a bit more vis work to be useful).

Revision 7635  Directory Listing
Modified Wed Oct 8 21:41:15 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: turn off pthreads for teems to avoid error from cmake

Revision 7634  Directory Listing
Modified Wed Oct 8 21:35:44 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: fix typo in windows branch and override complaints about unkown site certificate from https access to sourceforge svn

Revision 7633  Directory Listing
Modified Wed Oct 8 20:48:42 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
ENH: switch to teem sourceforge svn trunk in preparation for use of new features such as python wrapping and two tensor tractography

Revision 7632  Directory Listing
Modified Tue Oct 7 18:28:55 2008 UTC (8 years, 11 months ago) by yumin
Original Path: trunk
BUG: Added some logic in save data widget to handle if the URL is not set yet in the scene; 
BUG: Removed dicom from the supported file format in save data widget since this format will need more specifications, and Slicer has other ways to save out dicom files; 
DOC: Some minor changes for text displayed in the file format dropdown box of certain storage nodes.

Revision 7631  Directory Listing
Modified Tue Oct 7 13:44:16 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
STYLE: remove dead code

Revision 7630  Directory Listing
Modified Mon Oct 6 20:32:22 2008 UTC (8 years, 11 months ago) by alexy
Original Path: trunk
ENH: fixed glyp on slices display

Revision 7629  Directory Listing
Modified Mon Oct 6 19:35:28 2008 UTC (8 years, 11 months ago) by hliu
Original Path: trunk
ENH: Turned on OpenIGTLink and NeuroNav modules.

Revision 7628  Directory Listing
Modified Sat Oct 4 20:43:38 2008 UTC (8 years, 11 months ago) by alexy
Original Path: trunk
ENH: added seeding from model points

Revision 7627  Directory Listing
Modified Fri Oct 3 20:03:30 2008 UTC (8 years, 11 months ago) by yumin
Original Path: trunk
ENH: Minor. Some button tooltips changes

Revision 7626  Directory Listing
Modified Fri Oct 3 19:55:08 2008 UTC (8 years, 11 months ago) by yumin
Original Path: trunk
ENH: Implementation of SaveDataWidget Draft#5 (http://www.slicer.org/slicerWiki/index.php/User:Barre/TODO#Draft5)

Revision 7625  Directory Listing
Modified Thu Oct 2 21:36:13 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: implement virtual method to tell users of this class that input is null so image pipeline cannot be updated

Revision 7624  Directory Listing
Modified Thu Oct 2 16:17:52 2008 UTC (8 years, 11 months ago) by yumin
Original Path: trunk
BUG: Fixed the problem that if a mrml node's existing file format is not supported, we still need to expose the writable file formats for this node. Also, added some error checking code before the MRMLSaveDataWidget undergoes another round of GUI changes.

Revision 7623  Directory Listing
Modified Wed Oct 1 19:50:24 2008 UTC (8 years, 11 months ago) by alexy
Original Path: trunk
ENH: fixed reading data in the snapshots

Revision 7622  Directory Listing
Modified Tue Sep 30 14:56:17 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
COMP: support mac lapack build and force copy of lapack lib when rebuilding

Revision 7621  Directory Listing
Modified Tue Sep 30 02:16:25 2008 UTC (8 years, 11 months ago) by nicky
Original Path: trunk
ENH:correct naming convention (VolumeRenderingCudaModule -> VolumeRenderingCuda)

Revision 7620  Directory Listing
Modified Sun Sep 28 16:59:47 2008 UTC (8 years, 11 months ago) by alexy
Original Path: trunk
ENH: removed dependency on DisplayProperty node for DTI volumes

Revision 7619  Directory Listing
Modified Sat Sep 27 19:47:43 2008 UTC (8 years, 11 months ago) by lorensen
Original Path: trunk
COMP: gcc4.3 warnings.

Revision 7618  Directory Listing
Modified Sat Sep 27 19:47:29 2008 UTC (8 years, 11 months ago) by lorensen
Original Path: trunk
COMP: gcc4.3 warnings.

Revision 7617  Directory Listing
Modified Sat Sep 27 19:46:57 2008 UTC (8 years, 11 months ago) by lorensen
Original Path: trunk
COMP: gcc4.3 warnings.

Revision 7616  Directory Listing
Modified Sat Sep 27 19:45:49 2008 UTC (8 years, 11 months ago) by lorensen
Original Path: trunk
ENH: the start of ctest scripts for building Slicer3/

Revision 7615  Directory Listing
Modified Sat Sep 27 19:45:16 2008 UTC (8 years, 11 months ago) by lorensen
Original Path: trunk
ENH: the start of ctest scripts for building Slicer3/

Revision 7614  Directory Listing
Modified Sat Sep 27 18:52:41 2008 UTC (8 years, 11 months ago) by lorensen
Original Path: trunk
COMP: the registration tests are failing with the initial transforms in Testing/Data/Input.

Revision 7613  Directory Listing
Modified Sat Sep 27 18:18:08 2008 UTC (8 years, 11 months ago) by lorensen
Original Path: trunk
BUG: TestGridTransformRegistrationTest was not run properly.

Revision 7612  Directory Listing
Modified Sat Sep 27 17:50:17 2008 UTC (8 years, 11 months ago) by lorensen
Original Path: trunk
BUG: if _flag length is 0, illegal access of _flag[0].

Revision 7611  Directory Listing
Modified Sat Sep 27 14:57:40 2008 UTC (8 years, 11 months ago) by lorensen
Original Path: trunk
BUG: Missing include directory.

Revision 7610  Directory Listing
Modified Fri Sep 26 19:58:21 2008 UTC (8 years, 11 months ago) by yumin
Original Path: trunk
ENH: Modified the mrml save dialog with the new design and functionalities. Here is the detail: http://www.slicer.org/slicerWiki/index.php/User:Barre/TODO

Revision 7609  Directory Listing
Modified Fri Sep 26 15:33:52 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
ENH: new python module from Demian Wassermann

Revision 7608  Directory Listing
Modified Fri Sep 26 12:47:16 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
ENH: add locked attribute to Fiducial lists and Fiducial/Seed SliceWidgets

Revision 7607  Directory Listing
Modified Fri Sep 26 07:27:45 2008 UTC (8 years, 11 months ago) by nicky
Original Path: trunk
ENH:remove unused vtkKWTypeChooserBox

Revision 7606  Directory Listing
Modified Thu Sep 25 23:35:49 2008 UTC (8 years, 11 months ago) by lorensen
Original Path: trunk
COMP: std::replace requires #include <algorithm>.

Revision 7605  Directory Listing
Modified Thu Sep 25 20:21:45 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: fix pan/zoom of non-scalar types

Revision 7604  Directory Listing
Modified Thu Sep 25 19:27:45 2008 UTC (8 years, 11 months ago) by barre
Original Path: trunk
ENH: add extension support for the installer (.mrml and .xcat), fix the Python install (remember, not everybody is using getbuildtest.tcl, i.e. some people provide their own goold-old Python)

Revision 7603  Directory Listing
Modified Thu Sep 25 19:26:44 2008 UTC (8 years, 11 months ago) by barre
Original Path: trunk
ENH: use the Win32 launcher on Win64 platform until Steve creates a new one. Not that it actually is needed :)

Revision 7602  Directory Listing
Modified Wed Sep 24 21:40:40 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: catch bad read of volume data and delete reader

Revision 7601  Directory Listing
Modified Wed Sep 24 09:17:10 2008 UTC (8 years, 11 months ago) by nicky
Original Path: trunk
ENH:delete unused FindCuda.cmake

Revision 7600  Directory Listing
Modified Mon Sep 22 15:31:06 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: implement virtual method to correctly return NULL image data when input to pipeline is NULL

Revision 7599  Directory Listing
Modified Mon Sep 22 15:26:10 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: only allow scalar volume nodes to be used as reference volumes for creating label maps

Revision 7598  Directory Listing
Modified Mon Sep 22 15:23:34 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: set all readers and storage nodes to use native origin by default to be consistent with GUI and to work correctly for non-centered data going to command line modules

Revision 7597  Directory Listing
Modified Mon Sep 22 14:46:12 2008 UTC (8 years, 11 months ago) by pieper
Original Path: trunk
BUG: only call update on pipeline if input data is non-NULL

Revision 7596  Directory Listing
Modified Sun Sep 21 22:57:27 2008 UTC (8 years, 11 months ago) by alexy
Original Path: trunk
ENH: fixed crash on exit due to unitilized variables

Revision 7595  Directory Listing
Modified Fri Sep 19 15:11:59 2008 UTC (9 years ago) by hyang
Original Path: trunk
ENH: Enable user to specify a color for each leaf node of the anatomical tree (step 2 of EMSegment). Add some GUI components to vtkEMSegmentAnatomicalStructureStep. Add XML IO of colormap parameter to vtkMRMLEMSGlobalParametersNode and vtkEMSegmentMRMLManager.

Revision 7594  Directory Listing
Modified Thu Sep 18 18:39:12 2008 UTC (9 years ago) by pieper
Original Path: trunk
COMP: fix python building to use the latest fortran compilers on linux by default

Revision 7593  Directory Listing
Modified Thu Sep 18 18:19:50 2008 UTC (9 years ago) by pieper
Original Path: trunk
COMP: add TCL_VERSION and FORTRAN_COMPILER variables to control build

Revision 7592  Directory Listing
Modified Thu Sep 18 15:47:11 2008 UTC (9 years ago) by yumin
Original Path: trunk
ENH: Added a helper class to handle ITK image file formats related helper functions. This helper class also contains a temporary table for the itkImageIO supported write file types. Once we have implemented the supported-read/wirte-filetype APIs in itkImageIO classes, the code should be updated to use those APIs, instead of this table.

Revision 7591  Directory Listing
Modified Wed Sep 17 23:13:24 2008 UTC (9 years ago) by barre
Original Path: trunk
ENH: moved from Sandbox

Revision 7590  Directory Listing
Modified Wed Sep 17 23:13:18 2008 UTC (9 years ago) by barre
Original Path: trunk
ENH: moved from Sandbox

Revision 7589  Directory Listing
Modified Wed Sep 17 22:59:01 2008 UTC (9 years ago) by barre
Original Path: trunk
ENH: move experimental module BuildSystem macros from the Sandbox to Slcier

Revision 7588  Directory Listing
Modified Wed Sep 17 22:12:17 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: fix vtkIdType to python dataType conversion calculation

Revision 7587  Directory Listing
Modified Wed Sep 17 19:20:45 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added names to all uriHandlers

Revision 7586  Directory Listing
Modified Wed Sep 17 19:15:20 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added methods for getting a known type of URI handler by its name

Revision 7585  Directory Listing
Modified Wed Sep 17 19:14:26 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updates for supporting user tags on storable data as part of informatics infrastructure

Revision 7584  Directory Listing
Modified Tue Sep 16 20:45:43 2008 UTC (9 years ago) by alexy
Original Path: trunk
ENH: added DistanceMapFiducials mofule

Revision 7583  Directory Listing
Modified Tue Sep 16 04:06:55 2008 UTC (9 years ago) by nicky
Original Path: trunk
ENH:FindCuda.cmake works on Mac OS X and Linux Fedora 8

Revision 7582  Directory Listing
Modified Tue Sep 16 01:03:20 2008 UTC (9 years ago) by nicky
Original Path: trunk
BUG:uncomment TESTING in CudaSupport CMakeLists.txt

Revision 7581  Directory Listing
Modified Mon Sep 15 20:41:52 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: optionally add id of parameter node to a python module

Revision 7580  Directory Listing
Modified Sun Sep 14 14:33:09 2008 UTC (9 years ago) by demian
Original Path: trunk
ENH: Removing unnecessary functionality from the vtkMRMLGlyphableVolumeDisplayNode, now allowing Glyphable volumes to be properly loaded from TCL or Python scripts

Revision 7579  Directory Listing
Modified Sat Sep 13 01:36:09 2008 UTC (9 years ago) by nicky
Original Path: trunk
ENH:integrate FindCuda.cmake

Revision 7578  Directory Listing
Modified Sat Sep 13 01:35:21 2008 UTC (9 years ago) by nicky
Original Path: trunk
BUG:include stdlib.h to CudappMemoryBase.h

Revision 7577  Directory Listing
Modified Sat Sep 13 01:34:25 2008 UTC (9 years ago) by nicky
Original Path: trunk
BUG:remove CUDA_renderAlgo.h from include list

Revision 7576  Directory Listing
Modified Fri Sep 12 17:39:46 2008 UTC (9 years ago) by hliu
Original Path: trunk
ENH: put NeuroNav module back into the Module directory.

Revision 7575  Directory Listing
Modified Fri Sep 12 17:38:46 2008 UTC (9 years ago) by hliu
Original Path: trunk
ENH: put OpenIGTLink module back into the Module directory.

Revision 7574  Directory Listing
Modified Thu Sep 11 17:53:56 2008 UTC (9 years ago) by alexy
Original Path: trunk
ENH: added module load selection

Revision 7573  Directory Listing
Modified Thu Sep 11 17:32:02 2008 UTC (9 years ago) by naucoin
Original Path: trunk
ENH: use the model display node's Selected flag to change the actor's properties, adding a checkbutton to toggle it in the model display widget

Revision 7572  Directory Listing
Modified Thu Sep 11 16:55:48 2008 UTC (9 years ago) by naucoin
Original Path: trunk
ENH: add a selected specular value, to be adjusted later after user feedback

Revision 7571  Directory Listing
Modified Thu Sep 11 14:58:01 2008 UTC (9 years ago) by naucoin
Original Path: trunk
STYLE: warning to debug, can do w/o warning that can't remove a cache file that's not there

Revision 7570  Directory Listing
Modified Wed Sep 10 22:24:04 2008 UTC (9 years ago) by naucoin
Original Path: trunk
ENH: if the storage node has a list of files, initiate more than one transfer. Also, moved setting the task type after the check for a null task

Revision 7569  Directory Listing
Modified Wed Sep 10 22:20:36 2008 UTC (9 years ago) by naucoin
Original Path: trunk
ENH: set up the URI list

Revision 7568  Directory Listing
Modified Wed Sep 10 22:19:58 2008 UTC (9 years ago) by naucoin
Original Path: trunk
STYLE: took out an extra print out

Revision 7567  Directory Listing
Modified Wed Sep 10 21:52:20 2008 UTC (9 years ago) by naucoin
Original Path: trunk
BUG: was off by one on the string comparisons

Revision 7566  Directory Listing
Modified Wed Sep 10 17:52:08 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: brought choose module menu button's text back -- replaced AddCommand with AddRadioButton

Revision 7565  Directory Listing
Modified Wed Sep 10 15:54:29 2008 UTC (9 years ago) by nicky
Original Path: trunk
BUG:modify CMakeLists.txt so that cmake does not stop when CUDA_INSTALL_PREFIX is not set

Revision 7561  Directory Listing
Modified Tue Sep 9 21:22:46 2008 UTC (9 years ago) by alexy
Original Path: trunk
ENH: added vtkKWCheckBoxSelectionDialog

Revision 7560  Directory Listing
Modified Tue Sep 9 20:23:26 2008 UTC (9 years ago) by pieper
Original Path: trunk
COMP: turn off python by default and set a default fortran compiler

Revision 7559  Directory Listing
Modified Tue Sep 9 20:16:35 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: keep track of wrapped instances so they can be deleted before finalizing

Revision 7558  Directory Listing
Modified Tue Sep 9 18:29:56 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed two bugs that came from sending a float instead of an int in the parameter list of a method. explicitly converting to an int using scan command in Tcl

Revision 7557  Directory Listing
Modified Tue Sep 9 16:26:53 2008 UTC (9 years ago) by pieper
Original Path: trunk
COMP: disable cuda - it's not building correctly on all platforms

Revision 7556  Directory Listing
Modified Tue Sep 9 16:12:55 2008 UTC (9 years ago) by pieper
Original Path: trunk
COMP: enable NUMPY by default when Python is on

Revision 7555  Directory Listing
Modified Tue Sep 9 15:50:16 2008 UTC (9 years ago) by nicky
Original Path: trunk
ENH:added VolumeRenderingCuda into CMakeLists.txt

Revision 7554  Directory Listing
Modified Tue Sep 9 15:49:47 2008 UTC (9 years ago) by nicky
Original Path: trunk
ENH:added CudaSupport to CMakeLists.txt

Revision 7553  Directory Listing
Modified Tue Sep 9 15:44:24 2008 UTC (9 years ago) by lantiga
Original Path: trunk
BUG: While scanning for a valid ScriptedModuleGUI subclass, avoid ScriptedModuleGUI itself

Revision 7552  Directory Listing
Modified Tue Sep 9 15:42:03 2008 UTC (9 years ago) by nicky
Original Path: trunk
ENH:added cuda CMake scripts

Revision 7551  Directory Listing
Modified Tue Sep 9 15:30:19 2008 UTC (9 years ago) by nicky
Original Path: trunk
ENH:added VolumeRenderingCuda module

Revision 7550  Directory Listing
Modified Tue Sep 9 15:23:29 2008 UTC (9 years ago) by lantiga
Original Path: trunk
BUG: fixed and then commented out Enter and Exit methods, since they create troubles with Python scripted modules. Will have to be fixed shortly, but Python scripted modules can do without for the time being.

Revision 7549  Directory Listing
Modified Tue Sep 9 15:08:25 2008 UTC (9 years ago) by nicky
Original Path: trunk
ENH:added CudaSupport libs

Revision 7548  Directory Listing
Modified Tue Sep 9 14:42:52 2008 UTC (9 years ago) by pieper
Original Path: trunk
BUG: add a vtkTriangleFilter to the pipeline when saving an STL model since STL only supports triangles (not triangle strips as created by the model maker

Revision 7547  Directory Listing
Modified Mon Sep 8 20:48:24 2008 UTC (9 years ago) by pieper
Original Path: trunk
BUG: include numpy lib path in environment

Revision 7546  Directory Listing
Modified Mon Sep 8 20:46:38 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: use two methods for wrapping variable number of arguments rather than using optional argument (this maintains backward compatibility)

Revision 7545  Directory Listing
Modified Mon Sep 8 20:42:28 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: supply the fileList of extra files that should be considered as part of volume

Revision 7544  Directory Listing
Modified Mon Sep 8 18:21:04 2008 UTC (9 years ago) by naucoin
Original Path: trunk
ENH: use a const char for the file name

Revision 7543  Directory Listing
Modified Mon Sep 8 18:20:22 2008 UTC (9 years ago) by naucoin
Original Path: trunk
ENH: save the list of files that the vtkITKArchetypeImageSeriesReader keeps in the storage node. Also put in support for a list of URI's. In MRML the files are written out using an index to avoid complaints about duplicate tags.

Revision 7542  Directory Listing
Modified Mon Sep 8 18:16:33 2008 UTC (9 years ago) by naucoin
Original Path: trunk
ENH: add an optional string array of file names to pass to the storage node

Revision 7541  Directory Listing
Modified Mon Sep 8 17:26:22 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: fixes for python build issues

Revision 7540  Directory Listing
Modified Fri Sep 5 21:46:51 2008 UTC (9 years ago) by davisb
Original Path: trunk
BUG: fix typo in slicer_variables: libs were put in Slicer_build

Revision 7539  Directory Listing
Modified Fri Sep 5 21:31:19 2008 UTC (9 years ago) by davisb
Original Path: trunk
ENH: add extra command-line functionality to getbuildtest: --no-slicer-update and --build-dir

Revision 7538  Directory Listing
Modified Fri Sep 5 19:20:39 2008 UTC (9 years ago) by pieper
Original Path: trunk
COMP: build libraries needed for lapack, which is needed for scipy

Revision 7537  Directory Listing
Modified Fri Sep 5 18:55:08 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: extra infrastructure for building scipy

Revision 7536  Directory Listing
Modified Fri Sep 5 18:51:22 2008 UTC (9 years ago) by naucoin
Original Path: trunk
BUG: added error checking and returning

Revision 7535  Directory Listing
Modified Fri Sep 5 18:38:52 2008 UTC (9 years ago) by naucoin
Original Path: trunk
BUG: return 1 if succeed on read, 0 if fail

Revision 7534  Directory Listing
Modified Fri Sep 5 15:17:52 2008 UTC (9 years ago) by davisb
Original Path: trunk
ENH: add extra output to testing template

Revision 7533  Directory Listing
Modified Fri Sep 5 14:31:29 2008 UTC (9 years ago) by lantiga
Original Path: trunk
ENH: Committing the sample Python scripted module code back

Revision 7532  Directory Listing
Modified Fri Sep 5 13:05:11 2008 UTC (9 years ago) by pieper
Original Path: trunk
BUG: handle missing dicom tags cleanly so load volume gui does not hang

Revision 7531  Directory Listing
Modified Thu Sep 4 22:22:18 2008 UTC (9 years ago) by lorensen
Original Path: trunk
COMP: gcc warnings.

Revision 7530  Directory Listing
Modified Thu Sep 4 22:22:06 2008 UTC (9 years ago) by lorensen
Original Path: trunk
COMP: gcc warnings.

Revision 7529  Directory Listing
Modified Thu Sep 4 17:57:05 2008 UTC (9 years ago) by francois_budin
Original Path: trunk
BUG: Correction of a problem when using a reference image with a transform in the RAS space

Revision 7528  Directory Listing
Modified Thu Sep 4 17:55:07 2008 UTC (9 years ago) by francois_budin
Original Path: trunk
BUG: Correction of a problem when using a reference image with a transform in the RAS space

Revision 7527  Directory Listing
Modified Thu Sep 4 15:30:49 2008 UTC (9 years ago) by lantiga
Original Path: trunk
ENH: improved Numpy interface with methods to convert a ndarray to vtkImageData or vtkDataArray; improved exception handling for Python modules; added a new NumpyScript command line module to make Numpy experimentation handier

Revision 7526  Directory Listing
Modified Wed Sep 3 19:36:39 2008 UTC (9 years ago) by alexy
Original Path: trunk
ENH: added model info widget

Revision 7525  Directory Listing
Modified Wed Sep 3 14:31:20 2008 UTC (9 years ago) by alexy
Original Path: trunk
ENH: fixed event propogation for a new volume in the scene snapshot

Revision 7524  Directory Listing
Modified Tue Sep 2 19:20:05 2008 UTC (9 years ago) by alexy
Original Path: trunk
ENH: reverted changes that broke the fiducial seeding

Revision 7521  Directory Listing
Modified Fri Aug 29 16:35:42 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: newly created versions to match the sun version

Revision 7520  Directory Listing
Modified Fri Aug 29 16:07:54 2008 UTC (9 years ago) by naucoin
Original Path: trunk
COMP: removing unused vars, use of const char

Revision 7519  Directory Listing
Modified Fri Aug 29 15:44:58 2008 UTC (9 years ago) by naucoin
Original Path: trunk
COMP: set button parent to null before deleting

Revision 7518  Directory Listing
Modified Thu Aug 28 22:57:38 2008 UTC (9 years ago) by naucoin
Original Path: trunk
COMP: fixing compiler warnings, removed some asserts

Revision 7517  Directory Listing
Modified Thu Aug 28 22:37:43 2008 UTC (9 years ago) by naucoin
Original Path: trunk
COMP: clearing up compiler warnings

Revision 7516  Directory Listing
Modified Thu Aug 28 21:58:54 2008 UTC (9 years ago) by naucoin
Original Path: trunk
COMP: removing unused vars

Revision 7515  Directory Listing
Modified Thu Aug 28 21:47:24 2008 UTC (9 years ago) by naucoin
Original Path: trunk
COMP: removing unused var

Revision 7514  Directory Listing
Modified Thu Aug 28 18:35:40 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: checking in forgotten files for BillsBasement build warnings fix

Revision 7513  Directory Listing
Modified Thu Aug 28 18:25:31 2008 UTC (9 years ago) by naucoin
Original Path: trunk
ENH: add alternate colours for the selected state

Revision 7512  Directory Listing
Modified Thu Aug 28 18:22:22 2008 UTC (9 years ago) by naucoin
Original Path: trunk
BUG: take out Selected, it's in the base class now

Revision 7511  Directory Listing
Modified Thu Aug 28 18:11:56 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: changed warning output to a warning macro instead of error macro

Revision 7510  Directory Listing
Modified Thu Aug 28 17:40:02 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: changed some (non-error) messages to not sound like error messages in tkcon

Revision 7509  Directory Listing
Modified Thu Aug 28 17:20:28 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: made some changes to get rid of pesky Build warnings reported on BillsBasement

Revision 7508  Directory Listing
Modified Thu Aug 28 17:17:29 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: changed vtkMRMLROINode's Selected flag type to match the new change in vtkMRMLNode to get rid of a compile error on win32.

Revision 7507  Directory Listing
Modified Thu Aug 28 15:46:23 2008 UTC (9 years ago) by naucoin
Original Path: trunk
COMP: reducing compiler warnings

Revision 7506  Directory Listing
Modified Thu Aug 28 15:41:56 2008 UTC (9 years ago) by naucoin
Original Path: trunk
COMP: reducing compiler warnings

Revision 7505  Directory Listing
Modified Thu Aug 28 15:36:27 2008 UTC (9 years ago) by naucoin
Original Path: trunk
COMP: reducing compiler warnings

Revision 7504  Directory Listing
Modified Thu Aug 28 15:35:31 2008 UTC (9 years ago) by naucoin
Original Path: trunk
COMP: reducing compiler warnings

Revision 7503  Directory Listing
Modified Thu Aug 28 14:50:47 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: add created launcher to repository

Revision 7502  Directory Listing
Modified Thu Aug 28 14:41:23 2008 UTC (9 years ago) by naucoin
Original Path: trunk
ENH: add Selected flag to mrml nodes

Revision 7501  Directory Listing
Modified Wed Aug 27 21:03:39 2008 UTC (9 years ago) by alexy
Original Path: trunk
BUG-FIXED: fixed update in 3D viewer on slice blend change. Fixed removing texture in 3d view on node deletion

Revision 7500  Directory Listing
Modified Wed Aug 27 20:42:21 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added lightbox options to compare viewer setup

Revision 7499  Directory Listing
Modified Wed Aug 27 20:40:44 2008 UTC (9 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added lightbox options to compare viewer setup

Revision 7498  Directory Listing
Modified Wed Aug 27 19:42:04 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: New scripted module framework for defining module to create fidicuals at a distance around a label map

Revision 7497  Directory Listing
Modified Wed Aug 27 17:01:51 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: clone proc to quickly create a scripted module instance by copying the example

Revision 7496  Directory Listing
Modified Wed Aug 27 15:50:54 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: enable creation of new node in output node selector

Revision 7495  Directory Listing
Modified Wed Aug 27 15:47:46 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: Allow scripting of enter/exit methods

Revision 7494  Directory Listing
Modified Wed Aug 27 15:43:40 2008 UTC (9 years ago) by pieper
Original Path: trunk
BUG: fix typo in example

Revision 7493  Directory Listing
Modified Wed Aug 27 15:42:16 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: enable scripted module example

Revision 7492  Directory Listing
Modified Wed Aug 27 15:25:49 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: new scripted module example to use as starting point for new modules

Revision 7491  Directory Listing
Modified Wed Aug 27 15:20:11 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: add category support

Revision 7490  Directory Listing
Modified Wed Aug 27 11:57:13 2008 UTC (9 years ago) by davisb
Original Path: trunk
ENH: if the user wants a continuous test dont update until the test starts

Revision 7489  Directory Listing
Modified Tue Aug 26 20:39:02 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: workaround for solaris/gcc library issue (thanks to Attila Nagy)

Revision 7488  Directory Listing
Modified Tue Aug 26 17:35:37 2008 UTC (9 years ago) by pieper
Original Path: trunk
COMP: hooks for numpy/scipy compilation

Revision 7487  Directory Listing
Modified Tue Aug 26 01:19:18 2008 UTC (9 years ago) by alexy
Original Path: trunk
ENH: fixed the superclass bug in the volume hierarchy and the ripples

Revision 7486  Directory Listing
Modified Mon Aug 25 17:46:15 2008 UTC (9 years ago) by davisb
Original Path: trunk
ENH: update documentation

Revision 7485  Directory Listing
Modified Mon Aug 25 17:39:24 2008 UTC (9 years ago) by davisb
Original Path: trunk
ENH: update documentation

Revision 7484  Directory Listing
Modified Sun Aug 24 15:05:26 2008 UTC (9 years ago) by pieper
Original Path: trunk
BUG: work around issue where some nodes do not respond to the GetName method because they are not properly wrapped in MRML

Revision 7483  Directory Listing
Modified Fri Aug 22 19:56:21 2008 UTC (9 years ago) by pieper
Original Path: trunk
STYLE documentation and indents

Revision 7482  Directory Listing
Modified Fri Aug 22 19:55:03 2008 UTC (9 years ago) by pieper
Original Path: trunk
BUG: extra checks to find gdcm's dicom dictionary

Revision 7481  Directory Listing
Modified Fri Aug 22 17:44:44 2008 UTC (9 years ago) by naucoin
Original Path: trunk
BUGFIX: avoid inf loops by checking for empty string at eol

Revision 7480  Directory Listing
Modified Fri Aug 22 17:20:03 2008 UTC (9 years ago) by naucoin
Original Path: trunk
BUGFIX: deal with spaces in fiducial label strings

Revision 7479  Directory Listing
Modified Fri Aug 22 15:40:02 2008 UTC (9 years ago) by pieper
Original Path: trunk
BUG: fix parameter handling for label index

Revision 7478  Directory Listing
Modified Fri Aug 22 14:57:11 2008 UTC (9 years ago) by pieper
Original Path: trunk
ENH: detect non-short label maps and cast them to short

Revision 7477  Directory Listing
Modified Thu Aug 21 21:33:32 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: trim any question marks and trailing chars from a uri

Revision 7476  Directory Listing
Modified Thu Aug 21 20:48:20 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: make reset method public and add documentation

Revision 7475  Directory Listing
Modified Thu Aug 21 15:04:29 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
ENH: make a couple of functions public so other class can access FileNames.

Revision 7474  Directory Listing
Modified Thu Aug 21 13:34:44 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
BUG: Fixed bug 272 (http://na-mic.org/Mantis/view.php?id=272). Some image information (slice thickness and image orientation patient) were not set correctly.

Revision 7473  Directory Listing
Modified Thu Aug 21 03:09:37 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
ENH: added new function const char* GetFileName( unsigned int n ).

Revision 7472  Directory Listing
Modified Thu Aug 21 01:11:48 2008 UTC (9 years, 1 month ago) by aylward
Original Path: trunk
BUG: slicer


Revision 7471  Directory Listing
Modified Wed Aug 20 21:32:10 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: allow .gz files as volumes

Revision 7470  Directory Listing
Modified Wed Aug 20 19:59:41 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: make add volume dialog modal and centered on slicer main window

Revision 7469  Directory Listing
Modified Tue Aug 19 22:33:04 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
STYLE: remove debug prints

Revision 7468  Directory Listing
Modified Tue Aug 19 22:31:45 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: don't generate dialog box when data is not aligned - prevented switching between tools

Revision 7467  Directory Listing
Modified Tue Aug 19 22:30:00 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: allow background with different datatype than label image

Revision 7466  Directory Listing
Modified Tue Aug 19 22:18:48 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: disable RegisterImages while sorting out windows cmake/cpack issue

Revision 7464  Directory Listing
Modified Tue Aug 19 20:43:36 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added 1x6 and 1x8 options to Lightbox config menu

Revision 7463  Directory Listing
Modified Tue Aug 19 20:39:50 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: fix issue with pixel of floating point return value

Revision 7462  Directory Listing
Modified Tue Aug 19 20:33:50 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: fix label parameter issue with ChangeIslandEffect

Revision 7461  Directory Listing
Modified Tue Aug 19 19:22:20 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed bug causing a crash when a scene snapshot was cancelled and at least one fiducial was present. Somehow the NodeRemoved event on the snapshot was being reinterpreted by the FiducialListWidget and cast as a vtkMRMLFiducialListNode.

Revision 7460  Directory Listing
Modified Tue Aug 19 15:14:02 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: extra documentation, improved display of dicom information in tree

Revision 7459  Directory Listing
Modified Mon Aug 18 18:25:01 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: caught request for OneUpSliceView and assigned layout to Red if no viewer specified. Also moved some refinements made in the release branch into this.

Revision 7458  Directory Listing
Modified Mon Aug 18 18:23:01 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removed chatty status text for Node Added and Node Removed events

Revision 7457  Directory Listing
Modified Mon Aug 18 18:22:20 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: included a null pointer check

Revision 7456  Directory Listing
Modified Mon Aug 18 18:21:53 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removed LayoutNode's 'oldLayout' state

Revision 7455  Directory Listing
Modified Mon Aug 18 14:09:59 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removed debug leaks caused by restoring or deleting a scene snapshot

Revision 7454  Directory Listing
Modified Mon Aug 18 14:00:42 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removed extra observer on scene snapshot button

Revision 7453  Directory Listing
Modified Mon Aug 18 01:57:49 2008 UTC (9 years, 1 month ago) by blezek
Original Path: trunk
ENH: Make Python an option

Revision 7452  Directory Listing
Modified Sun Aug 17 22:08:13 2008 UTC (9 years, 1 month ago) by aylward
Original Path: trunk
BUG: Disabled testing and removed ability to change metric type


Revision 7451  Directory Listing
Modified Sat Aug 16 17:31:44 2008 UTC (9 years, 1 month ago) by alexy
Original Path: trunk
ENH: fixed FiducialSeeding to save/restore parameters

Revision 7450  Directory Listing
Modified Sat Aug 16 01:38:30 2008 UTC (9 years, 1 month ago) by alexy
Original Path: trunk
ENH: added translation limits to transform editor

Revision 7449  Directory Listing
Modified Fri Aug 15 23:42:06 2008 UTC (9 years, 1 month ago) by pohl
Original Path: trunk
BUG: Took out all the print outs of temporary results

Revision 7448  Directory Listing
Modified Fri Aug 15 23:41:29 2008 UTC (9 years, 1 month ago) by pohl
Original Path: trunk
BUG: Took out all the print outs of temporary results

Revision 7447  Directory Listing
Modified Fri Aug 15 15:21:29 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: apply Dan's patches for using system python on mac

Revision 7446  Directory Listing
Modified Fri Aug 15 02:25:54 2008 UTC (9 years, 1 month ago) by pohl
Original Path: trunk
BUG: Not needed anymore

Revision 7445  Directory Listing
Modified Fri Aug 15 02:24:10 2008 UTC (9 years, 1 month ago) by pohl
Original Path: trunk
BUG: Not needed anymore

Revision 7444  Directory Listing
Modified Fri Aug 15 02:22:49 2008 UTC (9 years, 1 month ago) by pohl
Original Path: trunk
BUG: Not needed anymore

Revision 7438  Directory Listing
Modified Thu Aug 14 16:50:59 2008 UTC (9 years, 1 month ago) by demian
Original Path: trunk
BUG: Fixed numpy compatibility issues with Luca's new python interface

Revision 7437  Directory Listing
Modified Thu Aug 14 16:30:07 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
ENH: Is this an ENH!? Content time may not be a good field to separate sub sequences.

Revision 7436  Directory Listing
Modified Thu Aug 14 15:10:18 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: save loading options in registry and allow reset of recent files from menu

Revision 7435  Directory Listing
Modified Thu Aug 14 13:33:53 2008 UTC (9 years, 1 month ago) by aylward
Original Path: trunk
BUG: Something changed in how slicer does commandline image passing to dlls


Revision 7434  Directory Listing
Modified Thu Aug 14 13:14:19 2008 UTC (9 years, 1 month ago) by aylward
Original Path: trunk
BUG: Commented out code that requires cvs head


Revision 7433  Directory Listing
Modified Thu Aug 14 10:42:21 2008 UTC (9 years, 1 month ago) by aylward
Original Path: trunk
ENH: Sync'ing with version in main repository


Revision 7431  Directory Listing
Modified Thu Aug 14 03:03:37 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
ENH: By default, assemble a volume that containing Archetype.

Revision 7430  Directory Listing
Modified Wed Aug 13 21:42:06 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: revert mistaken checkin that has debug statement

Revision 7429  Directory Listing
Modified Wed Aug 13 21:40:34 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: improved layout and functionality of File->Add Volume... dialog.  Now it tracks the 15 most recently used files.  Also the new layout should be friendlier for smaller screens.

Revision 7428  Directory Listing
Modified Wed Aug 13 18:04:36 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: add dicom directory structure caching and extra cleanup to volume loader

Revision 7427  Directory Listing
Modified Tue Aug 12 22:11:24 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
BUG-FIX: take out the crop settings of the SPLPNL-Atlas node

Revision 7426  Directory Listing
Modified Tue Aug 12 20:48:24 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
ENH: added the SPL PNL atlas transfer function as a preset

Revision 7425  Directory Listing
Modified Tue Aug 12 20:08:21 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: hopefully fixed crash when restoring null layout from registry

Revision 7424  Directory Listing
Modified Sat Aug 9 12:52:53 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated Xnat xcat importing to use AddArchetypeVolume instead of AddArchetypeScalar volume so dti and dwi files can be distinguished

Revision 7420  Directory Listing
Modified Fri Aug 8 20:39:41 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: clear the storage node ID from the newly read storable nodes so they won't name clash with existing nodes in the scene

Revision 7419  Directory Listing
Modified Fri Aug 8 19:04:09 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: catch any error condition from updating image header info

Revision 7418  Directory Listing
Modified Fri Aug 8 18:44:20 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
COMP: getting rid of warnings

Revision 7417  Directory Listing
Modified Fri Aug 8 18:29:31 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
ENH: new slice label outline icon

Revision 7416  Directory Listing
Modified Fri Aug 8 18:29:21 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
ENH: new slice label outline icon

Revision 7415  Directory Listing
Modified Fri Aug 8 18:08:31 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
ENH: updated icon files for label outlines, label opacity

Revision 7414  Directory Listing
Modified Fri Aug 8 18:07:58 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
ENH: new label outline icons

Revision 7413  Directory Listing
Modified Fri Aug 8 15:46:31 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: move up to ITK 3.8 for new builds

Revision 7412  Directory Listing
Modified Fri Aug 8 15:38:58 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
STYLE: fix help string

Revision 7411  Directory Listing
Modified Fri Aug 8 15:33:26 2008 UTC (9 years, 1 month ago) by karthik
Original Path: trunk
BUG: Nasty bug in the textures messing up somewhere in vtkOpenGLTexture::Load through vtkTextActor. For the time being, we'll circumvent it by using vtkActor2D/vtkTextMapper pair instead of vtkTextActor. We will need to fix vtkTextActor at some point.

Revision 7410  Directory Listing
Modified Thu Aug 7 22:48:17 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
ENH: cleaned up the slice layer logic to remove unused vars and methods, then added in the label outline filter for the label layer. For now, set a flag in slice logic to tell the slice layer that it's the label layer, expand upon this when generalise the number of layers

Revision 7408  Directory Listing
Modified Thu Aug 7 20:22:51 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: avoid crash when testing the header of a non-image data file

Revision 7407  Directory Listing
Modified Thu Aug 7 17:18:21 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
ENH: Added a new function for Archetype Reader so that user can directly add file names (one at a time for vtk wrapping). One user set file names, only these files given by the user will be analyzed.

Revision 7406  Directory Listing
Modified Thu Aug 7 08:07:29 2008 UTC (9 years, 1 month ago) by lantiga
Original Path: trunk
ENH: Committing changes to Python infrastructure

Revision 7405  Directory Listing
Modified Thu Aug 7 02:55:37 2008 UTC (9 years, 1 month ago) by tgl
Original Path: trunk
BUG 290: Append a newline to the text file, instead of a \0  The parse loop wont exit unless the last colon (:) has a newline after it somewhere.

Revision 7404  Directory Listing
Modified Wed Aug 6 19:41:40 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
BUG: gdcmIO does not throw an exception even if it can not read a file.

Revision 7403  Directory Listing
Modified Wed Aug 6 19:17:55 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
BUG: gdcmIO does not throw an exception even if it can not read a file.

Revision 7402  Directory Listing
Modified Tue Aug 5 21:25:01 2008 UTC (9 years, 1 month ago) by alexy
Original Path: trunk
ENH: fixed colormap on 2d grlyphs

Revision 7401  Directory Listing
Modified Tue Aug 5 20:50:20 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
BUG: the output scene doesn't need the colour node

Revision 7400  Directory Listing
Modified Tue Aug 5 17:50:58 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: puts most important dicom header tags first in the table

Revision 7399  Directory Listing
Modified Tue Aug 5 15:53:56 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: dicom parser interface for the loadvolume widget

Revision 7398  Directory Listing
Modified Tue Aug 5 11:09:01 2008 UTC (9 years, 1 month ago) by aylward
Original Path: trunk
ENH: Some speed improvement


Revision 7397  Directory Listing
Modified Mon Aug 4 16:59:58 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: turn off scipy until build issues resolved

Revision 7396  Directory Listing
Modified Sun Aug 3 15:56:55 2008 UTC (9 years, 1 month ago) by alexy
Original Path: trunk
ENH: added tractography fiducial seeding parameter node

Revision 7395  Directory Listing
Modified Sat Aug 2 20:31:48 2008 UTC (9 years, 1 month ago) by alexy
Original Path: trunk
BUG-FIXED: made renaming of nodes in Data widget to reflect in models tree

Revision 7394  Directory Listing
Modified Fri Aug 1 20:20:22 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
BUG-FIX: don't add the label integer and colour name if only making one model

Revision 7393  Directory Listing
Modified Fri Aug 1 19:00:53 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: disable scipy everywhere - not all macs can build it

Revision 7392  Directory Listing
Modified Fri Aug 1 16:27:08 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: disable python on linux for now - it requires several libraries that are hard to support in a cross platform way without more research

Revision 7391  Directory Listing
Modified Fri Aug 1 15:16:41 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: additional python build variables

Revision 7390  Directory Listing
Modified Fri Aug 1 15:15:53 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: additional python build variables

Revision 7389  Directory Listing
Modified Fri Aug 1 15:11:08 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: improved error dialog and parsing

Revision 7388  Directory Listing
Modified Fri Aug 1 14:55:47 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
STYLE: fix line wrapping for readability

Revision 7387  Directory Listing
Modified Fri Aug 1 14:54:57 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: avoid 0 as stopping value

Revision 7386  Directory Listing
Modified Fri Aug 1 14:52:51 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: change API for creating nodes

Revision 7385  Directory Listing
Modified Fri Aug 1 14:52:16 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: fix position of help window

Revision 7384  Directory Listing
Modified Fri Aug 1 14:40:07 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: add extra include path for numpy

Revision 7383  Directory Listing
Modified Fri Aug 1 14:39:20 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: Make sure the model name is unique

Revision 7382  Directory Listing
Modified Fri Aug 1 14:25:37 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: fix typo in environment variable

Revision 7380  Directory Listing
Modified Fri Aug 1 14:05:18 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: add solaris build fixes from Attila and enable numpy and scipy builds

Revision 7379  Directory Listing
Modified Fri Aug 1 14:04:19 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: add visual studio 9 as an build option (assumes standard install location)

Revision 7378  Directory Listing
Modified Fri Aug 1 02:09:38 2008 UTC (9 years, 1 month ago) by bess
Original Path: trunk
ENH: Removed m_AppendMode and used superclass's member functions to access it.

Revision 7377  Directory Listing
Modified Fri Aug 1 01:19:09 2008 UTC (9 years, 1 month ago) by bess
Original Path: trunk
ENH: Added DisplacementFieldTransform.

Revision 7376  Directory Listing
Modified Fri Aug 1 01:16:38 2008 UTC (9 years, 1 month ago) by bess
Original Path: trunk
ENH: Added extended transform reader and writer for transforms that have encoded parameters.

Revision 7375  Directory Listing
Modified Thu Jul 31 21:26:19 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: basic dicom header interface using new methods from Xiaodong

Revision 7374  Directory Listing
Modified Thu Jul 31 14:28:38 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
ENH: SlicerVolumesGUI now parses dicom header once a file is selected. 

Revision 7373  Directory Listing
Modified Thu Jul 31 11:45:45 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
COMP: fixed a singed/unsigned warning.

Revision 7372  Directory Listing
Modified Thu Jul 31 04:36:56 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
ENH: Added new UI component to allow user make decision on whether to ignore image orientation from the file. This is useful for viewing one slice from an oblique series.

Revision 7371  Directory Listing
Modified Thu Jul 31 04:17:23 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
ENH: Changed the logic so not to waste time examining the whole directory for singleFile loading.

Revision 7370  Directory Listing
Modified Thu Jul 31 00:16:29 2008 UTC (9 years, 1 month ago) by aylward
Original Path: trunk
BUG: Resolved flawed logic when limiting samples to the overlapping volume between the fixed and moving images


Revision 7369  Directory Listing
Modified Wed Jul 30 23:34:00 2008 UTC (9 years, 1 month ago) by alexy
Original Path: trunk
ENH: merged demianVolumeGlyph-Simple branch

Revision 7368  Directory Listing
Modified Wed Jul 30 21:36:52 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
ENH: added methods for querying dicom header info.

Revision 7367  Directory Listing
Modified Wed Jul 30 20:27:27 2008 UTC (9 years, 1 month ago) by francois_budin
Original Path: trunk
BUG: Correction of a problem when loading non-rigid transforms

Revision 7365  Directory Listing
Modified Wed Jul 30 16:39:20 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: avoid testing mapped status of un-created widgets

Revision 7364  Directory Listing
Modified Wed Jul 30 14:58:47 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
BUG: fixing MGH (uncompressed) file writing, it wasn't converting back to RAS from LPS.

Revision 7363  Directory Listing
Modified Wed Jul 30 13:35:51 2008 UTC (9 years, 1 month ago) by millerjv
Original Path: trunk
BUG: Calls to exit() need to be replaced with calls to return.

Revision 7362  Directory Listing
Modified Wed Jul 30 13:23:02 2008 UTC (9 years, 1 month ago) by millerjv
Original Path: trunk
BUG: documentation string on factory overrride

Revision 7361  Directory Listing
Modified Wed Jul 30 11:22:28 2008 UTC (9 years, 1 month ago) by aylward
Original Path: trunk
BUG: Need to set channel (in/out) for transform io.  Also check pixel type of fixed and moving images.


Revision 7360  Directory Listing
Modified Wed Jul 30 00:10:43 2008 UTC (9 years, 1 month ago) by pohl
Original Path: trunk
BUG: ITK_AUTOLOAD_PATH was not set correctly 

Revision 7359  Directory Listing
Modified Tue Jul 29 23:23:46 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
BUG: fixing MGZ file writing, it wasn't converting back to RAS from LPS. ToDo: fix MGH writing

Revision 7358  Directory Listing
Modified Tue Jul 29 22:11:55 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: add python to the standard startup sequence (library paths and install tree)

Revision 7355  Directory Listing
Modified Tue Jul 29 16:02:18 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
STYLE: catch and print out an error message if can't find needed packages

Revision 7353  Directory Listing
Modified Tue Jul 29 15:07:01 2008 UTC (9 years, 1 month ago) by alexy
Original Path: trunk
BUG-FIXED: URL encodintg returns pointer that should be copied by caller

Revision 7352  Directory Listing
Modified Tue Jul 29 13:27:55 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
STYLE: fix indentation

Revision 7351  Directory Listing
Modified Tue Jul 29 13:18:43 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: fix code to match changed API

Revision 7350  Directory Listing
Modified Mon Jul 28 22:14:07 2008 UTC (9 years, 1 month ago) by pohl
Original Path: trunk
BUG: Function does not need to be called anymore

Revision 7348  Directory Listing
Modified Mon Jul 28 21:31:20 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: move deletion of undo buffer from destructor to tear down gui method - this way it is called while interpreter is still in scope

Revision 7347  Directory Listing
Modified Mon Jul 28 17:48:12 2008 UTC (9 years, 1 month ago) by aylward
Original Path: trunk
BUG: Requires ITK version 3.7 or greater


Revision 7346  Directory Listing
Modified Mon Jul 28 17:17:18 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: fixes for solaris support from Attila Nagy

Revision 7345  Directory Listing
Modified Mon Jul 28 14:27:21 2008 UTC (9 years, 1 month ago) by aylward
Original Path: trunk
ENH: Enable RegisterImages module


Revision 7344  Directory Listing
Modified Mon Jul 28 03:32:56 2008 UTC (9 years, 1 month ago) by aylward
Original Path: trunk
ENH: Fully working version of pipelined registration.  Still needs to provide progress information


Revision 7343  Directory Listing
Modified Sat Jul 26 14:47:03 2008 UTC (9 years, 1 month ago) by alexy
Original Path: trunk
ENH: update NodeSelectorWidget only when it is exposed

Revision 7342  Directory Listing
Modified Fri Jul 25 21:14:38 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: added singled level undo to editor along with some code cleanup

Revision 7341  Directory Listing
Modified Fri Jul 25 20:36:19 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: fix memory leak due to wrong allocator used in buildOptions method (didn't use 'smart' pointer)

Revision 7340  Directory Listing
Modified Fri Jul 25 19:24:39 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing the loading and import of Xcede catalogs

Revision 7339  Directory Listing
Modified Fri Jul 25 18:19:27 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: detect non-aligned volumes and slices and show dialog box rather than allowing incorrect editing

Revision 7338  Directory Listing
Modified Fri Jul 25 16:28:59 2008 UTC (9 years, 1 month ago) by naucoin
Original Path: trunk
BUG: ran dos2unix on this file, GenerateCLP then building was failing due to the control M's

Revision 7337  Directory Listing
Modified Fri Jul 25 14:40:20 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
ENH: fix scroll test to match new api

Revision 7336  Directory Listing
Modified Thu Jul 24 22:25:45 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
COMP: add support for solaris x86 (many thanks to Attila Nagy\!)

Revision 7335  Directory Listing
Modified Thu Jul 24 21:53:31 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: avoid error when no background is selected also kill current effect when exiting module

Revision 7334  Directory Listing
Modified Thu Jul 24 21:26:24 2008 UTC (9 years, 1 month ago) by francois_budin
Original Path: trunk
BUG: Save output in any format supported by ITK

Revision 7333  Directory Listing
Modified Thu Jul 24 18:42:29 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: return the a directory name rather than 'pkgIndex'

Revision 7332  Directory Listing
Modified Thu Jul 24 16:20:28 2008 UTC (9 years, 1 month ago) by taox
Original Path: trunk
ENH: process stacks of jpg, bmp, png, tiff, and raw images differently. Since they may not have proper slice location, assign a location based on the order or file names.

Revision 7330  Directory Listing
Modified Wed Jul 23 23:36:02 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: set module name when using module logic outside of slicer so the installation path can be correctly calculated

Revision 7329  Directory Listing
Modified Wed Jul 23 23:34:50 2008 UTC (9 years, 1 month ago) by pieper
Original Path: trunk
BUG: fix logic for calculating module installation path

Revision 7328  Directory Listing
Modified Wed Jul 23 21:31:41 2008 UTC (9 years, 1 month ago) by francois_budin
Original Path: trunk
BUG: changed return values

Revision 7327  Directory Listing
Modified Wed Jul 23 18:27:43 2008 UTC (9 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added CompareView layout to MRML Layout representation

Revision 7326  Directory Listing
Modified Tue Jul 22 21:19:51 2008 UTC (9 years, 2 months ago) by alexy
Original Path: trunk
ENH: fixed problems introduced by making Volumes loadable

Revision 7325  Directory Listing
Modified Tue Jul 22 21:01:08 2008 UTC (9 years, 2 months ago) by hayes
Original Path: trunk
ENH: Updated links

Revision 7324  Directory Listing
Modified Tue Jul 22 17:05:52 2008 UTC (9 years, 2 months ago) by pieper
Original Path: trunk
COMP: fix windows header for volumes logic (class is probably in the wrong place - it should be in Base/Logic)

Revision 7323  Directory Listing
Modified Mon Jul 21 21:46:42 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Did not work in release version because one comand was not executed inside  assert( ) 

Revision 7322  Directory Listing
Modified Mon Jul 21 21:45:04 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Added more error messages to simplify debugging in the future

Revision 7321  Directory Listing
Modified Mon Jul 21 21:41:41 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Piepeline would crash if VolumeNode had no image data attached to it - now explicitly checks for it 

Revision 7320  Directory Listing
Modified Mon Jul 21 21:37:51 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Name change from  TumorGrowth to ChangeTracker also had to be done in the tcl files

Revision 7319  Directory Listing
Modified Mon Jul 21 18:23:36 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Location of script changed but path was not updated 

Revision 7318  Directory Listing
Modified Mon Jul 21 15:33:35 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
COMP: Warning about unused variable


Revision 7317  Directory Listing
Modified Mon Jul 21 15:32:18 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
COMP: Warnings about unused variables and signed/unsigned comparisons


Revision 7316  Directory Listing
Modified Mon Jul 21 12:22:41 2008 UTC (9 years, 2 months ago) by tgl
Original Path: trunk
COMP SlicerVolumeLogic has moved, furthermore, its not used by this class

Revision 7314  Directory Listing
Modified Sun Jul 20 18:53:17 2008 UTC (9 years, 2 months ago) by tgl
Original Path: trunk
ENH Adding loadable module support to Volumes Module

Revision 7313  Directory Listing
Modified Sat Jul 19 16:53:23 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: tidying up packing of CompareView with temporary solution until we add CompareView to the vtkMRMLLayoutNode

Revision 7311  Directory Listing
Modified Fri Jul 18 17:56:54 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
BUG: fixing colour names

Revision 7307  Directory Listing
Modified Fri Jul 18 11:58:25 2008 UTC (9 years, 2 months ago) by kerstin
Original Path: trunk
COMP: fixed warnings from CDash

Revision 7306  Directory Listing
Modified Fri Jul 18 10:25:24 2008 UTC (9 years, 2 months ago) by kerstin
Original Path: trunk
ENH: add more explicit documentation

Revision 7305  Directory Listing
Modified Thu Jul 17 18:52:41 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: partially fixed packing problem when layouts are changed. Still working on CompareView

Revision 7304  Directory Listing
Modified Thu Jul 17 14:09:51 2008 UTC (9 years, 2 months ago) by taox
Original Path: trunk
BUG: non-dicom series was not handled correctly. SingleFile was not used. These two problems are now fixed.

Revision 7302  Directory Listing
Modified Wed Jul 16 15:27:19 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: eliminated debug leaks

Revision 7300  Directory Listing
Modified Tue Jul 15 23:49:12 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Modified name of module based on Ron's suggestion

Revision 7299  Directory Listing
Modified Tue Jul 15 21:40:34 2008 UTC (9 years, 2 months ago) by taox
Original Path: trunk
BUG: When the file selected was a slice file (region.size[2] == 1 && candidatefiles.size() == 1), this->FileNames was not set correctly. 

Revision 7298  Directory Listing
Modified Tue Jul 15 20:50:31 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: cleaning up MRML references to remove debug leaks

Revision 7292  Directory Listing
Modified Tue Jul 15 16:07:50 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: what if the launcher doesn't exist (Slicer3-win64.exe?)

Revision 7291  Directory Listing
Modified Mon Jul 14 20:54:05 2008 UTC (9 years, 2 months ago) by taox
Original Path: trunk
BUG: When the file selected was a volume file (region.size[2] >1), this->FileNames was empty. 

Revision 7290  Directory Listing
Modified Mon Jul 14 20:04:29 2008 UTC (9 years, 2 months ago) by pieper
Original Path: trunk
COMP: vtksys not available, use itksys

Revision 7289  Directory Listing
Modified Mon Jul 14 20:02:09 2008 UTC (9 years, 2 months ago) by pieper
Original Path: trunk
BUG: workaround for nvidia gl library issue on linux by unseting ITK_AUTOLOAD_PATH while launching command line modules (restore path after launch so the next shared module invocation will work)

Revision 7288  Directory Listing
Modified Mon Jul 14 17:07:44 2008 UTC (9 years, 2 months ago) by taox
Original Path: trunk
ENH: Enhanced vtkITKArchetypeImageSeriesReader to load dicom images in a meaningful way. The reader now analyzes headers of all dicom files to determine how files may be grouped (for example, images with same series instance UID may represent volumes acquired with different trigger times, different diffusion gradient directions, etc). The reader provides interfaces that allow user to selected desired grouping for meaningful display.

Revision 7287  Directory Listing
Modified Sat Jul 12 11:32:33 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed 'LookFrom' method to respect the lookat point (if not origin) for astromed

Revision 7286  Directory Listing
Modified Sat Jul 12 11:21:26 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixing crash on exit by releasing references to SlicesGUI and ApplicationGUI in correct order

Revision 7284  Directory Listing
Modified Fri Jul 11 20:06:58 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
BUG: workaround to trigger recalculation of the scalar volume auto win/level when command line modules return, esp for DTI volumes processed to scalar volumes

Revision 7283  Directory Listing
Modified Fri Jul 11 02:39:00 2008 UTC (9 years, 2 months ago) by tgl
Original Path: trunk
ENH tractography is now loadable

Revision 7282  Directory Listing
Modified Thu Jul 10 22:25:16 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
STYLE: use the quick formatting tags. Added line breaks, they show up on the cmd line via --help, but they're still not visible in the Help tab in Slicer3

Revision 7278  Directory Listing
Modified Thu Jul 10 03:05:19 2008 UTC (9 years, 2 months ago) by alexy
Original Path: trunk
ENH: added tractography fiducial seeding region

Revision 7277  Directory Listing
Modified Wed Jul 9 16:14:46 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
BUG: clean up leaks

Revision 7276  Directory Listing
Modified Wed Jul 9 15:31:19 2008 UTC (9 years, 2 months ago) by lorensen
Original Path: trunk
COMP: gcc4.3 include <cstring> for strcpy.

Revision 7275  Directory Listing
Modified Wed Jul 9 12:04:51 2008 UTC (9 years, 2 months ago) by millerjv
Original Path: trunk
BUG: clearing the map of slice logics.

Revision 7274  Directory Listing
Modified Tue Jul 8 21:26:19 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: Unused var


Revision 7273  Directory Listing
Modified Tue Jul 8 21:25:45 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: Uninitialized var - due to poorly designed switch statement


Revision 7272  Directory Listing
Modified Tue Jul 8 18:02:54 2008 UTC (9 years, 2 months ago) by pieper
Original Path: trunk
BUG: fix a few typos in the multi-seeding case

Revision 7271  Directory Listing
Modified Tue Jul 8 17:54:31 2008 UTC (9 years, 2 months ago) by alexy
Original Path: trunk
ENH: added seeding resgion to tractography

Revision 7270  Directory Listing
Modified Tue Jul 8 17:18:12 2008 UTC (9 years, 2 months ago) by pieper
Original Path: trunk
ENH: prototype of grid of seed points around current fiducial

Revision 7269  Directory Listing
Modified Tue Jul 8 17:07:50 2008 UTC (9 years, 2 months ago) by lorensen
Original Path: trunk
COMP: gcc 4.3 does not allow a type to have the same name as a templated class.

Revision 7267  Directory Listing
Modified Tue Jul 8 14:41:10 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: no default value - due to poor switch/case construction


Revision 7266  Directory Listing
Modified Tue Jul 8 14:39:15 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: Signed/unsigned


Revision 7265  Directory Listing
Modified Tue Jul 8 14:34:08 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: Unused vars


Revision 7264  Directory Listing
Modified Tue Jul 8 14:09:40 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: Signed/unsigned


Revision 7263  Directory Listing
Modified Tue Jul 8 14:08:15 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: Signed/unsigned comparisons


Revision 7262  Directory Listing
Modified Tue Jul 8 14:05:34 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: Uninitialized var


Revision 7261  Directory Listing
Modified Tue Jul 8 14:03:14 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: Uninitialized vars


Revision 7260  Directory Listing
Modified Tue Jul 8 14:02:04 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: Used without initialization


Revision 7259  Directory Listing
Modified Tue Jul 8 13:58:29 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: Unused var


Revision 7258  Directory Listing
Modified Tue Jul 8 13:57:09 2008 UTC (9 years, 2 months ago) by aylward
Original Path: trunk
BUG: Unused variable


Revision 7257  Directory Listing
Modified Mon Jul 7 23:47:50 2008 UTC (9 years, 2 months ago) by lorensen
Original Path: trunk
COMP: gcc 4.3 missing includes.

Revision 7256  Directory Listing
Modified Mon Jul 7 23:11:14 2008 UTC (9 years, 2 months ago) by lorensen
Original Path: trunk
COMP: gcc 4.3 missing includes.

Revision 7255  Directory Listing
Modified Mon Jul 7 22:59:17 2008 UTC (9 years, 2 months ago) by lorensen
Original Path: trunk
COMP: gcc 4.3 missing include.

Revision 7254  Directory Listing
Modified Mon Jul 7 21:43:14 2008 UTC (9 years, 2 months ago) by hjohnson
Original Path: trunk
BUG:  accidently commited a file that had debugging code in it.  Reverted to previous version.

Revision 7253  Directory Listing
Modified Mon Jul 7 21:40:39 2008 UTC (9 years, 2 months ago) by hjohnson
Original Path: trunk
COMP:  Removed compiler warnings from generated CLP files.

Revision 7251  Directory Listing
Modified Mon Jul 7 17:56:02 2008 UTC (9 years, 2 months ago) by lorensen
Original Path: trunk
COMP: gcc 4.3 includes.

Revision 7250  Directory Listing
Modified Mon Jul 7 15:25:12 2008 UTC (9 years, 2 months ago) by rjosest
Original Path: trunk
BUG: Bail out when data pointer is NULL

Revision 7249  Directory Listing
Modified Mon Jul 7 15:08:03 2008 UTC (9 years, 2 months ago) by millerjv
Original Path: trunk
ENH: error handling

Revision 7248  Directory Listing
Modified Mon Jul 7 15:07:40 2008 UTC (9 years, 2 months ago) by millerjv
Original Path: trunk
ENH: Added "alias" and "deprecatedalias" attributes to <flag> and <longflag> tags in the ModuleDescription. Aliases and deprecated aliases are automatically mapped to the proper flag. Deprecated aliases will emit a warning when used.

Revision 7247  Directory Listing
Modified Sun Jul 6 19:45:36 2008 UTC (9 years, 2 months ago) by kerstin
Original Path: trunk
STYLE: give more explicit method names

Revision 7245  Directory Listing
Modified Thu Jul 3 18:23:13 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
ENH: instead of toggling between 0 and 1 for the label opacity, toggle between 0 and the last chosen opacity

Revision 7244  Directory Listing
Modified Wed Jul 2 19:01:28 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: restored fiducialGUI's color and select color conventions

Revision 7243  Directory Listing
Modified Wed Jul 2 18:57:00 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: cleaning up testing comments

Revision 7242  Directory Listing
Modified Wed Jul 2 18:55:09 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: layout changes to fiducials module

Revision 7241  Directory Listing
Modified Wed Jul 2 18:53:23 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding icons for the fiducials module

Revision 7240  Directory Listing
Modified Wed Jul 2 16:32:36 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: fix missing FUNC

Revision 7239  Directory Listing
Modified Wed Jul 2 14:53:16 2008 UTC (9 years, 2 months ago) by bess
Original Path: trunk
COMP: Fixed the warning.

Revision 7238  Directory Listing
Modified Wed Jul 2 02:31:13 2008 UTC (9 years, 2 months ago) by bess
Original Path: trunk
ENH: Completed the grid transform for loading/saving scenes and for communicating with modules.

Revision 7237  Directory Listing
Modified Tue Jul 1 21:27:32 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
BUG: also watch for node removed events from the list so can update the list box

Revision 7236  Directory Listing
Modified Tue Jul 1 21:14:47 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: now come one now, you can't do that, CMake will look for a CMakeLists.txt in Testing/ :)

Revision 7235  Directory Listing
Modified Tue Jul 1 20:52:25 2008 UTC (9 years, 2 months ago) by pieper
Original Path: trunk
BUG: workaround for improperly loaded tcl wrapping

Revision 7234  Directory Listing
Modified Tue Jul 1 20:32:52 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
COMP: take out direct dependency on the vtkSlicerSlicesControlGUI header

Revision 7233  Directory Listing
Modified Tue Jul 1 20:31:04 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
ENH: added a toggle button for the label opacity, switches between 0 and 1

Revision 7232  Directory Listing
Modified Tue Jul 1 19:44:57 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
ENH: Modified User interface according to Ron

Revision 7230  Directory Listing
Modified Tue Jul 1 19:28:28 2008 UTC (9 years, 2 months ago) by alexy
Original Path: trunk
BUG: fixed scene snpashot referencing external nodes and vise versa

Revision 7224  Directory Listing
Modified Fri Jun 27 19:29:28 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
BUG: don't call Render directly, use RequestRender to avoid re-entering the vtk Render method (caused a crash when adding FS annotations to a model)

Revision 7223  Directory Listing
Modified Fri Jun 27 16:16:32 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: fix submission to dashboard for plugins

Revision 7221  Directory Listing
Modified Fri Jun 27 15:43:10 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
BUG: slicer3 trunk needs to build against kwwidgets head

Revision 7218  Directory Listing
Modified Fri Jun 27 14:37:44 2008 UTC (9 years, 2 months ago) by lorensen
Original Path: trunk
COMP: warnings unused variables.

Revision 7217  Directory Listing
Modified Fri Jun 27 14:36:14 2008 UTC (9 years, 2 months ago) by lorensen
Original Path: trunk
BUG: missing include for vtksys/stl/string.

Revision 7216  Directory Listing
Modified Fri Jun 27 14:12:46 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
ENH: stop using the modified event, use the scene node added event on the list when add a new point

Revision 7215  Directory Listing
Modified Fri Jun 27 14:12:42 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: move the splashscreen so that it can be used by other launchers

Revision 7214  Directory Listing
Modified Fri Jun 27 13:24:57 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: move the splashscreen so that it can be used by other launchers

Revision 7213  Directory Listing
Modified Fri Jun 27 12:37:28 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: add a button to reslice tree (MRML, Model)

Revision 7207  Directory Listing
Modified Thu Jun 26 18:45:58 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: trying to fix packing in the view control GUI

Revision 7206  Directory Listing
Modified Thu Jun 26 18:34:20 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
BUG: tried putting in event broker obervations instead of adding observers to the fiducial list directly, but it slowed down interactivity to below useless levels. Will work on speed ups and then reinstate the broker code

Revision 7205  Directory Listing
Modified Thu Jun 26 18:29:30 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: turning off backface culling as workaround; this was causing vtkTextActors to not be displayed

Revision 7204  Directory Listing
Modified Thu Jun 26 18:11:51 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: minor cleanup before the font cleanup

Revision 7202  Directory Listing
Modified Thu Jun 26 16:46:55 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: do not hardcode font size, use the theme

Revision 7201  Directory Listing
Modified Thu Jun 26 16:41:20 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
COMP: remove useless #include

Revision 7200  Directory Listing
Modified Thu Jun 26 15:47:46 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
ENH: refactor a little bit to encapsulate the adding and remove of observers on the fiducial lists, and all list versus single list operations

Revision 7197  Directory Listing
Modified Thu Jun 26 14:57:04 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: fix crash on exit. still not quite sure why this was un-noticed.

Revision 7196  Directory Listing
Modified Thu Jun 26 14:26:56 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
ENH: minor clean up, cast the parameters at the top

Revision 7195  Directory Listing
Modified Thu Jun 26 14:07:35 2008 UTC (9 years, 2 months ago) by millerjv
Original Path: trunk
ENH: renaming LinearRegistration to RigidRegistration

Revision 7194  Directory Listing
Modified Thu Jun 26 13:59:01 2008 UTC (9 years, 2 months ago) by millerjv
Original Path: trunk
ENH: made AffineRegistration a shared library module

Revision 7193  Directory Listing
Modified Thu Jun 26 13:26:59 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
ENH: move to second generation box widget, using the widget2 and representation that were ported from vtk5.2

Revision 7192  Directory Listing
Modified Thu Jun 26 12:37:44 2008 UTC (9 years, 2 months ago) by millerjv
Original Path: trunk
BUG: potential fix for the compare view popup disappearing. Code is now similar to the Lightbox popup.

Revision 7191  Directory Listing
Modified Thu Jun 26 12:36:25 2008 UTC (9 years, 2 months ago) by millerjv
Original Path: trunk
ENH: Added a "Add Transform..." to File menu.

Revision 7190  Directory Listing
Modified Wed Jun 25 23:24:26 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Checked in by mistake

Revision 7189  Directory Listing
Modified Wed Jun 25 22:20:13 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: remove duplicated code (hint: if you see a red button in the lower right at run-time, then your code did something wrong).

Revision 7188  Directory Listing
Modified Wed Jun 25 22:06:31 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
ENH: move to the second generation implicit plane widget, add the representation. Added a check for the dot product of the slice and widget normals being out of range

Revision 7187  Directory Listing
Modified Wed Jun 25 21:24:31 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
ENH: moving to the second generation vtk widgets. Copied vtkBoxWidget2 here and renamed it, and copied vtkBoxRepresentation here and also renamed it bus also reinstated hopefully all the changes that Andy made in his box widget

Revision 7186  Directory Listing
Modified Wed Jun 25 19:45:24 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed QueryAtlas installation to not copy Resource header file

Revision 7183  Directory Listing
Modified Wed Jun 25 18:55:16 2008 UTC (9 years, 2 months ago) by hayes
Original Path: trunk
ENH: Changed to new svn repository

Revision 7182  Directory Listing
Modified Wed Jun 25 18:35:04 2008 UTC (9 years, 2 months ago) by taox
Original Path: trunk
BUG: mesh cells container pointer type conversion problem....


Revision 7181  Directory Listing
Modified Wed Jun 25 17:49:35 2008 UTC (9 years, 2 months ago) by millerjv
Original Path: trunk
ENH: Compare view merge from branch (revision 7116) plus a bit of refactoring.

Revision 7180  Directory Listing
Modified Wed Jun 25 17:48:09 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
COMP: minor. One of the reason Slicer3 is so slow to compile is that so many classes include STL headers in their own header, instead of their implementation file (PIMPL). Some of those headers are actually not needed anymore by said classes, or were put there "just in case I need a map, vector, list, etc.". The more it happens, the slower the build process gets, and the slower the dependencies are computed/resolved. Try to fix some.

Revision 7179  Directory Listing
Modified Wed Jun 25 17:44:58 2008 UTC (9 years, 2 months ago) by taox
Original Path: trunk
ENH: vtkMRMLModelStorageNode now loads models in meta format.

Revision 7178  Directory Listing
Modified Wed Jun 25 17:44:09 2008 UTC (9 years, 2 months ago) by millerjv
Original Path: trunk
COMP: vtksys include files needed.

Revision 7177  Directory Listing
Modified Wed Jun 25 16:35:33 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: oops

Revision 7176  Directory Listing
Modified Wed Jun 25 15:58:36 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
COMP: minor. One of the reason Slicer3 is so slow to compile is that so many classes include STL headers in their own header, instead of their implementation file (PIMPL). Some of those headers are actually not needed anymore by said classes, or were put there "just in case I need a map, vector, list, etc.". The more it happens, the slower the build process gets, and the slower the dependencies are computed/resolved. Try to fix some.

Revision 7175  Directory Listing
Modified Wed Jun 25 15:51:24 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
COMP: fix casting, could not build on .Net2005

Revision 7173  Directory Listing
Modified Wed Jun 25 14:22:28 2008 UTC (9 years, 2 months ago) by hayes
Original Path: trunk
ENH: Changecd tag to new SVN server

Revision 7172  Directory Listing
Modified Wed Jun 25 13:44:46 2008 UTC (9 years, 2 months ago) by naucoin
Original Path: trunk
STYLE: fixed typo in Tractography Fiducial Seeding string

Revision 7171  Directory Listing
Modified Wed Jun 25 13:17:35 2008 UTC (9 years, 2 months ago) by hjohnson
Original Path: trunk
COMP:  Removed compiler warnings due to mis-matched types.

Revision 7168  Directory Listing
Modified Wed Jun 25 12:44:58 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed installation of Resource files for QueryAtlas

Revision 7167  Directory Listing
Modified Wed Jun 25 10:04:06 2008 UTC (9 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: moved layout node outside MRML_USE_vtkTeem scope

Revision 7166  Directory Listing
Modified Wed Jun 25 06:06:45 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Cleaned up the code and put in some comments

Revision 7165  Directory Listing
Modified Wed Jun 25 05:35:53 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
ENH: Module should work now on all platforms

Revision 7164  Directory Listing
Modified Wed Jun 25 05:31:49 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Module does not crash anymore after closing down

Revision 7163  Directory Listing
Modified Wed Jun 25 05:31:26 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Module does not crash anymore after closing down

Revision 7162  Directory Listing
Modified Wed Jun 25 05:31:05 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Module does not crash anymore after closing down

Revision 7161  Directory Listing
Modified Wed Jun 25 05:30:39 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Module does not crash anymore after closing down

Revision 7160  Directory Listing
Modified Wed Jun 25 05:29:20 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Module does not crash anymore after closing down

Revision 7159  Directory Listing
Modified Wed Jun 25 04:51:52 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: I do not know why it was checked in 

Revision 7158  Directory Listing
Modified Wed Jun 25 00:55:27 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: rename tcl -> foo -> Tcl

Revision 7157  Directory Listing
Modified Wed Jun 25 00:54:40 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: rename tcl -> foo -> Tcl

Revision 7156  Directory Listing
Modified Wed Jun 25 00:51:37 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
COMP: fix the configure rules for the Tcl, Simulation and Testing files, they were not configured/copied to the right place (i.e. in the modules' share dir), and they were not installed at all. Also fixed the logic file to look at the right place, whether the module was built in Slicer3, built outside, or installed.

Revision 7155  Directory Listing
Modified Wed Jun 25 00:43:47 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: fix, files were added but not installed/configured

Revision 7154  Directory Listing
Modified Wed Jun 25 00:42:50 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
BUG: fix access NULL pointer on exit. Not sure how this was missed, it can only crash.

Revision 7153  Directory Listing
Modified Tue Jun 24 22:14:09 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH: output the CLP plugins to the right location

Revision 7151  Directory Listing
Modified Tue Jun 24 19:40:39 2008 UTC (9 years, 2 months ago) by barre
Original Path: trunk
ENH:  fix width (Win32 does not support resizing a scrollbar properly, it merely crops the arrow icon/buttons at each end of the scrollbar, which is unsightly. 15 seems to be the smallest possible value, do not change it, or put it inside a #ifdef _WIN32 if you want to have slimmer scrollbar on Unix, at the cost of a slightly different look&feel with Win32.

Revision 7150  Directory Listing
Modified Tue Jun 24 17:16:25 2008 UTC (9 years, 2 months ago) by zack.galbreath
Original Path: trunk
ENH: switch seems to have worked, removing temporary file

Revision 7149  Directory Listing
Modified Tue Jun 24 17:14:56 2008 UTC (9 years, 2 months ago) by zack.galbreath
Original Path: trunk
ENH: testing commits at new repository

Revision 7147  Directory Listing
Modified Mon Jun 23 20:28:30 2008 UTC (9 years, 2 months ago) by tgl
Original Path: trunk
STYLE: moving the module-specific picking code to Init(), its slightly better here then as part of an overloaded SetApplicationGUI() method.  Done in consultation with N. Aucoin duing 2008 Summer Project Week

Revision 7146  Directory Listing
Modified Mon Jun 23 19:42:47 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Get rid of leaks

Revision 7145  Directory Listing
Modified Mon Jun 23 18:18:37 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Variables were not initialized correctly

Revision 7144  Directory Listing
Modified Mon Jun 23 17:34:17 2008 UTC (9 years, 2 months ago) by pieper
Original Path: trunk
BUG: avoid crash when removing slice node if scene has already been deleted

Revision 7143  Directory Listing
Modified Mon Jun 23 16:07:08 2008 UTC (9 years, 2 months ago) by pohl
Original Path: trunk
BUG: Pointed on instance that did not exists anymore

Revision 7142  Directory Listing
Modified Mon Jun 23 15:22:19 2008 UTC (9 years, 2 months ago) by davisb
Original Path: trunk
BUG: change registration type traits to handle unsigned voxel types (gets around the root problem: ITK pyramid filter does not handle unsigned types)

Revision 7138  Directory Listing
Modified Sun Jun 22 16:15:21 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
BUG: fixed compile error using round

Revision 7137  Directory Listing
Modified Sun Jun 22 06:39:08 2008 UTC (9 years, 3 months ago) by bess
Original Path: trunk
ENH: added the bulk transform to the BSpline transform. Wrote out BSpline to a module.

Revision 7136  Directory Listing
Modified Sun Jun 22 06:23:58 2008 UTC (9 years, 3 months ago) by bess
Original Path: trunk
ENH: added the bulk transform to the BSpline transform.

Revision 7133  Directory Listing
Modified Fri Jun 20 23:55:40 2008 UTC (9 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed bug in QueryAtlas annotation of Qdec datasets

Revision 7131  Directory Listing
Modified Fri Jun 20 23:12:49 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Added new Test Script for Demons Registration

Revision 7130  Directory Listing
Modified Fri Jun 20 23:11:16 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
BUG: Removed bug concerning Demons Registration with Nicole

Revision 7129  Directory Listing
Modified Fri Jun 20 22:35:18 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: clear out the iterations array before adding to the end

Revision 7128  Directory Listing
Modified Fri Jun 20 22:24:23 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: print out arguments

Revision 7127  Directory Listing
Modified Fri Jun 20 22:11:45 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: long flag name fix

Revision 7126  Directory Listing
Modified Fri Jun 20 22:02:11 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: updating defaults in xml from cxx

Revision 7125  Directory Listing
Modified Fri Jun 20 20:51:50 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: or changed to || and not to exclamation point

Revision 7124  Directory Listing
Modified Fri Jun 20 20:37:12 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: fixing short flag

Revision 7123  Directory Listing
Modified Fri Jun 20 20:33:34 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: use the CLI PARSE_ARGS macro instead of get_opt, for cross platform compatibility

Revision 7120  Directory Listing
Modified Fri Jun 20 18:57:15 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: in the change to QdecModule becoming a LoadableModule, the viewer widget and interactor style were not getting set. Subclass the SetApplicationGUI method to set these pointers so that plot events can be observed

Revision 7116  Directory Listing
Modified Thu Jun 19 18:50:34 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
ENH: adding a test to make sure that the required libraries are present: itcl, iwidgets, blt

Revision 7115  Directory Listing
Modified Thu Jun 19 18:31:03 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: BLT still needs to be patched on Darwin

Revision 7114  Directory Listing
Modified Thu Jun 19 18:12:29 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: add in test for sucessful compilation of iwidgets and blt

Revision 7113  Directory Listing
Modified Thu Jun 19 18:09:51 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: reinstating iwidgets and blt, used by the QDEC module

Revision 7100  Directory Listing
Modified Wed Jun 18 18:51:57 2008 UTC (9 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed debug leaks in SceneSnapshot in ViewControlGUI

Revision 7098  Directory Listing
Modified Tue Jun 17 21:04:16 2008 UTC (9 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding LayoutNode

Revision 7097  Directory Listing
Modified Tue Jun 17 21:03:28 2008 UTC (9 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding LayoutNode and distinguishing Layout and GUI Geometry

Revision 7096  Directory Listing
Modified Tue Jun 17 20:58:32 2008 UTC (9 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed confirmation message

Revision 7095  Directory Listing
Modified Tue Jun 17 20:45:50 2008 UTC (9 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new collaborator logos for BrainInfo and adding excel table of ontology terms

Revision 7094  Directory Listing
Modified Tue Jun 17 17:33:39 2008 UTC (9 years, 3 months ago) by aylward
Original Path: trunk
ENH: Tests from version in KWPublic


Revision 7093  Directory Listing
Modified Tue Jun 17 17:32:06 2008 UTC (9 years, 3 months ago) by aylward
Original Path: trunk
ENH: Synchronized with version in KWPublic


Revision 7092  Directory Listing
Modified Tue Jun 17 16:39:18 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
BUG: don't remove items from a container while iterating

Revision 7087  Directory Listing
Modified Tue Jun 17 13:29:29 2008 UTC (9 years, 3 months ago) by demian
Original Path: trunk
ENH: NUMPY support for the slicer python wrapper: *) Uses arrayobject iterface and not libarray *) Supports any number of scalar components in the imagedata *) Support for numeric vtkDataArrays

Revision 7086  Directory Listing
Modified Tue Jun 17 00:05:29 2008 UTC (9 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixing bugs in Look from and Rotate Around when view center is not coincident with originin view control GUI

Revision 7085  Directory Listing
Modified Mon Jun 16 21:56:30 2008 UTC (9 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new image data for view control GUI

Revision 7084  Directory Listing
Modified Mon Jun 16 12:07:30 2008 UTC (9 years, 3 months ago) by davisb
Original Path: trunk
ENH: add command line flag to control stream redirection for command line modules

Revision 7083  Directory Listing
Modified Fri Jun 13 14:40:28 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
ENH: fixed the problem of duplicating image/polydata when loading scene snapshots

Revision 7082  Directory Listing
Modified Fri Jun 13 14:38:43 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
BUG: Reverted to rev 6948 to fix crash on exit

Revision 7079  Directory Listing
Modified Thu Jun 12 21:36:37 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Added Tutorial to module

Revision 7073  Directory Listing
Modified Thu Jun 12 09:38:56 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
BUG: Corrected spelling 

Revision 7072  Directory Listing
Modified Wed Jun 11 22:36:55 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: fix how the fiducial list widget deals with scene closing and fiducial removed events. Added capability to access fiducials by id instead of index to the list.

Revision 7071  Directory Listing
Modified Wed Jun 11 20:49:27 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
ENH: performance optimization for Setting the same nodes

Revision 7070  Directory Listing
Modified Wed Jun 11 20:49:08 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
BUG: Took out tabs when writing results to file so that we can easier archieve the files

Revision 7069  Directory Listing
Modified Wed Jun 11 20:44:49 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Included Progress Bar in Tumor Growth Module

Revision 7068  Directory Listing
Modified Wed Jun 11 20:44:35 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Included Progress Bar in Tumor Growth Module

Revision 7067  Directory Listing
Modified Wed Jun 11 20:43:49 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Included noise removal in analysis

Revision 7066  Directory Listing
Modified Wed Jun 11 20:41:53 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Included Progress Bar in Tumor Growth Module

Revision 7065  Directory Listing
Modified Wed Jun 11 19:18:58 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Data is saved now in different format

Revision 7064  Directory Listing
Modified Wed Jun 11 19:17:41 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Data is saved now in different format

Revision 7063  Directory Listing
Modified Wed Jun 11 19:11:43 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Minor changes in Pipeline

Revision 7062  Directory Listing
Modified Wed Jun 11 18:56:51 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Minor changes in Pipeline

Revision 7061  Directory Listing
Modified Wed Jun 11 15:24:21 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: set the offset on a value changing event

Revision 7059  Directory Listing
Modified Wed Jun 11 14:04:11 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: remove module until non-windows compatible code is removed

Revision 7058  Directory Listing
Modified Wed Jun 11 13:27:57 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: fix pixel type for vector images to be a scalar rather than vector.  that is, the image tries to read a vector of scalars rather than a vector of vectors

Revision 7057  Directory Listing
Modified Wed Jun 11 13:27:03 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
STYLE: avoid runtime warnings by not returning output of pipeline when input is null

Revision 7056  Directory Listing
Modified Tue Jun 10 21:45:51 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
ENH: fixed Modify being called when copy volume node

Revision 7055  Directory Listing
Modified Tue Jun 10 21:27:41 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
BUG: Output of registration is not written to a file anymore 

Revision 7054  Directory Listing
Modified Tue Jun 10 21:15:56 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: remove the extra storage node from the scene

Revision 7051  Directory Listing
Modified Tue Jun 10 21:02:28 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
BUG: Changed SLICER_HOME to Slicer3_HOME !

Revision 7050  Directory Listing
Modified Tue Jun 10 21:00:24 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
BUG: DeleteSliceModel did not remove the nodes from the MRML tree so that nodes were not completely removed - this change was originally proposed by Steve P. from B.

Revision 7049  Directory Listing
Modified Tue Jun 10 18:52:41 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
BUG: changed GuiName to GUIName bc otherwise would cause error when loading module in Slicer 

Revision 7048  Directory Listing
Modified Tue Jun 10 18:37:00 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Modified file so that it complies with new standard

Revision 7047  Directory Listing
Modified Tue Jun 10 18:34:50 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Modified file so that it complies with new standard

Revision 7046  Directory Listing
Modified Tue Jun 10 18:26:19 2008 UTC (9 years, 3 months ago) by millerjv
Original Path: trunk
COMP: configuration issues

Revision 7045  Directory Listing
Modified Tue Jun 10 17:26:43 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
ENH: make volume rendering save restore parameters, snapshots, scene

Revision 7044  Directory Listing
Modified Tue Jun 10 17:25:59 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
ENH: make volume rendering save restore parameters, snapshots, scene

Revision 7042  Directory Listing
Modified Tue Jun 10 17:24:03 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
ENH: fixed modify since read is set on volume copy

Revision 7041  Directory Listing
Modified Tue Jun 10 17:21:41 2008 UTC (9 years, 3 months ago) by millerjv
Original Path: trunk
COMP: configuration issues

Revision 7039  Directory Listing
Modified Tue Jun 10 17:07:03 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: disable TumorGrowth until cmake issues sorted out

Revision 7038  Directory Listing
Modified Tue Jun 10 15:31:58 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: workaround slice increment bug to do with way the tkScale deals with ranges and resolution parameters.  See bug 76 in mantis

Revision 7037  Directory Listing
Modified Tue Jun 10 15:12:22 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Add Diffeomorphic registration - the code originates from Tom Vercauteren , INRIA

Revision 7036  Directory Listing
Modified Tue Jun 10 15:12:03 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Add Diffeomorphic registration - the code originates from Tom Vercauteren , INRIA

Revision 7035  Directory Listing
Modified Tue Jun 10 14:39:04 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Added Tumor Growth Module

Revision 7034  Directory Listing
Modified Tue Jun 10 14:38:08 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Tumor Growth Module

Revision 7033  Directory Listing
Modified Tue Jun 10 14:32:16 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Tumor Growth Module

Revision 7032  Directory Listing
Modified Tue Jun 10 14:20:08 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Tumor Growth Module

Revision 7031  Directory Listing
Modified Tue Jun 10 14:19:23 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: Tumor Growth Module

Revision 7030  Directory Listing
Modified Tue Jun 10 14:17:07 2008 UTC (9 years, 3 months ago) by bess
Original Path: trunk
BUG: remove debugging statements that shouldn't have been there in the first place

Revision 7029  Directory Listing
Modified Tue Jun 10 01:17:00 2008 UTC (9 years, 3 months ago) by pohl
Original Path: trunk
ENH: When PropagateVolumeSelection TumorGrowth does not want to execute FiSliceToAll bc otherwise the 3D Viewer is not set correctly

Revision 7020  Directory Listing
Modified Mon Jun 9 13:53:17 2008 UTC (9 years, 3 months ago) by aylward
Original Path: trunk
ENH: Unused


Revision 7019  Directory Listing
Modified Mon Jun 9 13:28:45 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: add ITK dependencies to CLPLibs used for testing

Revision 7018  Directory Listing
Modified Mon Jun 9 13:08:39 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: add library directives to create grid registration test libs

Revision 7017  Directory Listing
Modified Mon Jun 9 13:05:55 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: add library directives to create bspline and linear registration libraries needed by tests (oddly, this only caused a cmake error on windows, but not on unix)

Revision 7016  Directory Listing
Modified Mon Jun 9 12:56:21 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
ENH: add features to slice paint needed to support visible scope operations (should have been checked in last Friday)

Revision 7015  Directory Listing
Modified Mon Jun 9 12:56:01 2008 UTC (9 years, 3 months ago) by ibanez
Original Path: trunk
ENH: Adding command line arguments to the TestGridTransform test, and renumbering it from 00.

Revision 7014  Directory Listing
Modified Mon Jun 9 12:48:12 2008 UTC (9 years, 3 months ago) by ibanez
Original Path: trunk
ENH: Adding test for the new CLI module TestGridTransformRegistration.

Revision 7013  Directory Listing
Modified Mon Jun 9 12:04:29 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: fix increment type to work on 64 bit

Revision 7012  Directory Listing
Modified Mon Jun 9 03:51:01 2008 UTC (9 years, 3 months ago) by bess
Original Path: trunk
ENH: Implement grid transforms to be communicated from modules into Slicer using itkVectorImage and nrrd images.

Revision 7011  Directory Listing
Modified Sat Jun 7 01:15:30 2008 UTC (9 years, 3 months ago) by ibanez
Original Path: trunk
ENH: Adding standard QuaternionRigidTransform to be used as input in image registration tests.

Revision 7010  Directory Listing
Modified Fri Jun 6 23:34:06 2008 UTC (9 years, 3 months ago) by ibanez
Original Path: trunk
ENH: Adding tests for the LinearRegistration that use different initial transforms
     as perturbations of a perfect registration. This provides a known answer against
     which the outcome of the registration process can be tested.

Revision 7009  Directory Listing
Modified Fri Jun 6 23:31:28 2008 UTC (9 years, 3 months ago) by ibanez
Original Path: trunk
ENH: Basic transforms used to perturbe the initialization of a registered image, 
     to register the images back and compare against a baseline.

Revision 7008  Directory Listing
Modified Fri Jun 6 22:43:41 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
ENH: add framework for all/visible scoping for editor operations

Revision 7006  Directory Listing
Modified Fri Jun 6 19:00:08 2008 UTC (9 years, 3 months ago) by ibanez
Original Path: trunk
ENH: Improving the parameters of the Linear registration tests.
     Adding another test with a different value of histogram bins.

Revision 7005  Directory Listing
Modified Fri Jun 6 18:51:55 2008 UTC (9 years, 3 months ago) by ibanez
Original Path: trunk
ENH: Adding initial test for LinearRegistration module.

Revision 7004  Directory Listing
Modified Fri Jun 6 16:31:49 2008 UTC (9 years, 3 months ago) by ibanez
Original Path: trunk
ENH: Adding initial level of testing for BSplineDeformableRegistration  CLI module.

Revision 7002  Directory Listing
Modified Fri Jun 6 15:04:39 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
BUG-FIXED: reading volume does not case NodeRemove events, made volume display widgets to update properly on load volume

Revision 7001  Directory Listing
Modified Fri Jun 6 14:23:18 2008 UTC (9 years, 3 months ago) by millerjv
Original Path: trunk
BUG: documentation on parameters and their effects.

Revision 6997  Directory Listing
Modified Thu Jun 5 22:12:56 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: if the user resets the save directory, assume we need to unset the URI so it won't get used by default for writing in the storage node.

Revision 6995  Directory Listing
Modified Thu Jun 5 19:42:27 2008 UTC (9 years, 3 months ago) by millerjv
Original Path: trunk
BUG: Modified <title> field to use a prefix of "_" so that it will sort later in the lists. Was using "[]" but that is not allowed in the title of a module due to how module title's are used in Tcl.

Revision 6994  Directory Listing
Modified Thu Jun 5 19:27:26 2008 UTC (9 years, 3 months ago) by millerjv
Original Path: trunk
ENH: Modified <title> field to use [] so that it will sort later in the lists.

Revision 6991  Directory Listing
Modified Thu Jun 5 17:17:04 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
BUG-FIXED: fixed incorrect node deleting in vtkVolumeRenderingGUI.cxx

Revision 6988  Directory Listing
Modified Wed Jun 4 22:31:20 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
ENH: VolumeRendering  parameters save restore in the scene

Revision 6987  Directory Listing
Modified Wed Jun 4 22:30:00 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
ENH: example command line module written in sh that calls two other command ine modules

Revision 6986  Directory Listing
Modified Wed Jun 4 21:37:00 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
ENH: VolumeRendering clipping parameters persistance

Revision 6978  Directory Listing
Modified Wed Jun 4 19:30:12 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: only allow one fiducial per second in to avoid long event response when key repeats quickly

Revision 6973  Directory Listing
Modified Wed Jun 4 13:54:20 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: handle scene snapshot names with spaces in them

Revision 6971  Directory Listing
Modified Tue Jun 3 23:10:32 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: add help windows to island effects

Revision 6970  Directory Listing
Modified Tue Jun 3 23:10:02 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: remove debug output

Revision 6969  Directory Listing
Modified Tue Jun 3 23:09:32 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: add balloon help to color picker

Revision 6968  Directory Listing
Modified Tue Jun 3 22:33:40 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: error dialog for missing volume selection and new default name for label map.  Also center dialogs on main window

Revision 6966  Directory Listing
Modified Tue Jun 3 22:25:53 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: update the orientation label so that any non-aligned slice orientation is specified to be Reformat

Revision 6965  Directory Listing
Modified Tue Jun 3 21:18:51 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: add field to specify name of model to be built

Revision 6963  Directory Listing
Modified Tue Jun 3 19:47:35 2008 UTC (9 years, 3 months ago) by davisb
Original Path: trunk
ENH: change EMSegment Simple module to use slicer volumes rather than filenames for input and output parameters

Revision 6961  Directory Listing
Modified Tue Jun 3 19:33:50 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: EMSegmenter command line module uses the storage node to write out files, which checks for relative file paths, so here we need to take into account a possible shared memory location

Revision 6959  Directory Listing
Modified Mon Jun 2 20:10:28 2008 UTC (9 years, 3 months ago) by davisb
Original Path: trunk
ENH: an even better warning message for global priors

Revision 6958  Directory Listing
Modified Mon Jun 2 20:01:08 2008 UTC (9 years, 3 months ago) by davisb
Original Path: trunk
ENH: enhance warning message for invalid global priors

Revision 6957  Directory Listing
Modified Mon Jun 2 19:09:34 2008 UTC (9 years, 3 months ago) by millerjv
Original Path: trunk
BUG: teem configuration was inconsistent between genlib and genlib2

Revision 6956  Directory Listing
Modified Mon Jun 2 16:23:00 2008 UTC (9 years, 3 months ago) by davisb
Original Path: trunk
ENH: right-click now allows editing of input channel weights; add some tooltip help strings

Revision 6955  Directory Listing
Modified Mon Jun 2 10:04:02 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: fix inclusion of headers. Need an update VTK 5.2

Revision 6954  Directory Listing
Modified Sat May 31 20:38:55 2008 UTC (9 years, 3 months ago) by bess
Original Path: trunk
BUG: Need to do coordinate system conversion in the inverse too

Revision 6953  Directory Listing
Modified Sat May 31 17:31:15 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: fix some minor installation issues; the Python modules are now found correctly. The Qdec module doesn't complain anymore. In general, the Tcl/Python subtree structure for each module is kept in the installation tree or build tree, so it should be easy to understand where files are coming from. Thanks to Dan and Luca for the feedback.

Revision 6952  Directory Listing
Modified Fri May 30 23:19:14 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: fixing branch/trunk confusion

Revision 6951  Directory Listing
Modified Fri May 30 22:37:03 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
ENH: change version numbers to 3.3 alpha

Revision 6948  Directory Listing
Modified Fri May 30 22:03:56 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: fix calculation of transformed volume coordinates

Revision 6945  Directory Listing
Modified Fri May 30 21:40:37 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: port fix from main branch

Revision 6943  Directory Listing
Modified Fri May 30 19:24:48 2008 UTC (9 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed bug in scene snapshot menu button updates on scene load and close

Revision 6941  Directory Listing
Modified Fri May 30 17:28:02 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: turn on vtk parallel support (for use with IGSTK and OpenIGTLink)

Revision 6939  Directory Listing
Modified Fri May 30 15:55:27 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: Take space out of name, refer to new QdecModule name

Revision 6938  Directory Listing
Modified Fri May 30 15:54:37 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: update the name so that the tcl init function can be found

Revision 6937  Directory Listing
Modified Fri May 30 15:51:48 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: turn off modified events when settin the TempURLString

Revision 6936  Directory Listing
Modified Fri May 30 15:50:37 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
STYLE: remove dead code

Revision 6935  Directory Listing
Modified Fri May 30 12:57:48 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: fix constructor calls to match inheritance on some editor effects

Revision 6934  Directory Listing
Modified Fri May 30 12:50:53 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: make right mouse button click perform apply during draw (also can be accessed by 'a' key and apply button

Revision 6933  Directory Listing
Modified Fri May 30 12:26:59 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: fix warnings about SQRT

Revision 6932  Directory Listing
Modified Thu May 29 23:04:59 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: deal with empty string when decoding as well

Revision 6931  Directory Listing
Modified Thu May 29 23:03:18 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: deal with emtpy string

Revision 6930  Directory Listing
Modified Thu May 29 23:01:00 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: trying to prevent corrupted strings when writing out command line module nodes

Revision 6929  Directory Listing
Modified Thu May 29 22:56:21 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
ENH: another approach to creating acquisistion-aligned slice planes so editor is always working with screen space aligned with voxel space

Revision 6928  Directory Listing
Modified Thu May 29 22:43:33 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: switch to fixed version of kwwidgets in preparation for release

Revision 6925  Directory Listing
Modified Thu May 29 19:47:57 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: use HelloSlicer instead

Revision 6924  Directory Listing
Modified Thu May 29 19:47:42 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: use HelloSlicer instead

Revision 6923  Directory Listing
Modified Thu May 29 19:47:34 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: use HelloSlicer instead

Revision 6922  Directory Listing
Modified Thu May 29 19:47:30 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: use HelloSlicer instead

Revision 6921  Directory Listing
Modified Thu May 29 19:25:51 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: fix ordering

Revision 6920  Directory Listing
Modified Thu May 29 19:22:36 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: hide testing tricks inside a macro

Revision 6919  Directory Listing
Modified Thu May 29 19:22:15 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: remove Slicer3_BUILD_TYPE. This is not reliable, one can not use that for external plugins, not only is that variable empty for compilers that are actually adding a subdir like Release/Debug/RelDebWithInfo, but the fact that Slicer3 was built in that mode does *not* mean an external plugin was built in that mode (or even the same generator).

Revision 6918  Directory Listing
Modified Thu May 29 18:27:31 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: start of fix out-of-plane editing (rotate sliceNode plane to match acquisition plane of image)

Revision 6915  Directory Listing
Modified Thu May 29 16:54:38 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: don't try to delete shared object files

Revision 6914  Directory Listing
Modified Thu May 29 15:23:46 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
STYLE: revert to non-macro version and reenable string free (bug was elsehwere)

Revision 6913  Directory Listing
Modified Thu May 29 15:17:22 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: set build type for tests in getbuildtest2

Revision 6912  Directory Listing
Modified Thu May 29 14:20:38 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: return value from URLDecodeString should not be freed

Revision 6911  Directory Listing
Modified Thu May 29 13:45:10 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: avoid crash by not freeing TempURLString - this leaks strings but real fix is unclear at the moment

Revision 6910  Directory Listing
Modified Thu May 29 13:25:53 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
STYLE: use the Set macro rather than deleting string directly

Revision 6909  Directory Listing
Modified Thu May 29 02:59:39 2008 UTC (9 years, 3 months ago) by blezek
Original Path: trunk
BUG: Incorrect python information for Linux and Mac OSX

Revision 6907  Directory Listing
Modified Wed May 28 23:44:10 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: export the build type for use by external plugins

Revision 6906  Directory Listing
Modified Wed May 28 22:55:43 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: updated to match HelloWorld/CMakeLists.txt

Revision 6905  Directory Listing
Modified Wed May 28 21:49:46 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
COMP: getting rid of compiler warnings, each control path should return a value

Revision 6904  Directory Listing
Modified Wed May 28 21:44:29 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
COMP: removing compiler warning about un/signed mismatch

Revision 6903  Directory Listing
Modified Wed May 28 21:39:21 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
COMP: getting rid of compiler warnings, return the medium font size if unknown input string

Revision 6902  Directory Listing
Modified Wed May 28 19:23:22 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: fix build warnings

Revision 6901  Directory Listing
Modified Wed May 28 18:47:14 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: renamed to HelloSlicer

Revision 6900  Directory Listing
Modified Wed May 28 18:44:28 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: disambiguating between tutorial files and this one for developer level testing

Revision 6899  Directory Listing
Modified Wed May 28 18:28:54 2008 UTC (9 years, 3 months ago) by francois_budin
Original Path: trunk
BUG: Correction of a problem when reading a ITK transform file

Revision 6898  Directory Listing
Modified Wed May 28 17:01:06 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: Qdec for a module name conflicts with Libs/Qdec 

Revision 6897  Directory Listing
Modified Wed May 28 16:52:18 2008 UTC (9 years, 3 months ago) by francois_budin
Original Path: trunk
BUG: the module was not reading the transformation file properly

Revision 6895  Directory Listing
Modified Wed May 28 16:25:28 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: taking Module out of QdecModule name so it should work as a loadable module. First step: svn copy from QdecModule to Qdec

Revision 6894  Directory Listing
Modified Wed May 28 15:04:41 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: use a local variable to manage memory for URLEncode and DecodeString, bug 202

Revision 6893  Directory Listing
Modified Wed May 28 14:57:31 2008 UTC (9 years, 3 months ago) by alexy
Original Path: trunk
ENH: fixed modify since read flag when creating a label map from editor

Revision 6892  Directory Listing
Modified Wed May 28 13:49:59 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: fix warnings

Revision 6891  Directory Listing
Modified Wed May 28 04:38:39 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: the ITKFactories plugin are .dylib, copied to .so, but the .so were never installed. Fixed.

Revision 6890  Directory Listing
Modified Tue May 27 23:27:05 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: fix ITKFactories issues again

Revision 6889  Directory Listing
Modified Tue May 27 22:44:06 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: Plugins and Modules have specific location for their binairies/dll, different from the usual bin/ and lib/ (i.e. lib/Slicer3/Plugins, lib/Slicer3/Modules). This was achieved by setting LIBRARY_OUTPUT_PATH and EXECUTABLE_OUTPUT_PATH from the slicer3_set_default_modules_output_path and slicer3_set_default_plugins_output_path macro, but it is a dangerous practice to override a global variable, as it propagates to subtrees. As a result, SlicerTractographySeeding, which combines a module and a CLP in the same CMakeLists, was not built to the proper directory; ExtractSkeleton was not output in the right location either, and several tests ended up in Plugins instead of bin/ (GaussianBlurImageFilterTest, OrientImageTest). Fix this by creating a macro that will set the LIBRARY_OUTPUT_DIRECTORY and RUNTIME_OUTPUT_DIRECTORY explicitly on a *target* basis, using SET_TARGET_PROPERTIES. This removes the side-effects described above.

Revision 6888  Directory Listing
Modified Tue May 27 22:36:34 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: apparently the Forward Launcher has issue with space in paths on WIN32. It's OK, we didn't really need it on Windows.

Revision 6887  Directory Listing
Modified Tue May 27 22:36:24 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: apparently the Forward Launcher has issue with space in paths on WIN32. It's OK, we didn't really need it on Windows.

Revision 6886  Directory Listing
Modified Tue May 27 21:50:06 2008 UTC (9 years, 3 months ago) by hayes
Original Path: trunk
COMP: Added flags to make .deb and .rpm packages

Revision 6885  Directory Listing
Modified Tue May 27 21:36:57 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: fix launcher on Win32

Revision 6884  Directory Listing
Modified Tue May 27 21:36:48 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: fix launcher on Win32

Revision 6883  Directory Listing
Modified Tue May 27 21:06:45 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: since the path to the OpenGL lib is traditionally not exported from an installed dir, try to help Slicer3's external developpers by finding it and adding it to the link directories. Useful for Mesa3D users for example

Revision 6882  Directory Listing
Modified Tue May 27 20:43:05 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: finally, added launchers for GenerateCLP and GenerateLM so that they can be used from an installed Slicer3.

Revision 6881  Directory Listing
Modified Tue May 27 20:18:55 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: set TEST_MODE variable to control tcl test scripts.  Also use correct path separator for platform (: for unis ; for windows)

Revision 6880  Directory Listing
Modified Tue May 27 20:09:51 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: fix to load files with special characters like []

Revision 6879  Directory Listing
Modified Tue May 27 20:09:01 2008 UTC (9 years, 3 months ago) by naucoin
Original Path: trunk
BUG: fix to load dicom directories with possible glob-able characters like []

Revision 6878  Directory Listing
Modified Tue May 27 19:26:52 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: never use CMAKE_INSTALL_PREFIX in INSTALL()

Revision 6877  Directory Listing
Modified Tue May 27 17:32:49 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: fix POST_BUILD issue by using SET_TARGET_PROPERTIES

Revision 6876  Directory Listing
Modified Tue May 27 14:40:31 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: argh, should have seen this one coming

Revision 6875  Directory Listing
Modified Tue May 27 14:23:56 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
COMP: update to turn off python and  reflect new incr tcl and incr tk cmake files

Revision 6874  Directory Listing
Modified Tue May 27 11:16:18 2008 UTC (9 years, 3 months ago) by blezek
Original Path: trunk
BUG: extra character at the end of a TCL statement

Revision 6873  Directory Listing
Modified Tue May 27 05:18:44 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: fix the forward launcher on Unix. The KWW launcher was removed, but let's keep this one around for debugging, and to double-check that it does really take some time before the splashscreen comes up (a time that will go down as we move more and more functionalities into loadable modules)

Revision 6872  Directory Listing
Modified Tue May 27 04:56:49 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: fix the forward launcher on Unix. The KWW launcher was removed, but let's keep this one around for debugging, and to double-check that it does really take some time before the splashscreen comes up (a time that will go down as we move more and more functionalities into loadable modules)

Revision 6871  Directory Listing
Modified Tue May 27 04:05:22 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: fix the forward launcher on Unix. The KWW launcher was removed, but let's keep this one around for debugging, and to double-check that it does really take some time before the splashscreen comes up (a time that will go down as we move more and more functionalities into loadable modules)

Revision 6870  Directory Listing
Modified Tue May 27 03:54:10 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: fix the forward launcher on Win32. The KWW launcher was removed, but let's keep this one around for debugging, and to double-check that it does really take some time before the splashscreen comes up (a time that will go down as we move more and more functionalities into loadable modules)

Revision 6869  Directory Listing
Modified Tue May 27 02:29:29 2008 UTC (9 years, 3 months ago) by blezek
Original Path: trunk
ENH: Adding Python support to getbuildtcl.tcl.  Now building for Windows and Mac OSX, Linux not yet tested.  Needed to check in Python 2.5 binaries into SVN for Windows

Revision 6868  Directory Listing
Modified Mon May 26 19:50:20 2008 UTC (9 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: commented out the SceneSnapshot widget in DataGUI since that's now represented in the ViewControlGUI's top-level GUI panel.

Revision 6867  Directory Listing
Modified Mon May 26 19:41:56 2008 UTC (9 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed debug leaks in scene snapshot by deleting a reference in the snapshot node's StoreScene method...

Revision 6866  Directory Listing
Modified Mon May 26 19:08:15 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: need to point to our Tcl/Tk for linking as well

Revision 6865  Directory Listing
Modified Mon May 26 18:52:59 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: aw, Visual Studio 2005, will you ever stop ruining my day. Apparently the build subdir (Debug, Release, MinRelDeb, etc) can also exist in all lowercase...

Revision 6864  Directory Listing
Modified Mon May 26 17:58:12 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: add IncrTCL path as well

Revision 6863  Directory Listing
Modified Mon May 26 17:34:38 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: add much nicer GUI in the "Preferences -> Module Settings" dialog; one can now use a file browser dialog to pick module paths (even several at the same time), and enable/disable them at will without having to remove them. KWWidges's new vtkKWDirectoryPresetSelector class is required (update your KWWidgets)

Revision 6862  Directory Listing
Modified Mon May 26 16:45:57 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
BUG: fix Package/CMakeLists.txt so that external Tcl/Tk (and/or 8.5) can be installed too and use install(DIRECTORY

Revision 6861  Directory Listing
Modified Mon May 26 15:39:57 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
BUG: fix launch.tcl since it was implying Slicer3's build dir (Debug, Release, MinRelDeb, etc) was the same as VTK/ITK/KWWidgets/Teem; they can be different, i.e. build Slicer3 against a VTK built with "nmake". Install Tcl/Tk in lib/TclTk instead of lib/Slicer3/lib/tcl  to keep lib/Slicer3 for its own use. Fix many many hardcoded Tcl 8.4 paths (also for IncrTcl 3.2, to allow 3.4). Add IncrTcl to Win32's PATH too. etc.

Revision 6860  Directory Listing
Modified Mon May 26 15:35:35 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: important workaround to allow people to use an installed Slicer3 to build modules, even with a different generator or a compiler installed at a different location; it still has to be the same compiler version. Win32.

Revision 6859  Directory Listing
Modified Mon May 26 15:34:58 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: important workaround to allow people to use an installed Slicer3 to build modules, even with a different generator or a compiler installed at a different location; it still has to be the same compiler version. Win32.

Revision 6858  Directory Listing
Modified Mon May 26 15:29:10 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
BUG: fix so that an external Tcl/Tk (and/or a bundled 8.5, not 8.4) can be installed/used too

Revision 6857  Directory Listing
Modified Mon May 26 15:27:28 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
BUG: fix LoadableModule installation scripts, they were busted (the installation directory was hard-coded)

Revision 6856  Directory Listing
Modified Mon May 26 15:26:20 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: install Tcl/Tk in lib/TclTk instead of lib/Slicer3/lib/tcl to keep lib/Slicer3 for its own use.

Revision 6855  Directory Listing
Modified Mon May 26 15:25:04 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: install Tcl/Tk in lib/TclTk instead of lib/Slicer3/lib/tcl to keep lib/Slicer3 for its own use. Remove KWWidgets launcher (the binary one, the scripts are kept)

Revision 6854  Directory Listing
Modified Mon May 26 15:23:10 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: added slicer3_install_modules and slicer3_install_plugins macro to hide the big INSTALL() command that was used to install plugins/modules; this is more elegant, and enable us to have better control on installation by modifying just one file.

Revision 6853  Directory Listing
Modified Mon May 26 15:21:20 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: add much nicer GUI in the "Preferences -> Module Settings" dialog; one can now use a file browser dialog to pick module paths (even several at the same time), and enable/disable them at will without having to remove them. KWWidges's new vtkKWDirectoryPresetSelector class is required (update your KWWidgets)

Revision 6852  Directory Listing
Modified Mon May 26 15:20:54 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: add much nicer GUI in the "Preferences -> Module Settings" dialog; one can now use a file browser dialog to pick module paths (even several at the same time), and enable/disable them at will without having to remove them. KWWidges's new vtkKWDirectoryPresetSelector class is required (update your KWWidgets)

Revision 6851  Directory Listing
Modified Mon May 26 15:17:26 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: added slicer3_install_modules and slicer3_install_plugins macro to hide the big INSTALL() command that was used to install plugins/modules; this is more elegant, and enable us to have better control on installation by modifying just one file.

Revision 6850  Directory Listing
Modified Mon May 26 15:16:49 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: minor, VTK was not exporting all its VolumeRendering headers

Revision 6849  Directory Listing
Modified Mon May 26 15:14:49 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
BUG: the QueryAtlas module uses VTK's FreeType, which is not quite exported correctly by an
installed VTK. It's not obvious however if FreeType should be exposed directly by VTK, but this is an easy fix (add the include dir, and make sure VTK install FreeType's headers).

Revision 6848  Directory Listing
Modified Mon May 26 15:11:28 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: added slicer3_install_modules and slicer3_install_plugins macro to hide the big INSTALL() command that was used to install plugins/modules; this is more elegant, and enable us to have better control on installation by modifying just one file.

Revision 6847  Directory Listing
Modified Mon May 26 15:10:50 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: added slicer3_install_modules and slicer3_install_plugins macro to hide the big INSTALL() command that was used to install plugins/modules; this is more elegant, and enable us to have better control on installation by modifying just one file.

Revision 6846  Directory Listing
Modified Mon May 26 15:09:42 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: minor, just align the style with LoadableModule

Revision 6845  Directory Listing
Modified Mon May 26 15:08:45 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
BUG: fix LoadableModule installation scripts, they were busted (the installation directory was hard-coded)

Revision 6844  Directory Listing
Modified Mon May 26 15:07:49 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
BUG: fix GenerateCLP and GenerateLM  for "nmake" and mixed quoted and unquoted arguments with spaces in paths (damn Microsoft compiler)

Revision 6843  Directory Listing
Modified Mon May 26 15:07:36 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
BUG: fix GenerateCLP and GenerateLM  for "nmake" and mixed quoted and unquoted arguments with spaces in paths (damn Microsoft compiler)

Revision 6842  Directory Listing
Modified Mon May 26 15:04:40 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: added slicer3_install_modules and slicer3_install_plugins macro to hide the big INSTALL() command that was used to install plugins/modules; this is more elegant, and enable us to have better control on installation by modifying just one file.

Revision 6841  Directory Listing
Modified Mon May 26 15:03:04 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
BUG: fix Package/CMakeLists.txt so that external Tcl/Tk (and/or 8.5) can be installed too and use install(DIRECTORY

Revision 6840  Directory Listing
Modified Mon May 26 15:01:28 2008 UTC (9 years, 3 months ago) by barre
Original Path: trunk
ENH: let's make it so that we can use 8.5 too

Revision 6839  Directory Listing
Modified Fri May 23 16:31:50 2008 UTC (9 years, 3 months ago) by pieper
Original Path: trunk
BUG: fix the icon file and icon resources in launcher

Revision 6838  Directory Listing
Modified Fri May 23 02:01:56 2008 UTC (9 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: included Scene snapshot functionality in ViewControlGUI. Introduces some debug leaks to trackdown...

Revision 6836  Directory Listing
Modified Thu May 22 23:43:59 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: update for space in paths and lib prefix

Revision 6834  Directory Listing
Modified Thu May 22 22:41:38 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: switch to svn mirror of teem to include a fix for installing the libraries (used when we package slicer)

Revision 6833  Directory Listing
Modified Thu May 22 22:31:01 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: more cleanup to allow LoadableModule to be loaded from the Module Search Paths (i.e. outside Slicer3). Provide API to retrieve module's resources paths from either locations (inside or outside a Slicer3's build/installed tree)

Revision 6832  Directory Listing
Modified Thu May 22 22:28:18 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: added missing colour, converted from 0.16 0.65 1 in Abdomen-05-2008.mrml

Revision 6831  Directory Listing
Modified Thu May 22 22:04:34 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
BUG: fix unitialized value. I guess nobody ever used that one, right?

Revision 6830  Directory Listing
Modified Thu May 22 21:20:15 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: more fix for space in paths. This will take forever.

Revision 6829  Directory Listing
Modified Thu May 22 20:53:09 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: MRMLManager not initialized when code was moved to be a loadable module

Revision 6828  Directory Listing
Modified Thu May 22 20:35:28 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: clean

Revision 6827  Directory Listing
Modified Thu May 22 20:20:04 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: clean

Revision 6826  Directory Listing
Modified Thu May 22 20:18:52 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: clean

Revision 6825  Directory Listing
Modified Thu May 22 20:17:55 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: more macros

Revision 6824  Directory Listing
Modified Thu May 22 19:55:05 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: clean

Revision 6823  Directory Listing
Modified Thu May 22 18:12:34 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: fix more evil when spaces in paths are involved. On Win32 (nmake mode), if the path to GENERATECLP_EXE had a space, *and* the second parameter to it had no space, and the third had spaces, then GENERATECLP_EXE would be quoted, the third arg as well, but the second wouldn't; at this point either tclap or nmake apparently would totally choke with the combinations of quoted and non-quoted arguments, and the second argument would be split in strange ways that would ultimately prevent generateclp from working (e.g. d:/foo/bar would end up as two d: and /foo/bar args). Lost hours on that. The trick, I'm afraid, is too use valued arguments everywhere, which is what I changed here by adding --InputXML and --OutputCxx

Revision 6821  Directory Listing
Modified Thu May 22 16:42:20 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: VERBATIM is still not the default in ADD_CUSTOM_COMMAND but this is really the way to go if you want to be able to deal with spaces *and* parenthesis in your path on unix

Revision 6820  Directory Listing
Modified Thu May 22 16:39:32 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: VERBATIM is still not the default in ADD_CUSTOM_COMMAND but this is really the way to go if you want to be able to deal with spaces *and* parenthesis in your path on unix. More TRICKY, on Win32, if the path to GENERATELM_EXE had a space, *and* the second parameter to it had no space, and the third and fourth had spaces, then GENERATELM_EXE would be quoted, the third and fourth as well, but the second wouldn't (technically no need to); at this point either tclap or nmake apparently would choke with the combinations of quoted and non-quoted arguments, and the second argument would be split in strange ways (i.e. d:/foo/bar would end up as d: and /foo/bar args). Lost hour on that.

Revision 6819  Directory Listing
Modified Thu May 22 16:37:05 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: VERBATIM is still not the default in ADD_CUSTOM_COMMAND but this is really the way to go if you want to be able to deal with spaces *and* parenthesis in your path on unix

Revision 6818  Directory Listing
Modified Thu May 22 15:56:54 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix test paths for EMSegment

Revision 6817  Directory Listing
Modified Thu May 22 15:43:56 2008 UTC (9 years, 4 months ago) by hliu
Original Path: trunk
ENH: delete directory NeuroNav.

Revision 6816  Directory Listing
Modified Thu May 22 15:37:34 2008 UTC (9 years, 4 months ago) by hliu
Original Path: trunk
ENH: removed NeuroNav module from Module list. Will make it a loadable module.

Revision 6815  Directory Listing
Modified Thu May 22 15:36:19 2008 UTC (9 years, 4 months ago) by hliu
Original Path: trunk
ENH: removed NeuroNav module from Module list. Will make it a loadable module.

Revision 6814  Directory Listing
Modified Thu May 22 14:20:49 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: example command line module that can be built outside of slicer3

Revision 6813  Directory Listing
Modified Thu May 22 13:59:53 2008 UTC (9 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: ViewControl image data and resources

Revision 6812  Directory Listing
Modified Thu May 22 12:20:04 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix variable scoping issue (declaring loop variable in for statement)

Revision 6811  Directory Listing
Modified Thu May 22 11:24:26 2008 UTC (9 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: modified view control GUI to expose scene snapshot functionality -- logic is not yet included

Revision 6810  Directory Listing
Modified Thu May 22 10:24:24 2008 UTC (9 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: modified the SliceControllerWidget interface to use a menubutton with a drop down menu of options, rather than arraying them all at the top level. This makes the interface cleaner and more compact, and give more room for the slice scroller, at the expense of hiding functionality under the drop-down.

Revision 6809  Directory Listing
Modified Thu May 22 05:58:21 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: oops

Revision 6808  Directory Listing
Modified Thu May 22 05:58:05 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: display a warning, this was pretty useful to debug a mishap in MRML

Revision 6807  Directory Listing
Modified Thu May 22 04:47:43 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: actually a little trickier. Do not put Find(Slicerlibcurl) in Modules/, since this whole subdir can be built independently. Put it in the top dir. Building against an installed Slicer3 should not bring the slicerlibcurl dependency anyway since it was built STATIC, the problem seems to be for modules built from the source tree directly, not external modules. I'd rather not pollute Modules/CMakeLists.txt

Revision 6806  Directory Listing
Modified Thu May 22 04:22:42 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: that's a little puzzling, slicerlibcurl was pulled lout before automatically, but it seems the LINK_DIRECTORY is set to low, in Base/GUI or Libs/RemoteIO. If any modules linked against those two, they need slicerlibcurl as well...

Revision 6805  Directory Listing
Modified Thu May 22 00:16:40 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: start working out the issues with space in paths. If we want to be able to install to "C:\Program Files" we *have* to test those issues and have dashboard with spaces.

Revision 6804  Directory Listing
Modified Wed May 21 23:57:18 2008 UTC (9 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updating image data for Slice Controller widget

Revision 6803  Directory Listing
Modified Wed May 21 23:25:36 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: make sure all sub-project in Libs/ can be built in a standalone fashion (remove 99% of the refs to Slicer3, macros, etc). Make sure all external toolkits are properly included, and fix some issues in MRML with respect to TEEM/vtkTeem.

Revision 6802  Directory Listing
Modified Wed May 21 21:16:46 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: avoid an event loop that could cause the slice nodes to get out of sync with the window aspect ratio

Revision 6801  Directory Listing
Modified Wed May 21 21:11:43 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix windows export macros to avoid name clash with vtk volume rendering macro

Revision 6800  Directory Listing
Modified Wed May 21 21:04:48 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: return after adding the create new parameters option

Revision 6799  Directory Listing
Modified Wed May 21 20:55:58 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: needed to rename the VolumeRenderingModule to be plain VolumeRendering so that the library name matches the name used in the loadable module (so tcl commands could be properly linked in the interpreter).  And besides, VolumeRendering is less redundant that VolumeRenderingModule and more consistent with other modules

Revision 6798  Directory Listing
Modified Wed May 21 20:55:40 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: needed kww header to access internal widget

Revision 6797  Directory Listing
Modified Wed May 21 20:53:15 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: needed to rearrange module list so EMSegment could include volume header files

Revision 6796  Directory Listing
Modified Wed May 21 20:36:00 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: remove references to VolumeRenderingModule (now loadable)

Revision 6795  Directory Listing
Modified Wed May 21 19:09:53 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: set node to be non-modified after read

Revision 6794  Directory Listing
Modified Wed May 21 17:53:26 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: stat fixing problem with space in paths

Revision 6793  Directory Listing
Modified Wed May 21 14:57:51 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
COMP: disable template warnings in windows

Revision 6792  Directory Listing
Modified Wed May 21 12:54:59 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: disable range widgets when not in use - bug fix provided by Peter Wainwright

Revision 6791  Directory Listing
Modified Wed May 21 00:02:20 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: try to avoid render corruption issue on linux by backing out slicer-specific subclass

Revision 6790  Directory Listing
Modified Tue May 20 23:13:08 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: added error checking so that you can press Next to view the workflow steps w/o setting paramters w/o crashing

Revision 6789  Directory Listing
Modified Tue May 20 21:25:28 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
COMP: removing unused variables

Revision 6788  Directory Listing
Modified Tue May 20 21:18:32 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: added the info about how to plot results

Revision 6787  Directory Listing
Modified Tue May 20 21:15:19 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
COMP: removed unused variable

Revision 6786  Directory Listing
Modified Tue May 20 20:30:23 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: resizing the render window interactor if needed when make the plane widgets visible

Revision 6785  Directory Listing
Modified Tue May 20 19:33:29 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: added some missing model file extensions

Revision 6784  Directory Listing
Modified Tue May 20 19:21:36 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: avoid VS2005 annoying warnings

Revision 6783  Directory Listing
Modified Tue May 20 19:19:23 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: made some event loop optimizaation changes for volume display

Revision 6782  Directory Listing
Modified Tue May 20 17:38:43 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: clean up fiducial list and scene if created

Revision 6781  Directory Listing
Modified Tue May 20 17:34:14 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: make sure external CLI Plugins *are* loaded. Slicer3_BUILD_CLI is used to control if the (huge list of) default Slicer3 Plugins are actually built, but should not prevent external plugins from being loaded (as well as the Python plugins).

Revision 6780  Directory Listing
Modified Tue May 20 16:18:42 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: fix ordering issue with vs2005

Revision 6779  Directory Listing
Modified Tue May 20 14:01:07 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: divide EMsegment test paths into those which only exist in the build tree and those which are installed as part of slicer

Revision 6778  Directory Listing
Modified Tue May 20 11:36:57 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: add empty cmake file to avoid configure warning/error

Revision 6777  Directory Listing
Modified Tue May 20 07:33:10 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: Slicer3 Spring Installation Clean Up

Revision 6776  Directory Listing
Modified Tue May 20 07:32:39 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: Slicer3 Spring Installation Clean Up

Revision 6775  Directory Listing
Modified Tue May 20 07:31:33 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: Slicer3 Spring Installation Clean Up

Revision 6774  Directory Listing
Modified Tue May 20 07:31:11 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: Slicer3 Spring Installation Clean Up

Revision 6773  Directory Listing
Modified Tue May 20 07:29:59 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: Slicer3 Spring Installation Clean Up

Revision 6772  Directory Listing
Modified Tue May 20 07:29:06 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: Slicer3 Spring Installation Clean Up

Revision 6771  Directory Listing
Modified Tue May 20 07:26:07 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: Slicer3 Spring Installation Clean Up

Revision 6770  Directory Listing
Modified Tue May 20 07:25:01 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: Slicer3 Spring Installation Clean Up

Revision 6769  Directory Listing
Modified Tue May 20 07:24:26 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: Slicer3 Spring Installation Clean Up

Revision 6768  Directory Listing
Modified Tue May 20 07:23:12 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: Slicer3 Spring Installation Clean Up

Revision 6767  Directory Listing
Modified Tue May 20 00:08:34 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
ENH obsolete, replaced  by QueryAtlas.txt

Revision 6766  Directory Listing
Modified Tue May 20 00:06:40 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
ENH removing unused code, should have been deleted as part of the copy from GenerateCLP

Revision 6765  Directory Listing
Modified Mon May 19 20:58:56 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: oops, didn't realise this was disabling all cli's, rather than just auto detect

Revision 6764  Directory Listing
Modified Mon May 19 20:33:55 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: backing out changes that were causing problems on start up: pixelated windows

Revision 6763  Directory Listing
Modified Mon May 19 20:33:37 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: backing out changes that were causing problems on start up: long load time

Revision 6762  Directory Listing
Modified Mon May 19 16:24:56 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: added a test to add lots of fiducials, trying to track down leaks when create a list in the tkcon

Revision 6761  Directory Listing
Modified Mon May 19 05:30:33 2008 UTC (9 years, 4 months ago) by bess
Original Path: trunk
BUG: Fix the cloning function to clone the bspline properly

Revision 6760  Directory Listing
Modified Mon May 19 05:23:42 2008 UTC (9 years, 4 months ago) by bess
Original Path: trunk
ENH: merge from r6759 of bess_bspline branch into trunk

Revision 6756  Directory Listing
Modified Sun May 18 14:29:38 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: speed up switching volume display GUIs

Revision 6755  Directory Listing
Modified Sun May 18 13:58:14 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: work around issue where window sizes of 10x10 are incorrectly reported

Revision 6753  Directory Listing
Modified Sat May 17 23:32:06 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: re-enable command line module discovery by default

Revision 6751  Directory Listing
Modified Sat May 17 16:48:40 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: set window/level sliders for auto mode 

Revision 6746  Directory Listing
Modified Fri May 16 22:43:34 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: modifications to work with automated testing system as well as direct source into running slicer

Revision 6745  Directory Listing
Modified Fri May 16 21:50:52 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: since the fiducial list node uses 'fake' fiducial nodes, have to manually check if disable modified is not true on the list before invoking fiducial modified events. This change will speed up adding lists of fiducials from parsed text files if DisableModifiedEventOn is used.

Revision 6744  Directory Listing
Modified Fri May 16 21:43:29 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: enable modified before call modified. Added number of fids to add

Revision 6743  Directory Listing
Modified Fri May 16 20:00:43 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: re-arrange build order to satisfy dependencies

Revision 6742  Directory Listing
Modified Fri May 16 19:46:29 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
ENH: adding a test script to time adding 200 fiducials to the scene. Main delay is in the SetNthFiducialLabelText call

Revision 6741  Directory Listing
Modified Fri May 16 19:21:39 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: avoid duplicate CLI build

Revision 6732  Directory Listing
Modified Fri May 16 02:14:46 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: add --test-mode option to avoid test failures due to timeous on exit confirmation dialog

Revision 6730  Directory Listing
Modified Thu May 15 19:59:23 2008 UTC (9 years, 4 months ago) by francois_budin
Original Path: trunk
BUG: Better handling of ITKTransformFiles

Revision 6720  Directory Listing
Modified Thu May 15 10:51:46 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: enable ITK revew classes and regstration optimization

Revision 6719  Directory Listing
Modified Thu May 15 03:42:55 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: another fix; the Slicer3 lib directory was testing by checking for a file from the Modules directory. Those do not get installed if you build a core Slicer3 (BUILD_MODULES and BUILD_CLI = OFF), and even if On, modules file should/will not end-up here.

Revision 6718  Directory Listing
Modified Thu May 15 03:18:16 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: compute window/level and threshold range for a new image

Revision 6717  Directory Listing
Modified Thu May 15 01:59:21 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
BUG: can not include this file if modules are not built (i.e. core Slicer)

Revision 6716  Directory Listing
Modified Wed May 14 21:13:14 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: fixed volume vector series read

Revision 6715  Directory Listing
Modified Wed May 14 18:14:37 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
ENH: experimental script to read FreeSurfer .label file and display as a contour widget. Only works with VTK 5.2 and up.

Revision 6714  Directory Listing
Modified Wed May 14 17:47:44 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
ENH: add the new label extension for freesurfer overlays

Revision 6713  Directory Listing
Modified Wed May 14 17:47:39 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
ENH: add support for FreeSurfer .label files

Revision 6712  Directory Listing
Modified Wed May 14 17:13:28 2008 UTC (9 years, 4 months ago) by aylward
Original Path: trunk
ENH: Version for review


Revision 6711  Directory Listing
Modified Wed May 14 15:13:06 2008 UTC (9 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: made some changes to loadable QueryAtlas -- GUI was not observing mrml scene events

Revision 6710  Directory Listing
Modified Wed May 14 13:04:26 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: enable slice plane widgets with 'o' key in slice window

Revision 6709  Directory Listing
Modified Wed May 14 02:18:49 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
ENH: enabling VolumeRendering as a loadable module

Revision 6708  Directory Listing
Modified Wed May 14 01:14:40 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: remove error msg from ReadData

Revision 6707  Directory Listing
Modified Tue May 13 22:17:27 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix typo in widget constructor

Revision 6706  Directory Listing
Modified Tue May 13 21:54:31 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: add visibility state for slice node widget

Revision 6705  Directory Listing
Modified Tue May 13 21:53:11 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: add slice plane widget

Revision 6704  Directory Listing
Modified Tue May 13 21:47:52 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: generate error for bad font value

Revision 6703  Directory Listing
Modified Tue May 13 21:24:49 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: set the newly loaded model to be the active one in the model hiearchy widget

Revision 6702  Directory Listing
Modified Tue May 13 20:43:08 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: need to set input to the append components each time the image data changes

Revision 6701  Directory Listing
Modified Tue May 13 19:38:26 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: let the scene know that a new node was added

Revision 6699  Directory Listing
Modified Tue May 13 17:53:57 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: switch to slicer-specific subclass of render widget to bypass the call to ProcessPendingEvents in the Expose callback

Revision 6698  Directory Listing
Modified Tue May 13 16:29:57 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: fixed conflict between memebr vaiable and parameter

Revision 6697  Directory Listing
Modified Tue May 13 16:17:46 2008 UTC (9 years, 4 months ago) by zack.galbreath
Original Path: trunk
ENH: commits work

Revision 6696  Directory Listing
Modified Tue May 13 16:17:30 2008 UTC (9 years, 4 months ago) by zack.galbreath
Original Path: trunk
ENH: test committing

Revision 6695  Directory Listing
Modified Tue May 13 01:33:06 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
BUG: updating module name so that the derived name for TCL init will match that already in use

Revision 6694  Directory Listing
Modified Tue May 13 00:15:25 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: new slice plane widget class for 2D/3D interaction

Revision 6693  Directory Listing
Modified Mon May 12 21:36:45 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: fixed ImageLabelCombine

Revision 6692  Directory Listing
Modified Mon May 12 19:38:13 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: try fixing some warnings (as I encounter them).

Revision 6691  Directory Listing
Modified Mon May 12 12:42:34 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: more fleshed out plane widget test

Revision 6690  Directory Listing
Modified Mon May 12 12:26:50 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: snippet of code to test plane widget in slicer

Revision 6685  Directory Listing
Modified Sat May 10 14:30:26 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix warning about int conversion

Revision 6684  Directory Listing
Modified Sat May 10 14:12:45 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: check for null string pointer

Revision 6683  Directory Listing
Modified Fri May 9 22:24:19 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: update menu on enter

Revision 6682  Directory Listing
Modified Fri May 9 22:23:36 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: avoid warnings if console is deleted before widget

Revision 6681  Directory Listing
Modified Fri May 9 21:57:48 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: add the look up table after we know we need it, was causing seg faults on render.

Revision 6680  Directory Listing
Modified Fri May 9 20:32:44 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: avoid memory leak when fiducials are part of scene

Revision 6679  Directory Listing
Modified Fri May 9 20:12:55 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: change to debug macro so doesn't print out by default

Revision 6678  Directory Listing
Modified Fri May 9 18:41:53 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: fixed ImageLabelCombine CLI module and vtkTEEM classes

Revision 6677  Directory Listing
Modified Fri May 9 17:25:10 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: added ImageLabelCombine CLI module and vtkTEEM classes

Revision 6676  Directory Listing
Modified Fri May 9 17:04:44 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: initialize tcl package before setting namespace variable for GUI instance so interpreter sees all subclass methods

Revision 6675  Directory Listing
Modified Fri May 9 14:49:35 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix typo in xml generator

Revision 6674  Directory Listing
Modified Fri May 9 14:29:11 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix thread safety problem with tensor estimation (backwards compatibility bug in VTK - GetRange now uses Information hash tables that are not thread safe)

Revision 6673  Directory Listing
Modified Fri May 9 13:19:51 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: wait until GUI builds before running test scripts

Revision 6672  Directory Listing
Modified Fri May 9 04:52:42 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
COMP: EMSegment depends on Volumes

Revision 6671  Directory Listing
Modified Fri May 9 04:47:37 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
BUG: this test takes waaaaaay to long when run by getbuildtest.tcl on Win32, seems to run fine within Studio. commenting back out

Revision 6670  Directory Listing
Modified Fri May 9 03:41:58 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
BUG: missed the vrModuleGUI->Delete when returning VolumeRenderingModule back as a "static" module

Revision 6669  Directory Listing
Modified Fri May 9 03:39:58 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
COMP: need to link against SlicerTractographyFiducialSeeding when building Volumes, at least on Win32

Revision 6668  Directory Listing
Modified Fri May 9 00:38:15 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
BUG: VRModule not yet ready as a loadable module

Revision 6667  Directory Listing
Modified Fri May 9 00:35:53 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
ENH: missed this module description file with the last checkin

Revision 6666  Directory Listing
Modified Thu May 8 23:50:44 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
ENH: adding dependency checking (but not sorting) to LoadableModule lib.  Adding EMSegment, MRAblation, RealTimeImaging, VolumeRendering, WFEngineModule, LabelStatistics as loadable modules

Revision 6665  Directory Listing
Modified Thu May 8 22:57:03 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: use SLICER_BUILD to avoid Debug/Release subdir issue when finding packages on windows

Revision 6664  Directory Listing
Modified Thu May 8 22:54:09 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
BUG: fixed crash after runtensor

Revision 6663  Directory Listing
Modified Thu May 8 22:36:58 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: be sure query atlas package is loaded before calling teardown proc

Revision 6662  Directory Listing
Modified Thu May 8 22:18:03 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix tcl packaging to make QueryAtlas a loadable module

Revision 6661  Directory Listing
Modified Thu May 8 22:10:03 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: undo/redo/restore only enabled for DWI

Revision 6660  Directory Listing
Modified Thu May 8 21:53:33 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: added UpdateMenu() call, as for some new reason the selector is not updated if a DTI is loaded in the volumes module.

Revision 6659  Directory Listing
Modified Thu May 8 21:48:30 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: avoid warnings about possible triglyph

Revision 6658  Directory Listing
Modified Thu May 8 21:38:31 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: new method name 

Revision 6657  Directory Listing
Modified Thu May 8 21:11:49 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: added rotation filter (not yet enabled), added glyph color by ColorOrientation as default

Revision 6656  Directory Listing
Modified Thu May 8 20:52:06 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: set the volume names before adding volume nodes to the scene, so data tree shows the correct string

Revision 6655  Directory Listing
Modified Thu May 8 20:26:55 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
STYLE: add warning comment

Revision 6654  Directory Listing
Modified Thu May 8 20:26:25 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: avoid null pointer problem

Revision 6653  Directory Listing
Modified Thu May 8 20:19:30 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: make query atlas into a purely loadable module (remove from Slicer3.cxx) to clean up memory leaks in Qdec

Revision 6652  Directory Listing
Modified Thu May 8 19:29:16 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
BUG: fixed crash in the constructor by changing vtkTransform *Transform = vtkTransform::New(); to this->Transform = vtkTransform::New();

Revision 6651  Directory Listing
Modified Thu May 8 17:29:39 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
ENH: put the new buttons side by side

Revision 6650  Directory Listing
Modified Thu May 8 13:59:48 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
COMP: Increments should be vtkIdType

Revision 6649  Directory Listing
Modified Thu May 8 11:59:05 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: provide missing method implementation

Revision 6648  Directory Listing
Modified Thu May 8 04:11:03 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
BUG: glyphs are updated correctly now after changing the the current tensorNode

Revision 6647  Directory Listing
Modified Wed May 7 22:48:11 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
ENH: added buttons to toggle saving all data or none

Revision 6646  Directory Listing
Modified Wed May 7 21:34:41 2008 UTC (9 years, 4 months ago) by rjosest
Original Path: trunk
ENH: New class to rotate tensors.

Revision 6645  Directory Listing
Modified Wed May 7 21:34:17 2008 UTC (9 years, 4 months ago) by rjosest
Original Path: trunk
ENH: New class to rotate tensors.

Revision 6644  Directory Listing
Modified Wed May 7 21:14:31 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
STYLE: remove extra ouput

Revision 6643  Directory Listing
Modified Wed May 7 21:12:31 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: incorrect label on volume

Revision 6642  Directory Listing
Modified Wed May 7 20:54:05 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: fixed bunch of bugs in window-level display

Revision 6641  Directory Listing
Modified Wed May 7 19:28:36 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: update to VTK 5.2, ITK 3.6, CMake 2.6 tcl/tk8.4.19 and make corresponding changes to getbuildtest build scripts

Revision 6640  Directory Listing
Modified Wed May 7 19:12:53 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
ENH: value checking before changes, typo fix, take out own recalc of auto levels

Revision 6639  Directory Listing
Modified Wed May 7 19:11:51 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
ENH: use the new calculate scalar auto levels call

Revision 6638  Directory Listing
Modified Wed May 7 19:10:45 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
ENH: moved the calculation of auto levels into the appropriate subclasses, trigger from update from mrml at the top volume level, which necessitated moving some of the diffusion nodes to be subclasses of the scalar volume node rather than just the volume node (rational: they need to call calculate scalar auto levels). Try to remove explicit triggers, rely on events to recalc auto win/level

Revision 6637  Directory Listing
Modified Wed May 7 19:06:51 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
ENH: updated the add archetype vol method to work with remote data handling infrastructure. Remove method for calculating auto levels

Revision 6636  Directory Listing
Modified Wed May 7 19:05:29 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: don't force changes in the win/levels

Revision 6635  Directory Listing
Modified Wed May 7 18:23:51 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: added special case for glyphs colored by orientation

Revision 6631  Directory Listing
Modified Wed May 7 16:17:40 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
STYLE: Renaming files

Revision 6630  Directory Listing
Modified Wed May 7 15:26:09 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: changed reference counting again. now ctests work and slicer doesn't crash.

Revision 6624  Directory Listing
Modified Tue May 6 19:09:24 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: handle reference counting in the widget

Revision 6621  Directory Listing
Modified Tue May 6 01:05:52 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENHENH: CreateTracts method has to be public for tcl

Revision 6620  Directory Listing
Modified Mon May 5 23:08:34 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: added last test

Revision 6619  Directory Listing
Modified Mon May 5 22:27:45 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: test works now :)

Revision 6618  Directory Listing
Modified Mon May 5 22:09:50 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: changes for tests

Revision 6609  Directory Listing
Modified Mon May 5 18:00:56 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: changed test for tract/glyphs test, not yet working properly 

Revision 6608  Directory Listing
Modified Mon May 5 17:51:14 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: explicitly turn of mac gui system to accomodate changed default for vtk build on mac

Revision 6604  Directory Listing
Modified Mon May 5 17:13:06 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
STYLE: remove redundance reference to Volumes

Revision 6603  Directory Listing
Modified Mon May 5 17:11:04 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: move volumes to start of list so it will be built before modules that need to use it (new for CMake 2.6

Revision 6602  Directory Listing
Modified Mon May 5 17:09:55 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: avoid warnings for new CMake 2.6

Revision 6599  Directory Listing
Modified Sun May 4 23:56:32 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: added test for tract/glyphs test, not yet working properly 

Revision 6598  Directory Listing
Modified Sun May 4 23:51:16 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: added link to BuildHelpAndAboutFrame 

Revision 6597  Directory Listing
Modified Sun May 4 16:55:57 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: changed/improved naming of nodes 

Revision 6596  Directory Listing
Modified Sat May 3 17:38:06 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: added glyph tube radius

Revision 6595  Directory Listing
Modified Sat May 3 16:54:45 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: added load directory of fiber tracks

Revision 6594  Directory Listing
Modified Sat May 3 04:19:54 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
BUG: fixed crash in vtkCollection, tensorNode was deleted twice. fixed crash of slicer, when dti was selected but tensor estimation not yet completed.

Revision 6593  Directory Listing
Modified Sat May 3 01:08:35 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
BUG: Implement SetModuleLogic(vtkSlicerLogic*) for loadable compatibility

Revision 6592  Directory Listing
Modified Sat May 3 00:14:07 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
BUG: name collision with ModuleDescription library, renaming locally defined class (ParserState) and functions (startElement, endElement, charDara)

Revision 6591  Directory Listing
Modified Sat May 3 00:10:08 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
ENH: getter method should return a const object, assignment operator should not return void

Revision 6590  Directory Listing
Modified Fri May 2 18:07:05 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: oops

Revision 6589  Directory Listing
Modified Thu May 1 21:19:47 2008 UTC (9 years, 4 months ago) by taox
Original Path: trunk
ENH: For Siemens data, we now use 0029,1010 field to extract information about b values and diffusion weighting gradient directions. The previous version uses 0019,10xx for the same purpose.

Revision 6588  Directory Listing
Modified Thu May 1 21:17:04 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: recreating the dashboard as Slicer3 to fix update pb

Revision 6587  Directory Listing
Modified Thu May 1 20:41:56 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: use CDASH

Revision 6586  Directory Listing
Modified Thu May 1 20:38:27 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: changed "negate button" to "invert button", changed StatusLabel color, changed checkButtons for visibility to pushbuttons with visibility icon.

Revision 6585  Directory Listing
Modified Thu May 1 18:59:02 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: fix the VOLUMES module, it was not a good citizen in Slicer3.cxx

Revision 6584  Directory Listing
Modified Thu May 1 17:01:39 2008 UTC (9 years, 4 months ago) by taox
Original Path: trunk
ENH: Handles series with multiple SeriesInstanceUIDs.

Revision 6583  Directory Listing
Modified Wed Apr 30 19:16:15 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: update for CMake 2.6

Revision 6582  Directory Listing
Modified Wed Apr 30 16:00:51 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: remove loadable modules until linux/mac bug is tracked down.

Revision 6581  Directory Listing
Modified Wed Apr 30 14:52:13 2008 UTC (9 years, 4 months ago) by aylward
Original Path: trunk
COMP: Fixed signed/unsigned comparison warnings


Revision 6580  Directory Listing
Modified Wed Apr 30 02:26:12 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
BUG: runtime crashes during use of the copy constructor reported on Mac and Linux (64), not sure if this will fix, but adding member initialization lists to the constructors, and using std::copy for the std::vector member

Revision 6579  Directory Listing
Modified Wed Apr 30 02:23:12 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
BUG typo in GENERATELM call did not add QdecModule LM libs to source

Revision 6578  Directory Listing
Modified Wed Apr 30 02:05:08 2008 UTC (9 years, 4 months ago) by blezek
Original Path: trunk
ENH: Accidentally checked in a bad edit, backing out changes

Revision 6577  Directory Listing
Modified Tue Apr 29 23:29:02 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: added and changed some BalloonHelpStrings

Revision 6576  Directory Listing
Modified Tue Apr 29 21:51:46 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: changed the glyph visibility. now it is changed directly in the vtkMRMLDiffusionTensorVolumeSliceDisplayNode

Revision 6575  Directory Listing
Modified Tue Apr 29 21:00:21 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: added scalar range to slice glyphs

Revision 6574  Directory Listing
Modified Tue Apr 29 15:14:40 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
ENH removing unused member variables

Revision 6573  Directory Listing
Modified Tue Apr 29 15:12:23 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
ENH obey the NoModules flag

Revision 6572  Directory Listing
Modified Tue Apr 29 13:33:58 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: Add find_package for generate clp for non-windows build

Revision 6571  Directory Listing
Modified Tue Apr 29 13:32:58 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: remove windows newlines from xml file

Revision 6570  Directory Listing
Modified Tue Apr 29 03:05:32 2008 UTC (9 years, 4 months ago) by tgl
Original Path: trunk
ENH results of merge with 6049:6469 from branches/tgl_loadable_modules.  Adds GenerateLM to create entry points for loadable module support via a text file and CMake macro. WFEngine, NeuroNav, Qdec and GAD are setup, other modules have text files, but the macro in the CMakeLists file is commented out.  Updated Slicer3_main,  the modules above will only be loaded if the DLL is found at run-time.  Lastly made a change to vtkSlicerViewerWidget, check for a NULL ModelHierarchyLogic pointer before continuing, which might not be the right thing to do.

Revision 6569  Directory Listing
Modified Tue Apr 29 03:04:33 2008 UTC (9 years, 4 months ago) by bess
Original Path: trunk
BUG: itkBSpline keeps a pointer to its parameters. Also fix test to actually test the result.

Revision 6568  Directory Listing
Modified Mon Apr 28 19:46:52 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: Second  step for renaming GradientEditor to DiffusionEditor

Revision 6567  Directory Listing
Modified Mon Apr 28 19:36:08 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: fix the erode and dilate effects

Revision 6566  Directory Listing
Modified Mon Apr 28 19:31:27 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: First step for renaming GradientEditor to DiffusionEditor

Revision 6565  Directory Listing
Modified Mon Apr 28 18:58:56 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: changed naming of resolution to spacing, added another gradients for testing

Revision 6564  Directory Listing
Modified Mon Apr 28 16:46:01 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: error catching template

Revision 6563  Directory Listing
Modified Mon Apr 28 16:35:59 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: added another test for loading gradients

Revision 6562  Directory Listing
Modified Mon Apr 28 12:45:55 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
STYLE: follow capitalization conventions and use ellipsis to indicate that a dialog will come up

Revision 6561  Directory Listing
Modified Mon Apr 28 12:18:33 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: cast 0 to vtkIndent to avoid build error on picky compilers

Revision 6560  Directory Listing
Modified Mon Apr 28 04:07:47 2008 UTC (9 years, 4 months ago) by blezek
Original Path: trunk
ENH: TimeSeriesDatabase now works with multiple files

Revision 6559  Directory Listing
Modified Mon Apr 28 04:07:35 2008 UTC (9 years, 4 months ago) by blezek
Original Path: trunk
BUG: added needed typedefs, and removed redundant asserts that had clearly never been compiled

Revision 6558  Directory Listing
Modified Mon Apr 28 00:57:07 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: added GetLogic method

Revision 6557  Directory Listing
Modified Sun Apr 27 21:01:14 2008 UTC (9 years, 4 months ago) by bess
Original Path: trunk
ENH: Initial wrapping of itkBSplineDeformableTransform

Revision 6556  Directory Listing
Modified Sun Apr 27 18:22:19 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: added testing environment in volumes modul and first DiffusionEditor ctest

Revision 6555  Directory Listing
Modified Sat Apr 26 21:33:20 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH:improved glyphs view

Revision 6554  Directory Listing
Modified Sat Apr 26 00:23:53 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: all nodes are deleted with the vtkSetMRMLNodeMacro. adjusting undo/redo for DTI.

Revision 6553  Directory Listing
Modified Fri Apr 25 23:41:19 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: add missing lib

Revision 6552  Directory Listing
Modified Fri Apr 25 22:27:26 2008 UTC (9 years, 4 months ago) by barre
Original Path: trunk
ENH: allow a module (Modules/GradientAnisotropicDiffusionFilter for now) to be built in a standalone fashion against eithera Slicer3 build or Slicer3 installed. Update the config files accordingly, add missing installation rules, etc. Also unscreamify and indent many CMakeLists.txt in the process.

Revision 6551  Directory Listing
Modified Fri Apr 25 18:44:25 2008 UTC (9 years, 4 months ago) by davisb
Original Path: trunk
ENH: add popup to EMSeg to warn against using images of differnt voxel types

Revision 6550  Directory Listing
Modified Fri Apr 25 18:18:24 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: try to avoid some computation by not sending as many modified events from the widget interaction

Revision 6548  Directory Listing
Modified Fri Apr 25 12:53:00 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: Use name that reflects the effect of the scale widget

Revision 6547  Directory Listing
Modified Fri Apr 25 02:38:26 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: fixed crash on exit

Revision 6546  Directory Listing
Modified Thu Apr 24 22:24:09 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: can't set input on the reader or it will crash

Revision 6545  Directory Listing
Modified Thu Apr 24 21:54:13 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
COMP: removing compiler warnings

Revision 6544  Directory Listing
Modified Thu Apr 24 21:53:26 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
COMP: reducing warnings

Revision 6543  Directory Listing
Modified Thu Apr 24 21:52:14 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: check for null pointer before strcmp

Revision 6542  Directory Listing
Modified Thu Apr 24 21:51:20 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: use quotes to handle path with spaces

Revision 6541  Directory Listing
Modified Thu Apr 24 21:50:55 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: remove use of uninitialized variable

Revision 6540  Directory Listing
Modified Thu Apr 24 21:50:29 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: add quotes in case of spaces in the path

Revision 6539  Directory Listing
Modified Thu Apr 24 21:15:52 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: support for nrrd format data

Revision 6538  Directory Listing
Modified Thu Apr 24 16:50:44 2008 UTC (9 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added upload to xnat

Revision 6537  Directory Listing
Modified Thu Apr 24 15:39:54 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix memory leak in broker test

Revision 6536  Directory Listing
Modified Thu Apr 24 14:27:34 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
ENH: improvements to the event broker, and conversion of many internal classes to use the event broker.  See http://wiki.na-mic.org/Wiki/index.php/Slicer3:EventBroker

Revision 6535  Directory Listing
Modified Thu Apr 24 13:00:38 2008 UTC (9 years, 4 months ago) by davisb
Original Path: trunk
ENH: unify EM algorithm output to std::cerr
BUG: try to fix vtkEMSegmentBuldAndRunNew... test for windows

Revision 6534  Directory Listing
Modified Wed Apr 23 23:55:46 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
BUG: fixed typo in naming of nodes

Revision 6533  Directory Listing
Modified Wed Apr 23 22:44:30 2008 UTC (9 years, 4 months ago) by kerstin
Original Path: trunk
ENH: name of widget changed

Revision 6532  Directory Listing
Modified Wed Apr 23 21:47:59 2008 UTC (9 years, 4 months ago) by aylward
Original Path: trunk
ENH: Required by CMake2.6(beta)


Revision 6531  Directory Listing
Modified Wed Apr 23 21:39:55 2008 UTC (9 years, 4 months ago) by aylward
Original Path: trunk
ENH: Required for CMake 2.6 (beta)


Revision 6530  Directory Listing
Modified Wed Apr 23 21:36:43 2008 UTC (9 years, 4 months ago) by alexy
Original Path: trunk
ENH: added colors to scalar, misc fixes

Revision 6529  Directory Listing
Modified Wed Apr 23 19:05:57 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: need to stop QueryAtlas from redoing win/level calcs on stats volumes

Revision 6528  Directory Listing
Modified Wed Apr 23 17:26:00 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: commit the delete of these files, moved to MRML

Revision 6527  Directory Listing
Modified Wed Apr 23 17:25:21 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: putting back in calc of auto levels, using new location

Revision 6526  Directory Listing
Modified Wed Apr 23 14:45:50 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
BUG: set interpolation and autolevel flags so that label map isn't interpolated and the auto win level calculcations are made

Revision 6525  Directory Listing
Modified Wed Apr 23 14:45:42 2008 UTC (9 years, 4 months ago) by naucoin
Original Path: trunk
ENH: move the calculation of the auto window and level to MRML where it will be done when image data is set or display nodes are set

Revision 6524  Directory Listing
Modified Wed Apr 23 13:07:11 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: explicitly cast to double to resolve overloaded floor function and perform calculation in double

Revision 6523  Directory Listing
Modified Wed Apr 23 12:32:47 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
STYLE: remove editor backup file

Revision 6522  Directory Listing
Modified Wed Apr 23 03:43:29 2008 UTC (9 years, 4 months ago) by blezek
Original Path: trunk
ENH: Adding TimeSeriesDatabase code

Revision 6521  Directory Listing
Modified Wed Apr 23 00:29:20 2008 UTC (9 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added basic framework for xnat upload. disabled in code until complete

Revision 6520  Directory Listing
Modified Wed Apr 23 00:28:28 2008 UTC (9 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added basic framework for xnat upload. disabled in code until complete

Revision 6519  Directory Listing
Modified Tue Apr 22 21:46:15 2008 UTC (9 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix up some code that generated warnings

Revision 6518  Directory Listing
Modified Tue Apr 22 19:55:05 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: back out removal of allocation of output data (keep fix for warning about unused variable)

Revision 6517  Directory Listing
Modified Tue Apr 22 19:52:03 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
BUG: destructor of volumesGUI was called twice

Revision 6516  Directory Listing
Modified Tue Apr 22 18:02:10 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: removed extra call to Enter() that caused recursion loop

Revision 6515  Directory Listing
Modified Tue Apr 22 17:00:53 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: improve glyphs view when DTI-selection changes 

Revision 6514  Directory Listing
Modified Tue Apr 22 02:29:58 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: tensor estimation is now disabled for DTIs

Revision 6513  Directory Listing
Modified Mon Apr 21 20:50:32 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: editor works now also with DTI

Revision 6512  Directory Listing
Modified Mon Apr 21 06:09:08 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
COMP: Warning - unused var


Revision 6511  Directory Listing
Modified Sun Apr 20 22:57:42 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: added glyph resolution to editor

Revision 6510  Directory Listing
Modified Sat Apr 19 14:13:50 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
ENH: Registration optimization still needs tweaking


Revision 6508  Directory Listing
Modified Fri Apr 18 17:22:23 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added Xnat Xcede catalog importing

Revision 6507  Directory Listing
Modified Fri Apr 18 17:21:28 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added Xnat Xcede catalog importing

Revision 6506  Directory Listing
Modified Fri Apr 18 17:20:46 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added Xnat Xcede catalog importing

Revision 6505  Directory Listing
Modified Fri Apr 18 17:20:13 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added Xnat Xcede catalog importing

Revision 6504  Directory Listing
Modified Fri Apr 18 17:19:25 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added Xnat Xcede catalog importing

Revision 6503  Directory Listing
Modified Fri Apr 18 14:04:57 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
COMP: Warnings on unused vars


Revision 6502  Directory Listing
Modified Fri Apr 18 13:57:08 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
COMP: Fixing signed/unsigned warnings


Revision 6501  Directory Listing
Modified Fri Apr 18 11:15:24 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
COMP: Removed unused variables - warnings


Revision 6500  Directory Listing
Modified Thu Apr 17 23:22:59 2008 UTC (9 years, 5 months ago) by alexy
Original Path: trunk
ENH: slice glyphs for transformed volume

Revision 6498  Directory Listing
Modified Thu Apr 17 21:24:53 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
COMP: avoid sending meaningless flag to visual studio

Revision 6497  Directory Listing
Modified Thu Apr 17 20:37:04 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
COMP: restore correct subdirectory for non-windows builds and remove hard coded paths for linux 64 (apparenly no longer needed with new cmake)

Revision 6496  Directory Listing
Modified Thu Apr 17 20:19:54 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: restore mistakenly removed variable

Revision 6495  Directory Listing
Modified Thu Apr 17 19:54:12 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix cut/paste typo

Revision 6494  Directory Listing
Modified Thu Apr 17 19:11:08 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: support the --release check for getbuilttest2

Revision 6493  Directory Listing
Modified Thu Apr 17 12:52:07 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
COMP: fix calls to match KWWidgets API

Revision 6492  Directory Listing
Modified Thu Apr 17 12:17:04 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: add SingleFile member to mrml scene and have it default to zero (compatible with old behavior)

Revision 6491  Directory Listing
Modified Wed Apr 16 20:46:31 2008 UTC (9 years, 5 months ago) by alexy
Original Path: trunk
ENH: fixed extra error msg

Revision 6490  Directory Listing
Modified Wed Apr 16 17:32:12 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
COMP: use widget name rather than pointer

Revision 6488  Directory Listing
Modified Wed Apr 16 12:10:02 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: use widget name rather than pointer to set parent

Revision 6487  Directory Listing
Modified Wed Apr 16 12:01:46 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: tweaked cache report

Revision 6485  Directory Listing
Modified Tue Apr 15 23:06:34 2008 UTC (9 years, 5 months ago) by barre
Original Path: trunk
ENH: slight API change in KWW

Revision 6484  Directory Listing
Modified Tue Apr 15 23:00:29 2008 UTC (9 years, 5 months ago) by barre
Original Path: trunk
ENH: slight API change in KWW

Revision 6482  Directory Listing
Modified Tue Apr 15 19:00:55 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: changes to remoteIO logic and gui that affect cancelling and cache overflow notification

Revision 6481  Directory Listing
Modified Tue Apr 15 18:03:20 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: catch bad x coordinate in slice window (-1) and clamp to zero with warning message

Revision 6480  Directory Listing
Modified Tue Apr 15 16:07:34 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: modifications to RemoteIO logic and gui

Revision 6478  Directory Listing
Modified Tue Apr 15 14:58:10 2008 UTC (9 years, 5 months ago) by davisb
Original Path: trunk
BUG: fix Mantis bug number 217:Problems changing atlas images after saving and reloading parameters

Revision 6476  Directory Listing
Modified Tue Apr 15 14:30:48 2008 UTC (9 years, 5 months ago) by davisb
Original Path: trunk
ENH: less confusion for user by adding a popup warning when sibling nodes do not sum to unity

Revision 6474  Directory Listing
Modified Mon Apr 14 21:43:36 2008 UTC (9 years, 5 months ago) by alexy
Original Path: trunk
ENH: delete sanpshots, scene tree observe node add/delete events

Revision 6473  Directory Listing
Modified Mon Apr 14 21:28:04 2008 UTC (9 years, 5 months ago) by alexy
Original Path: trunk
ENH: delete sanpshots, scene tree observe node add/delete events

Revision 6471  Directory Listing
Modified Mon Apr 14 16:56:34 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added GUI options for deleting scene snapshot

Revision 6470  Directory Listing
Modified Sun Apr 13 20:04:15 2008 UTC (9 years, 5 months ago) by davisb
Original Path: trunk
ENH: add extra info for EMSeg ROI warning

Revision 6468  Directory Listing
Modified Sat Apr 12 18:09:29 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
COMP: fix destination path for packaging

Revision 6467  Directory Listing
Modified Sat Apr 12 01:13:58 2008 UTC (9 years, 5 months ago) by hayes
Original Path: trunk
BUG: Reverting to earlier version to work with old CPack

Revision 6466  Directory Listing
Modified Fri Apr 11 21:49:51 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
ENH: add ability to center or manually change origin and spacing for a volume

Revision 6463  Directory Listing
Modified Fri Apr 11 20:30:25 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
ENH: infrastructure for editing header values

Revision 6462  Directory Listing
Modified Fri Apr 11 19:30:28 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
COMP: remove unneeded dependency on sandbox libraries

Revision 6452  Directory Listing
Modified Fri Apr 11 14:25:27 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
BUG: init RunFrame as it was causing a crash in the destructor

Revision 6450  Directory Listing
Modified Fri Apr 11 14:07:04 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
COMP: don't build NAMIC Sandbox - it's time consuming and not currently used

Revision 6447  Directory Listing
Modified Fri Apr 11 13:31:51 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
COMP: disable this test for now since it hangs on windows

Revision 6446  Directory Listing
Modified Fri Apr 11 12:31:00 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
ENH: disable nonfunctional interface elements

Revision 6445  Directory Listing
Modified Fri Apr 11 12:27:31 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
ENH: implement basic erode functionality

Revision 6444  Directory Listing
Modified Fri Apr 11 12:19:59 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
COMP: add target for compatibility with newer cmake

Revision 6443  Directory Listing
Modified Thu Apr 10 22:51:45 2008 UTC (9 years, 5 months ago) by hayes
Original Path: trunk
ENH: Settings for MSVS 9

Revision 6442  Directory Listing
Modified Thu Apr 10 22:51:42 2008 UTC (9 years, 5 months ago) by hayes
Original Path: trunk
ENH: Settings for MSVS 9

Revision 6441  Directory Listing
Modified Thu Apr 10 22:43:22 2008 UTC (9 years, 5 months ago) by hayes
Original Path: trunk
ENH: Settings for MSVS 9

Revision 6440  Directory Listing
Modified Thu Apr 10 22:43:16 2008 UTC (9 years, 5 months ago) by hayes
Original Path: trunk
ENH: Settings for MSVS 9

Revision 6439  Directory Listing
Modified Thu Apr 10 20:36:49 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: commented out explicit SetHeight on TreeWidget and changed Frame name

Revision 6438  Directory Listing
Modified Thu Apr 10 18:47:47 2008 UTC (9 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: 170, show error dialog when volume/model filename in the scene is wrong

Revision 6437  Directory Listing
Modified Thu Apr 10 17:17:42 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
ENH: add framework for erode and dilate

Revision 6436  Directory Listing
Modified Thu Apr 10 16:46:05 2008 UTC (9 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: 187, set default file extention to .vtk

Revision 6435  Directory Listing
Modified Thu Apr 10 11:03:13 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
COMP: Fixed unused variables warning


Revision 6434  Directory Listing
Modified Wed Apr 9 09:40:31 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
COMP: fix warnings of unused vars, signed/unsigned comparisons, and bool/int conversions


Revision 6433  Directory Listing
Modified Tue Apr 8 18:46:50 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: moving testing to own class

Revision 6432  Directory Listing
Modified Tue Apr 8 18:30:53 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: workaround a problem with fiducial test that would cause restart on linux with nvidia drivers

Revision 6431  Directory Listing
Modified Tue Apr 8 13:02:48 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
COMP: Unused variable warnings


Revision 6428  Directory Listing
Modified Mon Apr 7 23:22:05 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: Tractography works now when fibernode has been deleted in the data module

Revision 6427  Directory Listing
Modified Mon Apr 7 21:05:00 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
BUG: index has to be an integer

Revision 6426  Directory Listing
Modified Mon Apr 7 02:53:20 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: added glyphs/tracts view in editor

Revision 6425  Directory Listing
Modified Sun Apr 6 21:38:20 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
ENH: RegisterImages now access --minimizeMemory command-line option to solve large registration problems on modest PCs


Revision 6424  Directory Listing
Modified Sun Apr 6 18:00:40 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removing old icon classes and resource now consolidated into FoundationIcons

Revision 6423  Directory Listing
Modified Sun Apr 6 17:56:37 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removing the compilation of old icon classes now consolidated into FoundationIcons

Revision 6422  Directory Listing
Modified Sun Apr 6 17:43:47 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: some logic fixes to DataIOManagerGUI

Revision 6421  Directory Listing
Modified Sun Apr 6 17:42:48 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: using new icons, and some modification and other fixes to DataIOManagerGUI

Revision 6420  Directory Listing
Modified Sun Apr 6 17:42:31 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: using new icons, and some modification and other fixes to DataIOManagerGUI

Revision 6419  Directory Listing
Modified Sun Apr 6 17:41:52 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: using new icons, and some modification and other fixes to DataIOManagerGUI

Revision 6418  Directory Listing
Modified Sun Apr 6 17:39:41 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: using new icon

Revision 6417  Directory Listing
Modified Sun Apr 6 17:38:53 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: extending resource for a aset of basic icons owned by AppGUI that any module can easily access

Revision 6416  Directory Listing
Modified Sun Apr 6 17:37:42 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding image data for a set of basic icons owned by AppGUI that any module can easily access

Revision 6415  Directory Listing
Modified Sun Apr 6 17:36:11 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated image data

Revision 6414  Directory Listing
Modified Sun Apr 6 16:56:19 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
STYLE: small GUI changes

Revision 6413  Directory Listing
Modified Sun Apr 6 14:51:19 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
COMP: Fixed warnings and printf format error


Revision 6412  Directory Listing
Modified Sun Apr 6 14:45:42 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
COMP: Removed warnings


Revision 6411  Directory Listing
Modified Sun Apr 6 14:11:18 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
COMP: Removed unused var warning


Revision 6409  Directory Listing
Modified Sat Apr 5 20:26:16 2008 UTC (9 years, 5 months ago) by aylward
Original Path: trunk
ENH: Tweaks


Revision 6408  Directory Listing
Modified Sat Apr 5 14:37:57 2008 UTC (9 years, 5 months ago) by alexy
Original Path: trunk
ENH: slice glyphs scene save/load

Revision 6404  Directory Listing
Modified Fri Apr 4 19:52:38 2008 UTC (9 years, 5 months ago) by taox
Original Path: trunk
ENH: Added a new function for parsing information from 0029,1010 tag. Added some more code for debugging.

Revision 6401  Directory Listing
Modified Fri Apr 4 18:37:03 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: include all modules in packaging list (some had been forgotten)

Revision 6400  Directory Listing
Modified Fri Apr 4 18:36:33 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
ENH: remove maximum (not needed)

Revision 6399  Directory Listing
Modified Fri Apr 4 16:31:02 2008 UTC (9 years, 5 months ago) by lorensen
Original Path: trunk
BUG: bogus use of typename.

Revision 6397  Directory Listing
Modified Fri Apr 4 14:49:48 2008 UTC (9 years, 5 months ago) by davisb
Original Path: trunk
BUG: Fix problems with adding and removing channels in EMSegmenter, specifically bugs 179 and 181

Revision 6396  Directory Listing
Modified Thu Apr 3 20:49:03 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added XNATHandler and permission prompter. not tested yet -- don't use for remote IO yet.

Revision 6395  Directory Listing
Modified Thu Apr 3 20:48:02 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: working on XNATHandler and permission prompter. not tested yet, don't use.

Revision 6394  Directory Listing
Modified Thu Apr 3 20:46:18 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: working on XNAT handler. not tested -- don't use

Revision 6393  Directory Listing
Modified Thu Apr 3 20:45:42 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: working on XNAT handler. not tested -- don't use

Revision 6392  Directory Listing
Modified Thu Apr 3 20:43:17 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: made initial cache directory default to Temporary directory, which includes user in path

Revision 6391  Directory Listing
Modified Thu Apr 3 20:42:22 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
BUG: test for null strings

Revision 6390  Directory Listing
Modified Thu Apr 3 20:23:36 2008 UTC (9 years, 5 months ago) by alexy
Original Path: trunk
ENH: added glyph display nodes to CLI

Revision 6388  Directory Listing
Modified Thu Apr 3 19:50:32 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: improvement for loading .txt files with gradients

Revision 6387  Directory Listing
Modified Thu Apr 3 18:27:07 2008 UTC (9 years, 5 months ago) by millerjv
Original Path: trunk
BUG: compiler error on some systems

Revision 6385  Directory Listing
Modified Thu Apr 3 15:43:09 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
BUG: reduce the width of the selector widget so can see the restore button

Revision 6384  Directory Listing
Modified Thu Apr 3 13:20:01 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
ENH: add --nobuild option to genlib (thanks to Mike Halle)

Revision 6383  Directory Listing
Modified Thu Apr 3 12:35:41 2008 UTC (9 years, 5 months ago) by davisb
Original Path: trunk
BUG: initialize recently added member variabiles

Revision 6382  Directory Listing
Modified Wed Apr 2 21:38:02 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
BUG: trying out using the added autoLevel flag on the volumes logic, auto window/level is still not working right, though

Revision 6381  Directory Listing
Modified Wed Apr 2 21:37:01 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
ENH: use the new storage node flags, deal with multiple storage nodes that may already exist on the nodes

Revision 6380  Directory Listing
Modified Wed Apr 2 21:36:56 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
ENH: added new read/write flags, Ready changed to Idle when the node isn't read/writing anything, and to TransferDone when it's ready to read from disk

Revision 6378  Directory Listing
Modified Wed Apr 2 21:35:27 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: cahnged a warning to a debug

Revision 6377  Directory Listing
Modified Wed Apr 2 20:35:08 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
BUG: needed to break rather than continue

Revision 6375  Directory Listing
Modified Wed Apr 2 20:00:41 2008 UTC (9 years, 5 months ago) by millerjv
Original Path: trunk
ENH: make the module discovery process quiet by default.  Can be turned on using the --verbose_module_discovery option

Revision 6371  Directory Listing
Modified Wed Apr 2 17:38:00 2008 UTC (9 years, 5 months ago) by alexy
Original Path: trunk
ENH: clean up observers and memory leaks in dti glyphs display

Revision 6370  Directory Listing
Modified Wed Apr 2 17:15:29 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix lingering reference to argv

Revision 6369  Directory Listing
Modified Wed Apr 2 17:11:30 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
COMP: trying to clear a warning

Revision 6357  Directory Listing
Modified Tue Apr 1 22:47:28 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
COMP: copy/paste error fix

Revision 6353  Directory Listing
Modified Tue Apr 1 20:32:21 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: some code improvement

Revision 6350  Directory Listing
Modified Tue Apr 1 19:41:37 2008 UTC (9 years, 5 months ago) by alexy
Original Path: trunk
ENH: added DTI glyphs on 2D slices

Revision 6348  Directory Listing
Modified Tue Apr 1 19:25:23 2008 UTC (9 years, 5 months ago) by millerjv
Original Path: trunk
ENH: merge from TransformIO branch from revision 4897 through revision 6346

Revision 6345  Directory Listing
Modified Tue Apr 1 17:33:27 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
ENH: add .xcat files to the default scene file listing in the load scene dialog browser

Revision 6344  Directory Listing
Modified Tue Apr 1 17:00:32 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: remote data handling GUI updates

Revision 6343  Directory Listing
Modified Tue Apr 1 16:59:42 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: remote data handling updates

Revision 6342  Directory Listing
Modified Tue Apr 1 16:58:36 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: drafts of classes for downloading files from an xnat database -- not ready to use

Revision 6340  Directory Listing
Modified Tue Apr 1 03:33:07 2008 UTC (9 years, 5 months ago) by taox
Original Path: trunk
ENH: Figure out Mosaic related information for Siemens diffusion weighted images in mosaic form from the private tag 0029,1010. Potentially, diffusion weighting gradient direction could also be parsed from this tag. Still fragile. 

Revision 6338  Directory Listing
Modified Mon Mar 31 21:28:08 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added lines for building username/password prompting popup dialogs. These build but are not tested/used yet.

Revision 6337  Directory Listing
Modified Mon Mar 31 21:27:02 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: draft GUIs for username/password prompting -- not yet ready to use

Revision 6336  Directory Listing
Modified Mon Mar 31 21:23:13 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: determinant now also checked in update method

Revision 6332  Directory Listing
Modified Mon Mar 31 19:34:25 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: add determinant check

Revision 6329  Directory Listing
Modified Mon Mar 31 18:52:59 2008 UTC (9 years, 5 months ago) by davisb
Original Path: trunk
ENH: enable multithreading (for EM segmentation) by default

Revision 6328  Directory Listing
Modified Mon Mar 31 13:21:09 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added members for saving username, password, host, etc.

Revision 6326  Directory Listing
Modified Mon Mar 31 01:59:42 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
STYLE: code cleaning

Revision 6324  Directory Listing
Modified Mon Mar 31 01:11:27 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: documentation

Revision 6322  Directory Listing
Modified Sat Mar 29 17:27:01 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
COMP: add typename for windows compilation

Revision 6321  Directory Listing
Modified Fri Mar 28 21:03:37 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
ENH: clean up unused classes

Revision 6320  Directory Listing
Modified Fri Mar 28 20:59:03 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
ENH: new bspline code from Utah

Revision 6319  Directory Listing
Modified Fri Mar 28 19:33:03 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: set the output label type to be the same as the input label (not same as input background)

Revision 6318  Directory Listing
Modified Fri Mar 28 19:31:51 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: don't run the filter if the data type is wrong

Revision 6317  Directory Listing
Modified Fri Mar 28 16:21:42 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
BUG: use the new overlay storage nodes

Revision 6312  Directory Listing
Modified Thu Mar 27 19:17:50 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
ENH: Added simplified method to volumes logic to add xcat sample file volumes, and call it from the tcl parser. BUG: fixed setting local file name and checking for existence and label map flag

Revision 6311  Directory Listing
Modified Thu Mar 27 19:17:19 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
ENH: added simplified add method, that works with remote file handling. BUG: added error checking. TODO: fix window level setting in new add scalar archetype volume method.

Revision 6310  Directory Listing
Modified Thu Mar 27 17:21:07 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: finished redo

Revision 6305  Directory Listing
Modified Wed Mar 26 21:06:14 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updating SceneSnapshot GUI as per Ron's request (draft)

Revision 6304  Directory Listing
Modified Wed Mar 26 20:59:23 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new image resources for SceneSnapshot widget and PopupHelp 

Revision 6303  Directory Listing
Modified Wed Mar 26 20:58:16 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new image data for SceneSnapshot GUI and popup help

Revision 6299  Directory Listing
Modified Wed Mar 26 18:46:33 2008 UTC (9 years, 5 months ago) by naucoin
Original Path: trunk
ENH: up the remote dl cache limit

Revision 6282  Directory Listing
Modified Mon Mar 24 20:26:22 2008 UTC (9 years, 5 months ago) by pieper
Original Path: trunk
BUG: update annotation after increment/decrement operations on slice

Revision 6281  Directory Listing
Modified Mon Mar 24 20:25:04 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added ability to put GUI panel on left or right (user request)

Revision 6280  Directory Listing
Modified Mon Mar 24 18:30:04 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added icon for CompareView, image data, resource, icon, and added into chooselayout menubutton

Revision 6277  Directory Listing
Modified Mon Mar 24 17:59:36 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added comparison view icon under layout menubutton

Revision 6275  Directory Listing
Modified Mon Mar 24 17:19:41 2008 UTC (9 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: comparison viewer icon image data

Revision 6270  Directory Listing
Modified Sun Mar 23 22:51:12 2008 UTC (9 years, 5 months ago) by kerstin
Original Path: trunk
ENH: fixed leaks, implemented restore

Revision 6265  Directory Listing
Modified Fri Mar 21 18:50:50 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: reset point widget exists flag, so get more than one point widget per list

Revision 6264  Directory Listing
Modified Fri Mar 21 18:44:34 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: making sure don't go past end of selectedIndices array

Revision 6262  Directory Listing
Modified Fri Mar 21 14:51:08 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
COMP: removing warning about type mismatch

Revision 6261  Directory Listing
Modified Fri Mar 21 14:44:28 2008 UTC (9 years, 6 months ago) by alexy
Original Path: trunk
ENH: added GUI for tensor glyph slices

Revision 6248  Directory Listing
Modified Wed Mar 19 00:03:30 2008 UTC (9 years, 6 months ago) by kerstin
Original Path: trunk
ENH: first steps to change redo/undo/restore

Revision 6247  Directory Listing
Modified Tue Mar 18 22:49:06 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: local files have to have the uri reset as well

Revision 6246  Directory Listing
Modified Tue Mar 18 22:38:43 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: use the Models logic to automatically download the parts that can be downloaded (FS models and overlays). TBD: volumes logic auto downloads

Revision 6245  Directory Listing
Modified Tue Mar 18 21:32:03 2008 UTC (9 years, 6 months ago) by alexy
Original Path: trunk
ENH: fixed DTI glyphs display on 3d slices

Revision 6244  Directory Listing
Modified Tue Mar 18 21:25:49 2008 UTC (9 years, 6 months ago) by alexy
Original Path: trunk
ENH: fixed DTI glyphs display on 3d slices

Revision 6241  Directory Listing
Modified Tue Mar 18 21:13:34 2008 UTC (9 years, 6 months ago) by alexy
Original Path: trunk
ENH: DTI glyphs display on 3d slices

Revision 6240  Directory Listing
Modified Tue Mar 18 20:39:29 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: check for and use multiple storage nodes, using the new scheduled state

Revision 6239  Directory Listing
Modified Tue Mar 18 20:38:38 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: use new freesurfer model overlay storage nodes. Check for remote references

Revision 6238  Directory Listing
Modified Tue Mar 18 20:36:22 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: need to check multiple storage nodes, check and use the scheduled state

Revision 6237  Directory Listing
Modified Tue Mar 18 20:35:26 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: register the freesurfer model overlay storage nodes so that they can be read from mrml files

Revision 6236  Directory Listing
Modified Tue Mar 18 20:35:01 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: remove references to the overlays, use the freesurfer model overlay storage node now

Revision 6235  Directory Listing
Modified Tue Mar 18 20:33:20 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
STYLE: cleared up error text

Revision 6234  Directory Listing
Modified Tue Mar 18 20:32:40 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: add freesurfer overlay storage nodes, using multiple storage node capabilties

Revision 6233  Directory Listing
Modified Tue Mar 18 20:31:24 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: add a scheduled state, so that when the data io manager sets up a transfer task, it lets the storage node know that it's scheduled. Then, the storage nodes need to check if they're not ready, rather than pending.

Revision 6232  Directory Listing
Modified Tue Mar 18 19:10:25 2008 UTC (9 years, 6 months ago) by barre
Original Path: trunk
ENH: try to build on MacOSX 10.5

Revision 6231  Directory Listing
Modified Tue Mar 18 16:42:26 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: add a more reasonable name to the node since it gets displayed in the status bar during progress updates

Revision 6229  Directory Listing
Modified Tue Mar 18 01:09:14 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
COMP: use less-generic enum names to avoid compile errors on solaris

Revision 6228  Directory Listing
Modified Mon Mar 17 22:49:17 2008 UTC (9 years, 6 months ago) by alexy
Original Path: trunk
ENH: added check to prevent crach

Revision 6227  Directory Listing
Modified Mon Mar 17 22:02:17 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed transfer running timer for asynchronous xfers. synchronous xfers just gets an hourglass...

Revision 6225  Directory Listing
Modified Mon Mar 17 16:55:20 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: add a type field to the vtkSlicerTask so that Networking and Processing tasks can be done separately.  Currently only one of each type is allowed to run at a time.  Running more than one networking thread at a time runs, but there is a crash after completion that may be due to a thread safety issue with the way we are using curl

Revision 6224  Directory Listing
Modified Mon Mar 17 12:56:51 2008 UTC (9 years, 6 months ago) by hjohnson
Original Path: trunk
COMP:  The NO_MODULE flag to FIND_PACKAGE was introduced after cmake version 2.4

Revision 6223  Directory Listing
Modified Mon Mar 17 01:58:02 2008 UTC (9 years, 6 months ago) by kerstin
Original Path: trunk
ENH: Display selected DTI implemented

Revision 6222  Directory Listing
Modified Sun Mar 16 23:46:00 2008 UTC (9 years, 6 months ago) by kerstin
Original Path: trunk
ENH: GUI changes, added new selector, button

Revision 6221  Directory Listing
Modified Sun Mar 16 20:19:16 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: provide feedback while edit box icons are being created

Revision 6220  Directory Listing
Modified Sun Mar 16 19:57:08 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
BUG: fix warnings associated with incorrect observer deletion

Revision 6219  Directory Listing
Modified Sun Mar 16 18:56:02 2008 UTC (9 years, 6 months ago) by hjohnson
Original Path: trunk
COMP:  Removed compiler warnings by: 1) Matching types, 2) instantiate variable inside of ifdef that needs it, 3) removed unused variable.

Revision 6218  Directory Listing
Modified Sun Mar 16 18:54:51 2008 UTC (9 years, 6 months ago) by hjohnson
Original Path: trunk
ENH:  There is no cmake module for TCLAP or ModuleDescriptionParser, so be explicit in not looking for the module.

Revision 6217  Directory Listing
Modified Sun Mar 16 18:52:55 2008 UTC (9 years, 6 months ago) by hjohnson
Original Path: trunk
BUG:  The variables names for filling in the installed version of the configuration were not filled in correctly.

Revision 6215  Directory Listing
Modified Fri Mar 14 20:01:47 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: support threaded background upload

Revision 6214  Directory Listing
Modified Fri Mar 14 20:00:39 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: gui behavior fixes

Revision 6213  Directory Listing
Modified Fri Mar 14 19:58:59 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: quote the filenames in case they have spaces

Revision 6211  Directory Listing
Modified Fri Mar 14 19:07:05 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: making fixes to RemoteIO and Cache manager gui 

Revision 6210  Directory Listing
Modified Fri Mar 14 18:21:22 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
BUG: include .g. and .stl as remote downloadable types

Revision 6209  Directory Listing
Modified Fri Mar 14 17:50:16 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed reporting of transfer status for synchronous data transfers

Revision 6208  Directory Listing
Modified Fri Mar 14 17:43:23 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: found and fixed debugleaks

Revision 6207  Directory Listing
Modified Fri Mar 14 17:09:50 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed bug in DataTransfer method in .h file, logic bug in DataIOManager for asynchronous transfrs, made various remoteIO GUI changes

Revision 6206  Directory Listing
Modified Fri Mar 14 15:42:14 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: write remote model files

Revision 6205  Directory Listing
Modified Fri Mar 14 15:35:41 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: deal with remote model files

Revision 6204  Directory Listing
Modified Fri Mar 14 14:51:15 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
BUG: define MATPLOTLIB_TEST_FILE for all OS options

Revision 6203  Directory Listing
Modified Fri Mar 14 12:41:28 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: a side effect of making the colour nodes storable is that the storable node is a subclass of the transformable node, which turns off hide from editors by default. Turn it on here so colour nodes don't appear in the node tree

Revision 6202  Directory Listing
Modified Fri Mar 14 01:19:22 2008 UTC (9 years, 6 months ago) by alexy
Original Path: trunk
ENH: turn off backface culling for fibers

Revision 6201  Directory Listing
Modified Thu Mar 13 23:15:46 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: support remote uri's in xcat files

Revision 6200  Directory Listing
Modified Thu Mar 13 22:33:22 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: enabling remote data writing

Revision 6199  Directory Listing
Modified Thu Mar 13 22:24:16 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: implementing remote writing of files

Revision 6198  Directory Listing
Modified Thu Mar 13 22:22:44 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: enable multiple storage nodes, following the template of multiple display nodes. Needed to deal more gracefully with model overlay files which should have their own separate storage nodes. The change is pervasive due to protecting SetStorageNodeID, use SetAndObserveStorageNodeID

Revision 6197  Directory Listing
Modified Thu Mar 13 21:15:06 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: working on DataTransferWidget -- still leaving stubbed out in code, but checking in changes

Revision 6195  Directory Listing
Modified Thu Mar 13 20:04:33 2008 UTC (9 years, 6 months ago) by kerstin
Original Path: trunk
ENH: deleted not existing subdir reference

Revision 6194  Directory Listing
Modified Thu Mar 13 18:43:15 2008 UTC (9 years, 6 months ago) by taox
Original Path: trunk
ENH: Use 0029,1010 to figure out the slice order in a Siemens Mosaic format. Use 0019,100a to figure out number of slices in a mosaic.

Revision 6188  Directory Listing
Modified Thu Mar 13 13:47:23 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
BUG: put all command line option actions (like running a script or loading a scene) into and after idle wrapper so they execute after the GUI is fully instantiated.  This may workaround X11 bugs on 64 bit linux.

Revision 6187  Directory Listing
Modified Wed Mar 12 22:46:06 2008 UTC (9 years, 6 months ago) by kerstin
Original Path: trunk
ENH: small improvements in tensor estimation

Revision 6184  Directory Listing
Modified Wed Mar 12 21:26:07 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: working on fixing the DataTransferWidget...still stubbed out

Revision 6183  Directory Listing
Modified Wed Mar 12 21:11:36 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: added the SRB remote file handler

Revision 6182  Directory Listing
Modified Wed Mar 12 21:10:48 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: added a simple SRB handler, uri must start with srb://

Revision 6181  Directory Listing
Modified Wed Mar 12 20:52:11 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: repacking cache and remoteio gui to fix its display, modifying timer kill code in data transfer widget

Revision 6180  Directory Listing
Modified Wed Mar 12 20:51:00 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Added methods to cache manager to mark nodes if their data is deleted from cache while they're still in the scene

Revision 6178  Directory Listing
Modified Wed Mar 12 17:56:52 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: enable using the curl libraries for remote data handling, and the remote io lib

Revision 6177  Directory Listing
Modified Wed Mar 12 17:56:47 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: added error checking to avoid null pointers

Revision 6176  Directory Listing
Modified Wed Mar 12 17:33:09 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added refresh button to remoteio gui

Revision 6175  Directory Listing
Modified Wed Mar 12 17:28:55 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: image data for remoteIO gui

Revision 6174  Directory Listing
Modified Wed Mar 12 17:23:20 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: added error checking

Revision 6173  Directory Listing
Modified Wed Mar 12 17:22:58 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: added error checking

Revision 6172  Directory Listing
Modified Wed Mar 12 16:44:39 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding events and callback methods to integrate cache & remoteIO gui

Revision 6170  Directory Listing
Modified Wed Mar 12 14:58:18 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: fixing grid call syntax

Revision 6169  Directory Listing
Modified Tue Mar 11 23:29:41 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: use the new storable node

Revision 6168  Directory Listing
Modified Tue Mar 11 23:29:37 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: removing the references to the storage node from the colour nodes, adding a new node, 
vtkMRMLStorableNode, that deals with the storage node references, and is in the inheritance 
hierarchy between displayable and transformable nodes (took out references to the storage node 
in vtkMRMLDisplayableNode). vtkMRMLColorNode now inherits from the storable node. Use the new 
storable node to cast in the data io manager. Register the color table node in the scene 
so that it can be used properly in mrml files.


Revision 6167  Directory Listing
Modified Tue Mar 11 23:24:24 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
STYLE: took out commented out code

Revision 6166  Directory Listing
Modified Tue Mar 11 23:03:32 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
STYLE: adjusting print outs

Revision 6165  Directory Listing
Modified Tue Mar 11 22:47:41 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: check for supported file extensions

Revision 6164  Directory Listing
Modified Tue Mar 11 22:46:26 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: check for supported file types, added error checking.

Revision 6163  Directory Listing
Modified Tue Mar 11 22:44:39 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: check for supported file types, for now always return 1

Revision 6162  Directory Listing
Modified Tue Mar 11 22:30:27 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: commenting out ref to http handler

Revision 6161  Directory Listing
Modified Tue Mar 11 22:25:48 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: wait until GUI has loaded before connecting to scene (may fix crash on 64 bit linux)

Revision 6160  Directory Listing
Modified Tue Mar 11 22:22:36 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: supported file types

Revision 6159  Directory Listing
Modified Tue Mar 11 18:22:52 2008 UTC (9 years, 6 months ago) by taox
Original Path: trunk
ENH: Implemented the new option to load a single file from a series.

Revision 6158  Directory Listing
Modified Tue Mar 11 13:20:25 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: put in hooks for debugging remoteIO gui

Revision 6157  Directory Listing
Modified Mon Mar 10 22:10:45 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added 'cancel all transfers' and 'clear cache' buttons in GUI, hooked up GUI callbacks to modify ApplicationInterfaceSettings, RemoteIO and CacheManager configuration.

Revision 6156  Directory Listing
Modified Mon Mar 10 20:37:25 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Building out GUI to respond to events from cachemanager and dataIOmanager

Revision 6155  Directory Listing
Modified Mon Mar 10 20:36:00 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: making some status flags consistent

Revision 6154  Directory Listing
Modified Mon Mar 10 20:35:03 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: made DataIOManager observe all of its data transfers for Modified Events, and invoke a DataTransferUpdateEvent that GUI can listen for. Added a Set method in vtkDataTransfer that doesn't invoke a modified event

Revision 6153  Directory Listing
Modified Mon Mar 10 18:46:28 2008 UTC (9 years, 6 months ago) by kerstin
Original Path: trunk
ENH: some documentation added

Revision 6152  Directory Listing
Modified Mon Mar 10 17:05:05 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: change controller widget so it observes the corresponding slice logic and is able to respond to changes (like changes to the image data in a volume node)

Revision 6151  Directory Listing
Modified Mon Mar 10 17:03:22 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: make changes that allow asynchronous remote IO

Revision 6150  Directory Listing
Modified Mon Mar 10 16:11:32 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
BUG: initialize MRML scene in ApplicationGUI constructor

Revision 6149  Directory Listing
Modified Mon Mar 10 16:02:03 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
BUG: fix leak of URI handler

Revision 6147  Directory Listing
Modified Sun Mar 9 22:39:00 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: building out the remoteIO gui components. coded, not yet instanced or tested

Revision 6146  Directory Listing
Modified Sun Mar 9 22:36:27 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added new method for adding data transfer which sends ptr to a new data transfer

Revision 6145  Directory Listing
Modified Sun Mar 9 22:34:37 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: modified events and status

Revision 6144  Directory Listing
Modified Sun Mar 9 22:31:44 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new image data for remoteio

Revision 6143  Directory Listing
Modified Sun Mar 9 17:54:24 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
BUG: avoid having the cache default to an unwritable place

Revision 6142  Directory Listing
Modified Sun Mar 9 03:41:16 2008 UTC (9 years, 6 months ago) by kerstin
Original Path: trunk
STYLE: vtkErrorMacro -> vtkDebugMacro

Revision 6141  Directory Listing
Modified Sun Mar 9 03:09:02 2008 UTC (9 years, 6 months ago) by kerstin
Original Path: trunk
ENH: tensor only estimated when gradients or measurement frame changed 

Revision 6140  Directory Listing
Modified Sat Mar 8 13:40:20 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Fixed bugs in cachemanager logic methods

Revision 6139  Directory Listing
Modified Sat Mar 8 05:22:59 2008 UTC (9 years, 6 months ago) by blezek
Original Path: trunk
BUG: didn't create directory if one does not exist

Revision 6137  Directory Listing
Modified Fri Mar 7 21:05:16 2008 UTC (9 years, 6 months ago) by kerstin
Original Path: trunk
ENH: added process to the main window by using existing guis. tracts move now.

Revision 6136  Directory Listing
Modified Fri Mar 7 21:03:32 2008 UTC (9 years, 6 months ago) by kerstin
Original Path: trunk
ENH: added set methods

Revision 6132  Directory Listing
Modified Fri Mar 7 18:33:42 2008 UTC (9 years, 6 months ago) by hayes
Original Path: trunk
BUG: included line for Slicer3InstallConfig.cmake.in

Revision 6130  Directory Listing
Modified Fri Mar 7 16:06:46 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Fixed a bug in AddCachePathToFilename method in CacheManager

Revision 6128  Directory Listing
Modified Fri Mar 7 14:21:36 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: make sure the temp dir is set on enter, so other code can invoke the module without using the Apply callback

Revision 6126  Directory Listing
Modified Fri Mar 7 13:20:43 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
BUG: if the file is found in the cache, then tell the storage node it is ready to be read

Revision 6125  Directory Listing
Modified Fri Mar 7 12:26:28 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
COMP: fix double declaration of variable

Revision 6124  Directory Listing
Modified Thu Mar 6 22:59:30 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: put in default RemoteCache dir under the default Tmp dir, in case no registry setting is available

Revision 6123  Directory Listing
Modified Thu Mar 6 22:50:46 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: deal with remote mrml files

Revision 6122  Directory Listing
Modified Thu Mar 6 22:30:33 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: getting state out of the GUI and setting up to track state in MRML vtkDataTransfer instead

Revision 6121  Directory Listing
Modified Thu Mar 6 22:30:30 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: supported file type checking

Revision 6120  Directory Listing
Modified Thu Mar 6 22:28:44 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed problem with kwsys/SystemTools not recognizing cachdir with trailing forwardslash

Revision 6119  Directory Listing
Modified Thu Mar 6 20:58:27 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Propagating all RemoteIOSettings from Registry into CacheManager and DataIOManager

Revision 6118  Directory Listing
Modified Thu Mar 6 20:56:23 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Propagating all RemoteIOSettings from Registry into CacheManager and DataIOManager

Revision 6117  Directory Listing
Modified Thu Mar 6 20:37:21 2008 UTC (9 years, 6 months ago) by kerstin
Original Path: trunk
ENH: created new method CreateTracts, fiducial seeding works!

Revision 6115  Directory Listing
Modified Thu Mar 6 19:26:55 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: error checking, supported file type check

Revision 6114  Directory Listing
Modified Thu Mar 6 19:15:38 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
BUG: initialize applicationgui pointer

Revision 6113  Directory Listing
Modified Thu Mar 6 19:11:17 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: changing read/write state from Done to Ready. Updates to StageReadData to bring it in line with other changes. Added SupportedFileType as a utility call

Revision 6112  Directory Listing
Modified Thu Mar 6 18:52:10 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: Set the storage node's state once finished the synchronous transfer. Added some debugging print outs and error messages

Revision 6111  Directory Listing
Modified Thu Mar 6 18:49:18 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed crashing bug in slicer startup...

Revision 6110  Directory Listing
Modified Thu Mar 6 18:43:22 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added some error macros

Revision 6109  Directory Listing
Modified Thu Mar 6 18:42:03 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Propagating registry setting for RemoteCacheDirectory to CacheManager

Revision 6108  Directory Listing
Modified Thu Mar 6 18:39:38 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added CancelRequested flag to a DataTransfer object

Revision 6107  Directory Listing
Modified Thu Mar 6 18:38:40 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated image data for DataTransferWidget

Revision 6106  Directory Listing
Modified Thu Mar 6 18:37:59 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated image data for DataTransferWidget

Revision 6105  Directory Listing
Modified Thu Mar 6 18:36:10 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
ENH: link against MRML so can get the http handler superclass

Revision 6104  Directory Listing
Modified Thu Mar 6 18:24:46 2008 UTC (9 years, 6 months ago) by taox
Original Path: trunk
ENH: Add an option to load a single file from a series.

Revision 6103  Directory Listing
Modified Thu Mar 6 18:13:23 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: Need to use a FILE* for the local files, and pass it as a curl opt. Need to Init and CloseTransfer. Added error checking. Using the default curl write call back

Revision 6102  Directory Listing
Modified Thu Mar 6 18:13:22 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: LocalFile needs to be a *FILE for use in curl C library

Revision 6101  Directory Listing
Modified Thu Mar 6 18:05:50 2008 UTC (9 years, 6 months ago) by taox
Original Path: trunk
ENH: works for Siemens data for both mosaic and split formats. 
TODO: when input is siemens mosaic image, need to figure out
the slice order in each mosaic.


Revision 6100  Directory Listing
Modified Thu Mar 6 17:47:06 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
COMP: casting to avoid compiler warnings

Revision 6099  Directory Listing
Modified Thu Mar 6 17:26:56 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated image data for DataTransferWidget

Revision 6097  Directory Listing
Modified Thu Mar 6 17:25:38 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated image resources for DataTransferWidget

Revision 6090  Directory Listing
Modified Thu Mar 6 13:28:10 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: add support for processing threads to request execution of scripts in the main thread for example to provide progress updates

Revision 6089  Directory Listing
Modified Thu Mar 6 12:37:55 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
BUG: remove experimental scripted task - fails, probably because the interpreter is not thread-safe

Revision 6088  Directory Listing
Modified Thu Mar 6 00:18:19 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: fixed infinite loop in get unique transfer id, added error checking

Revision 6087  Directory Listing
Modified Thu Mar 6 00:17:21 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: added error checking

Revision 6086  Directory Listing
Modified Wed Mar 5 22:45:53 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: making GetFileNamefromURI method return absolute path instead of just filename stripped from uri

Revision 6085  Directory Listing
Modified Wed Mar 5 22:36:24 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: debugging threaded access

Revision 6084  Directory Listing
Modified Wed Mar 5 22:25:43 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added some error macros

Revision 6083  Directory Listing
Modified Wed Mar 5 22:16:53 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: bug fixing, null pointers, string indexing...

Revision 6082  Directory Listing
Modified Wed Mar 5 21:51:58 2008 UTC (9 years, 6 months ago) by millerjv
Original Path: trunk
ENH: facility to allow CLI to select "any" type of volume node.

Revision 6081  Directory Listing
Modified Wed Mar 5 21:26:14 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: better parameters and modified event handling in test

Revision 6080  Directory Listing
Modified Wed Mar 5 21:09:07 2008 UTC (9 years, 6 months ago) by pieper
Original Path: trunk
ENH: added framework for scripted tasks that execute in the processing thread rather than the main thread.  These will require a little more refinement but are basically working

Revision 6076  Directory Listing
Modified Wed Mar 5 20:45:18 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
STYLE: fix typo

Revision 6075  Directory Listing
Modified Wed Mar 5 20:29:49 2008 UTC (9 years, 6 months ago) by naucoin
Original Path: trunk
BUG: added some error checking to avoid crashes, updated logic, in QueueRead

Revision 6074  Directory Listing
Modified Wed Mar 5 20:16:54 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added new methods to vtkCacheManager and fixed potential string parsing bug in HTTPHandler.

Revision 6073  Directory Listing
Modified Wed Mar 5 19:23:25 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: commenting out 'EnableCacheOverwriting' in CacheManager, adding new methods to RemoteIO

Revision 6072  Directory Listing
Modified Wed Mar 5 19:21:31 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: commented out the 'EnableCacheOverwriting' RemoteIO option in AppSettingsInterface for now, since we're holding off on the logic for this elsewhere

Revision 6071  Directory Listing
Modified Wed Mar 5 18:02:20 2008 UTC (9 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: