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Revision 15040 - Directory Listing
Modified Wed Sep 22 18:53:32 2010 UTC (7 years ago) by pieper
ENH: implementing changes described in the email linked below.
http://massmail.spl.harvard.edu/public-archives/slicer-devel/2010/005338.html


Revision 15038 - Directory Listing
Modified Wed Sep 22 17:43:30 2010 UTC (7 years ago) by pieper
Original Path: trunk/Modules
STYLE: remove unused method

Revision 15027 - Directory Listing
Modified Mon Sep 20 20:59:23 2010 UTC (7 years ago) by pieper
Original Path: trunk/Modules
BUG: fixes to make it easier to work with rotated volume acquisitions

Revision 15023 - Directory Listing
Modified Mon Sep 20 11:08:42 2010 UTC (7 years ago) by pohl
Original Path: trunk/Modules
BUG: should now compile again

Revision 15005 - Directory Listing
Modified Wed Sep 15 23:22:19 2010 UTC (7 years, 1 month ago) by jcfr
Original Path: trunk/Modules
ENH: EMSegment - Add PyTaskFilename attribute to vtkMRMLEMSNode class

Revision 15001 - Directory Listing
Modified Tue Sep 14 21:25:38 2010 UTC (7 years, 1 month ago) by pohl
Original Path: trunk/Modules
BUG: Address issue 974

Revision 14999 - Directory Listing
Modified Tue Sep 14 20:51:36 2010 UTC (7 years, 1 month ago) by domibel
Original Path: trunk/Modules
BUG: bug948 , fixes a SEGFAULT when saving intermediate results

Revision 14988 - Directory Listing
Modified Mon Sep 13 04:03:38 2010 UTC (7 years, 1 month ago) by pohl
Original Path: trunk/Modules
BUG: Made EMSegmenter Simple Mode work

Revision 14987 - Directory Listing
Modified Mon Sep 13 04:03:23 2010 UTC (7 years, 1 month ago) by pohl
Original Path: trunk/Modules
BUG: Made EMSegmenter Simple Mode work

Revision 14985 - Directory Listing
Modified Sun Sep 12 16:31:54 2010 UTC (7 years, 1 month ago) by pohl
Original Path: trunk/Modules
BUG: resolved issue 970 and polished output

Revision 14980 - Directory Listing
Modified Sat Sep 11 15:35:59 2010 UTC (7 years, 1 month ago) by pohl
Original Path: trunk/Modules
BUG: Resolve issue 0959 about multithreading

Revision 14882 - Directory Listing
Modified Thu Sep 2 18:02:52 2010 UTC (7 years, 1 month ago) by naucoin
Original Path: trunk/Modules
BUG: porting bug fix from branch revision 14881. Check for invalid nodes before setting node selectors to avoid breaking fiducial seeding after load in a mrml scene with invalid parameter nodes

Revision 14762 - Directory Listing
Modified Tue Aug 31 04:26:14 2010 UTC (7 years, 1 month ago) by finetjul
Original Path: trunk/Modules
BUG: Some labelMap volumes were not populated into the slice controller

It's because their LabelMap attributes are set after the node is added into
the scene. This result into a hiding of the node by
qMRMLSortFilterProxyModel and the node never get a chance to be visible
again as qMRMLSortFilterProxyModel doesn't observe the node (To be done).

Revision 14752 - Directory Listing
Modified Mon Aug 30 20:27:13 2010 UTC (7 years, 1 month ago) by pieper
Original Path: trunk/Modules
BUG: merge fix from trunk - avoid stepping outside data bounds when accessing volumes with no gradient info

Revision 14686 - Directory Listing
Modified Thu Aug 26 13:54:36 2010 UTC (7 years, 1 month ago) by vrnova
Original Path: trunk/Modules
ENH: added shading for non-mip presets

Revision 14685 - Directory Listing
Modified Thu Aug 26 13:50:42 2010 UTC (7 years, 1 month ago) by vrnova
Original Path: trunk/Modules
ENH: adaptive performance control in opengl texture mapping mapper

Revision 14670 - Directory Listing
Modified Tue Aug 24 15:37:47 2010 UTC (7 years, 1 month ago) by vrnova
Original Path: trunk/Modules
ENH: drop NCI mapper maximum sample rate to 2x to match VTK mappers.

Revision 14667 - Directory Listing
Modified Mon Aug 23 16:43:13 2010 UTC (7 years, 1 month ago) by pieper
Original Path: trunk/Modules
BUG: improve the calculation of local slice planes when starting with a non-axis align volume and improve error reporting

Revision 14666 - Directory Listing
Modified Mon Aug 23 16:28:53 2010 UTC (7 years, 1 month ago) by domibel
Original Path: trunk/Modules
BUG: changed title of buttons due to Ron's comments

Revision 14662 - Directory Listing
Modified Sat Aug 21 23:53:31 2010 UTC (7 years, 1 month ago) by jcfr
Original Path: trunk/Modules
STYLE: EMSegment - In vtkMRMLEMSNode - Update doxygen documentation and mark TCL related methods as deprecated

Revision 14656 - Directory Listing
Modified Fri Aug 20 15:33:29 2010 UTC (7 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixed null pointer causing crash in ProcessMRMLEvents

Revision 14637 - Directory Listing
Modified Thu Aug 19 06:51:05 2010 UTC (7 years, 2 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix unused variable warning in vtkMimxApplyImageBasedMaterialProperties

Revision 14610 - Directory Listing
Modified Wed Aug 18 10:12:40 2010 UTC (7 years, 2 months ago) by jcfr
Original Path: trunk/Modules
STYLE: EMSegment - Review vtkEMSegmentMRMLManager::ProcessMRMLEvent, now using reinterpret_cast.

Revision 14608 - Directory Listing
Modified Wed Aug 18 04:54:40 2010 UTC (7 years, 2 months ago) by pohl
Original Path: trunk/Modules
BUG: Removed out KWWidgets that do not work under Windows

Revision 14563 - Directory Listing
Modified Fri Aug 13 01:33:05 2010 UTC (7 years, 2 months ago) by finetjul
Original Path: trunk/Modules
BUG: Propagate API change into vtkSlicerOpenGLVolumeTextureMapper3D.

On 2010/07/20, the API for IsRenderSupported() has been changed in
vtkSlicerVolumeTextureMapper3D.h. However it has not been propagated in
vtkSlicerOpenGLVolumeTextureMapper.

Revision 14536 - Directory Listing
Modified Wed Aug 11 02:58:29 2010 UTC (7 years, 2 months ago) by tokuda
Original Path: trunk/Modules
BUG: fixed some leaks.

Revision 14507 - Directory Listing
Modified Mon Aug 9 18:37:12 2010 UTC (7 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: merge patches from 3.6 branch - avoid responding to non-gui events when applying editor effects

Revision 14471 - Directory Listing
Modified Thu Aug 5 00:16:06 2010 UTC (7 years, 2 months ago) by pohl
Original Path: trunk/Modules
BUG: Reading from disk now works correctly from the commandline module

Revision 14469 - Directory Listing
Modified Wed Aug 4 14:58:36 2010 UTC (7 years, 2 months ago) by pieper
Original Path: trunk/Modules
COMP: fix tl warning

Revision 14454 - Directory Listing
Modified Tue Aug 3 20:59:28 2010 UTC (7 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: don't set the ModifiedSinceRead flag on the input volume

Revision 14437 - Directory Listing
Modified Tue Aug 3 10:54:21 2010 UTC (7 years, 2 months ago) by pohl
Original Path: trunk/Modules
BUG: Slicer used to crash when image data is empty

Revision 14434 - Directory Listing
Modified Tue Aug 3 10:41:02 2010 UTC (7 years, 2 months ago) by pohl
Original Path: trunk/Modules
BUG: sampling flag was set too low

Revision 14433 - Directory Listing
Modified Tue Aug 3 10:36:32 2010 UTC (7 years, 2 months ago) by pohl
Original Path: trunk/Modules
ENH: includes now BrainsFit in EMSegmenter commandsline module

Revision 14415 - Directory Listing
Modified Mon Aug 2 13:44:18 2010 UTC (7 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: check for valid data before access (happens when reloading scene)

Revision 14407 - Directory Listing
Modified Fri Jul 30 13:20:28 2010 UTC (7 years, 2 months ago) by fedorov
Original Path: trunk/Modules
BUG: only linear transforms can be handled correctly


Revision 14405 - Directory Listing
Modified Fri Jul 30 03:27:13 2010 UTC (7 years, 2 months ago) by pohl
Original Path: trunk/Modules
BUG: Input channel has to have non-empty volume

Revision 14402 - Directory Listing
Modified Fri Jul 30 00:44:24 2010 UTC (7 years, 2 months ago) by pohl
Original Path: trunk/Modules
BUG: Resolved 892 by adding the channel

Revision 14384 - Directory Listing
Modified Thu Jul 29 18:17:23 2010 UTC (7 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: extend the functionality of the "reference" attribute for "image" type.
If the reference node is a label map, create LabelMapDisplayNode, and make
sure the output image is a label map as well.


Revision 14372 - Directory Listing
Modified Thu Jul 29 17:30:25 2010 UTC (7 years, 2 months ago) by demian
Original Path: trunk/Modules
BUG: Corrected the transorm handling of the DTI volume in fiducial seeding

Revision 14348 - Directory Listing
Modified Tue Jul 27 04:20:31 2010 UTC (7 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: image export via OpenIGTLink

Revision 14345 - Directory Listing
Modified Tue Jul 27 02:30:46 2010 UTC (7 years, 2 months ago) by blezek
Original Path: trunk/Modules
ENH: Removed stray references to scipy.


Revision 14337 - Directory Listing
Modified Mon Jul 26 15:03:06 2010 UTC (7 years, 2 months ago) by fedorov
Original Path: trunk/Modules
BUG: use the tag name attribute to set the name for output transform (the same
way it is already done for images)


Revision 14328 - Directory Listing
Modified Sat Jul 24 04:27:20 2010 UTC (7 years, 2 months ago) by jcfr
Original Path: trunk/Modules
ENH: Review how IsUpdating, IsConnecting, IsImporting, IsClosing flags and associated events work

The flags are now set/unset on a consistent way.

After each SceneAboutToBe{Imported, Connected, Closed, Restored}Event, the associated
flags (IsImporting, IsConnecting, IsClosing, IsRestoring and also IsUpdating flag) are
respectively ensured to be True.

After each Scene{Imported, Connected, Closed, Restored}Event, the
associated flags (IsImporting, IsConnecting, IsClosing, IsRestoring and
also IsUpdating) are ensured to be False.

The vtkMRMLScene API has also been reviewed, only the function SetIsImporting
is exposed. Note that SetIsImporting now takes care of sending the event
SceneAboutToBeImported and SceneImported.

In order to update IsRestoring flag, the class vtkMRMLSceneSnapshotNode
is now friend of vtkMRMLScene. The event SceneAboutToBeRestored is now invoked.

In case a node has not been registered, vtkMRMLParser will
attempt to guess its className using the associated Tag (startElement) using
that rule: vtkMRML<TAG>(Node)

CreateNodeByClass method now calls vtkDebugLeaks::DestructClass in case
the object couldn't be created using the vtkObjectFactory.

Testing of:
 - the state of different flags
 - number of node added / removed and associated event
has also been implemented in vtkMRMLSceneTest2.

Signed-off-by: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com>

Revision 14325 - Directory Listing
Modified Fri Jul 23 21:43:39 2010 UTC (7 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: catch case where radius can be empty string on startup of paint effect

Revision 14319 - Directory Listing
Modified Fri Jul 23 19:20:29 2010 UTC (7 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: rest of fix for 932

Revision 14308 - Directory Listing
Modified Thu Jul 22 20:18:34 2010 UTC (7 years, 2 months ago) by jcfr
Original Path: trunk/Modules
COMP: Make sure EMSegment{Algo, Reg, MRML, Graph} lib compile properly when KWWidgets is OFF

 - Make sure Tcl wrapping code is excluded when KWWidgets is OFF
 - Include the corespinding subdirectory also when Slicer3_BUILD_QTLOADABLEMODULES is ON
 - Include Slicer3ModulesMacros.cmake

Revision 14306 - Directory Listing
Modified Thu Jul 22 19:09:03 2010 UTC (7 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: added "reference" attribute to output "image" SEM type. If specified, 
the display node of the output image will be initialized from the display node
of the "image" parameter specified by the reference.


Revision 14285 - Directory Listing
Modified Thu Jul 22 03:05:56 2010 UTC (7 years, 2 months ago) by blezek
Original Path: trunk/Modules
ENH: Added support for FilteredTractography.

Added a stand-alone version of weave.  This allows the FilteredTractography plugin to be built once for users, without requiring a compiler to be installed on the system.  Tested for the moment on Mac, next stop Windows and Linux.


Revision 14274 - Directory Listing
Modified Wed Jul 21 17:20:32 2010 UTC (7 years, 2 months ago) by vrnova
Original Path: trunk/Modules
BUG: ensure mapper response to user iteraction after leave volumeRendering module

Revision 14261 - Directory Listing
Modified Tue Jul 20 16:05:36 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk/Modules
BUG: When changing of volume mapper, the extension manager was crashing

because it is expecting a valid renderwindow (and not NULL).

Revision 14260 - Directory Listing
Modified Tue Jul 20 16:05:31 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk/Modules
BUG: Scalar data array for histogram can have a name, take it into account

when retrieving the histogram as its name is a based on the scalar array
name.

Revision 14259 - Directory Listing
Modified Tue Jul 20 16:02:12 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
COMP: EMSegment - Added Emsegment{algorithm,mrml,registration,graph}_init(Tcl_interp) function to vtkEMSegmentGUI

This is required to force the load of the supporting libraries.
Otherwise, these ones won't be available from Tcl.

Revision 14258 - Directory Listing
Modified Tue Jul 20 14:29:55 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
COMP: EMSegment - Make sure EMSegment is build after EMSegment{Graph, Registration, Algorithm, MRML} and Volumes libraries

That should address the following issue:  http://www.cdash.org/CDash/viewBuildError.php?buildid=670245

Revision 14249 - Directory Listing
Modified Mon Jul 19 23:22:22 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
STYLE: EMSegment - Update vtkEMSegmentLogic to be compliant with Doxygen

Revision 14248 - Directory Listing
Modified Mon Jul 19 22:34:12 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix CMakeLists.txt related to EMSegment{Algorithm, Graph, MRML, Registration}

EMSegment now complies properly on Windows

Revision 14245 - Directory Listing
Modified Mon Jul 19 20:10:07 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
COMP: Split EMSegment in multiple libraries to be used by the QtPort

There are now 4 additionnal libraries:
 - EMSegmentAlgorithm (depends on VTK)
 - EMSegmentMRML (depends on MRML, ITK, EMSegmentAlgorithm, vtkSlicerVolumeLogic, SliceBaseLogic)
 - EMSegmentGraph (depends on VTK)
 - EMSegmentRegistration (depends on vtkITK)

Doing so allow to build these libraries also if Slicer3_USE_KWWIDGETS is OFF.

Note also that vtkEMSegmentMRMLManager has been moved into EMSegmentMRML library

Revision 14240 - Directory Listing
Modified Mon Jul 19 18:42:01 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk/Modules
BUG: The histogram "0" may not exist if the scalar array has a name

It can be "ScalarData0", use the same function to compose the histogram
name than the one used to add the histogram into the histogram set.

Revision 14229 - Directory Listing
Modified Mon Jul 19 03:50:41 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
BUG: After vtkMRMLSliceLogic is instantiated, use only SetAndObserveMRMLSceneEvents

Few classes were first calling setMRMLScene then SetAndObserveMRMLSceneEvents

Since both function now checks if the "MRMLScene to set" is different
from the scene already set, the second call was a No-op.

Using only SetAndObserveMRMLSceneEvents is enough to ensure that the scene
is set and the event observed.

Revision 14203 - Directory Listing
Modified Fri Jul 16 22:23:41 2010 UTC (7 years, 3 months ago) by pohl
Original Path: trunk/Modules
BUG: Addresses bug 899 - just checked if it could load it or not

Revision 14199 - Directory Listing
Modified Fri Jul 16 18:41:59 2010 UTC (7 years, 3 months ago) by pohl
Original Path: trunk/Modules
BUG: Possible Fix for 892

Revision 14163 - Directory Listing
Modified Thu Jul 15 12:10:59 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
ENH: MRMLScene - Change existing call to GetIsClosing into GetIsUpdating. Also updated Import function.

Scene::Import function doesn't set the IsClosing flag anymore

Code which was relying on GetIsClosing is now using GetIsUpdating

See http://massmail.spl.harvard.edu/public-archives/slicer-devel/2010/005057.html

Revision 14159 - Directory Listing
Modified Thu Jul 15 12:10:39 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
ENH: MRMLScene - Event SceneLoad{Start|End}Event renamed into SceneAboutToBeImportedEvent and SceneImportedEvent

The event were invoked within Scene::Import() method.
Whereas in slicer "Loading" a scene means that method Scene::Connect should be called

To limit confusion, the event invoked within the function Import have been
named after the associated function.

Revision 14157 - Directory Listing
Modified Thu Jul 15 12:10:20 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
ENH: MRMLScene - Rename SceneCloseEvent into SceneClosedEvent

The choice has been motivated to improve readability and limit confusion.

See http://massmail.spl.harvard.edu/public-archives/slicer-devel/2010/005057.html

Revision 14155 - Directory Listing
Modified Thu Jul 15 12:09:53 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
ENH: MRMLScene - Rename IsClosed flag into IsClosing

Since the flag is set to true when the scene start to close and set to false
when it's done. It was decided to rename it.

See http://massmail.spl.harvard.edu/public-archives/slicer-devel/2010/005057.html

Revision 14141 - Directory Listing
Modified Tue Jul 13 20:59:42 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk/Modules
BUG:vtkMRMLTractographyFiducialSeedingNode:make sure the refs are not null

Revision 14139 - Directory Listing
Modified Tue Jul 13 19:21:58 2010 UTC (7 years, 3 months ago) by alexy
Original Path: trunk/Modules
ENH: added UseIndexSpace option to LabelmapSeeding module

Revision 14134 - Directory Listing
Modified Tue Jul 13 14:19:43 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
BUG: presets work in NCI multi-volume mapper now.

Revision 14133 - Directory Listing
Modified Tue Jul 13 13:41:23 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX:  avoid tcl error: invalid command name "vtkTempxxxx"

Revision 14119 - Directory Listing
Modified Mon Jul 12 23:36:03 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk/Modules
COMP: Remove useless cmake message.

Revision 14113 - Directory Listing
Modified Mon Jul 12 16:22:26 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk/Modules
ENH: make the minimum paint radius 0.01 mm per request from Yanling

Revision 14111 - Directory Listing
Modified Mon Jul 12 14:37:33 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: on the fly gradient estimation in NCI mult-volume mapper

Revision 14109 - Directory Listing
Modified Sun Jul 11 22:22:39 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: on-the-fly gradient estimation in NCI multi-volume mapper

Revision 14108 - Directory Listing
Modified Sun Jul 11 21:40:15 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: on-the-fly gradient estimation in NCI multi-volume mapper

Revision 14107 - Directory Listing
Modified Sun Jul 11 17:28:29 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: pipeline for on-the-fly gradient estimation (remain hidden)

Revision 14105 - Directory Listing
Modified Sun Jul 11 03:19:04 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: better interface for performance control

Revision 14093 - Directory Listing
Modified Fri Jul 9 15:53:46 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
STYLE: Remove extra message statement in Modules/Tractorgraphy/Display/CMakeLists.txt

Revision 14071 - Directory Listing
Modified Wed Jul 7 22:03:18 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk/Modules
ENH: Separate the logic of the module "Fiber Bundles"

Revision 14069 - Directory Listing
Modified Wed Jul 7 18:36:31 2010 UTC (7 years, 3 months ago) by tokuda
Original Path: trunk/Modules
BUG: fix bug -- Linear transform couldn't be exported as POSITION message.

Revision 14021 - Directory Listing
Modified Sat Jul 3 00:58:38 2010 UTC (7 years, 3 months ago) by domibel
Original Path: trunk/Modules
STYLE: fix typo

Revision 14018 - Directory Listing
Modified Fri Jul 2 19:54:22 2010 UTC (7 years, 3 months ago) by alexy
Original Path: trunk/Modules
ENH: added scalars from tensor modes, added multiple labels in tractography/ROISelect

Revision 14016 - Directory Listing
Modified Fri Jul 2 14:51:22 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: added missing SceneLoadStartEvent observer

Revision 14012 - Directory Listing
Modified Fri Jul 2 12:39:22 2010 UTC (7 years, 3 months ago) by domibel
Original Path: trunk/Modules
ENH: adding version numbering for shared libraries

Revision 13987 - Directory Listing
Modified Wed Jun 30 01:18:09 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: give NCI mappers more meaningful names

Revision 13986 - Directory Listing
Modified Wed Jun 30 01:05:51 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: naming NCI mappers to be more meaningful

Revision 13985 - Directory Listing
Modified Wed Jun 30 01:00:17 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: naming NCI mappers to be more meaningful

Revision 13984 - Directory Listing
Modified Wed Jun 30 00:58:39 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: naming NCI mappers to be more meaningful

Revision 13983 - Directory Listing
Modified Tue Jun 29 14:43:23 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk/Modules
ENH: expose the InsideOut flag

Revision 13974 - Directory Listing
Modified Mon Jun 28 20:02:46 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk/Modules
ENH: Registration Matrix is not apply on tracker anymore (static registration matrix)

Revision 13969 - Directory Listing
Modified Mon Jun 28 16:09:22 2010 UTC (7 years, 3 months ago) by haehn
Original Path: trunk/Modules
ENH: Removed warnings of the Annotation module

Revision 13965 - Directory Listing
Modified Mon Jun 28 15:23:35 2010 UTC (7 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: remove support for 2d images -- something caused break of the build by
having this in the code


Revision 13964 - Directory Listing
Modified Mon Jun 28 11:45:15 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk/Modules
STYLE:  Removed outdated OrientImage from slicer tree.  As of recent ITK versions, and with Slicer requirement of CMAKE_USE_OREINTED_IMAGE=ON, the non-systematic use of OrientedImages is no longer needed.

Revision 13962 - Directory Listing
Modified Mon Jun 28 02:52:43 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk/Modules
ENH: Move vtkSlicerSliceLogic and vtkSlicerSliceLayerLogic to MRMLLogic library

Also move the dependent classes: vtkImageLabelOutline, vtkImageNeighborhoodFilter,
vtkImageResliceMask, vtkImageSlice to MRMLLogic

Ultimately, these class should be added to the slicer/VTK git fork and eventually
ported to the offical VTK repository.

All Cxx classes and Tcl script referencing vtkSlicerSliceLogic and vtkSlicerSliceLayerLogic
have also been updated.

Tcl wrapping hints have been moved from Base/Logic/Wrapping/Tcl/hints to
Libs/MRMLLogic/Wrapping/Tcl/hints

Revision 13955 - Directory Listing
Modified Fri Jun 25 20:33:04 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: changed NCI mappers to use high quality rendering when interaction stoped.

Revision 13953 - Directory Listing
Modified Fri Jun 25 17:00:48 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: changed NCI mappers to use high quality rendering when interaction stoped.

Revision 13951 - Directory Listing
Modified Fri Jun 25 15:10:50 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: changed NCI mappers to use high quality rendering when interaction stoped.

Revision 13939 - Directory Listing
Modified Thu Jun 24 18:24:14 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: removed debugging vtkErrorMacro statment

Revision 13935 - Directory Listing
Modified Thu Jun 24 14:52:11 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: fixed crash when using "load tutorial data" button in change tracker wizzard with tcl script to init volume rendering

Revision 13931 - Directory Listing
Modified Thu Jun 24 12:55:49 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: ICPE equation

Revision 13928 - Directory Listing
Modified Thu Jun 24 01:36:30 2010 UTC (7 years, 3 months ago) by clisle
Original Path: trunk/Modules
BUG: IA-FEMesh: fixing image based material properties on volumes imported from Slicer; removed compiler warning.  

Revision 13919 - Directory Listing
Modified Wed Jun 23 04:36:50 2010 UTC (7 years, 3 months ago) by pohl
Original Path: trunk/Modules
BUG: Addressed issue 856 as well as ROI issue

Revision 13911 - Directory Listing
Modified Tue Jun 22 17:32:28 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: a new API added so other modules may query if current mapper is supported

Revision 13905 - Directory Listing
Modified Tue Jun 22 13:39:44 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: modify pipeline to accept parameters node created from other module (programmatic usage of VolumeRendering module)

Revision 13897 - Directory Listing
Modified Tue Jun 22 11:20:18 2010 UTC (7 years, 3 months ago) by pohl
Original Path: trunk/Modules
BUG: Correct values are now displayed in registration panel

Revision 13835 - Directory Listing
Modified Thu Jun 17 08:27:01 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk/Modules
COMP: Moved unused files "Modules/GradientAnisotropicDiffusionFilter/QtGADModule*" to Attic

Revision 13834 - Directory Listing
Modified Thu Jun 17 08:26:48 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk/Modules
STYLE: Removed extra comments from Modules/GradientAnisotropicDiffusionFilter/CMakeLists.txt

Revision 13800 - Directory Listing
Modified Tue Jun 15 17:14:09 2010 UTC (7 years, 4 months ago) by clisle
Original Path: trunk/Modules
ENH: adding functionality for Summer 2010 meshing tutorial to meshing module.  Tested for leaks before uploading.  This change incorporates revisions 13784, 13785, 13799 from branches/testing/Meshing-V-3-1 branch. 

Revision 13797 - Directory Listing
Modified Mon Jun 14 20:19:47 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: start to init volume rendering pipeline after receiving SceneLoadEndEvent to make sure all nodes (parameters, volume property, etc) have been loaded.

Revision 13791 - Directory Listing
Modified Mon Jun 14 18:48:22 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: shrink the scope of randomly generated data set.

Revision 13790 - Directory Listing
Modified Mon Jun 14 18:46:56 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: used OpenIGTLinkIF lib.

Revision 13770 - Directory Listing
Modified Fri Jun 11 19:09:38 2010 UTC (7 years, 4 months ago) by tokuda
Original Path: trunk/Modules
COMP: fixing compiler warning: not all control paths return a value.

Revision 13764 - Directory Listing
Modified Fri Jun 11 16:58:42 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk/Modules
ENH: Remove unused color and glyph options from fiber bundle display

Revision 13762 - Directory Listing
Modified Fri Jun 11 13:32:48 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
BUG: fix crashes and leaks

Revision 13759 - Directory Listing
Modified Fri Jun 11 11:13:38 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk/Modules
BUG: removed several small bugs as well as included BRAINS registration suite

Revision 13758 - Directory Listing
Modified Fri Jun 11 01:06:38 2010 UTC (7 years, 4 months ago) by tokuda
Original Path: trunk/Modules
ENH: reslicing performance improvement by adaptive timer interval

Revision 13756 - Directory Listing
Modified Fri Jun 11 00:55:02 2010 UTC (7 years, 4 months ago) by tokuda
Original Path: trunk/Modules
ENH: reslicing performance improvement by adaptive timer interval

Revision 13755 - Directory Listing
Modified Thu Jun 10 22:11:04 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk/Modules
BUG: Fixed generic task bug with registration

Revision 13754 - Directory Listing
Modified Thu Jun 10 21:58:30 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk/Modules
BUG: removing a memory leak by unregistering and deleting a class member that was forgotten in the destructor

Revision 13753 - Directory Listing
Modified Thu Jun 10 21:53:26 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk/Modules
BUG: check for null mrml manager before deref pointer, was causing a crash on exit

Revision 13752 - Directory Listing
Modified Thu Jun 10 21:07:07 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk/Modules
ENH: expose the delete temporary files option for CLIs on the command line, and put it and the redirect module streams flag into the application settings interface. For now, using the flags on the command line will not override the registry settings

Revision 13741 - Directory Listing
Modified Thu Jun 10 17:34:33 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk/Modules
BUG: reducing memory leaks

Revision 13739 - Directory Listing
Modified Thu Jun 10 17:05:25 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk/Modules
BUG: move the addition of icons to the node selector class, ensures that the icons show up as soon as the menu is populated, rather than teh previous delay until after an update from mrml. Should form a template if wish to add automatically generated icons for other node types (ie volume slice snapshots)

Revision 13737 - Directory Listing
Modified Thu Jun 10 15:58:02 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
ENH: tip text for the new checkbutton.

Revision 13735 - Directory Listing
Modified Thu Jun 10 15:54:07 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: reconnect disconnected pipeline in debugging.

Revision 13734 - Directory Listing
Modified Thu Jun 10 15:47:13 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: reconnect disconnected pipeline in debugging.

Revision 13733 - Directory Listing
Modified Thu Jun 10 15:43:41 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
ENH: make volume rendering module compabitle with Julien's change.

Revision 13731 - Directory Listing
Modified Thu Jun 10 15:33:55 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
BUG: make widget expand with window and make more space for label name

Revision 13728 - Directory Listing
Modified Thu Jun 10 15:05:22 2010 UTC (7 years, 4 months ago) by tokuda
Original Path: trunk/Modules
ENH: add new features, which will be available in OpenIGTLink version 2

Revision 13727 - Directory Listing
Modified Thu Jun 10 15:01:30 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: changed VTK_IGT_EXPORT to VTK_BRAINLABMODULE_EXPORT.

Revision 13726 - Directory Listing
Modified Thu Jun 10 13:49:48 2010 UTC (7 years, 4 months ago) by finetjul
Original Path: trunk/Modules
ENH: Add a checkbox to prevent using interactive framerate

Revision 13725 - Directory Listing
Modified Thu Jun 10 12:00:39 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
BUG: cleaned up module logic management to avoid leaks and failed tests

Revision 13722 - Directory Listing
Modified Thu Jun 10 02:14:20 2010 UTC (7 years, 4 months ago) by clisle
Original Path: trunk/Modules
BUG: reverting to meshing module version 13632 to back out premature commit and remove memory leaks

Revision 13717 - Directory Listing
Modified Wed Jun 9 21:46:51 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
BUG: make the name of the new volume match the label name per request from Ron

Revision 13714 - Directory Listing
Modified Wed Jun 9 17:29:37 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk/Modules
BUG: fixing premature commit

Revision 13713 - Directory Listing
Modified Wed Jun 9 17:27:00 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk/Modules
BUG: reducing memory leaks and seg faults

Revision 13710 - Directory Listing
Modified Wed Jun 9 15:27:59 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk/Modules
BUG: In vtkBrainlabModuleWin32Header, change IGT_EXPORTS into BrainlabModule_EXPORTS

That should solve the "inconsistent DLL linkage" error happening on windows.

Revision 13709 - Directory Listing
Modified Wed Jun 9 14:05:28 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: turned off the install of TestData.

Revision 13697 - Directory Listing
Modified Tue Jun 8 18:40:28 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk/Modules
ENH: changed fiducial seeding to tubes by default

Revision 13688 - Directory Listing
Modified Tue Jun 8 15:16:11 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: BrainlabModule will be in the nightly build from now on.

Revision 13687 - Directory Listing
Modified Tue Jun 8 15:12:09 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: turned on Slice Intersections when navigation is on.

Revision 13682 - Directory Listing
Modified Tue Jun 8 12:32:06 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
COMP: rearrange code to avoid compile warning

Revision 13665 - Directory Listing
Modified Mon Jun 7 03:35:57 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk/Modules
ENH: changed TractographySeeding module to send to Fiberbundle module for display property

Revision 13663 - Directory Listing
Modified Mon Jun 7 02:18:50 2010 UTC (7 years, 4 months ago) by clisle
Original Path: trunk/Modules
ENH: working MRML integration with IA-FEMesh datatypes. Snapshot of changes still in progress. 

Revision 13661 - Directory Listing
Modified Sun Jun 6 15:23:34 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: triggering InteractionModeChangedEvent after scene loads to update the Interaction Node

Revision 13655 - Directory Listing
Modified Sun Jun 6 02:23:50 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: multi-volume rendering now listen to lighting property changes.

Revision 13648 - Directory Listing
Modified Sat Jun 5 01:42:51 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: fixed freezing when using multi-volume rendering for PET-CT visualization

Revision 13646 - Directory Listing
Modified Fri Jun 4 22:53:09 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk/Modules
BUG: the name of the registration module has changed


Revision 13645 - Directory Listing
Modified Fri Jun 4 22:21:30 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
ENH: reduce overhead for reslicing driven by OpenIGTLink

Revision 13642 - Directory Listing
Modified Fri Jun 4 21:24:05 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: incorrect widget called.

Revision 13641 - Directory Listing
Modified Fri Jun 4 21:08:29 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk/Modules
BUG: Packed version did not correctly tcl files

Revision 13638 - Directory Listing
Modified Fri Jun 4 18:30:32 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: used Four-up layout with BrainlabModule.

Revision 13627 - Directory Listing
Modified Fri Jun 4 14:47:14 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
ENH: removed debugging printf statement.

Revision 13621 - Directory Listing
Modified Fri Jun 4 02:31:19 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk/Modules
BUG: EMSegment/Graph/vtkImageGraph - Fix uninitialized variable warnings

Revision 13616 - Directory Listing
Modified Thu Jun 3 21:33:10 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
BUG: fixes to Editor in response to Sonia's testing - better handling of multiple structures with similar names (appended numbers), improved tooltips, ability to select same coloe as previous choice and other small tweaks

Revision 13612 - Directory Listing
Modified Thu Jun 3 17:42:04 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
ENH: set ROI slider resolution approporiately

Revision 13610 - Directory Listing
Modified Thu Jun 3 16:53:20 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
ENH: allow user to apply bg volume property to fg volume when doing volume comparison.

Revision 13607 - Directory Listing
Modified Thu Jun 3 15:01:59 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk/Modules
ENH: Removed obsolete EMSegmentCommandLine_GUIVersion command line application

Following email of Killian - 06/03/2010

Revision 13598 - Directory Listing
Modified Wed Jun 2 21:57:50 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
STYLE: improve formatting of status output

Revision 13596 - Directory Listing
Modified Wed Jun 2 19:58:10 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 13593 - Directory Listing
Modified Wed Jun 2 16:33:26 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
BUG: need to keep a copy of the pointer to the transform node so that observers can be removed from it - previous code would slow down because multiple oberservers where triggered every time the transform changed leading to much dupicated effort

Revision 13592 - Directory Listing
Modified Wed Jun 2 16:31:12 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
ENH: Distance Color Blending parameter setting.

Revision 13585 - Directory Listing
Modified Wed Jun 2 02:51:53 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
BUG: fixed Slicer crash due to threading.

Revision 13554 - Directory Listing
Modified Fri May 28 20:03:13 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
BUG: fixed a bug to display network connection status.

Revision 13553 - Directory Listing
Modified Fri May 28 19:35:16 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
ENH: New feature: Distance Color Blending (for helping to display depth information) in MIP rendering

Revision 13549 - Directory Listing
Modified Fri May 28 17:41:13 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: after loading an MRML scene automatically switch to next step.

Revision 13543 - Directory Listing
Modified Fri May 28 15:07:49 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: tweaking help text.

Revision 13538 - Directory Listing
Modified Fri May 28 12:28:43 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
STYLE: merge from 3.6 branch

Revision 13525 - Directory Listing
Modified Thu May 27 18:32:23 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
BUG: unify RequestRender processing and avoid warnings if renderer is deleted while idle process render request is still pending

Revision 13512 - Directory Listing
Modified Thu May 27 12:45:25 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk/Modules
COMP: fix windows compilation by making method signatures match implementation

Revision 13510 - Directory Listing
Modified Wed May 26 20:37:03 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk/Modules
ENH: provide a lock/unlock API that can be called to turn processing of events on or off for all rulers and angles

Revision 13495 - Directory Listing
Modified Tue May 25 22:47:49 2010 UTC (7 years, 4 months ago) by tokuda
Original Path: trunk/Modules
BUG: Fix registration error due to modification in newmat/ZLinAlg.cxx

Revision 13489 - Directory Listing
Modified Tue May 25 19:52:52 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk/Modules
ENH: fixed help link

Revision 13465 - Directory Listing
Modified Mon May 24 21:55:32 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk/Modules
ENH: use testing macro, test the set/get macros, adding boolean macros. ROIMin/Max could use some range checking, but the test passes as is.

Revision 13464 - Directory Listing
Modified Mon May 24 20:28:35 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk/Modules
ENH: add a test

Revision 13462 - Directory Listing
Modified Mon May 24 19:22:59 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk/Modules
COMP: fix compiler warnings/errors, unused var, return vals

Revision 13460 - Directory Listing
Modified Mon May 24 17:55:25 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: improved the help text.

Revision 13459 - Directory Listing
Modified Mon May 24 17:55:06 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: improved the help text.

Revision 13457 - Directory Listing
Modified Mon May 24 16:03:24 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk/Modules
ENH: New feature: Distance Color Blending (for helping to display depth information)

Revision 13456 - Directory Listing
Modified Mon May 24 15:47:58 2010 UTC (7 years, 4 months ago) by demian
Original Path: trunk/Modules
ENH: Regorganization of the Diffusion and Tractography related modules and improvement of their docmentation. Commited from revision 13442 Branch Slicer-3-6

Revision 13452 - Directory Listing
Modified Mon May 24 08:23:34 2010 UTC (7 years, 4 months ago) by clisle
Original Path: trunk/Modules
ENH: Meshing Module - adding image and model import capability

Revision 13424 - Directory Listing
Modified Thu May 20 17:14:29 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: more comprehensive testing


Revision 13422 - Directory Listing
Modified Thu May 20 15:25:59 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixing memory leak


Revision 13416 - Directory Listing
Modified Thu May 20 02:02:06 2010 UTC (7 years, 5 months ago) by rjosest
Original Path: trunk/Modules
ENH: Updating documentation

Revision 13415 - Directory Listing
Modified Wed May 19 20:30:38 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: propagating changes to fetchmi from 3-6 branch to trunk. Using Load instead of Import on scenes.

Revision 13407 - Directory Listing
Modified Wed May 19 00:01:45 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk/Modules
ENH: initialize scalar array.

Revision 13404 - Directory Listing
Modified Tue May 18 20:13:20 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
ENH: when see that a new ruler node has been added to the scene, make it active in the GUI (useful for control-m case)

Revision 13402 - Directory Listing
Modified Tue May 18 14:37:01 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
STYLE: update button tool tip with the hot key info

Revision 13401 - Directory Listing
Modified Tue May 18 13:47:26 2010 UTC (7 years, 5 months ago) by vrnova
Original Path: trunk/Modules
ENH: consistant GUI label and messages on rendering methods

Revision 13398 - Directory Listing
Modified Mon May 17 22:24:03 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
ENH: add a button to access the application gui's wrapper around making a new ruler from fiducials (it handles naming the ruler via a popup, so avoid recreating that code here)

Revision 13395 - Directory Listing
Modified Mon May 17 21:30:46 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
ENH: add info about how to create ruler from fids to help panel

Revision 13391 - Directory Listing
Modified Mon May 17 19:40:39 2010 UTC (7 years, 5 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 13372 - Directory Listing
Modified Fri May 14 15:37:46 2010 UTC (7 years, 5 months ago) by clisle
Original Path: trunk/Modules
BUG: fix typo on build logic for MainMirrorUnstructuredGridCellTest 

Revision 13359 - Directory Listing
Modified Thu May 13 19:59:53 2010 UTC (7 years, 5 months ago) by hliu
Original Path: trunk/Modules
ENH: added BrainlabModule.

Revision 13358 - Directory Listing
Modified Thu May 13 19:59:26 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
ENH: use smart pointer for the storage node to avoid leaks

Revision 13357 - Directory Listing
Modified Thu May 13 19:58:26 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
ENH: chain the testing macros by passing the classname for making the base mrml macro new node, provide some range ones that test outside and inside the ranges, use the display node test macros

Revision 13333 - Directory Listing
Modified Wed May 12 16:35:51 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
ENH: update the testing macros to offer explicit vars for testing int, double, vector, or to do random with a max value

Revision 13330 - Directory Listing
Modified Tue May 11 23:34:29 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: don't allow double invocation of threshold

Revision 13325 - Directory Listing
Modified Tue May 11 21:37:18 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
BUG: resolution is an int

Revision 13324 - Directory Listing
Modified Tue May 11 21:32:41 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
ENH: add a storage node test macro, fixing bugs it found, using new macros

Revision 13318 - Directory Listing
Modified Tue May 11 18:11:54 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: ClipModel does not call Render

Revision 13315 - Directory Listing
Modified Tue May 11 16:43:17 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk/Modules
ENH: Merge Slicer4 branch on trunk rev12438 -> rev13314

Revision 13313 - Directory Listing
Modified Tue May 11 14:22:04 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED:
Fixed VolRen ROI fit to volume for the case when volume was outside the original ROI range

Revision 13308 - Directory Listing
Modified Mon May 10 22:35:51 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
ENH: add mrml testing macros, start using them

Revision 13297 - Directory Listing
Modified Sat May 8 21:02:32 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: bringing welcome module text up to date (didn't include meausrements module)

Revision 13294 - Directory Listing
Modified Sat May 8 20:49:41 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: updating welcome module image data

Revision 13292 - Directory Listing
Modified Sat May 8 15:04:36 2010 UTC (7 years, 5 months ago) by lassoan
Original Path: trunk/Modules
COMP: Include gdcm.h instead of gdcmCommon.h (both work fine, but by definition gdcm.h "should be included by external users of gdcm")

Revision 13291 - Directory Listing
Modified Sat May 8 14:51:51 2010 UTC (7 years, 5 months ago) by lassoan
Original Path: trunk/Modules
COMP: Fixed (warning LNK4217: locally defined symbol) warnings by including gdcmCommon.h

Revision 13273 - Directory Listing
Modified Thu May 6 21:27:37 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
STYLE: better documentation for the segmentation tools

Revision 13268 - Directory Listing
Modified Thu May 6 16:07:59 2010 UTC (7 years, 5 months ago) by vrnova
Original Path: trunk/Modules
ENH: temporarily avoid 32/64 bit integer overslow warning message

Revision 13256 - Directory Listing
Modified Wed May 5 22:04:04 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: diff demons binary moved to bin, but tcl script was not updated


Revision 13255 - Directory Listing
Modified Wed May 5 22:02:47 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: move diff demons one level up to reduce the chances of exceeding 260
character path length limitation on windows


Revision 13252 - Directory Listing
Modified Wed May 5 20:00:46 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
STYLE: rename modules to match wiki documentation

Revision 13251 - Directory Listing
Modified Wed May 5 19:47:04 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
STYLE: improved documentation for segmentation and registration

Revision 13249 - Directory Listing
Modified Wed May 5 18:55:26 2010 UTC (7 years, 5 months ago) by vrnova
Original Path: trunk/Modules
ENH: ray length checking against possible numerical error causing video card freeze

Revision 13248 - Directory Listing
Modified Wed May 5 18:53:05 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
STYLE: remove 'python' from module names to match documentation (modules are named by functionality not by implementation language)

Revision 13246 - Directory Listing
Modified Wed May 5 18:25:48 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
ENH: enable extra documentation for module categories

Revision 13245 - Directory Listing
Modified Wed May 5 18:25:23 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: misnamed file

Revision 13244 - Directory Listing
Modified Wed May 5 18:20:22 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
ENH: framework for additional documentation for segmentation

Revision 13243 - Directory Listing
Modified Wed May 5 18:14:53 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
ENH: framework for additional documentation for registration

Revision 13240 - Directory Listing
Modified Wed May 5 14:43:34 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
ENH: fixed doc links

Revision 13238 - Directory Listing
Modified Wed May 5 13:24:49 2010 UTC (7 years, 5 months ago) by vrnova
Original Path: trunk/Modules
ENH: disconnect rendering pipeline in TeardownGUI()

Revision 13216 - Directory Listing
Modified Tue May 4 20:20:52 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: added documentation URI for lauren

Revision 13205 - Directory Listing
Modified Tue May 4 14:49:32 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: change button order per request from Ron

Revision 13198 - Directory Listing
Modified Tue May 4 01:09:15 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
BUG: CommandLine now works and task should be correctly downloaded 

Revision 13192 - Directory Listing
Modified Mon May 3 22:12:03 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixed links in welcome module

Revision 13191 - Directory Listing
Modified Mon May 3 22:05:36 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: fixed interpolation

Revision 13179 - Directory Listing
Modified Mon May 3 20:04:51 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
BUG: take out the widget name string for removed button

Revision 13177 - Directory Listing
Modified Mon May 3 19:43:39 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: updating welcome module's logo to reflect current version number

Revision 13176 - Directory Listing
Modified Mon May 3 19:43:13 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: updating welcome module's logo to reflect current version number

Revision 13175 - Directory Listing
Modified Mon May 3 19:27:19 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
COMP: fixed compiler warning and typo

Revision 13170 - Directory Listing
Modified Mon May 3 17:27:09 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: use the correct color table to be consistent with documentation


Revision 13167 - Directory Listing
Modified Mon May 3 15:06:08 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
COMP: removing Qdec module and library for 3.6 module cull, removed refs from Query Atlas, removed tests

Revision 13165 - Directory Listing
Modified Mon May 3 05:33:35 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
BUG: Resolving issues around command line module

Revision 13163 - Directory Listing
Modified Sun May 2 22:53:27 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
BUG: Fixed EMSegment Simple 

Revision 13162 - Directory Listing
Modified Sun May 2 18:34:27 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: uninitialized path after migrating from Applications/CLI


Revision 13158 - Directory Listing
Modified Sun May 2 15:59:56 2010 UTC (7 years, 5 months ago) by lantiga
Original Path: trunk/Modules
ENH: added link to 3.6 documentation pages

Revision 13157 - Directory Listing
Modified Sun May 2 01:52:47 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: build diff demons, install in bin


Revision 13156 - Directory Listing
Modified Sun May 2 00:42:19 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: move diff demons to Modules/ChangeTracker/CommandLineApplication
from Applications/CLI. This should be substituted with BRAINSDemonsWarp
in the future


Revision 13141 - Directory Listing
Modified Fri Apr 30 21:09:49 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid crash when pushing button before initializing tracker

Revision 13139 - Directory Listing
Modified Fri Apr 30 20:11:44 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix URL

Revision 13137 - Directory Listing
Modified Fri Apr 30 20:07:11 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix URL

Revision 13136 - Directory Listing
Modified Fri Apr 30 19:56:40 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix up boundary cases for working with multiple existing label maps with their own color nodes

Revision 13130 - Directory Listing
Modified Fri Apr 30 18:25:32 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
BUG: fix logic error, only delete if NOT null

Revision 13119 - Directory Listing
Modified Fri Apr 30 16:12:09 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: better handling of dialog box position and edit selections

Revision 13117 - Directory Listing
Modified Fri Apr 30 15:45:53 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
BUG: removed strange ROI bahavior and registration type bug - Template Builder works now - registration algorithm is still an issue

Revision 13113 - Directory Listing
Modified Fri Apr 30 13:29:47 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: switch to cross platform Round function

Revision 13112 - Directory Listing
Modified Fri Apr 30 13:26:58 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: fixed build error

Revision 13109 - Directory Listing
Modified Fri Apr 30 07:14:24 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
BUG: fixed preprocessing 

Revision 13108 - Directory Listing
Modified Fri Apr 30 07:13:41 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
BUG: fixed preprocessing 

Revision 13100 - Directory Listing
Modified Thu Apr 29 21:54:34 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: implement decisions from the module cull meeting http://wiki.na-mic.org/Wiki/index.php/2010_Slicer36_Module_Cull

Revision 13095 - Directory Listing
Modified Thu Apr 29 21:23:44 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: don't prompt for new label map when editing  non-scalar volumes

Revision 13091 - Directory Listing
Modified Thu Apr 29 21:05:45 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: changed modelmirror's category to 'surface models' and added a link to docu.

Revision 13087 - Directory Listing
Modified Thu Apr 29 20:13:26 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: don't prompt for new label map when editing  non-scalar volumes

Revision 13086 - Directory Listing
Modified Thu Apr 29 20:09:09 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: don't prompt for new label map when editing  non-scalar volumes

Revision 13085 - Directory Listing
Modified Thu Apr 29 19:38:21 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
BUG: fixed doc url

Revision 13082 - Directory Listing
Modified Thu Apr 29 19:21:56 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixed documenation link in the module help frame

Revision 13075 - Directory Listing
Modified Thu Apr 29 16:26:16 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: update documentation link

Revision 13068 - Directory Listing
Modified Thu Apr 29 15:40:06 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix module category

Revision 13067 - Directory Listing
Modified Thu Apr 29 15:22:26 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: update link to 3.6 documentation

Revision 13063 - Directory Listing
Modified Thu Apr 29 15:01:16 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: prevent divide by zero (should not happen)


Revision 13057 - Directory Listing
Modified Thu Apr 29 13:58:05 2010 UTC (7 years, 5 months ago) by hliu
Original Path: trunk/Modules
ENH: used the new link for the documentation.

Revision 13056 - Directory Listing
Modified Thu Apr 29 13:04:16 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: ugh, fixed stupid mistake in the image.

Revision 13055 - Directory Listing
Modified Thu Apr 29 12:56:56 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: Updating the Welcome module to track changes in Slicer.

Revision 13054 - Directory Listing
Modified Thu Apr 29 12:23:08 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix automatic selection of master and merge volume in editor based on what is currently selected in the Red slice window

Revision 13050 - Directory Listing
Modified Thu Apr 29 03:12:01 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: remove newline


Revision 13048 - Directory Listing
Modified Thu Apr 29 02:25:59 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: fixed dimensions check in volume renderer


Revision 13047 - Directory Listing
Modified Thu Apr 29 01:57:24 2010 UTC (7 years, 5 months ago) by millerjv
Original Path: trunk/Modules
BUG: remove newlines

Revision 13042 - Directory Listing
Modified Thu Apr 29 01:41:52 2010 UTC (7 years, 5 months ago) by millerjv
Original Path: trunk/Modules
BUG: remove newlines

Revision 13031 - Directory Listing
Modified Thu Apr 29 01:17:00 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED typo

Revision 13025 - Directory Listing
Modified Thu Apr 29 00:45:50 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
BUG: Could not load tasks

Revision 13012 - Directory Listing
Modified Wed Apr 28 23:29:51 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
BUG: Made changes to file so that it would correctly compile

Revision 13011 - Directory Listing
Modified Wed Apr 28 23:11:54 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: include estimates from Steve to help the user with target volume estimation


Revision 13010 - Directory Listing
Modified Wed Apr 28 23:08:48 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: show warning dialog only once; change the fiducial glyph change behavior
-- set sphere glyph only for those lists that are created through the fast
marching fiducial list node selector


Revision 13007 - Directory Listing
Modified Wed Apr 28 22:12:53 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk/Modules
ENH: updating help and acknowledgements.

Revision 13006 - Directory Listing
Modified Wed Apr 28 22:04:17 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk/Modules
ENH: update acknowledgements.

Revision 13005 - Directory Listing
Modified Wed Apr 28 22:03:48 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk/Modules
ENH: adding acknowledgements. 

Revision 12994 - Directory Listing
Modified Wed Apr 28 20:41:44 2010 UTC (7 years, 5 months ago) by hliu
Original Path: trunk/Modules
BUG: asked to search for module "OpenIGTLink IF" not "OpenIGTLinkIF".

Revision 12991 - Directory Listing
Modified Wed Apr 28 20:19:27 2010 UTC (7 years, 5 months ago) by millerjv
Original Path: trunk/Modules
ENH: formatting of generated documentation

Revision 12990 - Directory Listing
Modified Wed Apr 28 20:04:57 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
ENH: IBM source code for ARRA project called EMSegmenter

Revision 12989 - Directory Listing
Modified Wed Apr 28 19:58:30 2010 UTC (7 years, 5 months ago) by millerjv
Original Path: trunk/Modules
ENH: spacing in displayed documentation

Revision 12981 - Directory Listing
Modified Wed Apr 28 19:26:56 2010 UTC (7 years, 5 months ago) by hliu
Original Path: trunk/Modules
ENH: added Testing.

Revision 12968 - Directory Listing
Modified Wed Apr 28 15:30:11 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
ENH: extra testing infrastructure and testing for Editor

Revision 12964 - Directory Listing
Modified Wed Apr 28 12:53:21 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: getting rid of gdcm warnings by linking with ITKIO

Revision 12961 - Directory Listing
Modified Wed Apr 28 00:57:37 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: fixed typo


Revision 12960 - Directory Listing
Modified Wed Apr 28 00:32:00 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: check for bad call to GetName for incorrectly registered MRML Nodes

Revision 12959 - Directory Listing
Modified Wed Apr 28 00:06:57 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix calling sequence for use with ctest

Revision 12955 - Directory Listing
Modified Tue Apr 27 22:40:17 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: bypass vtkMRMLScene::GetNodesByName method because it seems it cannot be called from Tcl without leading to a leak

Revision 12954 - Directory Listing
Modified Tue Apr 27 21:37:21 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
ENH: do not allow single slice volumes selection in VolumeRendering. It causes crash.

Revision 12953 - Directory Listing
Modified Tue Apr 27 21:31:38 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix some leaks in test and clean up code

Revision 12952 - Directory Listing
Modified Tue Apr 27 20:41:22 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
ENH: default parameters for methods

Revision 12951 - Directory Listing
Modified Tue Apr 27 20:07:51 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
ENH: add test for new editor interface

Revision 12950 - Directory Listing
Modified Tue Apr 27 19:47:04 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
ENH: added reference VolView transfer functions

Revision 12949 - Directory Listing
Modified Tue Apr 27 19:39:38 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
ENH: added VolView transfer functions

Revision 12946 - Directory Listing
Modified Tue Apr 27 17:24:11 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: changing 'Tumor Mask' to 'VOI Mask' as per Ron's request, fixing bug in computing that was tabling results for VOIs with no voxels in them, and tried to address warnings in Logic from gdcm (i think it worked...)

Revision 12945 - Directory Listing
Modified Tue Apr 27 17:14:30 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix crash when adding multiple structures, and add test to search for leaks

Revision 12938 - Directory Listing
Modified Mon Apr 26 19:44:20 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG adding plot infrastructure which is stubbed out...

Revision 12937 - Directory Listing
Modified Mon Apr 26 19:43:50 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixing crashing bug when non-PET volume is selected as pet volume by checking for null pointer. Also adding plotting infrastructure which is currently stubbed out

Revision 12932 - Directory Listing
Modified Mon Apr 26 16:52:37 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix unitialized variable

Revision 12931 - Directory Listing
Modified Mon Apr 26 15:59:19 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: getting LUT labels to appear with icons as in colors module, Ron's request

Revision 12925 - Directory Listing
Modified Mon Apr 26 13:19:07 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: tweak GUI per request from Ron

Revision 12924 - Directory Listing
Modified Mon Apr 26 11:45:27 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: change name and position of volume check point enable button to save space

Revision 12921 - Directory Listing
Modified Mon Apr 26 05:33:58 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
ENH: IBM GUI interface finished

Revision 12914 - Directory Listing
Modified Sun Apr 25 19:02:05 2010 UTC (7 years, 5 months ago) by vrnova
Original Path: trunk/Modules
ENH: GMOM rendering in multi-volume gpu ray casting. GUI updated.

Revision 12913 - Directory Listing
Modified Sun Apr 25 14:51:59 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: fixed memory leak in ModelTransform 

Revision 12912 - Directory Listing
Modified Sun Apr 25 14:14:49 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
ENH: fixed vvt to mrml converter

Revision 12911 - Directory Listing
Modified Sat Apr 24 22:31:26 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
STYLE: update documentation link and PI info

Revision 12910 - Directory Listing
Modified Sat Apr 24 22:30:26 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
STYLE: update documentation link and PI info


Revision 12909 - Directory Listing
Modified Sat Apr 24 21:56:12 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED fixed warnings and leaks in ModelTransform

Revision 12908 - Directory Listing
Modified Sat Apr 24 21:49:10 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: added basic test of PichonFastMarching filter. To be extended


Revision 12907 - Directory Listing
Modified Sat Apr 24 21:22:07 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
COMP: trying to fix linker error

Revision 12906 - Directory Listing
Modified Sat Apr 24 20:47:13 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: did not commit change to the header

Revision 12905 - Directory Listing
Modified Sat Apr 24 20:27:23 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect dependency library name


Revision 12904 - Directory Listing
Modified Sat Apr 24 20:16:08 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: fix memory leak


Revision 12902 - Directory Listing
Modified Sat Apr 24 19:49:45 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
ENH: parser for vvt files

Revision 12901 - Directory Listing
Modified Sat Apr 24 19:13:33 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: adding more tests


Revision 12899 - Directory Listing
Modified Sat Apr 24 18:46:16 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
ENH: Functions needed for displaying  Intensity Distribution Graph

Revision 12898 - Directory Listing
Modified Sat Apr 24 18:42:13 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk/Modules
ENH: New IBM extension - interface for  Intensity Distribution Graph

Revision 12896 - Directory Listing
Modified Sat Apr 24 14:46:58 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
ENH: bug 574: added Model Transform module

Revision 12895 - Directory Listing
Modified Fri Apr 23 22:46:41 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: set the label node

Revision 12894 - Directory Listing
Modified Fri Apr 23 22:33:19 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: update documentation link

Revision 12893 - Directory Listing
Modified Fri Apr 23 22:30:48 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: 793 - fixes to make workflow cleaner

Revision 12892 - Directory Listing
Modified Fri Apr 23 21:58:03 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
STYLE: remove console output

Revision 12891 - Directory Listing
Modified Fri Apr 23 21:57:24 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: set the right color map for the labels

Revision 12885 - Directory Listing
Modified Fri Apr 23 17:53:42 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: for bug 793, don't show the editor tools if no label map exists yet

Revision 12882 - Directory Listing
Modified Fri Apr 23 16:37:41 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: work in progress for bug 793

Revision 12881 - Directory Listing
Modified Fri Apr 23 16:12:45 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
STYLE: updating help and ack frame

Revision 12877 - Directory Listing
Modified Thu Apr 22 22:58:30 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: made volume rendering work with label maps

Revision 12865 - Directory Listing
Modified Wed Apr 21 22:38:54 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk/Modules
COMP: get slicer compiling again, move method so not protected

Revision 12864 - Directory Listing
Modified Wed Apr 21 22:16:42 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid slowdowns when using editor paint tools by turning off corner annotations for 300ms on every mouse move.  Use unified set of methods in the superclass (SWidget) so that additional cases can be added if needed for performance (such as turning off fiducial labels)

Revision 12858 - Directory Listing
Modified Wed Apr 21 20:44:02 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: selecting presets should update volumes GUI (win/lev/thresh range widgets) via a direct call to method UpdateFramesFromMRML() on the VOlumesGUI. This had been a private method, so I had to expose it.

Revision 12846 - Directory Listing
Modified Tue Apr 20 22:44:15 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: reset the default ruler widget position to span the bounding box

Revision 12845 - Directory Listing
Modified Tue Apr 20 22:43:19 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
COMP: trying to reduce compiler warnings, float/double

Revision 12842 - Directory Listing
Modified Tue Apr 20 21:10:29 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: make the test succeed if it can't find the modules it need to fully test

Revision 12828 - Directory Listing
Modified Tue Apr 20 15:54:48 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: 792 set the editor default lut to the new short one

Revision 12825 - Directory Listing
Modified Tue Apr 20 04:58:27 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
ENH: Changes to interface with IBM Source code

Revision 12824 - Directory Listing
Modified Tue Apr 20 04:55:22 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
STYLE: Made changes to EMSMRML architecture so that it would be wrapped by Tcl

Revision 12822 - Directory Listing
Modified Mon Apr 19 23:03:53 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
BUG: fix bug -- registration class is not called from Transpeineal device mode

Revision 12820 - Directory Listing
Modified Mon Apr 19 22:01:39 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
COMP: fix build warning (conversion from double to float)

Revision 12814 - Directory Listing
Modified Mon Apr 19 21:43:07 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
BUG: fix Z-frame registration error due to a bug in newmat/ZLinAlg.cxx

Revision 12804 - Directory Listing
Modified Mon Apr 19 19:28:45 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: 792 use the new brain lut as the default

Revision 12803 - Directory Listing
Modified Mon Apr 19 18:23:51 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
ENH: adding test to OpenIGTLinkIF module.

Revision 12801 - Directory Listing
Modified Mon Apr 19 18:01:30 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: 792 new default label volume colours

Revision 12800 - Directory Listing
Modified Mon Apr 19 17:53:40 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: always check for the current color node in the red slice label volume, as it may change

Revision 12798 - Directory Listing
Modified Mon Apr 19 15:11:50 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: request a render after deleting a widget from the 3d scene

Revision 12794 - Directory Listing
Modified Sat Apr 17 18:30:37 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: 456
Update window, threshold ranges based on image range every time the image is modified.

Revision 12789 - Directory Listing
Modified Sat Apr 17 00:00:28 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: bring the angle widget in line with the ruler widget

Revision 12787 - Directory Listing
Modified Fri Apr 16 21:47:44 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: fix bug where visib toggle would stop ruler from responding to events. Reset the gui when nodes are removed. Use comma or tab in report. Cleaned up the GUI

Revision 12784 - Directory Listing
Modified Fri Apr 16 19:22:21 2010 UTC (7 years, 6 months ago) by vrnova
Original Path: trunk/Modules
ENH: MIP+MIP mode in multi-volume rendering

Revision 12783 - Directory Listing
Modified Fri Apr 16 18:17:03 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fixes to avoid warnings in vtk 5.6

Revision 12773 - Directory Listing
Modified Fri Apr 16 02:13:45 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: remove mouse event observers if the module is exited while in ROI
selection step


Revision 12772 - Directory Listing
Modified Fri Apr 16 01:34:01 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
ENH: remove selector for scan2 segmentation


Revision 12768 - Directory Listing
Modified Thu Apr 15 21:05:50 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
STYLE: Removed additional print outs 

Revision 12760 - Directory Listing
Modified Thu Apr 15 13:56:34 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix issues from bug 810

Revision 12751 - Directory Listing
Modified Wed Apr 14 16:29:05 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
BUG: Would not compile on Ubuntu 9.10 bc it could not find vector.h

Revision 12750 - Directory Listing
Modified Wed Apr 14 16:03:37 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
ENH: Included more plugins for IBM source code

Revision 12722 - Directory Listing
Modified Tue Apr 13 02:18:47 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk/Modules
COMP: Removed linux compilation warnings in ProstateNav

Revision 12721 - Directory Listing
Modified Mon Apr 12 23:36:42 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk/Modules
BUG: ProstateNav module fixes (memory leaks, compatibility with transformed images, models, fiducials, etc.)

Revision 12715 - Directory Listing
Modified Mon Apr 12 16:11:56 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: make the sun compiler happy (compile error discovered by Attila)


Revision 12713 - Directory Listing
Modified Mon Apr 12 15:17:37 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
COMP: fixing std vector include

Revision 12711 - Directory Listing
Modified Sat Apr 10 03:03:08 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk/Modules
BUG: Various stability fixes (properly handle transformed images, update the volume selection when a new node is added, display full needle trajectory, fix verification clear function)


Revision 12710 - Directory Listing
Modified Sat Apr 10 02:36:28 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
ENH: Interface with IBM source code

Revision 12709 - Directory Listing
Modified Sat Apr 10 02:36:01 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
ENH: Interface with IBM source code

Revision 12708 - Directory Listing
Modified Sat Apr 10 02:34:36 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
ENH: Create Interface to IBM source code

Revision 12707 - Directory Listing
Modified Sat Apr 10 02:33:48 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
STYLE: Changed layout of Step

Revision 12706 - Directory Listing
Modified Sat Apr 10 02:33:03 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
STYLE: Changed layout of Step

Revision 12704 - Directory Listing
Modified Fri Apr 9 16:18:42 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk/Modules
BUG: Fixed calibration algorithm (code line was restored that had been previously removed when fixing compilation warnings)

Revision 12703 - Directory Listing
Modified Fri Apr 9 15:35:52 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
COMP: removing double/int warnings

Revision 12702 - Directory Listing
Modified Fri Apr 9 14:04:04 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED 763:
fixed the case when display widgets get stuck in no update flag

Revision 12701 - Directory Listing
Modified Fri Apr 9 06:06:20 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
ENH: Added interface to plug in IBM source code

Revision 12700 - Directory Listing
Modified Fri Apr 9 06:02:03 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
STYLE: Just changed how ProbImageData is shown in PrintSelf

Revision 12699 - Directory Listing
Modified Fri Apr 9 05:24:41 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
BUG: rolled back to bad revision in last commit - so I rolled back again to r9240 and only included bug fixes 

Revision 12696 - Directory Listing
Modified Thu Apr 8 22:02:20 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
COMP: getting rid of uninit var, casting compiler warnings

Revision 12680 - Directory Listing
Modified Wed Apr 7 17:37:48 2010 UTC (7 years, 6 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: fixed bug in multi-volume rendering compositing algorithm

Revision 12677 - Directory Listing
Modified Tue Apr 6 22:12:50 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: adding testing

Revision 12669 - Directory Listing
Modified Tue Apr 6 21:20:07 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: bring the angle gui and node into line with the ruler (bug 775): display the angle, moved elements around, added support for coloured handles (use the spheres to support this better). BUG: fixed the click to place issue with a little hack, still need to trigger updating when load a scene with new colours on end points. 

Revision 12668 - Directory Listing
Modified Tue Apr 6 21:17:02 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
STYLE: fix some comments.

Revision 12667 - Directory Listing
Modified Tue Apr 6 21:16:28 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
STYLE: fix some comments. BUG: make sure to check for null pointer before printing out current distance annot

Revision 12656 - Directory Listing
Modified Mon Apr 5 20:26:34 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
COMP: remove unused variable

Revision 12645 - Directory Listing
Modified Mon Apr 5 17:57:01 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: use the newly exposed get text actor to update the camera

Revision 12644 - Directory Listing
Modified Mon Apr 5 17:56:13 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: need to set SaveDialogOn so that can pick unexisting files

Revision 12640 - Directory Listing
Modified Sun Apr 4 15:18:28 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: finally hook up setting the angle annotation text colour now that VTK supports it

Revision 12639 - Directory Listing
Modified Sun Apr 4 14:02:13 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
STYLE: fix comment

Revision 12638 - Directory Listing
Modified Sun Apr 4 12:40:22 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk/Modules
COMP: Fixed ProstateNav linux compilation warnings

Revision 12637 - Directory Listing
Modified Sat Apr 3 19:29:47 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk/Modules
COMP: Removed ProstateNav working copy revision display from build messages

Revision 12636 - Directory Listing
Modified Sat Apr 3 18:54:21 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: fixed window/level threshold setting to 0 when loading scenes

Revision 12635 - Directory Listing
Modified Sat Apr 3 18:31:08 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk/Modules
COMP: Fixed ProstateNav compilation warnings

Revision 12631 - Directory Listing
Modified Sat Apr 3 00:10:03 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: getting rid of memory leaks, making a start on supporting multiple views, add export, actually remove widgets when get node removed

Revision 12630 - Directory Listing
Modified Fri Apr 2 23:09:21 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: fix the logic on the new ruler naming, so can just hit return if you don't care

Revision 12628 - Directory Listing
Modified Fri Apr 2 22:26:41 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: return 1 on success 0 on failure so app gui can give better feedback

Revision 12625 - Directory Listing
Modified Fri Apr 2 20:29:02 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: since 2d interactions are a bit iffy, use the last two fids on the active list to make a new ruler

Revision 12623 - Directory Listing
Modified Fri Apr 2 19:47:25 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: gracefully handle boundary case of non-convergence of equal step calculation

Revision 12622 - Directory Listing
Modified Fri Apr 2 19:35:42 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: make path use all fiducials and ENH: add camera angle control

Revision 12621 - Directory Listing
Modified Fri Apr 2 19:18:09 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: 791
Threshold switches to Msnual from Off when a slider moves.

Revision 12620 - Directory Listing
Modified Fri Apr 2 19:11:16 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: moved the distance calc into the node

Revision 12619 - Directory Listing
Modified Fri Apr 2 19:09:23 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: save the distance and current distance annotation in the node so that the 2d rulers can get at the info

Revision 12618 - Directory Listing
Modified Fri Apr 2 18:40:28 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: 624:
made all data loaders create nodes with unique names. Also renaming nodes in node selectors

Revision 12613 - Directory Listing
Modified Fri Apr 2 12:33:34 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: enable endoscpy module

Revision 12612 - Directory Listing
Modified Fri Apr 2 06:20:24 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
STYLE: Expand Infrastructure to include source code from IBM whenever flag in CMakeLists.txt file is set

Revision 12604 - Directory Listing
Modified Thu Apr 1 22:03:34 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leak

Revision 12603 - Directory Listing
Modified Thu Apr 1 22:02:44 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
COMP: fix warning

Revision 12602 - Directory Listing
Modified Thu Apr 1 21:55:30 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: revert to collapsible frames to avoid crash on exit

Revision 12599 - Directory Listing
Modified Thu Apr 1 21:23:58 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
STYLE: remove dead code

Revision 12598 - Directory Listing
Modified Thu Apr 1 21:17:46 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
ENH: recovering License file.

Revision 12597 - Directory Listing
Modified Thu Apr 1 21:17:26 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid FrameWithLabel as it was causing mystery crash on exit

Revision 12596 - Directory Listing
Modified Thu Apr 1 21:14:36 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
COMP: fixing compiler warnings

Revision 12590 - Directory Listing
Modified Thu Apr 1 20:37:55 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
COMP: fixing some compiler warnings

Revision 12589 - Directory Listing
Modified Thu Apr 1 20:32:44 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
ENH: new version is copied from NAMICSandBox.

Revision 12588 - Directory Listing
Modified Thu Apr 1 20:10:39 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: check for null scene

Revision 12587 - Directory Listing
Modified Thu Apr 1 20:08:58 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
COMP: activate ProstateNav module

Revision 12586 - Directory Listing
Modified Thu Apr 1 20:06:27 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: trying to fix crash on exit, memory leaks

Revision 12585 - Directory Listing
Modified Thu Apr 1 20:00:59 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
ENH: roll back to ProstateNav module revision 12570.

Revision 12584 - Directory Listing
Modified Thu Apr 1 19:45:07 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
ENH: delete ProstateNav temporally

Revision 12583 - Directory Listing
Modified Thu Apr 1 15:54:42 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: take out mm in angle annotation defaults

Revision 12582 - Directory Listing
Modified Thu Apr 1 15:42:15 2010 UTC (7 years, 6 months ago) by tokuda
Original Path: trunk/Modules
BUG: fixing bug 0000637 (OpenIGTLink crash if locator is not set) reported on Sep 1, 2009. 

Revision 12581 - Directory Listing
Modified Thu Apr 1 15:02:16 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
COMP: removing compiler warnings

Revision 12577 - Directory Listing
Modified Thu Apr 1 01:22:21 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk/Modules
ENH: added a new version of ProstateNav module.

Revision 12576 - Directory Listing
Modified Thu Apr 1 01:13:24 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk/Modules
ENH: removed ProstateNav module.

Revision 12575 - Directory Listing
Modified Wed Mar 31 23:34:22 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
ENH: new endoscopy module (very basic)

Revision 12573 - Directory Listing
Modified Wed Mar 31 23:00:57 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
ENH: add the format options menu

Revision 12572 - Directory Listing
Modified Wed Mar 31 22:50:33 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
ENH: add a drop down menu with some default annotation options

Revision 12571 - Directory Listing
Modified Wed Mar 31 22:20:15 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
ENH: new interface for helping manage volumes that are components of a larger labelmap

Revision 12570 - Directory Listing
Modified Wed Mar 31 21:56:21 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: tried to get the affine widget to work in 3d, but can't update it's internal transform when get a transform modified event, so disable it

Revision 12569 - Directory Listing
Modified Wed Mar 31 21:37:35 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
ENH: add convenience proc

Revision 12568 - Directory Listing
Modified Wed Mar 31 21:27:14 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix clone operation to handle scalar vs label map display nodes

Revision 12567 - Directory Listing
Modified Wed Mar 31 19:47:06 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
ENH: Rolled back functionality to Slicer3.4 (r9240) and only included bug fixes

Revision 12566 - Directory Listing
Modified Wed Mar 31 19:45:18 2010 UTC (7 years, 6 months ago) by pohl
Original Path: trunk/Modules
ENH: Rolled back functionality to Slicer3.4 (r9240) and only included bug fixes

Revision 12565 - Directory Listing
Modified Wed Mar 31 19:34:13 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk/Modules
ENH: Volume Rendering: activate vtk GPU rendering by default since Slicer uses VTK 5 6

Revision 12551 - Directory Listing
Modified Tue Mar 30 20:14:34 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: deal with active viewer widget being null and then not (solves problems with loading a mrml scene and getting crashes since was turning it on before interactor set, and when close scene the viewer widget is set to null

Revision 12550 - Directory Listing
Modified Tue Mar 30 19:52:29 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: change default annotation label format

Revision 12547 - Directory Listing
Modified Tue Mar 30 16:04:52 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk/Modules
ENH: added module IntegratedNavigation.

Revision 12544 - Directory Listing
Modified Tue Mar 30 15:35:52 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: do not ever pass NULL to cout


Revision 12540 - Directory Listing
Modified Mon Mar 29 23:01:24 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixing memory leaks


Revision 12539 - Directory Listing
Modified Mon Mar 29 20:11:27 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
ENH: more cout


Revision 12533 - Directory Listing
Modified Mon Mar 29 19:54:31 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
ENH: use the new vtk5.6 methods

Revision 12530 - Directory Listing
Modified Mon Mar 29 18:57:50 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
ENH: add printouts to the test to facilitate debugging failures on remote
sites


Revision 12529 - Directory Listing
Modified Mon Mar 29 18:02:29 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
ENH: MRML node test


Revision 12526 - Directory Listing
Modified Mon Mar 29 17:30:59 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
ENH: added basic testing for GUI classes


Revision 12525 - Directory Listing
Modified Mon Mar 29 16:41:18 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
STYLE: remove cout
BUG: fixing memory leaks


Revision 12524 - Directory Listing
Modified Mon Mar 29 16:32:24 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: with the default priority=0, the event does not reach the observer. I
don't know why.


Revision 12523 - Directory Listing
Modified Mon Mar 29 16:20:02 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: renaming


Revision 12522 - Directory Listing
Modified Mon Mar 29 16:18:20 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: renaming-related fixes


Revision 12521 - Directory Listing
Modified Mon Mar 29 15:58:57 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect default values, matrix leak


Revision 12520 - Directory Listing
Modified Mon Mar 29 15:51:57 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
ENH: interface changes, different approach to thresholds calculation from
user-defined segmentation


Revision 12518 - Directory Listing
Modified Mon Mar 29 13:24:47 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
ENH: fixing svn inconsistencies


Revision 12517 - Directory Listing
Modified Mon Mar 29 13:22:52 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
STYLE: ExtractSubvolumeROI is now CropVolume


Revision 12516 - Directory Listing
Modified Mon Mar 29 12:06:31 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
ENH: turn off deprecated ExtractSubvolume module

Revision 12513 - Directory Listing
Modified Sun Mar 28 16:12:39 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
ENH: make model effect now uses active color node to set default name.  also color box fixes in preparation for segmentation helper widget

Revision 12496 - Directory Listing
Modified Fri Mar 26 21:17:28 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED 743

Update display widgets when volume switches from scalar to label map and back.

Revision 12485 - Directory Listing
Modified Fri Mar 26 16:29:51 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
STYLE: update tool tips and labels

Revision 12484 - Directory Listing
Modified Fri Mar 26 14:53:09 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: 784
VolumeRendering presets stay selected

Revision 12481 - Directory Listing
Modified Fri Mar 26 03:17:44 2010 UTC (7 years, 6 months ago) by vmagnotta
Original Path: trunk/Modules
COMP: Fixed a compliation warning in
itkMimxImageToVtkUnstructuredGridFilter. The tests 
were also renamed to begin with Mimx for easy 
review.


Revision 12480 - Directory Listing
Modified Fri Mar 26 02:32:05 2010 UTC (7 years, 6 months ago) by hjohnson
Original Path: trunk/Modules
COMP:  Removed compiler warning due to double inclusion of the same tool

Revision 12471 - Directory Listing
Modified Thu Mar 25 19:32:49 2010 UTC (7 years, 6 months ago) by awiles
Original Path: trunk/Modules
ENH:Cleaned up code for 3.6 release.

Revision 12466 - Directory Listing
Modified Thu Mar 25 15:46:52 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
COMP: remove compiler warning about signed/unsigned comparison

Revision 12465 - Directory Listing
Modified Thu Mar 25 14:02:52 2010 UTC (7 years, 6 months ago) by vrnova
Original Path: trunk/Modules
ENH: cap maximum sampling rate

Revision 12448 - Directory Listing
Modified Wed Mar 24 16:49:28 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
ENH: change default annotation format (only 1 decimal place)

Revision 12439 - Directory Listing
Modified Tue Mar 23 23:24:29 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk/Modules
ENH: added a distance label, adjusted default location, end colour, moved things around in the gui

Revision 12433 - Directory Listing
Modified Tue Mar 23 13:44:29 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: updated 3D widgets to conform to new mouse-mode behavior. 2D widgets in Slice Viewer not yet done... work in progress.

Revision 12428 - Directory Listing
Modified Mon Mar 22 20:58:36 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 12427 - Directory Listing
Modified Mon Mar 22 20:03:19 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leak that led to failed test

Revision 12426 - Directory Listing
Modified Mon Mar 22 19:50:03 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 12421 - Directory Listing
Modified Mon Mar 22 17:05:42 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: disable all controls in the IO frame while adjusting segmentation result
(bug 762)


Revision 12409 - Directory Listing
Modified Sun Mar 21 19:54:45 2010 UTC (7 years, 7 months ago) by hliu
Original Path: trunk/Modules
ENH: customized the Planning step.

Revision 12408 - Directory Listing
Modified Sun Mar 21 18:35:33 2010 UTC (7 years, 7 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 12407 - Directory Listing
Modified Sun Mar 21 18:34:30 2010 UTC (7 years, 7 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 12399 - Directory Listing
Modified Fri Mar 19 18:48:21 2010 UTC (7 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fix for the welcome module gui panel size.

Revision 12395 - Directory Listing
Modified Fri Mar 19 18:04:01 2010 UTC (7 years, 7 months ago) by lassoan
Original Path: trunk/Modules
COMP: Fixed duplicate reference to CollectFiducials module

Revision 12393 - Directory Listing
Modified Fri Mar 19 15:31:02 2010 UTC (7 years, 7 months ago) by alexy
Original Path: trunk/Modules
ENH: changed default seeding space

Revision 12381 - Directory Listing
Modified Thu Mar 18 20:49:25 2010 UTC (7 years, 7 months ago) by hliu
Original Path: trunk/Modules
ENH: added module LiverAblation.

Revision 12379 - Directory Listing
Modified Thu Mar 18 16:45:55 2010 UTC (7 years, 7 months ago) by awiles
Original Path: trunk/Modules
ENH: Adding new module

Revision 12378 - Directory Listing
Modified Thu Mar 18 16:41:33 2010 UTC (7 years, 7 months ago) by awiles
Original Path: trunk/Modules
ENH: Adding a new module.

Revision 12374 - Directory Listing
Modified Thu Mar 18 00:56:41 2010 UTC (7 years, 7 months ago) by vmagnotta
Original Path: trunk/Modules
BUG: Fixed a number of leaks in vtk objects
that existed both in the filters and tests
that were written.



Revision 12371 - Directory Listing
Modified Wed Mar 17 17:33:18 2010 UTC (7 years, 7 months ago) by hliu
Original Path: trunk/Modules
ENH: development for landmark registration.

Revision 12369 - Directory Listing
Modified Tue Mar 16 23:59:24 2010 UTC (7 years, 7 months ago) by vmagnotta
Original Path: trunk/Modules
COMP: Attempting to fix a problem when building the
testing framework under windows.


Revision 12368 - Directory Listing
Modified Tue Mar 16 21:52:59 2010 UTC (7 years, 7 months ago) by vmagnotta
Original Path: trunk/Modules
BUG: Added missing files required for IA-FEMesh testing



Revision 12366 - Directory Listing
Modified Tue Mar 16 20:49:11 2010 UTC (7 years, 7 months ago) by vmagnotta
Original Path: trunk/Modules
BUG: Fixed the name of the copyright file.


Revision 12365 - Directory Listing
Modified Tue Mar 16 20:44:21 2010 UTC (7 years, 7 months ago) by vmagnotta
Original Path: trunk/Modules
ENH: Removed large image file from the repository.


Revision 12364 - Directory Listing
Modified Tue Mar 16 20:43:30 2010 UTC (7 years, 7 months ago) by vmagnotta
Original Path: trunk/Modules
ENH: Added and enabled IA-FEMesh testing.


Revision 12362 - Directory Listing
Modified Tue Mar 16 20:27:33 2010 UTC (7 years, 7 months ago) by vmagnotta
Original Path: trunk/Modules
ENH: Added testing for the IA-FEMesh module


Revision 12357 - Directory Listing
Modified Tue Mar 16 17:51:39 2010 UTC (7 years, 7 months ago) by hliu
Original Path: trunk/Modules
ENH: completed pivot calibaration.

Revision 12355 - Directory Listing
Modified Tue Mar 16 09:46:42 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk/Modules
COMP: stub out variable to fix compile warning

Revision 12352 - Directory Listing
Modified Mon Mar 15 20:54:45 2010 UTC (7 years, 7 months ago) by hliu
Original Path: trunk/Modules
BUG: implemented pivot calibration.

Revision 12347 - Directory Listing
Modified Mon Mar 15 12:59:56 2010 UTC (7 years, 7 months ago) by vrnova
Original Path: trunk/Modules
ENH: favor performance more than quality in single&multi-volume GPU ray casting to match with other mappers

Revision 12346 - Directory Listing
Modified Mon Mar 15 12:49:46 2010 UTC (7 years, 7 months ago) by vrnova
Original Path: trunk/Modules
ENH: reduce number of points in color transfer funciton when using volume-follow mode

Revision 12344 - Directory Listing
Modified Sun Mar 14 20:24:39 2010 UTC (7 years, 7 months ago) by hliu
Original Path: trunk/Modules
ENH: more development for PatientToImageRegistration module.

Revision 12331 - Directory Listing
Modified Wed Mar 10 20:27:49 2010 UTC (7 years, 7 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 12300 - Directory Listing
Modified Thu Mar 4 19:18:02 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk/Modules
BUG: also need to set the color node when it's currently null

Revision 12299 - Directory Listing
Modified Thu Mar 4 19:08:24 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk/Modules
ENH: use smart pointers to avoid memory leaks

Revision 12290 - Directory Listing
Modified Wed Mar 3 17:22:51 2010 UTC (7 years, 7 months ago) by hliu
Original Path: trunk/Modules
BUG: fixed bug with picking RAS on Green slice window.

Revision 12289 - Directory Listing
Modified Wed Mar 3 16:45:59 2010 UTC (7 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixing the volume rendering in the segmentation and results step


Revision 12276 - Directory Listing
Modified Tue Mar 2 19:42:28 2010 UTC (7 years, 7 months ago) by casey.goodlett
Original Path: trunk/Modules
ENH: Add support for vtkMRMLROINode to command line module logic and gui.

This enables command line modules to accept ROI nodes in addition to ROI lists.

Revision 12271 - Directory Listing
Modified Mon Mar 1 23:59:16 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk/Modules
BUG: VolumeRendering: temporally disable Minimum Intensity Projection.

Revision 12270 - Directory Listing
Modified Mon Mar 1 23:51:09 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk/Modules
BUG: VolumeRendering: remove memory leaks.

Revision 12269 - Directory Listing
Modified Mon Mar 1 22:25:55 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk/Modules
BUG: VolumeRendering: clipping planes must be in world coordinates. VolumeRendering, the vtkGPUVolumeRayCastMapper takes clipping planes in world coordinates, not local to the volume.

Revision 12268 - Directory Listing
Modified Mon Mar 1 22:25:51 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk/Modules
BUG: Correctly remove observers at destruction of vtkVolumeRenderingGUI

Revision 12257 - Directory Listing
Modified Fri Feb 26 16:14:34 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk/Modules
COMP: remove locally defined abs function, this already exists somewhere else, use fabs from std.

Revision 12254 - Directory Listing
Modified Fri Feb 26 15:01:56 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk/Modules
BUG: VolumeRendering: vtkGPUVolumeRayCastMapper handles XYZ (not RAS) coordinates for the cutting planes.

Revision 12248 - Directory Listing
Modified Thu Feb 25 23:03:38 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk/Modules
BUG: propagate the active viewer to the Measurements module

Revision 12247 - Directory Listing
Modified Thu Feb 25 23:02:42 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk/Modules
STYLE: change to triples slashes for doxygen commenting

Revision 12241 - Directory Listing
Modified Thu Feb 25 22:33:49 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk/Modules
COMP: Rename Slicer3_USE_CVS_HEAD into Slicer3_USE_VTK_CVSHEAD

Revision 12239 - Directory Listing
Modified Thu Feb 25 22:20:36 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk/Modules
ENH: Use vtkGPURayCastMapper as a volume rendering.

Revision 12209 - Directory Listing
Modified Thu Feb 25 16:21:57 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk/Modules
ENH: add flag so that widgets wanting to 'claim' the left mouse button can register this with the slice GUI - if not, the default behavior can happen (window/level)

Revision 12193 - Directory Listing
Modified Sat Feb 20 20:39:28 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk/Modules
BUG: Fix memory leak in vtkSlicerTractographyFiducialSeedingLogic by introducing the use of vtkSmartPointer

Revision 12192 - Directory Listing
Modified Sat Feb 20 20:39:24 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk/Modules
COMP: SlicerQT - Fix warnings related to Tractography module - Constructor of qSlicerTractographyFiducialSeedingModuleWidget was also missing call to superclass ctor.

Revision 12191 - Directory Listing
Modified Sat Feb 20 18:49:23 2010 UTC (7 years, 7 months ago) by lassoan
Original Path: trunk/Modules
ENH: Added mhd to the supported file extension list

Revision 12185 - Directory Listing
Modified Fri Feb 19 18:12:37 2010 UTC (7 years, 7 months ago) by fedorov
Original Path: trunk/Modules
STYLE: remove console output


Revision 12177 - Directory Listing
Modified Thu Feb 18 19:57:30 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
COMP: get rid of compiler warnings

Revision 12170 - Directory Listing
Modified Thu Feb 18 18:27:02 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
COMP: removing compiler warning

Revision 12168 - Directory Listing
Modified Thu Feb 18 17:01:02 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
COMP: reducing compiler errors. Also removed asserts as they crash all of Slicer. Conversion to doxygen comment style

Revision 12161 - Directory Listing
Modified Wed Feb 17 20:26:41 2010 UTC (7 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: widget is initialized before it is created


Revision 12150 - Directory Listing
Modified Tue Feb 16 23:30:57 2010 UTC (7 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: unregister observers if sent a null node

Revision 12149 - Directory Listing
Modified Tue Feb 16 22:48:52 2010 UTC (7 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH:  moved mrml events handling in logic for Qt Tractography module

Revision 12137 - Directory Listing
Modified Mon Feb 15 18:05:57 2010 UTC (7 years, 8 months ago) by finetjul
Original Path: trunk/Modules
ENH: VolumeRendering: try to remove memory leaks in the Volume Rendering.

Revision 12133 - Directory Listing
Modified Sat Feb 13 18:39:56 2010 UTC (7 years, 8 months ago) by taox
Original Path: trunk/Modules
BUG: when you loaded a label map, everything loaded after than was a lable map. This is fixed now.

Revision 12132 - Directory Listing
Modified Sat Feb 13 18:18:56 2010 UTC (7 years, 8 months ago) by vrnova
Original Path: trunk/Modules
ENH: added a new GUI entry for upcoming vtk edge gpu ray casting mapper

Revision 12131 - Directory Listing
Modified Sat Feb 13 18:00:09 2010 UTC (7 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH:  changed events handling in Qt Tractography module

Revision 12129 - Directory Listing
Modified Fri Feb 12 21:18:51 2010 UTC (7 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixing a null pointer problem: if volumes are added to a timeseries before the bundlenode is created, slicer crashes. In this fix, we check whether the node is NULL, and if so, a new node is created before assigning values to it.

Revision 12128 - Directory Listing
Modified Fri Feb 12 21:02:26 2010 UTC (7 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: make command line module ScaleWithEntry widgets accept the typed in value even if return key was not typed

Revision 12123 - Directory Listing
Modified Fri Feb 12 20:16:47 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
BUG: SlicerQT - In Tractography module, node registration is now done in the virtual method RegisterNodes associated with vtkSlicerLogic

This ensures the node are registered in the QtOnly application.

Revision 12120 - Directory Listing
Modified Fri Feb 12 14:34:23 2010 UTC (7 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid crash when printing nulls

Revision 12113 - Directory Listing
Modified Thu Feb 11 18:35:07 2010 UTC (7 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: remove manual call to ProcessReadData since it should be automatically triggered by the vtkSlicerApplicationLogic and shouldn't need to be called from the test.  Also add error message if data read times out

Revision 12104 - Directory Listing
Modified Thu Feb 11 15:30:44 2010 UTC (7 years, 8 months ago) by taox
Original Path: trunk/Modules
ENH: delete volume node when idle.

Revision 12102 - Directory Listing
Modified Thu Feb 11 03:56:43 2010 UTC (7 years, 8 months ago) by taox
Original Path: trunk/Modules
ENH: give user option to choose whether to leave previous/next in memory.

Revision 12096 - Directory Listing
Modified Thu Feb 11 03:07:31 2010 UTC (7 years, 8 months ago) by taox
Original Path: trunk/Modules
ENH: added capability to load previous/next file in a directory. All images kept in memory.

Revision 12095 - Directory Listing
Modified Wed Feb 10 23:56:06 2010 UTC (7 years, 8 months ago) by sylvain
Original Path: trunk/Modules
COMP: remove MRIBiasFieldCorrection as it is now a command line module (see Applications/CLI). The duplication of this module caused a crash when closing Slicer because MRIBiasFieldCorrection was deleted twice. Julien suggested that a better fix would be in the Slicer deletion mechanism since deletion should not be based only on the name/title of the module.

Revision 12080 - Directory Listing
Modified Tue Feb 9 19:28:11 2010 UTC (7 years, 8 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: fixed possible crash when internal parameter node is null

Revision 12079 - Directory Listing
Modified Tue Feb 9 19:03:07 2010 UTC (7 years, 8 months ago) by vrnova
Original Path: trunk/Modules
ENH: new feature to pause volume rendering module in scene loading (requested by Ron)

Revision 12069 - Directory Listing
Modified Tue Feb 9 01:17:44 2010 UTC (7 years, 8 months ago) by lassoan
Original Path: trunk/Modules
BUG: Fixed launcher error (non-QT Slicer doesn't start because missing QT paths)
ENH: All launcher scripts are in procedures and errors are captured and properly reported (more robust to any script error)
ENH: New launcher option (--no-error-popup) to not display errors in a popup (log only)
ENH: Use --no-error-popup for EMSegment tests that are expected to fail (to not confuse the user with error popups)
ENH: Added new slicer variable (::LAUNCHER_REPORT_VTK_ERRORS) to allow reporting of VTK errors as failed tests on the dashboard. By default it is turned off now. Set it to ON to capture more errors.

Revision 12060 - Directory Listing
Modified Mon Feb 8 19:15:49 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: wait for data to be read, triggering the process read queue manually

Revision 12059 - Directory Listing
Modified Mon Feb 8 18:35:11 2010 UTC (7 years, 8 months ago) by awiles
Original Path: trunk/Modules
ENH: Adding a new module.

Revision 12036 - Directory Listing
Modified Sun Feb 7 15:52:16 2010 UTC (7 years, 8 months ago) by ibanez
Original Path: trunk/Modules
COMP: Fixing warning about SourImage function argument shadowing the member variable fo the same name.


Revision 12035 - Directory Listing
Modified Sun Feb 7 15:51:22 2010 UTC (7 years, 8 months ago) by ibanez
Original Path: trunk/Modules
COMP: Fixing warning messages about "i" variables shadowing the "i()" method. Naming a method "i()" is a really bad idea, for a matrix library..


Revision 12029 - Directory Listing
Modified Sat Feb 6 01:02:34 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix compilation warnings

Revision 12027 - Directory Listing
Modified Fri Feb 5 23:53:17 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix various compilation warning

Revision 12024 - Directory Listing
Modified Fri Feb 5 21:07:54 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
BUG: since Modules can be linked with a separate Logic library. Let's make sure the TCL_init function of the logic library is called.

That is achieved by adding to the GUI header:
// Had to add this to force loading of these support libraries
// Only libraries with entries that will be dynamically called from TCL need to be instantiated
#include "vtkTcl.h"
extern "C" int VtkslicerLOGIC_NAMEmodulelogic_Init(Tcl_Interp *interp);

where LOGIC_NAME should be uppercase.

And the following to the constructor of the GUI:


  // Try to load supporting libraries dynamically.  This is needed
  // since the toplevel is a loadable module but the other libraries
  // didn't get loaded
  Tcl_Interp* interp = this->GetApplication()->GetMainInterp();
  if (interp)
    {
    VtkslicerLOGIC_NAMEmodulelogic_Init(interp);
    }
  else
    {
    vtkErrorMacro("Failed to obtain reference to application TCL interpreter");
    }

Revision 12023 - Directory Listing
Modified Fri Feb 5 21:07:46 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
BUG: Fix vtkTypeRevisionMacro in vtkSlicerVolumesLogic. Add vtkSlicerModuleLogic instead of vtkObject

Revision 12018 - Directory Listing
Modified Fri Feb 5 17:23:48 2010 UTC (7 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH: made ROI widget in volume rendering to adjust slider ranges on Fit to Volume

Revision 12015 - Directory Listing
Modified Fri Feb 5 15:11:40 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
BUG: In AtlasCreator CMakeLists.txt, add vtkSlicerAtlasCreatorModuleLogic to the target library and remove vtkSlicerModelMirrorModuleLogic ones.

Revision 12007 - Directory Listing
Modified Fri Feb 5 06:35:11 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: Add vtkSlicerVolumeModuleLogic to FastMArchingSegmentation, MRAblation and ModelMirror

Revision 12006 - Directory Listing
Modified Fri Feb 5 06:35:04 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix various warnings

Revision 12005 - Directory Listing
Modified Fri Feb 5 06:34:52 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
ENH: Move FetchMI module logic into a dedicated Logic sub-directory

Note: The node still need to be registered overloading RegisterNode() method

Revision 12004 - Directory Listing
Modified Fri Feb 5 05:40:59 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: Add vtkSlicerVolumeModuleLogic dependency to  ChangeTracker, EMSegment, FourDAnalysis, FourDImage and ProstateNav module

Revision 12003 - Directory Listing
Modified Fri Feb 5 05:40:48 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
ENH: Move AtlasCreator module logic into a dedicated Logic sub-directory

Note: The node still need to be registered overloaded RegisterNode() method.

Revision 12002 - Directory Listing
Modified Fri Feb 5 04:57:56 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
ENH: Move ModelMirror module logic into a dedicated Logic sub-directory

Note: The node still need to be registered overloaded RegisterNode() method.

Revision 12001 - Directory Listing
Modified Fri Feb 5 04:39:38 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix various compilation warning

Revision 12000 - Directory Listing
Modified Fri Feb 5 04:39:25 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
ENH: Move Volumes module logic into a dedicated Logic subdirectory

Revision 11999 - Directory Listing
Modified Fri Feb 5 04:39:17 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
STYLE: Remove extra comments from Tractography/Logic/{CMakeLists.txt, *.h}

Revision 11991 - Directory Listing
Modified Thu Feb 4 23:46:52 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: wait for the CLI to complete before returning

Revision 11979 - Directory Listing
Modified Thu Feb 4 22:16:10 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: switch observations on widgets to use the event broker so can watch for specific events rather than AnyEvent, fixes extra process and update calls when leaving the editor

Revision 11974 - Directory Listing
Modified Thu Feb 4 19:05:58 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: fixing memory leak

Revision 11971 - Directory Listing
Modified Thu Feb 4 17:19:52 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: getting rid of a memory leak

Revision 11970 - Directory Listing
Modified Thu Feb 4 16:51:06 2010 UTC (7 years, 8 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding checkbox to turn on/off VolumeRendering module completely as requested by Ron.

Revision 11961 - Directory Listing
Modified Wed Feb 3 21:46:30 2010 UTC (7 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: Adding null pointer checking, preventing download and uploading requests from being triggered multiple times, added infrastructure for performance profiling

Revision 11960 - Directory Listing
Modified Wed Feb 3 21:45:50 2010 UTC (7 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: Adding null pointer checking, preventing download and uploading requests from being triggered multiple times, added infrastructure for performance profiling

Revision 11950 - Directory Listing
Modified Wed Feb 3 17:49:24 2010 UTC (7 years, 8 months ago) by fedorov
Original Path: trunk/Modules
STYLE: trying to fix warnings on win


Revision 11948 - Directory Listing
Modified Wed Feb 3 16:56:10 2010 UTC (7 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: revert accidental commit


Revision 11947 - Directory Listing
Modified Wed Feb 3 16:55:21 2010 UTC (7 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect input image


Revision 11942 - Directory Listing
Modified Wed Feb 3 03:43:18 2010 UTC (7 years, 8 months ago) by lassoan
Original Path: trunk/Modules
BUG: Fix VS8 compilation error (..\..\..\Slicer3\Modules\CommandLineModule\vtkCommandLineModuleLogic.cxx(853) : error C3861: 'time': identifier not found)

Revision 11934 - Directory Listing
Modified Tue Feb 2 22:19:17 2010 UTC (7 years, 8 months ago) by sylvain
Original Path: trunk/Modules
ENH: disabling MRIBiasFieldCorrection module in preparation of transition to CLI module

Revision 11933 - Directory Listing
Modified Tue Feb 2 21:57:24 2010 UTC (7 years, 8 months ago) by sylvain
Original Path: trunk/Modules
BUG: avoid warning on Windows

Revision 11932 - Directory Listing
Modified Tue Feb 2 21:55:13 2010 UTC (7 years, 8 months ago) by sylvain
Original Path: trunk/Modules
BUG: avoid warning on Windows

Revision 11930 - Directory Listing
Modified Tue Feb 2 21:15:53 2010 UTC (7 years, 8 months ago) by sylvain
Original Path: trunk/Modules
ENH: clean up the code and fix warnings

Revision 11928 - Directory Listing
Modified Tue Feb 2 17:18:15 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: fixing memory leak

Revision 11927 - Directory Listing
Modified Tue Feb 2 17:08:08 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: fix typo in test name

Revision 11926 - Directory Listing
Modified Tue Feb 2 17:04:09 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: clear up a memory leak

Revision 11923 - Directory Listing
Modified Tue Feb 2 16:50:34 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
ENH: adding a test for the paint effect, working on clearing up the memory leaks

Revision 11915 - Directory Listing
Modified Tue Feb 2 01:00:36 2010 UTC (7 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: fix typo in previous fix to  model maker

Revision 11914 - Directory Listing
Modified Tue Feb 2 00:56:52 2010 UTC (7 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leaks in model maker

Revision 11913 - Directory Listing
Modified Mon Feb 1 19:38:09 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: CMakeLists.txt - Loop though the Modules/XXX/Logic only if Slicer is build with Slicer3_USE_KWWIDGETS OFF

That means that the Logic subdirectory should be included in the CMakeLists.txt
specigic to the Module.

Revision 11912 - Directory Listing
Modified Mon Feb 1 19:28:59 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: Update Modules/Volumes/CMakeLists.txt, now includes vtkSlicerTractographyModuleLogic instead of SlicerTractographyLogic

Revision 11905 - Directory Listing
Modified Mon Feb 1 07:13:13 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: If a Logic directory exists in a modules directory, the directory will be automatically added.

The process allowing to build the 'Logic' library of a module had been factorized out.
That way the dedicated libray is build and both the QTModule and the regular Module can link against it.

There is not need to add Win32 header file or any configure header.

Using the macro Slicer3_build_module_logic automatically configure a file
of the form ${PROJECT_NAME}Export.h.
For example vtkSlicerTractographyModuleLogicExport.h where
name of the project is 'vtkSlicerTractographyModuleLogic'

Note also that the Logic sub-directory should *NOT* be included in the module
main CMakeLists.txt

As a convention, the module logic library should composed as described below:
  vtkSlicer[MODULE_NAME]ModuleLogic

Revision 11889 - Directory Listing
Modified Sat Jan 30 04:08:19 2010 UTC (7 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH:  Volumes module use Tractography/Logic library

Revision 11885 - Directory Listing
Modified Fri Jan 29 21:27:00 2010 UTC (7 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH:  Tractography KW and Qt module use Logic library

Revision 11881 - Directory Listing
Modified Fri Jan 29 20:33:27 2010 UTC (7 years, 8 months ago) by millerjv
Original Path: trunk/Modules
ENH: Simple Return Parameters from CommandLineModules (integer, integer-vector, etc.)

Revision 11878 - Directory Listing
Modified Fri Jan 29 18:06:44 2010 UTC (7 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH: separated Tractography Logic and MRML classes into a separate library called Logic for use by both KW and Qt

Revision 11855 - Directory Listing
Modified Fri Jan 29 00:02:08 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix various warnings + update CTestCustom.cmake to exclude openigtlink Libs

Revision 11851 - Directory Listing
Modified Thu Jan 28 23:34:15 2010 UTC (7 years, 8 months ago) by millerjv
Original Path: trunk/Modules
ENH: Any parameter can be hidden from the GUI

Revision 11848 - Directory Listing
Modified Thu Jan 28 22:30:15 2010 UTC (7 years, 8 months ago) by millerjv
Original Path: trunk/Modules
ENH: Added configuration to NodeSelectors to control whether they are allowed to select a default node (usually the first node). The CommandLineModules should not select defaults.

Revision 11843 - Directory Listing
Modified Thu Jan 28 22:05:16 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix various compilation warnings (unused, ...)

Note: size_t is an unsigned int, it means there is no need to check if
it's value is negative.

Revision 11837 - Directory Listing
Modified Thu Jan 28 18:51:24 2010 UTC (7 years, 8 months ago) by millerjv
Original Path: trunk/Modules
BUG: tell node selectors to show hidden nodes for DoubleArrayNodes

Revision 11832 - Directory Listing
Modified Thu Jan 28 17:06:05 2010 UTC (7 years, 8 months ago) by millerjv
Original Path: trunk/Modules
ENH: Extending CommandLineModule to support measurement tag (for plots)

Revision 11827 - Directory Listing
Modified Thu Jan 28 15:41:22 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: try to clean up memory leaks, not quite there yet

Revision 11823 - Directory Listing
Modified Thu Jan 28 09:09:23 2010 UTC (7 years, 8 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix various compilation warning (hidden virtual method, unused variable, ...)

Note1: Also moved vtkSlicerApplication.h up in the header include order
otherwise, when compiled with QT, it outputs that message:

#error qdatastream.h must be included before any header file that defines Status

Note2:
To fix such warning,
"base class‘base_class’should be explicitly initialized in the copy constructor"

the compy ctor and the '=' operator has been set as private member

Revision 11821 - Directory Listing
Modified Wed Jan 27 23:18:02 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
ENH: adding a test to trigger the model maker from the editor. To do: clean up memory leaks from to the editor gui 

Revision 11815 - Directory Listing
Modified Wed Jan 27 19:28:07 2010 UTC (7 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: enforce connectivity of the change label with the tumor segmentation
border


Revision 11814 - Directory Listing
Modified Wed Jan 27 19:12:06 2010 UTC (7 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: itk2vtk adapters; currently duplicated in EMSegmenter and BiasCorrection
module. TODO: reconcile these to use one instance from Libs/vtkITK (?)


Revision 11779 - Directory Listing
Modified Mon Jan 25 23:03:45 2010 UTC (7 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: move work on improved command line application to sandbox


Revision 11753 - Directory Listing
Modified Fri Jan 22 21:36:58 2010 UTC (7 years, 8 months ago) by ibanez
Original Path: trunk/Modules
COMP: Addression warnings about virtual methods being overloaded (and hidden) by methods with the same name but different signature in derived classes. The common cases were BuildGUI() and Enter().


Revision 11751 - Directory Listing
Modified Fri Jan 22 21:05:02 2010 UTC (7 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: porting fix for saving intermediate em seg files, and relative path files, from 3.4 branch

Revision 11734 - Directory Listing
Modified Fri Jan 22 19:04:17 2010 UTC (7 years, 8 months ago) by ibanez
Original Path: trunk/Modules
COMP: Addressing warnings about overloaded versions of virtual funcions hidding others from the base class. Most of them due to incomplete virtual tables.


Revision 11715 - Directory Listing
Modified Thu Jan 21 17:29:24 2010 UTC (7 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixed double-model creation bug and added null pointer checking.

Revision 11706 - Directory Listing
Modified Tue Jan 19 22:45:57 2010 UTC (7 years, 9 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: minor bug fixing and code cleanup. Added help and removed prototype warnings

Revision 11690 - Directory Listing
Modified Mon Jan 18 15:09:34 2010 UTC (7 years, 9 months ago) by naucoin
Original Path: trunk/Modules
STYLE: moving to c++ comments so they can be grabbed by doxygen

Revision 11680 - Directory Listing
Modified Sat Jan 16 23:05:06 2010 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
COMP: Fixed warnings about unused variables.


Revision 11679 - Directory Listing
Modified Sat Jan 16 22:57:09 2010 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
COMP: Fixing warnings about unused variables.


Revision 11678 - Directory Listing
Modified Sat Jan 16 22:53:37 2010 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
COMP: Fixing warnings about unused variables.


Revision 11654 - Directory Listing
Modified Fri Jan 15 23:08:33 2010 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
COMP: Putting updateAxis() in an anonymous namespace prevents it from being found as a symbol of a shared library. Removing now the namespace.


Revision 11652 - Directory Listing
Modified Fri Jan 15 20:34:42 2010 UTC (7 years, 9 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix various compilation warning

Revision 11651 - Directory Listing
Modified Fri Jan 15 19:58:18 2010 UTC (7 years, 9 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix various compilation warning

Revision 11649 - Directory Listing
Modified Fri Jan 15 18:06:40 2010 UTC (7 years, 9 months ago) by fedorov
Original Path: trunk/Modules
ENH: added bspline interpolator for the warper


Revision 11648 - Directory Listing
Modified Fri Jan 15 17:27:33 2010 UTC (7 years, 9 months ago) by pieper
Original Path: trunk/Modules
BUG: remove final sleep - there seems to be a linux-specific bug in which a process that exits while there is a sleep timer active will hang instead of exit (stack trace indicates the process stays in select() forever

Revision 11647 - Directory Listing
Modified Fri Jan 15 16:28:20 2010 UTC (7 years, 9 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix various compilation warning

Revision 11640 - Directory Listing
Modified Thu Jan 14 19:54:04 2010 UTC (7 years, 9 months ago) by pieper
Original Path: trunk/Modules
BUG: replace stubbed out test with something more likely to pass.  This test needs to be further investigated to be sure processing has completed before analysis steps begin.  This may require a new method on the MRML scene to ensure that any deferred data read operations have completed

Revision 11638 - Directory Listing
Modified Thu Jan 14 18:52:57 2010 UTC (7 years, 9 months ago) by pieper
Original Path: trunk/Modules
STYLE: slightly more useful debugging output

Revision 11637 - Directory Listing
Modified Thu Jan 14 18:52:02 2010 UTC (7 years, 9 months ago) by pieper
Original Path: trunk/Modules
BUG: extra testing in case node could not be allocated

Revision 11621 - Directory Listing
Modified Wed Jan 13 23:10:10 2010 UTC (7 years, 9 months ago) by pieper
Original Path: trunk/Modules
BUG: since data is read back asynchronously from the command line modules, need to check that all data has been read before going ahead and using it.  Also ENH: add some delays between steps so it is easier to see the test running.

Revision 11608 - Directory Listing
Modified Tue Jan 12 21:51:11 2010 UTC (7 years, 9 months ago) by jcfr
Original Path: trunk/Modules
COMP: Fix various warning (C4701, C4100) in Base/CLI, Libs/{GenerateLM, qCTKWidgets, vtkITK, vtkTeem) and Modules/Meshing/IO.

Revision 11607 - Directory Listing
Modified Tue Jan 12 21:51:03 2010 UTC (7 years, 9 months ago) by jcfr
Original Path: trunk/Modules
COMP: Create folder Libs/MRMLCLI containing vtkMRMLCommandLineModuleNode

Since vtkMRMLCommandLineModuleNodehas been removed from Base/QTCLI and
Modules/CommandLineModule, this will solve the compile problem on Darwin.

Revision 11605 - Directory Listing
Modified Tue Jan 12 19:44:03 2010 UTC (7 years, 9 months ago) by sylvain
Original Path: trunk/Modules
ENH: update AtlasCreator based on GAD Module. Builds with Qt now.

Revision 11591 - Directory Listing
Modified Mon Jan 11 01:11:06 2010 UTC (7 years, 9 months ago) by sylvain
Original Path: trunk/Modules
ENH: remove render widget. clean user interface

Revision 11590 - Directory Listing
Modified Sun Jan 10 23:03:47 2010 UTC (7 years, 9 months ago) by sylvain
Original Path: trunk/Modules
BUG: add semi-colon after definition of a std::string

Revision 11589 - Directory Listing
Modified Sun Jan 10 22:45:55 2010 UTC (7 years, 9 months ago) by sylvain
Original Path: trunk/Modules
ENH: add link to documentation and author name in acknowledgement section following Steve's email

Revision 11572 - Directory Listing
Modified Fri Jan 8 21:58:04 2010 UTC (7 years, 9 months ago) by vrnova
Original Path: trunk/Modules
ENH: new behavior, when launching volume rendering on a new image data, color and opacity mapping is determined by window/level and lookup table in the Volumes module.

Revision 11562 - Directory Listing
Modified Fri Jan 8 07:06:30 2010 UTC (7 years, 9 months ago) by vrnova
Original Path: trunk/Modules
ENH: new feature (Volumes Following mode) (for bg volume only now)

Revision 11560 - Directory Listing
Modified Fri Jan 8 01:51:43 2010 UTC (7 years, 9 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding new feature (volume rendering appearance follows volumes module)

Revision 11554 - Directory Listing
Modified Thu Jan 7 23:17:14 2010 UTC (7 years, 9 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding new feature (volume rendering appearance follows volumes module)

Revision 11553 - Directory Listing
Modified Thu Jan 7 22:44:38 2010 UTC (7 years, 9 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding new feature (volume rendering appearance follows volumes module)

Revision 11548 - Directory Listing
Modified Thu Jan 7 20:39:29 2010 UTC (7 years, 9 months ago) by naucoin
Original Path: trunk/Modules
BUG: use the exec launcher if it's defined for a command line module with a certain file extension

Revision 11544 - Directory Listing
Modified Thu Jan 7 02:45:59 2010 UTC (7 years, 9 months ago) by vrnova
Original Path: trunk/Modules
ENH: user selected framerate will be saved with scene file
COMP: change default interactive framerate to 8 (was 5)

Revision 11541 - Directory Listing
Modified Wed Jan 6 18:55:47 2010 UTC (7 years, 9 months ago) by naucoin
Original Path: trunk/Modules
BUG: if can't find the dependentn modules, fail the test (have to exit at the end, as exit is over ridden and tcl will continue executing statements after it is called)

Revision 11534 - Directory Listing
Modified Wed Jan 6 00:28:30 2010 UTC (7 years, 9 months ago) by vrnova
Original Path: trunk/Modules
COMP: nicer handling of progress message

Revision 11531 - Directory Listing
Modified Tue Jan 5 21:31:36 2010 UTC (7 years, 9 months ago) by vrnova
Original Path: trunk/Modules
COMP: simpler framerate adjustment

Revision 11527 - Directory Listing
Modified Tue Jan 5 17:11:19 2010 UTC (7 years, 9 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: fixed logic hole in input validation code (node id uses a real string "NULL" for empty id)

Revision 11524 - Directory Listing
Modified Tue Jan 5 06:42:22 2010 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
BUG: Fixing instances of incorrect setting of the this->SingletonTag member variable.
     String member variables shouldn't be assigned from statically allocated strings.


Revision 11513 - Directory Listing
Modified Mon Jan 4 23:14:22 2010 UTC (7 years, 9 months ago) by vrnova
Original Path: trunk/Modules
COMP: shader program clean up

Revision 11512 - Directory Listing
Modified Mon Jan 4 23:05:35 2010 UTC (7 years, 9 months ago) by pieper
Original Path: trunk/Modules
BUG: fix stack-allocated module description that could go out of scope before being used

Revision 11508 - Directory Listing
Modified Mon Jan 4 19:10:35 2010 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
ENH: Removing .NoDartCoverage files and replacing them with the
     CTEST_CUSTOM_COVERAGE_EXCLUDE variable in the CTestCustom.cmake.in file.



Revision 11507 - Directory Listing
Modified Mon Jan 4 18:02:24 2010 UTC (7 years, 9 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: enforce inputs validation after scene loading. Sometimes inputs may be NULL after scene loading due to async loading such as http download

Revision 11489 - Directory Listing
Modified Fri Jan 1 19:32:43 2010 UTC (7 years, 9 months ago) by pieper
Original Path: trunk/Modules
BUG: update tractography test to account for multiple camera nodes and BUG: update SlicePlaneWidget to account for multiple viewers

Revision 11483 - Directory Listing
Modified Fri Jan 1 07:49:56 2010 UTC (7 years, 9 months ago) by pieper
Original Path: trunk/Modules
ENH: increase timout to account for slow machines and operating systems

Revision 11482 - Directory Listing
Modified Fri Jan 1 07:26:35 2010 UTC (7 years, 9 months ago) by pieper
Original Path: trunk/Modules
BUG: give test 300 seconds to run rather than 90 since we were getting false negatives (test failures) on windows 7 where the test takes longer to start)

Revision 11481 - Directory Listing
Modified Fri Jan 1 07:18:20 2010 UTC (7 years, 9 months ago) by pieper
Original Path: trunk/Modules
BUG: be sure results of command line module have been processed before operating on them

Revision 11436 - Directory Listing
Modified Tue Dec 29 21:00:12 2009 UTC (7 years, 9 months ago) by partyd
Original Path: trunk/Modules
ENH: fix VolumeModule tests to respect CMAKE_BUILD_TYPE on windows.

Revision 11430 - Directory Listing
Modified Tue Dec 29 20:35:21 2009 UTC (7 years, 9 months ago) by pieper
Original Path: trunk/Modules
BUG: add launcher to test commands

Revision 11428 - Directory Listing
Modified Tue Dec 29 19:57:59 2009 UTC (7 years, 9 months ago) by naucoin
Original Path: trunk/Modules
STYLE: give a bit more information when process exits with an error state

Revision 11412 - Directory Listing
Modified Tue Dec 29 12:55:25 2009 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
COMP: Fixed warnings about not used method arguments. Introduced the vtkNotUsed() macro.


Revision 11411 - Directory Listing
Modified Tue Dec 29 12:54:04 2009 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
COMP: Fixing warnings about unused variables. Introduced the vtkNotUsed() macro.


Revision 11410 - Directory Listing
Modified Tue Dec 29 12:53:33 2009 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
COMP: Fixing warning about virtual function SetFileName() not overriding base class method.
      The SetFileName() method is already provided by the vtkDataWriter class. (grandparent).
ENH:  Methods that take std::string as arguments should use them as const references.


Revision 11406 - Directory Listing
Modified Mon Dec 28 22:14:20 2009 UTC (7 years, 9 months ago) by jvs
Original Path: trunk/Modules
ENH: multiple algorithms implementation (Friman/McGraw), automatic console setup under windows

Revision 11404 - Directory Listing
Modified Sun Dec 27 01:43:57 2009 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
BUG: Since the tests commands were moved down to the ./Testing directory,
     we don't need ${CMAKE_CURRENT_SOURCE_DIR}/Testing/  to refere to the .tcl
     files anymore. It is enough to use ${CMAKE_CURRENT_SOURCE_DIR}.


Revision 11403 - Directory Listing
Modified Sun Dec 27 00:50:48 2009 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
ENH: Reorganizing the Testing directory and adding C++ test for DiffusionTensorEditor.


Revision 11374 - Directory Listing
Modified Tue Dec 22 16:58:16 2009 UTC (7 years, 9 months ago) by naucoin
Original Path: trunk/Modules
BUG: cleaning up memory leak on vtkTimerLog

Revision 11362 - Directory Listing
Modified Mon Dec 21 21:14:08 2009 UTC (7 years, 9 months ago) by ibanez
Original Path: trunk/Modules
ENH: Adding .NoDartCoverage files inside the Testing subdirectories
     in order to exclude them from the computation of code coverage.


Revision 11359 - Directory Listing
Modified Mon Dec 21 01:01:14 2009 UTC (7 years, 9 months ago) by fedorov
Original Path: trunk/Modules
ENH: added isotropic resampling mode


Revision 11334 - Directory Listing
Modified Thu Dec 17 18:30:53 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
ENH: Adding Tofts model based on Biexponential input.

Revision 11297 - Directory Listing
Modified Tue Dec 15 16:37:24 2009 UTC (7 years, 10 months ago) by naucoin
Original Path: trunk/Modules
STYLE: added link to new doc page

Revision 11263 - Directory Listing
Modified Sun Dec 13 03:18:32 2009 UTC (7 years, 10 months ago) by fedorov
Original Path: trunk/Modules
ENH: updated documentation


Revision 11262 - Directory Listing
Modified Sun Dec 13 02:06:19 2009 UTC (7 years, 10 months ago) by fedorov
Original Path: trunk/Modules
BUG: fix viewerwidget access call


Revision 11250 - Directory Listing
Modified Fri Dec 11 01:43:50 2009 UTC (7 years, 10 months ago) by jcfr
Original Path: trunk/Modules
ENH: Update vtkEventBroker to follow a more robust singleton pattern.

Since we are sure to have on instance per-process, all client should call
vtkEventBroker::GetInstance() and no bother using New/Delete

It follow now the nifty counter idiom:
http://en.wikibooks.org/wiki/More_C%2B%2B_Idioms/Nifty_Counter

Largely inspired from the code of:
VTK/Common/vtkOutputWindow
VTK/Utilities/kwsys/SystemTools

It's also possible to use New (that way reference counting will be used)
Doing so the caller will be responsible to call the matching Delete.
For example, in Slicer3.cxx, TCL interpreter got a reference using New.
For that reason, we call the corresponding Delete.

It's also worth reading:
http://www.parashift.com/c++-faq-lite/ctors.html#faq-10.12

Revision 11231 - Directory Listing
Modified Wed Dec 9 08:36:59 2009 UTC (7 years, 10 months ago) by jcfr
Original Path: trunk/Modules
STYLE: Add comment in CMakeLists.txt about deprecated command.

Revision 11226 - Directory Listing
Modified Tue Dec 8 23:34:28 2009 UTC (7 years, 10 months ago) by jcfr
Original Path: trunk/Modules
ENH: In CMakeLists.txt, change deprecated SUBDIRS command into ADD_SUBDIRECTORY

See http://cmake.org/cmake/help/cmake-2-8-docs.html#command:subdirs

when subdirs command was taking a list of directory, change it
using the following pattern:

Before:
subdirs(sagarmatha kumbhu eiger)

After:
SET(dirs
  sagarmatha
  kumbhu
  eiger
  )
FOREACH(dir ${dirs})
  ADD_SUBDIRECTORY(${dir})
ENDFOREACH(dir)

Revision 11209 - Directory Listing
Modified Tue Dec 8 04:15:18 2009 UTC (7 years, 10 months ago) by jcfr
Original Path: trunk/Modules
ENH: Update CMakeLists.txt - CMake 2.6 is now required

The following line have been added:

CMAKE_MINIMUM_REQUIRED(VERSION 2.6)
IF(COMMAND CMAKE_POLICY)
  CMAKE_POLICY(SET CMP0003 NEW)
ENDIF(COMMAND CMAKE_POLICY)
MARK_AS_ADVANCED(CMAKE_BACKWARDS_COMPATIBILITY)

Revision 11175 - Directory Listing
Modified Sun Dec 6 22:41:22 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
COMP: disable FourDAnalysis module.

Revision 11172 - Directory Listing
Modified Sun Dec 6 06:39:09 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
BUG: fix bad memory management in FourDAnalysisGUI destractor (causing failures in Test 13 and 16).

Revision 11171 - Directory Listing
Modified Sun Dec 6 04:16:44 2009 UTC (7 years, 10 months ago) by hjohnson
Original Path: trunk/Modules
ENH:  Moved DicomToNrrd to its own directory to make it easier to build stand alone.

Revision 11155 - Directory Listing
Modified Fri Dec 4 19:25:43 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
BUG: Fixing memory leaks caused by FourDAnalysis module.

Revision 11154 - Directory Listing
Modified Fri Dec 4 17:01:35 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
COMP: FourDAnalysis module is disabled until memory leaks are fixed.

Revision 11147 - Directory Listing
Modified Fri Dec 4 05:42:35 2009 UTC (7 years, 10 months ago) by pieper
Original Path: trunk/Modules
BUG: fix a leak

Revision 11139 - Directory Listing
Modified Thu Dec 3 19:22:12 2009 UTC (7 years, 10 months ago) by vrnova
Original Path: trunk/Modules
ENH: update GUI label text to be more meaningful

Revision 11132 - Directory Listing
Modified Thu Dec 3 16:43:18 2009 UTC (7 years, 10 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED 700. Fixed clipping to stay on. Prevent vtkVolumeRenderingGUI::CheckAbort() method calling SetAbortRender(1) when no volumes selected (kludge) 

Revision 11131 - Directory Listing
Modified Thu Dec 3 12:49:41 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
BUG: fix compiler warning: unused variables.

Revision 11122 - Directory Listing
Modified Thu Dec 3 00:03:57 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
BUG: changing 'min' parameter for FourDAnalysis/vtkIntensityCurves::GetMeanMaxMinIntensity() to a reference variable.

Revision 11121 - Directory Listing
Modified Wed Dec 2 23:49:15 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
ENH: add plot type selection.

Revision 11114 - Directory Listing
Modified Wed Dec 2 14:35:21 2009 UTC (7 years, 10 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixing cmake 2.8 warning


Revision 11108 - Directory Listing
Modified Wed Dec 2 06:27:30 2009 UTC (7 years, 10 months ago) by jcfr
Original Path: trunk/Modules
STYLE: vtkFourDAnalysisLogic - Add missing comment after #endif

Revision 11102 - Directory Listing
Modified Tue Dec 1 22:40:26 2009 UTC (7 years, 10 months ago) by naucoin
Original Path: trunk/Modules
ENH: add in the second point colour as support for it is present on the vtk head

Revision 11087 - Directory Listing
Modified Tue Dec 1 03:54:59 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
COMP: fixing wanings in 4D Analysis module

Revision 11081 - Directory Listing
Modified Mon Nov 30 06:28:42 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
BUG: Errors related to python on Windows have been fixed. FourDAnalysis module is added to Modules/CMakeLists.txt.

Revision 11078 - Directory Listing
Modified Sun Nov 29 03:25:48 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
ENH: Removing FourDAnalysis module from CMakeLists.txt tentatively.

Revision 11075 - Directory Listing
Modified Sun Nov 29 01:47:57 2009 UTC (7 years, 10 months ago) by tokuda
Original Path: trunk/Modules
ENH: Moving XY Plotting and related classes from FourDAnalysis module to Base/GUI and Libs/MRML.

Revision 11068 - Directory Listing
Modified Sat Nov 28 15:19:00 2009 UTC (7 years, 10 months ago) by pieper
Original Path: trunk/Modules
COMP: shorten file names to avoid path length problems when running cpack 2.8 on windows

Revision 11064 - Directory Listing
Modified Fri Nov 27 16:26:31 2009 UTC (7 years, 10 months ago) by vrnova
Original Path: trunk/Modules
ENH: minor update

Revision 11045 - Directory Listing
Modified Wed Nov 25 14:32:23 2009 UTC (7 years, 10 months ago) by vrnova
Original Path: trunk/Modules
ENH: by default do not show ROI box (because by default ROI is off)

Revision 11044 - Directory Listing
Modified Tue Nov 24 22:33:00 2009 UTC (7 years, 10 months ago) by fedorov
Original Path: trunk/Modules
BUG: ROI label should not be under transform


Revision 11028 - Directory Listing
Modified Mon Nov 23 23:47:13 2009 UTC (7 years, 10 months ago) by naucoin
Original Path: trunk/Modules
BUG: don't crash when can't get the FiducialSeeding module

Revision 11027 - Directory Listing
Modified Mon Nov 23 23:05:34 2009 UTC (7 years, 10 months ago) by naucoin
Original Path: trunk/Modules
COMP: init var positionF

Revision 11026 - Directory Listing
Modified Mon Nov 23 23:04:33 2009 UTC (7 years, 10 months ago) by naucoin
Original Path: trunk/Modules
COMP: init var named begin, and make it int as that's what it's being used for

Revision 11025 - Directory Listing
Modified Mon Nov 23 23:01:14 2009 UTC (7 years, 10 months ago) by naucoin
Original Path: trunk/Modules
COMP: init var

Revision 11024 - Directory Listing
Modified Mon Nov 23 23:00:16 2009 UTC (7 years, 10 months ago) by naucoin
Original Path: trunk/Modules
COMP: init vars

Revision 11023 - Directory Listing
Modified Mon Nov 23 22:57:18 2009 UTC (7 years, 10 months ago) by naucoin
Original Path: trunk/Modules
COMP: removing unused vars

Revision 11020 - Directory Listing
Modified Mon Nov 23 22:09:37 2009 UTC (7 years, 10 months ago) by pieper
Original Path: trunk/Modules
ENH: turn off cursor icon while drawing to make it easier to see actual data

Revision 10979 - Directory Listing
Modified Wed Nov 18 17:50:19 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
STYLE: keep the original color for consistency with the documentation


Revision 10978 - Directory Listing
Modified Wed Nov 18 17:18:38 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
ENH: use single-voxel image to display ROI label overlay; ROI parent
transform is now supported
STYLE: cleaned some dead code


Revision 10977 - Directory Listing
Modified Wed Nov 18 16:30:36 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: opacity slider in thresholding mode

Revision 10974 - Directory Listing
Modified Tue Nov 17 17:49:04 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
BUG: fix incorrect initialization of the display node for label image input


Revision 10972 - Directory Listing
Modified Tue Nov 17 15:40:44 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: minor GUI update to show full label

Revision 10971 - Directory Listing
Modified Tue Nov 17 15:29:15 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding multi-vol rendering

Revision 10960 - Directory Listing
Modified Mon Nov 16 20:29:14 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: minor fix on GLSL shaders

Revision 10957 - Directory Listing
Modified Mon Nov 16 17:56:12 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: minor GUI update to clamp paint radius to be equal or greater than 1 (pixel) (will we have half pixel drawing support?)

Revision 10954 - Directory Listing
Modified Mon Nov 16 16:06:37 2009 UTC (7 years, 11 months ago) by tokuda
Original Path: trunk/Modules
BUG: Fixed bug reported by Yanling: label data is destroyed by FourDAnalysis Modlue.

Revision 10952 - Directory Listing
Modified Mon Nov 16 14:00:52 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: minor GUI update (easier to read names in selector widgets)

Revision 10942 - Directory Listing
Modified Thu Nov 12 14:03:14 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding dual 3D view support

Revision 10941 - Directory Listing
Modified Thu Nov 12 13:43:46 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding dual 3D view support

Revision 10940 - Directory Listing
Modified Wed Nov 11 18:16:08 2009 UTC (7 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: disabled the 'fit to window' that automatically happens when a volume from which a label map should be derived is selected in the Editor: mantisbug 690

Revision 10924 - Directory Listing
Modified Tue Nov 10 20:28:28 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding dual 3D view support

Revision 10916 - Directory Listing
Modified Tue Nov 10 16:00:34 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding dual 3D view support

Revision 10915 - Directory Listing
Modified Tue Nov 10 15:40:34 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding dual 3D view support

Revision 10912 - Directory Listing
Modified Mon Nov 9 19:58:05 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding dual 3D view support

Revision 10911 - Directory Listing
Modified Mon Nov 9 19:49:45 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding dual 3D view support

Revision 10909 - Directory Listing
Modified Mon Nov 9 16:22:54 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: minor GUI update so people can see full names in selector widgets

Revision 10902 - Directory Listing
Modified Sun Nov 8 17:57:54 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk/Modules
ENH: turn off corner annocations during interactive processes (paint, draw, pan, zoom) for much better performance

Revision 10892 - Directory Listing
Modified Fri Nov 6 18:36:53 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk/Modules
ENH: fix plot widget example

Revision 10891 - Directory Listing
Modified Fri Nov 6 18:31:59 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: code clean up

Revision 10890 - Directory Listing
Modified Fri Nov 6 17:57:42 2009 UTC (7 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: clarifying body weight approach to calculating suv by labeling with SUVbw

Revision 10889 - Directory Listing
Modified Fri Nov 6 17:57:06 2009 UTC (7 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: accounting for decay correction in SUV computation

Revision 10885 - Directory Listing
Modified Fri Nov 6 14:02:12 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk/Modules
ENH: skeleton for a plot widget test

Revision 10884 - Directory Listing
Modified Fri Nov 6 12:58:22 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: removed unused observer

Revision 10875 - Directory Listing
Modified Wed Nov 4 17:58:43 2009 UTC (7 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding changes recommended by ron in 11/3 meeting

Revision 10864 - Directory Listing
Modified Wed Nov 4 15:16:47 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding multi-volume rendering

Revision 10856 - Directory Listing
Modified Wed Nov 4 03:02:09 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: added  virtual void SetActiveViewer(vtkSlicerViewerWidget *activeViewer) to vtkSlicerModuleGUI, fixed crash in IA_FEMesh.

Revision 10852 - Directory Listing
Modified Tue Nov 3 23:03:20 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leaks that were leading to failing tests

Revision 10848 - Directory Listing
Modified Tue Nov 3 15:54:43 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: fixed crash caused by LoadVolumePropertyButton deletion code

Revision 10847 - Directory Listing
Modified Tue Nov 3 01:19:19 2009 UTC (7 years, 11 months ago) by barre
Original Path: trunk/Modules
ENH: multicam multiview, try something different

Revision 10845 - Directory Listing
Modified Mon Nov 2 19:11:47 2009 UTC (7 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: handling case where input volumes are non-dicom

Revision 10840 - Directory Listing
Modified Mon Nov 2 14:44:45 2009 UTC (7 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: updated with latest code from RSNA branch

Revision 10823 - Directory Listing
Modified Sat Oct 31 14:11:27 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk/Modules
ENH: added save/load of volume property

Revision 10821 - Directory Listing
Modified Sat Oct 31 00:03:41 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect initialization of the ras2ijk matrix for segmented image


Revision 10804 - Directory Listing
Modified Fri Oct 30 14:38:02 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
ENH: remove ChangeTracker tests. They are not testing the functionality used
by GUI. Testing needs to be updated to reflect the updated processing
workflow.


Revision 10803 - Directory Listing
Modified Fri Oct 30 14:18:49 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
ENH: use cubic interpolation instead of linear


Revision 10802 - Directory Listing
Modified Fri Oct 30 14:02:05 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: updaged ROI box behavior

Revision 10795 - Directory Listing
Modified Thu Oct 29 22:36:10 2009 UTC (7 years, 11 months ago) by barre
Original Path: trunk/Modules
ENH: support for new cameras and new views. Port from Slicer 3.4 branch. As mentioned on the mailing list, apologies for instabilities while these core changes are further tested. Fiducials do not seem to follow camera for example, this will be fixed. Send bugs to sebastien.barre@kitware.com; Thank you.

Revision 10779 - Directory Listing
Modified Wed Oct 28 22:07:30 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
ENH: fix windows compile issues, make .xml consistent with the new way of
defining roi


Revision 10778 - Directory Listing
Modified Wed Oct 28 21:51:57 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk/Modules
BUG: fool the angle widget into thinking that all three points have been defined. Otherwise the user has to click three times to see the handles

Revision 10777 - Directory Listing
Modified Wed Oct 28 20:53:47 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
BUG: demons registration discards orientation, so unless the input is axial,
the results of deformable analysis are garbage. Fix this in the ROI extraction
routine to enforce axial orientation.


Revision 10776 - Directory Listing
Modified Wed Oct 28 20:09:26 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk/Modules
BUG: don't show hidden nodes or linear transform nodes in the selector

Revision 10775 - Directory Listing
Modified Wed Oct 28 19:04:07 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk/Modules
STYLE: update the tool tip to give string formatting tips

Revision 10774 - Directory Listing
Modified Wed Oct 28 18:48:14 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk/Modules
STYLE: expand on the tool tip for string formatting

Revision 10771 - Directory Listing
Modified Wed Oct 28 16:49:06 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
BUG: missed resample factor


Revision 10770 - Directory Listing
Modified Wed Oct 28 16:32:57 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
BUG: remove non-portable fmin(), ENH: roi extraction debugging code, just in case


Revision 10769 - Directory Listing
Modified Wed Oct 28 16:25:58 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
ENH: results in agreement with GUI


Revision 10768 - Directory Listing
Modified Wed Oct 28 15:27:45 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
ENH: don't try to compile in-progress CLI


Revision 10761 - Directory Listing
Modified Tue Oct 27 04:37:33 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
ENH: reworked roi resampling procedure, now with just one resampling.
Eliminated inconsistency of roi extraction between gui and cli.


Revision 10756 - Directory Listing
Modified Mon Oct 26 22:14:31 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk/Modules
COMP: check return value from fgets

Revision 10753 - Directory Listing
Modified Mon Oct 26 21:17:10 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
STYLE: unused variable warning


Revision 10752 - Directory Listing
Modified Mon Oct 26 21:08:55 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding multi-volume rendering

Revision 10751 - Directory Listing
Modified Mon Oct 26 20:41:38 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
STYLE: get rid of warnings that show up with warn_unused_result


Revision 10749 - Directory Listing
Modified Mon Oct 26 14:30:18 2009 UTC (7 years, 11 months ago) by hliu
Original Path: trunk/Modules
STYLE: removed CUDA stuff from Modules.

Revision 10748 - Directory Listing
Modified Mon Oct 26 14:29:36 2009 UTC (7 years, 11 months ago) by hliu
Original Path: trunk/Modules
STYLE: removed CUDA stuff from VolumeRendering module.

Revision 10747 - Directory Listing
Modified Mon Oct 26 14:28:10 2009 UTC (7 years, 11 months ago) by hliu
Original Path: trunk/Modules
STYLE: removed CUDA stuff from Slicer trunk.

Revision 10746 - Directory Listing
Modified Mon Oct 26 03:55:30 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
BUG: use ImageReslicer filter for ROI extraction to address bug 674. 
The module now allows to have both the input volume and the ROI widget 
under transforms, and handles non-axis-aligned volumes. FIXME: incorrect 
initialization of colormap for resampled label volumes; handling mouse 
events does not account for parent transform. TODO: correct visualization 
of the ROI overlay in slice views for the cases when parent transforms are
present.


Revision 10745 - Directory Listing
Modified Mon Oct 26 02:12:51 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: disconnected CUDA pipeline (cuda mapper not ready at this stage)

Revision 10733 - Directory Listing
Modified Thu Oct 22 19:20:57 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: connected broken clipping pipeline on GPU ray cast II

Revision 10732 - Directory Listing
Modified Thu Oct 22 18:12:44 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk/Modules
BUG: Voxel origin in Slicer is at the center of the pixel. The implementation
made silent assumption that the origin is at the voxel corner. When resampling
factor is not equal to 1, the code would results in a resampled volume that is 
off by 0.5*userResampleConst in each dimension in the physical space.


Revision 10728 - Directory Listing
Modified Wed Oct 21 18:41:36 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
ENH: updated ROI tab UI

Revision 10727 - Directory Listing
Modified Wed Oct 21 15:35:06 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: borken transformation pipeline fixed

Revision 10705 - Directory Listing
Modified Tue Oct 20 19:29:11 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: adding fg volume rendering

Revision 10704 - Directory Listing
Modified Tue Oct 20 17:33:51 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
BUGFIX: threshold processing time order incorrect

Revision 10703 - Directory Listing
Modified Tue Oct 20 16:36:32 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
BUGFIX: GPU ray casting parameters not working

Revision 10701 - Directory Listing
Modified Tue Oct 20 15:07:50 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
BUGFIX: fg scalar opacity not calculated correctly

Revision 10699 - Directory Listing
Modified Tue Oct 20 13:57:33 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: abort rendering before switching different mappers (cpu, gpu, opengl texture) for safeguard purpose.

Revision 10698 - Directory Listing
Modified Tue Oct 20 13:38:53 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: roll back material parameters as slicer 3.4

Revision 10696 - Directory Listing
Modified Tue Oct 20 13:05:36 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: adding fg volume rendering

Revision 10694 - Directory Listing
Modified Mon Oct 19 21:05:23 2009 UTC (8 years ago) by pieper
Original Path: trunk/Modules
BUG: fix leak

Revision 10693 - Directory Listing
Modified Mon Oct 19 19:30:21 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: adding fg volume rendering

Revision 10685 - Directory Listing
Modified Mon Oct 19 15:56:33 2009 UTC (8 years ago) by pieper
Original Path: trunk/Modules
COMP: fix compile warnings and add FIXME comments were some review might be needed

Revision 10684 - Directory Listing
Modified Mon Oct 19 13:25:31 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
STYLE: warnings


Revision 10681 - Directory Listing
Modified Sun Oct 18 03:21:18 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect thresholding for histogram calculation; uninitialized
resampling mode in CLI


Revision 10680 - Directory Listing
Modified Fri Oct 16 22:11:47 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
ENH: shifting around the gui elements a bit

Revision 10679 - Directory Listing
Modified Fri Oct 16 21:58:51 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
ENH: Adding a node and widget for angles. TODO: figure out why need to click 3 times to set down the 3 handles still

Revision 10678 - Directory Listing
Modified Fri Oct 16 21:48:52 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
BUG: whole volume used to compute histogram instead of ROI; GUI/CLI results
still not consistent


Revision 10675 - Directory Listing
Modified Fri Oct 16 19:29:39 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: adding fg volume rendering

Revision 10674 - Directory Listing
Modified Fri Oct 16 18:55:40 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: adding fg volume rendering

Revision 10672 - Directory Listing
Modified Fri Oct 16 18:19:57 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: adding fg volume rendering

Revision 10669 - Directory Listing
Modified Fri Oct 16 16:41:56 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
STYLE: fixed help string

Revision 10667 - Directory Listing
Modified Fri Oct 16 14:40:30 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
STYLE: remove printouts


Revision 10666 - Directory Listing
Modified Fri Oct 16 14:31:53 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: thresholding added

Revision 10662 - Directory Listing
Modified Thu Oct 15 19:10:03 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: adding threshold function

Revision 10661 - Directory Listing
Modified Thu Oct 15 16:41:28 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: progress feedback when using a new input in volume rendering module

Revision 10660 - Directory Listing
Modified Thu Oct 15 16:32:10 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: progress feedback when loading a scene

Revision 10659 - Directory Listing
Modified Thu Oct 15 16:20:19 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
BUGFIX: fixed crash when loading a scene after start slicer and enter volumerendering module

Revision 10658 - Directory Listing
Modified Thu Oct 15 15:20:41 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
BUGFIX: correct cropping behavior on CPU ray casting and OpenGL texture mapping

Revision 10657 - Directory Listing
Modified Thu Oct 15 14:59:07 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: update clipping code to match clipping plane definition in vtkMRMLROINode.

Revision 10656 - Directory Listing
Modified Thu Oct 15 14:34:53 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: create default ROI node when selecting a new input.

Revision 10654 - Directory Listing
Modified Thu Oct 15 12:56:02 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
BUGFIX: fixed crash when selecting bg volume input after scene closed once.

Revision 10653 - Directory Listing
Modified Wed Oct 14 22:15:45 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
ENH: both metrics working, need to confirm same as GUI results, need to fix
memory leaks


Revision 10651 - Directory Listing
Modified Wed Oct 14 21:28:44 2009 UTC (8 years ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: exposing PETCTFusion module to build

Revision 10649 - Directory Listing
Modified Wed Oct 14 21:26:54 2009 UTC (8 years ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding new module for viewing PET and CT images and computing Standardized Uptake Value (SUV)

Revision 10646 - Directory Listing
Modified Wed Oct 14 20:28:32 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect orientation matrix during image saving


Revision 10645 - Directory Listing
Modified Wed Oct 14 19:52:17 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
BUG: DefineSuperSampleSize must be independent of the MRML node


Revision 10644 - Directory Listing
Modified Wed Oct 14 18:43:00 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
BUGFIX: cropping disabled by default
BUGFIX: when choosing a preset, transfer funtions will not left hung or right hung

Revision 10643 - Directory Listing
Modified Wed Oct 14 18:20:11 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
ENH: filling in new functionality, no backwards compatibility


Revision 10640 - Directory Listing
Modified Wed Oct 14 17:10:04 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
ENH: initial commit for the command line module to reflect the updated
workflow; this one is just a copy of the original CL module


Revision 10639 - Directory Listing
Modified Wed Oct 14 17:04:17 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect commit


Revision 10638 - Directory Listing
Modified Wed Oct 14 17:00:45 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
ENH: command line module to reflect the updated workflow


Revision 10632 - Directory Listing
Modified Tue Oct 13 21:12:10 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
STYLE: cleaning up the frames a little

Revision 10629 - Directory Listing
Modified Tue Oct 13 18:09:23 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
ENH: adding code for when can change the distance annotation text colour on the VTK level, change colour button not packed

Revision 10626 - Directory Listing
Modified Fri Oct 9 22:06:15 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
BUG: fixed how was watching for and processing events, took out unused vars and methods

Revision 10625 - Directory Listing
Modified Fri Oct 9 19:32:12 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new GUI and architecture

Revision 10621 - Directory Listing
Modified Fri Oct 9 16:34:29 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: turn off volume rendering 1 as it has been merged into volume rendering module

Revision 10620 - Directory Listing
Modified Fri Oct 9 16:33:00 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new GUI and architecture

Revision 10619 - Directory Listing
Modified Fri Oct 9 16:31:23 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new GUI and architecture

Revision 10617 - Directory Listing
Modified Fri Oct 9 16:16:51 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new GUI and architecture

Revision 10612 - Directory Listing
Modified Thu Oct 8 22:14:01 2009 UTC (8 years ago) by jcfr
Original Path: trunk/Modules
ENH: The directory BASE/GUI/Qt is now excluded from the build process. For now, the code is left there for reference purposes. Note: Doing so removed most of the detected memory leaks.

Revision 10611 - Directory Listing
Modified Thu Oct 8 22:12:14 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
ENH: allow constraining ruler end points to slice planes

Revision 10610 - Directory Listing
Modified Thu Oct 8 22:11:52 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
STYLE: update the help text

Revision 10608 - Directory Listing
Modified Thu Oct 8 20:31:08 2009 UTC (8 years ago) by pieper
Original Path: trunk/Modules
COMP: warning fixes

Revision 10605 - Directory Listing
Modified Thu Oct 8 19:32:45 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new GUI and architecture

Revision 10604 - Directory Listing
Modified Thu Oct 8 19:14:52 2009 UTC (8 years ago) by hliu
Original Path: trunk/Modules
BUG: fixed a bug in getting image coordinates from Coronal slice view.

Revision 10603 - Directory Listing
Modified Thu Oct 8 19:08:53 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new GUI and architecture

Revision 10602 - Directory Listing
Modified Thu Oct 8 18:50:15 2009 UTC (8 years ago) by hliu
Original Path: trunk/Modules
ENH: continued development.

Revision 10601 - Directory Listing
Modified Thu Oct 8 18:35:47 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new GUI and architecture

Revision 10600 - Directory Listing
Modified Thu Oct 8 18:30:49 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
ENH: allow child classes for constraining ruler ends, so can put them on fibre bundles

Revision 10599 - Directory Listing
Modified Thu Oct 8 17:47:03 2009 UTC (8 years ago) by tokuda
Original Path: trunk/Modules
ENH: InvokeEvent() calls have been moved from connector threads to the main thread. (By Andras)

Revision 10597 - Directory Listing
Modified Thu Oct 8 14:37:17 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new GUI and architecture

Revision 10596 - Directory Listing
Modified Wed Oct 7 21:28:00 2009 UTC (8 years ago) by pieper
Original Path: trunk/Modules
BUG: update test to match new API

Revision 10594 - Directory Listing
Modified Wed Oct 7 20:08:36 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
ENH: all rulers visible/invisible. Fixed responding to transform modified and modified events if not the active node

Revision 10592 - Directory Listing
Modified Wed Oct 7 19:28:34 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new GUI and architecture

Revision 10591 - Directory Listing
Modified Wed Oct 7 18:08:07 2009 UTC (8 years ago) by pieper
Original Path: trunk/Modules
ENH: new rendering code from Yanling

Revision 10590 - Directory Listing
Modified Wed Oct 7 16:15:24 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new architecture

Revision 10589 - Directory Listing
Modified Wed Oct 7 16:00:37 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new architecture

Revision 10588 - Directory Listing
Modified Wed Oct 7 16:00:30 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new architecture

Revision 10587 - Directory Listing
Modified Wed Oct 7 16:00:23 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new architecture

Revision 10586 - Directory Listing
Modified Wed Oct 7 15:58:24 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new architecture

Revision 10585 - Directory Listing
Modified Wed Oct 7 15:58:17 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new architecture

Revision 10584 - Directory Listing
Modified Wed Oct 7 15:57:14 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new architecture

Revision 10583 - Directory Listing
Modified Wed Oct 7 15:56:36 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new architecture

Revision 10577 - Directory Listing
Modified Mon Oct 5 21:37:20 2009 UTC (8 years ago) by tokuda
Original Path: trunk/Modules
STYLE: removing debug code

Revision 10576 - Directory Listing
Modified Mon Oct 5 21:19:02 2009 UTC (8 years ago) by tokuda
Original Path: trunk/Modules
ENH: user interface to enable/disable CRC check

Revision 10574 - Directory Listing
Modified Mon Oct 5 19:48:56 2009 UTC (8 years ago) by pieper
Original Path: trunk/Modules
BUG: avoid crashes due to incompletely initialized volumes (e.g. when loading a scene that points to invalid files)

Revision 10571 - Directory Listing
Modified Fri Oct 2 20:30:25 2009 UTC (8 years ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering module: hooked up ROI

Revision 10570 - Directory Listing
Modified Fri Oct 2 20:21:56 2009 UTC (8 years ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering module: hooked up ROI

Revision 10568 - Directory Listing
Modified Fri Oct 2 19:36:24 2009 UTC (8 years ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering module: hooked up ROI

Revision 10566 - Directory Listing
Modified Fri Oct 2 15:09:11 2009 UTC (8 years ago) by lorensen
Original Path: trunk/Modules
BUG: Logic for suppressing welcome screen was inverted.

Revision 10564 - Directory Listing
Modified Thu Oct 1 22:27:47 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
BUG: error checking to avoid seg faults when load a scene with a model, volume, and ruler node

Revision 10562 - Directory Listing
Modified Thu Oct 1 20:42:30 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
ENH: make the ruler node transformable and respond to transform modified events by updating the widget in 3d.

Revision 10561 - Directory Listing
Modified Thu Oct 1 20:07:23 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
COMP: took out duplicate include

Revision 10553 - Directory Listing
Modified Thu Oct 1 15:53:31 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
BUG: init vars to avoid seg fault on calling constructor

Revision 10551 - Directory Listing
Modified Wed Sep 30 21:14:33 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
BUG: merging fix from the 3-4 branch; increment on invalid iterator value
caused segfault


Revision 10544 - Directory Listing
Modified Tue Sep 29 19:56:48 2009 UTC (8 years ago) by pieper
Original Path: trunk/Modules
COMP: re-enable ROI select

Revision 10543 - Directory Listing
Modified Tue Sep 29 17:40:24 2009 UTC (8 years ago) by alexy
Original Path: trunk/Modules
ENH: workaround asser() for non unsigned data type.

Revision 10542 - Directory Listing
Modified Tue Sep 29 16:21:05 2009 UTC (8 years ago) by alexy
Original Path: trunk/Modules
ENH: workaround asser() for non unsigned data type.

Revision 10541 - Directory Listing
Modified Tue Sep 29 15:44:28 2009 UTC (8 years ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering module: renamed parameters node to avoid name conflict with VolumeRendering

Revision 10540 - Directory Listing
Modified Tue Sep 29 15:42:55 2009 UTC (8 years ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering module: renamed parameters node to avoid name conflict with VolumeRendering

Revision 10537 - Directory Listing
Modified Tue Sep 29 00:41:33 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: new architecture

Revision 10536 - Directory Listing
Modified Mon Sep 28 20:51:03 2009 UTC (8 years ago) by pieper
Original Path: trunk/Modules
ENH: per request from Ankako (mantis 647)

Revision 10532 - Directory Listing
Modified Mon Sep 28 14:54:06 2009 UTC (8 years ago) by pieper
Original Path: trunk/Modules
BUG: remove declaration of unimplemented method

Revision 10531 - Directory Listing
Modified Sat Sep 26 18:24:20 2009 UTC (8 years ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering module: added VolumeProperty GUI

Revision 10530 - Directory Listing
Modified Fri Sep 25 18:16:08 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
BUG: update the GUI with the model nodes constraining the ruler ends as defined in the ruler node.

Revision 10529 - Directory Listing
Modified Fri Sep 25 16:21:18 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
BUG: check to make sure that there's a prop associated with this model (prevent crash on scene load). TODO: get the constraint updated once the scene is loaded

Revision 10528 - Directory Listing
Modified Fri Sep 25 14:59:03 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
STYLE: adjusted name of the segmentated volume


Revision 10527 - Directory Listing
Modified Thu Sep 24 22:13:20 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
BUG: fix the problem with non-invertible inverse field at the expense of
double evaluation of demons. The jacobian metric should now be more
consistent with the segmentation metric.


Revision 10526 - Directory Listing
Modified Thu Sep 24 19:38:30 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
BUG: just remove observers, gets rid of crash on exit. Removed compiler warnings

Revision 10525 - Directory Listing
Modified Wed Sep 23 18:16:16 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
ENH: show multiple ruler widgets at the same time in the 3d view. Seems to work on scene open and close.

Revision 10524 - Directory Listing
Modified Wed Sep 23 18:11:14 2009 UTC (8 years ago) by naucoin
Original Path: trunk/Modules
BUG: clean up pointers better in destructor, making sure that when call Delete the 3d view is emptied

Revision 10523 - Directory Listing
Modified Wed Sep 23 16:26:47 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: better scene save/load behavior

Revision 10522 - Directory Listing
Modified Wed Sep 23 16:21:19 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: moving toward new structure (stage I, cleaning up, bug fix...)
ENH: better scene save/load behavior

Revision 10521 - Directory Listing
Modified Wed Sep 23 16:14:54 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: moving toward new structure (stage I, cleaning up, bug fix...)
ENH: better scene save/load behavior

Revision 10520 - Directory Listing
Modified Wed Sep 23 16:13:33 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: moving toward new structure (stage I, cleaning up, bug fix...)
ENH: better scene save/load behavior

Revision 10519 - Directory Listing
Modified Wed Sep 23 16:11:02 2009 UTC (8 years ago) by vrnova
Original Path: trunk/Modules
ENH: moving toward new structure (stage I, cleaning up, bug fix...)
ENH: better scene save/load behavior

Revision 10517 - Directory Listing
Modified Tue Sep 22 23:42:08 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect opacity function for volume rendering; still not functioning as
expected. Workaround: select segmentation manually in step node selector, then
select "None".


Revision 10516 - Directory Listing
Modified Tue Sep 22 16:57:25 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
ENH: save jacobian image


Revision 10508 - Directory Listing
Modified Mon Sep 21 16:58:48 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
ENH: island removal for externally defined volumes


Revision 10507 - Directory Listing
Modified Mon Sep 21 16:30:20 2009 UTC (8 years ago) by fedorov
Original Path: trunk/Modules
BUG: use nn interpolator for deformable metric


Revision 10505 - Directory Listing
Modified Sun Sep 20 22:42:53 2009 UTC (8 years ago) by pieper
Original Path: trunk/Modules
BUG: typo that would cause use of unitialized variable

Revision 10502 - Directory Listing
Modified Fri Sep 18 18:47:30 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk/Modules
ENH: added AddExcludedChildClass to node selector and excluded vtkMRMLDiffusionTensorDisplayPropertiesNode from all color map selectors

Revision 10500 - Directory Listing
Modified Fri Sep 18 17:01:00 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk/Modules
ENH: improved performance of multi fiber loading by compressing NodeAddedEvent

Revision 10496 - Directory Listing
Modified Fri Sep 18 15:03:53 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering module

Revision 10493 - Directory Listing
Modified Thu Sep 17 20:53:41 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk/Modules
ENH: move all the vtk widget classes into a separate class so that can encapsulate the variables needed to display more than one ruler in the scene at once

Revision 10492 - Directory Listing
Modified Thu Sep 17 20:51:07 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk/Modules
COMP: take out include of point placer, it's in the ruler widget now

Revision 10491 - Directory Listing
Modified Thu Sep 17 20:50:08 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk/Modules
BUG: fixing typo, print out correct model id

Revision 10489 - Directory Listing
Modified Thu Sep 17 19:58:25 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk/Modules
BUG: remove memory leak

Revision 10488 - Directory Listing
Modified Thu Sep 17 19:43:34 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk/Modules
BUG: removing memory leaks

Revision 10486 - Directory Listing
Modified Thu Sep 17 18:10:15 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk/Modules
BUGFIX: fixed logic hole bypassing transfer function loading

Revision 10485 - Directory Listing
Modified Thu Sep 17 03:05:52 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk/Modules
ENH: expose all the parameters of the MRI Bias Field Correction filter. As pointed out by Andriy Fedorov, some parameters that were previously hidden need to be adjusted in order to get the best correction. These parameters will be displayed in a separate tab for advanced settings.

Revision 10484 - Directory Listing
Modified Wed Sep 16 21:59:52 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
BUG: Removing debug outputs.

Revision 10483 - Directory Listing
Modified Wed Sep 16 21:16:09 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
BUG: missing space


Revision 10474 - Directory Listing
Modified Mon Sep 14 20:18:14 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk/Modules
BUGFIX: removed duplicated selection node

Revision 10468 - Directory Listing
Modified Sat Sep 12 17:35:11 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk/Modules
BUG: re-add file with corrected capitalization

Revision 10467 - Directory Listing
Modified Sat Sep 12 17:33:55 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk/Modules
BUG: remove file with wrong capitalization

Revision 10465 - Directory Listing
Modified Fri Sep 11 21:06:22 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk/Modules
ENH: added BuildGUIForTrackerFrame().

Revision 10463 - Directory Listing
Modified Fri Sep 11 19:30:15 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 10460 - Directory Listing
Modified Fri Sep 11 17:03:25 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk/Modules
ENH: Qt GAD module

Revision 10459 - Directory Listing
Modified Fri Sep 11 16:53:35 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk/Modules
ENH: Qt GAD module

Revision 10457 - Directory Listing
Modified Fri Sep 11 14:17:54 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
ENH: crosshair mode initialized


Revision 10455 - Directory Listing
Modified Thu Sep 10 19:19:03 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
STYLE: Connect() returns non-0 even if there's no error! Check error
code instead of return value.


Revision 10454 - Directory Listing
Modified Thu Sep 10 19:04:31 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
ENH: changes to GUI to improve usability (Ron's suggestion)


Revision 10448 - Directory Listing
Modified Thu Sep 10 18:27:37 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk/Modules
STYLE: remove dead code

Revision 10447 - Directory Listing
Modified Thu Sep 10 18:26:12 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk/Modules
ENH: set master window for dialog

Revision 10446 - Directory Listing
Modified Thu Sep 10 18:25:14 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk/Modules
ENH: add normals so rendering is correct

Revision 10444 - Directory Listing
Modified Thu Sep 10 18:11:49 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
STYLE: get rid of warnings


Revision 10443 - Directory Listing
Modified Thu Sep 10 18:11:33 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk/Modules
COMP: apply patches from Attila Nagy for Solaris builds

Revision 10430 - Directory Listing
Modified Wed Sep 9 17:50:11 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
ENH: cleanup of ROI selection to avoid inconsistencies due to
conflicting updates, and to improve performance


Revision 10426 - Directory Listing
Modified Tue Sep 8 20:52:14 2009 UTC (8 years, 1 month ago) by hjohnson
Original Path: trunk/Modules
COMP: With the conversion to CMake version 2.6, the variables CMAKE_RUNTIME_OUTPUT_DIRECTORY CMAKE_LIBRARY_OUTPUT_DIRECTORY CMAKE_ARCHIVE_OUTPUT_DIRECTORY should be used instead of EXECUTABLE_OUTPUT_PATH and LIBRARY_OUTPUT_PATH.

Revision 10425 - Directory Listing
Modified Tue Sep 8 20:49:39 2009 UTC (8 years, 1 month ago) by hjohnson
Original Path: trunk/Modules
ENH:  Updated to include new version of python, and BatchMake for building on new version gcc compilers on Mac Snow Leopard.

Revision 10417 - Directory Listing
Modified Fri Sep 4 22:17:08 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk/Modules
BUG: include the windows header

Revision 10416 - Directory Listing
Modified Fri Sep 4 22:09:15 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk/Modules
BUG: fix export for windows

Revision 10415 - Directory Listing
Modified Fri Sep 4 21:58:20 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk/Modules
ENH: first pass at making a ruler node, save to scene and undo work. Next step: make more than one 3d widget. Split out the ruler into it's own widget as well.

Revision 10411 - Directory Listing
Modified Thu Sep 3 15:09:13 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
STYLE: remove debugging output


Revision 10410 - Directory Listing
Modified Thu Sep 3 14:29:48 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
BUG: bg/fg volumes were reset by PropagateVolumeSelection. renderVolume was
deleted, but not set to "", causing runtime error.


Revision 10409 - Directory Listing
Modified Wed Sep 2 04:28:18 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
ENH: add mask selector for parameter map.

Revision 10408 - Directory Listing
Modified Wed Sep 2 01:13:33 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk/Modules
ENH: Qt GAD module

Revision 10407 - Directory Listing
Modified Tue Sep 1 21:19:09 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk/Modules
ENH: Qt GAD module

Revision 10406 - Directory Listing
Modified Tue Sep 1 18:46:20 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk/Modules
STYLE: cleaned up code.

Revision 10405 - Directory Listing
Modified Mon Aug 31 21:59:05 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
ENH: integrating curve save buttons. (The button to save fitted curve has been removed.)

Revision 10404 - Directory Listing
Modified Mon Aug 31 20:12:50 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
BUG: fixing segmentation fault on selecting target curve.

Revision 10400 - Directory Listing
Modified Mon Aug 31 18:39:38 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk/Modules
ENH: GPU ray cast shading model updated

Revision 10399 - Directory Listing
Modified Mon Aug 31 16:57:57 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk/Modules
BUG: used VTK_PatientToImageRegistration_EXPORT instead of VTK_PATIENTTOIMAGEREGISTRATION_EXPORT.

Revision 10397 - Directory Listing
Modified Mon Aug 31 16:41:43 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk/Modules
ENH: added module PatientToImageRegistration.

Revision 10396 - Directory Listing
Modified Mon Aug 31 12:05:04 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
BUG: fixing problem that target curve menu doesn't update.

Revision 10395 - Directory Listing
Modified Sun Aug 30 02:30:57 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
ENH: SelectAllPlots() and DeselectAllPlots() have been implemented.

Revision 10394 - Directory Listing
Modified Sat Aug 29 02:09:27 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
STYLE: clean-up vtkFourDAnalysisGUI.cxx/h 

Revision 10393 - Directory Listing
Modified Fri Aug 28 23:40:26 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
ENH: improving performance of ROI selection step


Revision 10392 - Directory Listing
Modified Fri Aug 28 22:50:02 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
ENH: improve performance -- PropagateVolumeSelection is a very expensive way
to set up composite nodes!


Revision 10387 - Directory Listing
Modified Fri Aug 28 20:56:32 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
ENH: add popup menu in the initial parameter list to select plot nodes.

Revision 10385 - Directory Listing
Modified Fri Aug 28 19:37:27 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk/Modules
ENH: Illustrative context preserving exploration

Revision 10384 - Directory Listing
Modified Fri Aug 28 14:39:49 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect reference image for scan2 resampling


Revision 10383 - Directory Listing
Modified Thu Aug 27 22:52:02 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
ENH: adding a button to import array (curve) data.

Revision 10382 - Directory Listing
Modified Thu Aug 27 22:40:12 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
ENH: fixing memory leak

Revision 10381 - Directory Listing
Modified Thu Aug 27 22:33:07 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
BUG: somehow, resampling results end up under transform


Revision 10380 - Directory Listing
Modified Thu Aug 27 22:05:26 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
ENH: adding a button to import array (curve) data.

Revision 10378 - Directory Listing
Modified Thu Aug 27 21:41:02 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk/Modules
ENH: improved leak testingg script

Revision 10377 - Directory Listing
Modified Thu Aug 27 20:53:44 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
ENH: non axis-aligned check will now cause warning, not error.


Revision 10373 - Directory Listing
Modified Thu Aug 27 18:16:53 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk/Modules
BUG: avoid name clash with Windows GetYValue macro

Revision 10371 - Directory Listing
Modified Thu Aug 27 18:11:27 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk/Modules
BUG: handle changes to the text entries

Revision 10370 - Directory Listing
Modified Thu Aug 27 13:53:22 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
ENH: fixing python codes in vtkCurveAnalysisPythonInterface.cxx to get default constant values

Revision 10369 - Directory Listing
Modified Thu Aug 27 04:56:45 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk/Modules
BUG: disable three tests temporarily. will be fixed when I am back from Belgium.

Revision 10368 - Directory Listing
Modified Wed Aug 26 21:15:01 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk/Modules
BUG: fix warnings with unused variables. STYLE: remove dead code. comply with VTK standards

Revision 10367 - Directory Listing
Modified Wed Aug 26 20:52:54 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixing bug in reading Timepoints out of volume bundles

Revision 10366 - Directory Listing
Modified Wed Aug 26 20:34:17 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixed some null pointer stuff, fixed mrml node saving/reading and timestamp serialization

Revision 10365 - Directory Listing
Modified Wed Aug 26 19:48:03 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk/Modules
ENH: get the window level presets from the display node and let the user select them

Revision 10354 - Directory Listing
Modified Wed Aug 26 15:19:48 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: created method that uses DICOM Temporal Position information header info, if available, to load bundles -- otherwise, sorts by slice location.

Revision 10353 - Directory Listing
Modified Wed Aug 26 13:17:08 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixing win32 compile errors

Revision 10349 - Directory Listing
Modified Tue Aug 25 20:00:34 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk/Modules
ENH: gradient magnitude opacity modulation in GPU ray cast

Revision 10345 - Directory Listing
Modified Tue Aug 25 14:55:27 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk/Modules
ENH: update ray ending calculation algorithm

Revision 10344 - Directory Listing
Modified Mon Aug 24 22:43:49 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
ENH: added error if the input image is not axis-aligned, will not proceed
with resampling for such images


Revision 10343 - Directory Listing
Modified Mon Aug 24 21:58:53 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
ENH: added functionality to reduce ROI with mouse clicks inside the region


Revision 10342 - Directory Listing
Modified Mon Aug 24 18:46:26 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
BUG: fixing problem: updating plot list after deleting plot nodes

Revision 10341 - Directory Listing
Modified Mon Aug 24 18:38:15 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding new method; commented out until Junichi can test on his data

Revision 10338 - Directory Listing
Modified Mon Aug 24 13:40:42 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk/Modules
ENH: removed puts


Revision 10337 - Directory Listing
Modified Mon Aug 24 12:17:58 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk/Modules
BUG: add missing ack

Revision 10336 - Directory Listing
Modified Mon Aug 24 12:16:31 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk/Modules
BUG: add missing link to documentation

Revision 10332 - Directory Listing
Modified Sat Aug 22 01:28:21 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
BUG: fixed errors caused by plot nodes.

Revision 10327 - Directory Listing
Modified Fri Aug 21 21:12:09 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk/Modules
BUG: tests were failing because of the vtkTeem library included in Slicer3_Libs_LIBRARIES

Revision 10326 - Directory Listing
Modified Fri Aug 21 16:33:37 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
ENH: access methods for Python

Revision 10324 - Directory Listing
Modified Fri Aug 21 15:00:53 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
ENH: adding setter/getter of time stamps for Python.

Revision 10323 - Directory Listing
Modified Fri Aug 21 00:49:03 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk/Modules
ENH: New plotting class + plotting MRML nodes

Revision 10322 - Directory Listing
Modified Thu Aug 20 21:38:31 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: fix memory leak

Revision 10321 - Directory Listing
Modified Thu Aug 20 21:21:03 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: fix memory leak

Revision 10320 - Directory Listing
Modified Thu Aug 20 21:20:21 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: remove unused code

Revision 10319 - Directory Listing
Modified Thu Aug 20 20:53:39 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
ENH: make the leak test more complete by renaming shared libraries (so they are never even loaded, not just ignored)

Revision 10313 - Directory Listing
Modified Wed Aug 19 19:54:10 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding GPU ray cast II

Revision 10312 - Directory Listing
Modified Wed Aug 19 19:27:06 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
STYLE: removing debugging codes

Revision 10310 - Directory Listing
Modified Wed Aug 19 18:34:25 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk/Modules
COMP: correcting typo in set call

Revision 10308 - Directory Listing
Modified Wed Aug 19 16:31:07 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: added error handling for remote scene downloading


Revision 10307 - Directory Listing
Modified Wed Aug 19 16:14:34 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: added the functionality to load tutorial data with one button click!
(Steve gets credit for this great idea!)


Revision 10306 - Directory Listing
Modified Wed Aug 19 15:13:56 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: added warning/info message about limitations of the implementation


Revision 10299 - Directory Listing
Modified Tue Aug 18 20:31:47 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: separate transfer funcs for 2nd volume

Revision 10290 - Directory Listing
Modified Tue Aug 18 15:59:12 2009 UTC (8 years, 2 months ago) by hliu
Original Path: trunk/Modules
ENH: made OpenCV compile with opencv library 1.0.

Revision 10289 - Directory Listing
Modified Tue Aug 18 15:57:35 2009 UTC (8 years, 2 months ago) by hliu
Original Path: trunk/Modules
ENH: moved OpenCV module into IGT category.

Revision 10288 - Directory Listing
Modified Tue Aug 18 15:46:38 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk/Modules
COMP: need vtkIdType for args to GetIncrements

Revision 10285 - Directory Listing
Modified Tue Aug 18 09:36:18 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: use of unsigned short pointer instead of float pointer

Revision 10284 - Directory Listing
Modified Tue Aug 18 09:33:42 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: preview computation did not execute correctly because of wrong extent

Revision 10283 - Directory Listing
Modified Tue Aug 18 01:30:01 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: run button did not trigger the segmentation

Revision 10282 - Directory Listing
Modified Tue Aug 18 01:29:21 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: image indices were outside of image extent

Revision 10281 - Directory Listing
Modified Tue Aug 18 00:36:39 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: improve the visualization of the gaussian distribution. treat the case of the distributions of the same image in X and Y

Revision 10280 - Directory Listing
Modified Tue Aug 18 00:18:28 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: improve the help and about section with usage instructions and a link to the documentation

Revision 10279 - Directory Listing
Modified Mon Aug 17 23:39:52 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: set default parameter values to optimum values found during experiments on MRI data

Revision 10278 - Directory Listing
Modified Mon Aug 17 22:40:12 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: revert to commit of the MRI Bias Field Correction and fix the crash when clicking on Apply. set default parameter values to optimum. Remove unnecessary sliders from user interface as these parameters do not need to be modified anymore.

Revision 10277 - Directory Listing
Modified Mon Aug 17 19:59:39 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: revert to revision 9752. first version committed at the end of the NA-MIC Week. fix error that was reported with the HEAD version

Revision 10276 - Directory Listing
Modified Mon Aug 17 16:27:22 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: build and run new segmentation parameters failed. note that new test has been renamed

Revision 10275 - Directory Listing
Modified Mon Aug 17 15:43:01 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: remove renamed test. test name had a typo

Revision 10274 - Directory Listing
Modified Mon Aug 17 15:41:55 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: rename test new segmentation parameters. typo in test name

Revision 10273 - Directory Listing
Modified Mon Aug 17 15:35:35 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: preprocessing manager test was failing

Revision 10271 - Directory Listing
Modified Mon Aug 17 13:30:35 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
BUG: adding a line to check a pointer in the node list

Revision 10267 - Directory Listing
Modified Sun Aug 16 16:14:50 2009 UTC (8 years, 2 months ago) by domibel
Original Path: trunk/Modules
ENH: Version numbering for shared libraries

Revision 10266 - Directory Listing
Modified Sat Aug 15 22:45:05 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: coding vtkSlicerXYPlotWidget class 

Revision 10262 - Directory Listing
Modified Fri Aug 14 21:03:35 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: adding new MRML nodes and plotting widget

Revision 10261 - Directory Listing
Modified Fri Aug 14 20:42:02 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: last major missing piece in logic for handling externally defined segmentation; hide volume rendering when leaving the module


Revision 10258 - Directory Listing
Modified Fri Aug 14 19:23:27 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: computation of scalar range per image. swapping position of objects in show user interface

Revision 10257 - Directory Listing
Modified Fri Aug 14 18:26:12 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk/Modules
BUG: check for supported data types before calling GetAdjustedScalarRange as it can crash out on an assert

Revision 10256 - Directory Listing
Modified Fri Aug 14 18:04:19 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
COMP: fix include dependency order

Revision 10254 - Directory Listing
Modified Fri Aug 14 17:31:57 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: mean was offset by one

Revision 10253 - Directory Listing
Modified Fri Aug 14 17:06:14 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid memory leak

Revision 10252 - Directory Listing
Modified Fri Aug 14 16:59:48 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid crash on exit

Revision 10251 - Directory Listing
Modified Fri Aug 14 16:55:45 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: change image resolution

Revision 10250 - Directory Listing
Modified Fri Aug 14 16:53:26 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: remove code used for debug

Revision 10249 - Directory Listing
Modified Fri Aug 14 16:25:22 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: normalize the intensity distributions

Revision 10248 - Directory Listing
Modified Fri Aug 14 16:07:52 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: hopefully, most of the logic to handle externally defined segmentations


Revision 10246 - Directory Listing
Modified Fri Aug 14 15:28:04 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding GPU ray cast II (new GUI)

Revision 10245 - Directory Listing
Modified Fri Aug 14 14:38:35 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding GPU ray cast II (new GUI)

Revision 10244 - Directory Listing
Modified Fri Aug 14 06:28:22 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: normalize scalar range of gaussian distributions

Revision 10243 - Directory Listing
Modified Fri Aug 14 06:18:42 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: enable label map sampling. deprecate sampling and manual sampling

Revision 10242 - Directory Listing
Modified Fri Aug 14 04:35:08 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
BUG: fixing bug that nodes are not removed from IO tree. Also some unused methos have been removed from the connector class.

Revision 10241 - Directory Listing
Modified Thu Aug 13 20:20:21 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
BUG: MINIP shader program and pointer init problem

Revision 10239 - Directory Listing
Modified Thu Aug 13 14:28:46 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk/Modules
COMP: 5.2 to 5.4 deprecated methods

Revision 10237 - Directory Listing
Modified Thu Aug 13 02:31:22 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
STYLE: deleting unnecessary methods and variables.

Revision 10236 - Directory Listing
Modified Thu Aug 13 01:30:38 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: reimplementing IGTL onnector as MRML node

Revision 10232 - Directory Listing
Modified Wed Aug 12 21:20:46 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: gui+mrml to handle externally defined segmentation


Revision 10229 - Directory Listing
Modified Wed Aug 12 20:07:25 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk/Modules
BUG: call the test with the parameter from the xml file

Revision 10225 - Directory Listing
Modified Wed Aug 12 17:44:51 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: finishing GPU ray cast II

Revision 10222 - Directory Listing
Modified Wed Aug 12 16:08:30 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: GPU ray casting II (multivolume rendering) works now

Revision 10221 - Directory Listing
Modified Wed Aug 12 14:36:33 2009 UTC (8 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding some error checking

Revision 10219 - Directory Listing
Modified Tue Aug 11 21:08:38 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: replace label menu with node selector.

Revision 10218 - Directory Listing
Modified Tue Aug 11 20:51:35 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
BUG: wrong choice for the default ResampleChoice value


Revision 10217 - Directory Listing
Modified Tue Aug 11 20:38:00 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
BUG: changes in the procedure for determining the voxel size for supersampled
volume were not propagated to the command line module


Revision 10216 - Directory Listing
Modified Tue Aug 11 19:32:03 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding GPU volume rendering II

Revision 10215 - Directory Listing
Modified Tue Aug 11 18:50:34 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: resampling direction was not updated

Revision 10214 - Directory Listing
Modified Tue Aug 11 18:47:33 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix variable name in debug information

Revision 10213 - Directory Listing
Modified Tue Aug 11 18:45:26 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: result of slider goes from 0 to 1. The cast to int resulted in 0. ENH: set slider resolution to 1.0/64.0

Revision 10211 - Directory Listing
Modified Tue Aug 11 14:02:01 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: fiducial view changes per Ron's request, fixed RemoveViewProp error


Revision 10210 - Directory Listing
Modified Tue Aug 11 13:46:45 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: compilation error with SunCC because pointer to char must be const pointer to char. Reviewing the code revealed that the function containing this code is not called in EMSegment. Unused functions have thus be commented out.

Revision 10209 - Directory Listing
Modified Tue Aug 11 12:20:37 2009 UTC (8 years, 2 months ago) by lantiga
Original Path: trunk/Modules
ENH: the ICP surface registration module now optionally accepts initial transform and outputs the computed transform

Revision 10208 - Directory Listing
Modified Mon Aug 10 21:51:58 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: fixed leaks in modules

Revision 10207 - Directory Listing
Modified Mon Aug 10 18:36:21 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leaks in prostate nav module

Revision 10205 - Directory Listing
Modified Mon Aug 10 16:07:29 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
BUG: ChangeTracker is dependent on Volumes module, but the compiler fails 
to find the header in some cases. Placing Volumes before ChangeTracker in
CMakeLists seems to fix this problem.


Revision 10197 - Directory Listing
Modified Fri Aug 7 21:25:46 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
BUG: removing debug output

Revision 10196 - Directory Listing
Modified Fri Aug 7 21:24:43 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
STYLE: changing script names

Revision 10195 - Directory Listing
Modified Fri Aug 7 21:16:03 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: adding member variable to hold method name in Python curve fitting class

Revision 10188 - Directory Listing
Modified Fri Aug 7 20:14:00 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
STYLE: changing indent

Revision 10182 - Directory Listing
Modified Fri Aug 7 15:40:22 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix warning. conversion from double to int

Revision 10179 - Directory Listing
Modified Thu Aug 6 16:39:15 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
COMP: fix compile warnings

Revision 10178 - Directory Listing
Modified Thu Aug 6 16:37:44 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
BUG: removing fmin(), since it may not be compatible with win


Revision 10177 - Directory Listing
Modified Thu Aug 6 15:46:15 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
BUG: files left out of the previous commit by mistake


Revision 10176 - Directory Listing
Modified Thu Aug 6 15:01:04 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: gui+logic+mrml to handle ROI resampling options
BUG: removed assert to fix win compile problem


Revision 10175 - Directory Listing
Modified Wed Aug 5 22:36:27 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: functionality to disable ROI registration


Revision 10174 - Directory Listing
Modified Wed Aug 5 22:12:35 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: functionality to handle externally specified global transform and disabled
global registration


Revision 10172 - Directory Listing
Modified Wed Aug 5 14:44:21 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: conservative internal volume size limit

Revision 10171 - Directory Listing
Modified Wed Aug 5 14:03:27 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: GUI/MRML functionality to support registration choices


Revision 10169 - Directory Listing
Modified Tue Aug 4 20:57:03 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: adding the flexibility to disable/improve the automatic registration
step


Revision 10162 - Directory Listing
Modified Sat Aug 1 16:11:46 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10161 - Directory Listing
Modified Sat Aug 1 15:59:38 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10160 - Directory Listing
Modified Sat Aug 1 15:54:53 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10159 - Directory Listing
Modified Sat Aug 1 15:54:14 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10158 - Directory Listing
Modified Sat Aug 1 15:49:49 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10157 - Directory Listing
Modified Sat Aug 1 15:49:02 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10156 - Directory Listing
Modified Sat Aug 1 15:44:47 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10155 - Directory Listing
Modified Sat Aug 1 15:40:45 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10154 - Directory Listing
Modified Sat Aug 1 15:29:54 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10153 - Directory Listing
Modified Sat Aug 1 15:27:37 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10152 - Directory Listing
Modified Sat Aug 1 15:25:50 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10151 - Directory Listing
Modified Sat Aug 1 15:23:43 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10150 - Directory Listing
Modified Sat Aug 1 15:21:54 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10149 - Directory Listing
Modified Sat Aug 1 15:21:37 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10148 - Directory Listing
Modified Sat Aug 1 15:19:57 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10147 - Directory Listing
Modified Sat Aug 1 15:18:52 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10146 - Directory Listing
Modified Sat Aug 1 15:16:49 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10145 - Directory Listing
Modified Sat Aug 1 15:15:38 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10144 - Directory Listing
Modified Sat Aug 1 15:15:09 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10143 - Directory Listing
Modified Sat Aug 1 15:09:03 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10142 - Directory Listing
Modified Sat Aug 1 15:08:21 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10141 - Directory Listing
Modified Sat Aug 1 15:05:52 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10140 - Directory Listing
Modified Sat Aug 1 15:01:36 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10139 - Directory Listing
Modified Sat Aug 1 14:48:56 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10138 - Directory Listing
Modified Sat Aug 1 05:57:15 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: doc

Revision 10137 - Directory Listing
Modified Sat Aug 1 04:47:43 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: code cleaning

Revision 10136 - Directory Listing
Modified Sat Aug 1 04:45:50 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: code cleaning

Revision 10135 - Directory Listing
Modified Sat Aug 1 04:43:45 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: add analyze data script

Revision 10134 - Directory Listing
Modified Fri Jul 31 20:34:12 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering module

Revision 10131 - Directory Listing
Modified Fri Jul 31 17:03:08 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering module

Revision 10128 - Directory Listing
Modified Fri Jul 31 13:04:45 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: be explicit about the types for numerical calculations

Revision 10126 - Directory Listing
Modified Thu Jul 30 21:25:59 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: convert pointset to polydata. missing header files for log lookup table and warp scalar filter

Revision 10125 - Directory Listing
Modified Thu Jul 30 21:15:40 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: compute the logarithm of the number of occurences. ignore zero intensities. warp scalars into the geometry

Revision 10124 - Directory Listing
Modified Thu Jul 30 20:30:21 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: add a lookup table to improve the visualization of the 2D histogram

Revision 10123 - Directory Listing
Modified Thu Jul 30 19:33:19 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk/Modules
ENH: new Volume Rendering architecture

Revision 10117 - Directory Listing
Modified Thu Jul 30 15:43:03 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk/Modules
ENH: new Volume Rendering architecture

Revision 10116 - Directory Listing
Modified Thu Jul 30 12:04:18 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: add missing initializer in constructor

Revision 10115 - Directory Listing
Modified Thu Jul 30 11:49:51 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: fix windows compile issues (missing return values)

Revision 10111 - Directory Listing
Modified Wed Jul 29 23:57:16 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: implementing targeting step

Revision 10110 - Directory Listing
Modified Wed Jul 29 23:22:40 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: add a box widget for the mask creation.

Revision 10109 - Directory Listing
Modified Wed Jul 29 23:18:06 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: add a box widget for the mask creation.

Revision 10108 - Directory Listing
Modified Wed Jul 29 23:15:11 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: compute and render the 2D histogram of the registered images

Revision 10107 - Directory Listing
Modified Wed Jul 29 23:04:43 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: handle the case when output label image is already initialized


Revision 10106 - Directory Listing
Modified Wed Jul 29 23:04:24 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix the round() compilation error on Windows

Revision 10105 - Directory Listing
Modified Wed Jul 29 22:26:24 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
COMP: removing RobotNode and RobotDisplayNode from CMakeList.txt.

Revision 10104 - Directory Listing
Modified Wed Jul 29 22:12:04 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
BUG: reallocate threshold filter


Revision 10092 - Directory Listing
Modified Wed Jul 29 14:09:49 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: putting step numbers into the titles of wizard pages

Revision 10089 - Directory Listing
Modified Wed Jul 29 13:04:54 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering module

Revision 10088 - Directory Listing
Modified Wed Jul 29 02:10:38 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: add visualization feedback for run segmentation step

Revision 10087 - Directory Listing
Modified Wed Jul 29 01:51:18 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: add render widget for the run segmentation node step

Revision 10086 - Directory Listing
Modified Wed Jul 29 01:35:15 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: add axes for the rendering of the 2D gaussian distributions

Revision 10084 - Directory Listing
Modified Wed Jul 29 00:36:33 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix the WriteXML bug. Missing space at the beginning of line. vtkMRMLNode does not include a space at the end of the line. It's the responsibility of WriteXML functions in every module.

Revision 10082 - Directory Listing
Modified Tue Jul 28 21:48:42 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix the Windows compilation errors. replace multi-dimensional vectors with uni-dimensional vectors

Revision 10081 - Directory Listing
Modified Tue Jul 28 21:08:08 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering module

Revision 10080 - Directory Listing
Modified Tue Jul 28 20:26:20 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: deleting unnecessary files.

Revision 10070 - Directory Listing
Modified Tue Jul 28 18:05:01 2009 UTC (8 years, 2 months ago) by millerjv
Original Path: trunk/Modules
BUG: cleaned out old targets that kept current targets from building

Revision 10069 - Directory Listing
Modified Tue Jul 28 18:04:12 2009 UTC (8 years, 2 months ago) by millerjv
Original Path: trunk/Modules
BUG: cleaned out old targets that kept current targets from building

Revision 10061 - Directory Listing
Modified Tue Jul 28 15:56:56 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: handle case where class name is NULL to avoid error messages at startup

Revision 10058 - Directory Listing
Modified Tue Jul 28 13:58:47 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
COMP: fixing compile errors

Revision 10057 - Directory Listing
Modified Tue Jul 28 13:51:58 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: changing steps

Revision 10056 - Directory Listing
Modified Tue Jul 28 13:18:36 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: Changing color scheme.

Revision 10055 - Directory Listing
Modified Tue Jul 28 12:29:06 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: Step transitions are now managed by vtkMRMLProstateNavManagerNode.

Revision 10054 - Directory Listing
Modified Mon Jul 27 23:51:39 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix the rendering of 2D gaussian distributions

Revision 10053 - Directory Listing
Modified Mon Jul 27 22:45:29 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: show the histogram of the target image in step 5

Revision 10052 - Directory Listing
Modified Mon Jul 27 22:44:35 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix the WriteXML bug, remove the space that was added at the end of every line if the xml file

Revision 10050 - Directory Listing
Modified Mon Jul 27 19:26:54 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
BUG: fixing compile error

Revision 10049 - Directory Listing
Modified Mon Jul 27 19:08:25 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding GPU ray cast II (lighting)

Revision 10048 - Directory Listing
Modified Mon Jul 27 18:01:10 2009 UTC (8 years, 2 months ago) by maddah
Original Path: trunk/Modules
ENH: added the option to color fibers based on their cluster ID

Revision 10047 - Directory Listing
Modified Mon Jul 27 18:00:14 2009 UTC (8 years, 2 months ago) by maddah
Original Path: trunk/Modules
ENH: added the option to color fibers based on their cluster ID

Revision 10045 - Directory Listing
Modified Mon Jul 27 17:53:54 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: adding nodes for robot management

Revision 10041 - Directory Listing
Modified Mon Jul 27 16:15:38 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: chaging step names

Revision 10040 - Directory Listing
Modified Mon Jul 27 15:56:23 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: chaging step names

Revision 10039 - Directory Listing
Modified Mon Jul 27 15:56:16 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: chaging step names

Revision 10036 - Directory Listing
Modified Mon Jul 27 15:36:40 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: removing z-frame registration code from Calibration step class.

Revision 10035 - Directory Listing
Modified Mon Jul 27 14:46:50 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: adding robot registration classes.

Revision 10034 - Directory Listing
Modified Mon Jul 27 13:27:59 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: deleting classes for NaviTrack support.

Revision 10033 - Directory Listing
Modified Mon Jul 27 12:34:16 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: updates in the last experiment during Project Week

Revision 10032 - Directory Listing
Modified Sat Jul 25 19:06:15 2009 UTC (8 years, 2 months ago) by hliu
Original Path: trunk/Modules
STYLE: removed some message commands.

Revision 10031 - Directory Listing
Modified Sat Jul 25 18:58:36 2009 UTC (8 years, 2 months ago) by hliu
Original Path: trunk/Modules
BUG: linked to OpenCV libraries.

Revision 10029 - Directory Listing
Modified Sat Jul 25 05:20:10 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: compute the eigenvectors of the covariance matrix to display the gaussian distribution

Revision 10028 - Directory Listing
Modified Sat Jul 25 03:18:29 2009 UTC (8 years, 2 months ago) by hliu
Original Path: trunk/Modules
ENH: added OpenCV module.

Revision 10027 - Directory Listing
Modified Sat Jul 25 03:15:36 2009 UTC (8 years, 2 months ago) by hliu
Original Path: trunk/Modules
ENH: added OpenCV module.

Revision 10026 - Directory Listing
Modified Sat Jul 25 00:05:08 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: load a label map to accurately create the class distributions

Revision 10025 - Directory Listing
Modified Sat Jul 25 00:03:50 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: load a label map to accurately create the class distributions

Revision 10024 - Directory Listing
Modified Sat Jul 25 00:03:37 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: load a label map to accurately create the class distributions

Revision 10023 - Directory Listing
Modified Fri Jul 24 23:13:38 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk/Modules
ENH: itk classes to convert between vtk images and itk images

Revision 10021 - Directory Listing
Modified Fri Jul 24 19:58:17 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: cropping in GPU ray cast II

Revision 10020 - Directory Listing
Modified Fri Jul 24 19:32:24 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding GPU ray cast II

Revision 10017 - Directory Listing
Modified Fri Jul 24 15:49:39 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
BUG: fixed crash when selecting GPU ray casting II

Revision 10014 - Directory Listing
Modified Thu Jul 23 22:21:31 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: new Volume Rendering architecture

Revision 10012 - Directory Listing
Modified Thu Jul 23 20:36:18 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: missing method call - stubbing it out for now until the developer can fix it.

Revision 10011 - Directory Listing
Modified Thu Jul 23 19:27:27 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding GPU ray cast II (multi-volume rendering)

Revision 10009 - Directory Listing
Modified Thu Jul 23 17:37:07 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
BUG: Fixing problems related to MRML Scene events.

Revision 10007 - Directory Listing
Modified Wed Jul 22 19:41:36 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: preparing GUI for GPU ray cast II

Revision 10005 - Directory Listing
Modified Wed Jul 22 15:43:04 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding GPU ray cast II for multi-volume rendering (foreground, background, and labelmap)

Revision 10004 - Directory Listing
Modified Wed Jul 22 15:29:27 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding GPU ray cast II for multi-volume rendering (foreground, background, and labelmap)

Revision 10003 - Directory Listing
Modified Wed Jul 22 15:26:51 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: adding GPU ray cast II for multi-volume rendering (foreground, background, and labelmap)

Revision 9998 - Directory Listing
Modified Wed Jul 22 03:23:12 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: minor fixes

Revision 9997 - Directory Listing
Modified Wed Jul 22 03:20:03 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk/Modules
ENH: minor fixes

Revision 9996 - Directory Listing
Modified Wed Jul 22 00:26:25 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk/Modules
ENH: adding menu button to specify file order in manual loading mode

Revision 9995 - Directory Listing
Modified Tue Jul 21 18:43:32 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk/Modules
BUG: fix crash on exit due to uninitialized variable

Revision 9993 - Directory Listing
Modified Tue Jul 21 17:15:38 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: upgraded tooltip string

Revision 9992 - Directory Listing
Modified Tue Jul 21 17:05:50 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: allow GPU ray cast to fully utilize high-end GPU

Revision 9991 - Directory Listing
Modified Tue Jul 21 16:55:40 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk/Modules
ENH: restructured rendering enabled, degenerate (?) cases not handled by the
algorithm may still cause troubles


Revision 9990 - Directory Listing
Modified Tue Jul 21 16:15:53 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk/Modules
ENH: stablize opengl texture mapper framerate adjustment algorithm

Revision 9988 - Directory Listing
Modified Tue Jul 21 14:26:37 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: allow Opengl texture mapper to hold larger volume. The GPU memory size option controls both GPU ray casting and Opengl texture mapper now.

Revision 9987 - Directory Listing
Modified Tue Jul 21 06:18:47 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: create the mesh for the moving image using tetrahedralization. STYLE: comply with VTK standards.

Revision 9986 - Directory Listing
Modified Tue Jul 21 05:32:45 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk/Modules
ENH: minor fixed

Revision 9985 - Directory Listing
Modified Tue Jul 21 04:52:02 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: remove debug comments to the standard output

Revision 9984 - Directory Listing
Modified Tue Jul 21 04:48:04 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
BUG: remove duplicate declaration

Revision 9983 - Directory Listing
Modified Tue Jul 21 04:20:12 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk/Modules
ENH: minor fixed

Revision 9982 - Directory Listing
Modified Tue Jul 21 03:41:10 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: module to create a statistical atlas. This module complements the EMSegment module. It creates a statistical atlas using a set of pre-segmented label maps. This is a generic module not restricted to brain datasets.

Revision 9981 - Directory Listing
Modified Tue Jul 21 03:39:39 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk/Modules
ENH: minor fixed

Revision 9980 - Directory Listing
Modified Tue Jul 21 03:35:35 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk/Modules
ENH: minor fixed

Revision 9979 - Directory Listing
Modified Tue Jul 21 03:15:10 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk/Modules
ENH: minor fixed

Revision 9978 - Directory Listing
Modified Tue Jul 21 01:37:54 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: add preview window in the left panel. add mask creation from the input image: the user selects a threshold using a slider and the mask is created and rendered in real-time in the preview window.

Revision 9976 - Directory Listing
Modified Mon Jul 20 20:35:54 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: adding manual mode for image loading

Revision 9974 - Directory Listing
Modified Mon Jul 20 19:23:18 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk/Modules
STYLE: merge style fixes from 3.4 release branch

Revision 9965 - Directory Listing
Modified Mon Jul 20 03:21:20 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
COMP: Deleting vtkIGTLConnector class

Revision 9964 - Directory Listing
Modified Mon Jul 20 03:12:51 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: Re-implementing connectors as MRML nodes.

Revision 9963 - Directory Listing
Modified Fri Jul 17 20:12:03 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: remove all reference to vtkEMSegmentIntensityPreNormalization. This class is no longer in use.

Revision 9958 - Directory Listing
Modified Fri Jul 17 16:25:48 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: save/load user's choice on mappers

Revision 9957 - Directory Listing
Modified Fri Jul 17 04:42:23 2009 UTC (8 years, 3 months ago) by hong
Original Path: trunk/Modules
BUG: locator position initialization by smkim

Revision 9956 - Directory Listing
Modified Thu Jul 16 21:24:48 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: remove deleted files from CMakeLists.txt

Revision 9955 - Directory Listing
Modified Thu Jul 16 20:44:16 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: remove directory and files that are not used anymore

Revision 9954 - Directory Listing
Modified Thu Jul 16 13:05:11 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: merged recent GPU ray cast change in volumerendering to volumerendering1 to reduce possible overhead when replacing volumerendering with volumerendering1

Revision 9952 - Directory Listing
Modified Thu Jul 16 01:22:50 2009 UTC (8 years, 3 months ago) by alexy
Original Path: trunk/Modules
ENH: added new volume rendering module

Revision 9949 - Directory Listing
Modified Wed Jul 15 20:11:29 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: the correct way of setting MRML observers propagated to the affected modules (followup for r9941)

Revision 9946 - Directory Listing
Modified Wed Jul 15 17:04:03 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
BUG: restore expected fps when select different rendering method

Revision 9944 - Directory Listing
Modified Wed Jul 15 16:11:19 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: corrected MRML event observer addition

Revision 9943 - Directory Listing
Modified Wed Jul 15 15:53:56 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: propagating the change in the way MRML observers should be registered for VTK events (commit 9941)

Revision 9941 - Directory Listing
Modified Wed Jul 15 15:34:32 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk/Modules
BUG: add new method to lookup the standard VTK event numbers for strings (like ModifiedEvent).  This was required because the vtkCommand list of events was edited such that the old numbers were no longer valid

Revision 9940 - Directory Listing
Modified Wed Jul 15 15:11:54 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
BUG: enable composite with shading by default

Revision 9939 - Directory Listing
Modified Wed Jul 15 14:50:23 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: fragment shader program optimization

Revision 9938 - Directory Listing
Modified Wed Jul 15 14:49:55 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: added composite with pseudo shading for low end GPU that is slow to do real shading

Revision 9935 - Directory Listing
Modified Wed Jul 15 14:24:15 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: did not listen to the right event


Revision 9932 - Directory Listing
Modified Tue Jul 14 21:42:46 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
COMP: fixing include file

Revision 9931 - Directory Listing
Modified Tue Jul 14 20:38:00 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: fixing leaks, delete extra kw widgets that were missing Delete calls

Revision 9930 - Directory Listing
Modified Tue Jul 14 17:21:35 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: really fixing the memory leak this time

Revision 9929 - Directory Listing
Modified Tue Jul 14 16:39:18 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: disable vol rendering for now


Revision 9928 - Directory Listing
Modified Tue Jul 14 16:35:29 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
ENH: restructuring


Revision 9927 - Directory Listing
Modified Tue Jul 14 16:05:15 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
COMP: compiler warning, cast

Revision 9926 - Directory Listing
Modified Tue Jul 14 15:45:15 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
COMP: reducing compiler warnings

Revision 9925 - Directory Listing
Modified Tue Jul 14 15:33:09 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: avoiding crash on exit by init BiasIntensityScale to null

Revision 9924 - Directory Listing
Modified Tue Jul 14 15:02:19 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk/Modules
ENH: unscaled trafo fix

Revision 9923 - Directory Listing
Modified Mon Jul 13 21:57:45 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: cleaning up memory leak caused by removing a different observer on the logic than was added 

Revision 9922 - Directory Listing
Modified Mon Jul 13 21:32:56 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: fix conversion from double to unsigned int

Revision 9921 - Directory Listing
Modified Mon Jul 13 21:28:26 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
STYLE: rename variables, avoid abbreviations, use meaningfull names, comply with VTK standards

Revision 9920 - Directory Listing
Modified Mon Jul 13 21:10:42 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
ENH: enabled FastMarching for testing


Revision 9919 - Directory Listing
Modified Mon Jul 13 19:22:11 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixing bugs caused by incorrect assumptions about VTK memory
management


Revision 9918 - Directory Listing
Modified Mon Jul 13 18:35:01 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: asign instead of compare

Revision 9917 - Directory Listing
Modified Mon Jul 13 18:16:12 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: memory management, avoiding crash on exit.

Revision 9916 - Directory Listing
Modified Mon Jul 13 15:45:08 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
BUGFIX: GPU ray casting shading algorithm

Revision 9915 - Directory Listing
Modified Mon Jul 13 15:42:53 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: fix warnings about conversions from double to unsigned int

Revision 9914 - Directory Listing
Modified Mon Jul 13 15:18:52 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: fix warnings for unused variables. STYLE: comply with VTK standards

Revision 9913 - Directory Listing
Modified Mon Jul 13 14:45:58 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: replace round(value) with (int)(value+0.5) to fix compilation on Windows

Revision 9912 - Directory Listing
Modified Mon Jul 13 14:44:22 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: improve speed, remove unnecessary conversions of images, add error messages. STYLE: comply with VTK standards

Revision 9911 - Directory Listing
Modified Fri Jul 10 22:36:09 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG:(s) disabled FastMarching -- not ready for public use at the moment


Revision 9910 - Directory Listing
Modified Fri Jul 10 22:32:39 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: fixing memory leak

Revision 9909 - Directory Listing
Modified Fri Jul 10 22:27:20 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: fixing a memory leak, forgot to move the Transform vars outside the vtk version check

Revision 9908 - Directory Listing
Modified Fri Jul 10 22:13:19 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: cleaning up memory leaks

Revision 9907 - Directory Listing
Modified Fri Jul 10 20:59:02 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: reducing memory leaks

Revision 9906 - Directory Listing
Modified Fri Jul 10 19:09:39 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
COMP: getting rid of compiler warnings, casting mostly

Revision 9905 - Directory Listing
Modified Fri Jul 10 19:06:51 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
BUG: SignalToConcent(self, signal) and ConcentToSignal(self, concent)

Revision 9904 - Directory Listing
Modified Fri Jul 10 18:29:29 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: cleaning up crash on exit problems, init vars, use TearDownGUI

Revision 9903 - Directory Listing
Modified Fri Jul 10 18:29:04 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: changing integration method.

Revision 9900 - Directory Listing
Modified Fri Jul 10 16:53:45 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix the Gaussian 2D callbacks

Revision 9899 - Directory Listing
Modified Fri Jul 10 16:45:29 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix the Gaussian 2D callbacks

Revision 9898 - Directory Listing
Modified Fri Jul 10 15:31:37 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: commandline testing script

Revision 9897 - Directory Listing
Modified Fri Jul 10 11:33:32 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: putting some multi-thread testing codes ... 

Revision 9896 - Directory Listing
Modified Fri Jul 10 01:57:53 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: Updated tool tip text on the GPU memory size option.

Revision 9895 - Directory Listing
Modified Thu Jul 9 19:24:53 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: fix the speed issue when rendering the 2D Gaussian distributions. STYLE: fix variable names to comply with VTK standards.

Revision 9891 - Directory Listing
Modified Thu Jul 9 03:17:23 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: GPU ray cast by default with shading

Revision 9890 - Directory Listing
Modified Thu Jul 9 03:16:48 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: internal texture size now depends on user specified GPU video memory size.

Revision 9888 - Directory Listing
Modified Wed Jul 8 21:14:40 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: remove classes created for debugging purposed

Revision 9886 - Directory Listing
Modified Wed Jul 8 19:53:37 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: include vtkEMSegment.h to define the symbol VTK_EMSEGMENT_EXPORT

Revision 9885 - Directory Listing
Modified Wed Jul 8 19:50:47 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: make vtkGaussian2DWidget inherit from vtkKWRenderWidget and not from vtkKWCompositeWidget

Revision 9884 - Directory Listing
Modified Wed Jul 8 18:53:20 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: add VTK_EMSEGMENT_EXPORT symbol for building libraries on Windows

Revision 9883 - Directory Listing
Modified Wed Jul 8 18:33:46 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: set the ruler text scale so that it doesn't change as the line length changes. Removed compiler warning. Changed default location of the ruler so it shows up better when in default 3d view

Revision 9882 - Directory Listing
Modified Wed Jul 8 17:51:55 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
ENH: more descriptive names


Revision 9881 - Directory Listing
Modified Wed Jul 8 17:29:03 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
ENH: allow to control ROI visibility, minor improvements


Revision 9880 - Directory Listing
Modified Wed Jul 8 16:27:05 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
ENH: allow to select interpolator


Revision 9879 - Directory Listing
Modified Wed Jul 8 16:04:50 2009 UTC (8 years, 3 months ago) by alexy
Original Path: trunk/Modules
BUG_FIXED: initialized Volume Rendering

Revision 9878 - Directory Listing
Modified Wed Jul 8 02:34:50 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
BUG: fixing invalid free() call.

Revision 9876 - Directory Listing
Modified Wed Jul 8 01:53:55 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: added multi-threaded map generation. (it doesn't work currently....)

Revision 9875 - Directory Listing
Modified Tue Jul 7 23:42:13 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: add button to select the rendering type of the gaussian 2D widget. The rendering can either be 2D or 3D.

Revision 9874 - Directory Listing
Modified Tue Jul 7 22:22:02 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
ENH: make sure inputs are not under transforms


Revision 9873 - Directory Listing
Modified Tue Jul 7 22:10:59 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
ENH: removed some of the dead code


Revision 9872 - Directory Listing
Modified Tue Jul 7 21:23:13 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: add vtkGaussian2DWidget.cxx to the list of source files. This class was added in the EMSegment Wizard to model the intensity classes using Gaussian distributions.

Revision 9871 - Directory Listing
Modified Tue Jul 7 21:04:10 2009 UTC (8 years, 3 months ago) by alexy
Original Path: trunk/Modules
ENH: new architecture for Volume rendering modules

Revision 9870 - Directory Listing
Modified Tue Jul 7 21:02:36 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: intensity shift to handle negative values, corrected scale value


Revision 9869 - Directory Listing
Modified Tue Jul 7 20:37:19 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: replace round with (int)(value+0.5) to fix compilation error on Windows. STYLE: expand abbreviations with full variable name. fix indentation

Revision 9868 - Directory Listing
Modified Tue Jul 7 18:18:18 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: replace round with (int)(value+0.5) to fix compilation error on Windows. STYLE: expand abbreviations with full variable name. fix indentation

Revision 9867 - Directory Listing
Modified Tue Jul 7 16:44:51 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: add missing class variables to the EMSegment to manipulate the Gaussian 2D Widget.

Revision 9865 - Directory Listing
Modified Tue Jul 7 15:22:56 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: ROI label off by 1


Revision 9862 - Directory Listing
Modified Tue Jul 7 04:06:28 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: classes for the visualization of 2D Gaussian distributions in EM Segment. The intensity distributions of classes are modeled as a Gaussian. The interface of vtkGaussian2DWidget allows for the manipulation of two volumes, each volume being represented along one axis.

Revision 9860 - Directory Listing
Modified Mon Jul 6 23:38:43 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: the Windows compiler does not like allocation like this: double values[number]. The fix was to replace it with: double *values = new double[number]

Revision 9858 - Directory Listing
Modified Mon Jul 6 22:12:56 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: deep copy image data to preserve segmentation from being destroyed
in the subsequent invocation of the fast marching filter


Revision 9857 - Directory Listing
Modified Mon Jul 6 21:23:16 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
ENH: input image is now rescaled to have range of 300 prior to
segmentation to provide acceptable performance for typical brain 
volumes with large intensity ranges


Revision 9854 - Directory Listing
Modified Mon Jul 6 14:44:31 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk/Modules
ENH: development work at MIT project week 2009.

Revision 9853 - Directory Listing
Modified Mon Jul 6 14:41:09 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk/Modules
ENH: development work at MIT project week 2009.

Revision 9851 - Directory Listing
Modified Sun Jul 5 19:23:04 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: Using time stamp information in TimeSeriesBundleNode.

Revision 9850 - Directory Listing
Modified Sun Jul 5 19:22:31 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: Set default frame rate 1 s. Calling Modified() funciton on setting time stamps in TimeSeriesBundleNode.

Revision 9849 - Directory Listing
Modified Sun Jul 5 16:52:39 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
PERF: compile Python code in the C++ class

Revision 9848 - Directory Listing
Modified Sat Jul 4 19:49:56 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: fixing compile warninigs

Revision 9847 - Directory Listing
Modified Sat Jul 4 05:30:41 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
PERF: reducing number of Python code generation

Revision 9846 - Directory Listing
Modified Sat Jul 4 04:51:53 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: adding progress meter for map generation

Revision 9845 - Directory Listing
Modified Sat Jul 4 03:55:04 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
BUG: Fixing a problem that parameters are not passed to the curve analysis script during map generation.

Revision 9842 - Directory Listing
Modified Thu Jul 2 20:23:23 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: memory leak


Revision 9840 - Directory Listing
Modified Thu Jul 2 18:34:03 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
BUG: fixed GUI panel repositioning when switching to different tabs (UseFrameWithScrollbarsOn())

Revision 9839 - Directory Listing
Modified Thu Jul 2 18:00:27 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: multi-threaded gradients calculation in GPU ray casting. By default using number_of_CPU threads.

Revision 9837 - Directory Listing
Modified Thu Jul 2 15:50:31 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: Activating FourDImage module.

Revision 9835 - Directory Listing
Modified Wed Jul 1 17:26:18 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
BUG: fixed crash when switching internal volume size limit

Revision 9834 - Directory Listing
Modified Wed Jul 1 16:15:30 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: non-power-of-two texture support in GPU ray casting

Revision 9832 - Directory Listing
Modified Tue Jun 30 21:11:25 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixing backface cull and color, got rid of multiple pass crash and crash on exit

Revision 9831 - Directory Listing
Modified Tue Jun 30 20:44:46 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
STYLE: changing documentation URL.

Revision 9830 - Directory Listing
Modified Tue Jun 30 20:16:23 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
STYLE: changing panel name

Revision 9829 - Directory Listing
Modified Tue Jun 30 20:07:27 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
STYLE: changing panel titles

Revision 9828 - Directory Listing
Modified Tue Jun 30 18:19:33 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
ENH: allow user to turn off volume rendering


Revision 9827 - Directory Listing
Modified Tue Jun 30 17:55:34 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: invalid timescroll updates fixed


Revision 9826 - Directory Listing
Modified Tue Jun 30 17:44:11 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
ENH: bugfixes, improved interaction, corrected instructions


Revision 9825 - Directory Listing
Modified Tue Jun 30 13:01:59 2009 UTC (8 years, 3 months ago) by millerjv
Original Path: trunk/Modules
ENH: Pass diffusion weighted, diffusion tensor, and general vector images through memory to shared object command line modules instead of files. \nNOTE: RAS to LPS conversions are performed on the measurement frames which should be correct for DW and DT data.  However, general vector images are probably not handled properly here (or elsewhere in Slicer) where an RAS to LPS conversion should modify components of each vector (flip the sign on x and y components.

Revision 9823 - Directory Listing
Modified Mon Jun 29 21:17:22 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: import scalar volume nodes by node name

Revision 9822 - Directory Listing
Modified Mon Jun 29 19:21:54 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
BUG: gradient calculation

Revision 9821 - Directory Listing
Modified Mon Jun 29 17:56:54 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: changed GPU ray cast mapper internal texture storage format for adding new features

Revision 9819 - Directory Listing
Modified Mon Jun 29 16:56:25 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk/Modules
ENH: stochastic tractography batch version with parallelization support

Revision 9818 - Directory Listing
Modified Mon Jun 29 16:53:39 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk/Modules
ENH: stochastic tractography batch version with parallelization support

Revision 9817 - Directory Listing
Modified Mon Jun 29 16:40:10 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk/Modules
ENH: stochastic tractography batch version with parallelization support

Revision 9816 - Directory Listing
Modified Mon Jun 29 10:53:34 2009 UTC (8 years, 3 months ago) by lantiga
Original Path: trunk/Modules
ENH: removing legacy Python modules. These have been moved to the Slicer wiki to be used as samples for developers.

Revision 9815 - Directory Listing
Modified Mon Jun 29 03:19:21 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
ENH: Time series node can be created from node selector.

Revision 9814 - Directory Listing
Modified Sun Jun 28 21:27:00 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
STYLE: changing class name: vtkMRML4DBundleNode -> vtkMRMLTimeSeriesBundleNode

Revision 9813 - Directory Listing
Modified Sun Jun 28 21:19:52 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
STYLE: changing class name: vtkMRML4DBundleNode -> vtkMRMLTimeSeriesBundleNode

Revision 9811 - Directory Listing
Modified Sat Jun 27 17:58:36 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: shader program optimization: different shader for different data type (1, 2, 4, components), reduce if... statement in shader program for better performance

Revision 9810 - Directory Listing
Modified Sat Jun 27 04:10:15 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: enable the compilation of the MRI Bias Field Correction module developed at the NA-MIC Week at MIT June 22-26, 2009

Revision 9809 - Directory Listing
Modified Sat Jun 27 02:39:00 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: new feature (MI-MIP)

Revision 9808 - Directory Listing
Modified Sat Jun 27 01:16:28 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: GPU ray casting optimization

Revision 9807 - Directory Listing
Modified Fri Jun 26 23:41:19 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: cleaning up (256)

Revision 9805 - Directory Listing
Modified Fri Jun 26 18:24:17 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: cleaning up (2048 vs 256)

Revision 9802 - Directory Listing
Modified Fri Jun 26 14:57:40 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: first pass at using the color node of the volume being edited.

Revision 9798 - Directory Listing
Modified Thu Jun 25 21:49:59 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
BUG: don't use the surface labels FS color node any more

Revision 9795 - Directory Listing
Modified Thu Jun 25 20:53:21 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: New feature: Volumetric depth peeling in GPU ray casting.

Revision 9793 - Directory Listing
Modified Thu Jun 25 19:07:27 2009 UTC (8 years, 3 months ago) by alexy
Original Path: trunk/Modules
ENH: added integration step for label seeding

Revision 9791 - Directory Listing
Modified Thu Jun 25 13:49:38 2009 UTC (8 years, 3 months ago) by alexy
Original Path: trunk/Modules
ENH: added Update Volume Display On Load option

Revision 9787 - Directory Listing
Modified Wed Jun 24 18:59:31 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
ENH: the affine widget works under 5.2

Revision 9786 - Directory Listing
Modified Wed Jun 24 18:20:46 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk/Modules
ENH: adding affine widget, works with vtk 5.4

Revision 9782 - Directory Listing
Modified Wed Jun 24 15:59:39 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: minor optimization (avoid division in double/triple for loops when calculating gradients)

Revision 9781 - Directory Listing
Modified Wed Jun 24 15:58:14 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: minor GUI update

Revision 9780 - Directory Listing
Modified Wed Jun 24 15:30:28 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: GPU ray casting GUI minor update
ENH: gradient progress bar behavior change: using external progress bar right now for 4D rendering

Revision 9779 - Directory Listing
Modified Wed Jun 24 15:30:14 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk/Modules
ENH: GPU ray casting GUI minor update
ENH: gradient progress bar behavior change: using external progress bar right now for 4D rendering

Revision 9778 - Directory Listing
Modified Wed Jun 24 15:19:25 2009 UTC (8 years, 3 months ago) by alexy
Original Path: trunk/Modules
ENH: ROI seeding of streamlines allows arbitrary ROI volume (different voxels than tensor). However external transforms applied to the volumes are still ignored because not passed to CLI.

Revision 9774 - Directory Listing
Modified Tue Jun 23 23:29:09 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: create a command line functionality for the mri bias field correction module. add testing

Revision 9768 - Directory Listing
Modified Tue Jun 23 16:44:22 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: restting GUI panel width to default width on exit from module

Revision 9767 - Directory Listing
Modified Tue Jun 23 16:35:37 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: resetting GUI panel width to default width on exit from module

Revision 9765 - Directory Listing
Modified Tue Jun 23 15:32:18 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix warnings. remove unused variables. improve coding style

Revision 9764 - Directory Listing
Modified Tue Jun 23 15:30:52 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix warnings. remove unused variables. improve coding style

Revision 9762 - Directory Listing
Modified Tue Jun 23 14:22:26 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
COMP: fix warnings. remove unused variables. improve coding style

Revision 9759 - Directory Listing
Modified Mon Jun 22 20:40:11 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
BUG: fix semi-colon typo. remove unused variables.

Revision 9758 - Directory Listing
Modified Mon Jun 22 17:58:52 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: moving from module to base

Revision 9757 - Directory Listing
Modified Mon Jun 22 17:00:51 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: create features to improve the usability of the EM Module. The goal is to enable the clinician to perform segmentation by expectation maximization in an efficient fashion. Among other features, an histogram visualization window has been implemented to let the user select the different percentages for the EM classes within an intuitive user interface.

Revision 9756 - Directory Listing
Modified Mon Jun 22 17:00:44 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: create features to improve the usability of the EM Module. The goal is to enable the clinician to perform segmentation by expectation maximization in an efficient fashion. Among other features, an histogram visualization window has been implemented to let the user select the different percentages for the EM classes within an intuitive user interface.

Revision 9755 - Directory Listing
Modified Mon Jun 22 16:26:23 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding code under development; not exposed to build

Revision 9754 - Directory Listing
Modified Mon Jun 22 16:14:49 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: create features to improve the usability of the EM Module. The goal is to enable the clinician to perform segmentation by expectation maximization in an efficient fashion. Among other features, an histogram visualization window has been implemented to let the user select the different percentages for the EM classes within an intuitive user interface.

Revision 9752 - Directory Listing
Modified Mon Jun 22 15:24:11 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk/Modules
ENH: add a module for MRI bias field correction. This module takes an MRI volume and a mask and correct the intensity inhomogeneity in the MRI volume. The algorithm builds upon the non-uniform non-parametric intensity normalization (N3) method of Styner et al. The implementation is based on Nick Tustison's classes as well as new classes for the Slicer3 logic and the user interface.

Revision 9751 - Directory Listing
Modified Mon Jun 22 04:39:13 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk/Modules
STYLE: changing names of functions and variables

Revision 9748 - Directory Listing
Modified Mon Jun 22 00:11:54 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
ENH: fixed one of the sampling issues


Revision 9747 - Directory Listing
Modified Sun Jun 21 20:37:13 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: image data installed


Revision 9746 - Directory Listing
Modified Sun Jun 21 20:35:19 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect reference to image data fixed


Revision 9745 - Directory Listing
Modified Sat Jun 20 21:44:22 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
ENH: working on parameter map function.

Revision 9744 - Directory Listing
Modified Sat Jun 20 21:15:56 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
BUG: fixed runtime error on Windows (tried to use an uninitialized variable)

Revision 9743 - Directory Listing
Modified Sat Jun 20 20:56:03 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
BUG: chaging arguments for vtkFourDImageLogic::LoadImagesFromDir()

Revision 9742 - Directory Listing
Modified Sat Jun 20 20:43:16 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
BUG: initial contrast setting

Revision 9741 - Directory Listing
Modified Sat Jun 20 20:24:23 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
ENH: Changing play/pause buttons in Frame Control

Revision 9737 - Directory Listing
Modified Fri Jun 19 19:06:40 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk/Modules
ENH: progress bar enabled


Revision 9736 - Directory Listing
Modified Fri Jun 19 18:19:43 2009 UTC (8 years, 4 months ago) by jvs
Original Path: trunk/Modules
ENH: binarize / fiducial2labelmaps

Revision 9735 - Directory Listing
Modified Fri Jun 19 18:02:23 2009 UTC (8 years, 4 months ago) by jvs
Original Path: trunk/Modules
ENH: ijk/ras switch

Revision 9734 - Directory Listing
Modified Fri Jun 19 16:24:57 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk/Modules
STYLE: cleanup


Revision 9733 - Directory Listing
Modified Fri Jun 19 15:48:32 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk/Modules
ENH: improved precision of ROI resizing by in-slice clicks


Revision 9732 - Directory Listing
Modified Fri Jun 19 13:25:36 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
ENH: Added FourDAnalysis module in CMakeLists.txt

Revision 9731 - Directory Listing
Modified Fri Jun 19 03:50:44 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
ENH: added FourDAnalysis module.

Revision 9730 - Directory Listing
Modified Fri Jun 19 03:47:11 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
BUG: changed the documentation URL in the help frame

Revision 9729 - Directory Listing
Modified Thu Jun 18 22:43:21 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk/Modules
ENH: module for extracting and resampling a volume of interest from a
scalar volume -- initial commit. This is work in progress, a lot of
features are missing. This is committed in preparation for the 
programming week and to collect early feedback from Ron.


Revision 9728 - Directory Listing
Modified Thu Jun 18 19:16:18 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: added more user interface.

Revision 9721 - Directory Listing
Modified Thu Jun 18 03:42:54 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding model mirror to build, though it still has some bugs

Revision 9720 - Directory Listing
Modified Wed Jun 17 20:57:55 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
ENH: put icons on play/stop button

Revision 9719 - Directory Listing
Modified Wed Jun 17 17:38:50 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding model mirroring framework. has bugs in logic, not added to modules CMakeLists.txt

Revision 9715 - Directory Listing
Modified Wed Jun 17 13:37:10 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk/Modules
STYLE: fix spelling errors identified by Dominique as part of the debian checkin process

Revision 9713 - Directory Listing
Modified Tue Jun 16 22:21:40 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
BUG: removed module names not in the repository

Revision 9712 - Directory Listing
Modified Tue Jun 16 22:03:00 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
BUG: removed modules, which do not exist in the repository, from CMakeList.txt. 

Revision 9707 - Directory Listing
Modified Tue Jun 16 16:09:12 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: added more user interface.

Revision 9706 - Directory Listing
Modified Tue Jun 16 16:08:15 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: increased wizard widget height from 320 to 400.

Revision 9705 - Directory Listing
Modified Tue Jun 16 15:48:01 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
ENH: Added FourDImage module.

Revision 9701 - Directory Listing
Modified Mon Jun 15 21:00:00 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: continued development.

Revision 9700 - Directory Listing
Modified Mon Jun 15 20:59:12 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: continued development.

Revision 9695 - Directory Listing
Modified Sun Jun 14 21:00:31 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
BUG: removed class vtkKWGuideWidget from here.

Revision 9694 - Directory Listing
Modified Sun Jun 14 21:00:24 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
BUG: removed class vtkKWGuideWidget from here.

Revision 9693 - Directory Listing
Modified Sun Jun 14 20:53:32 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 9692 - Directory Listing
Modified Sun Jun 14 20:51:59 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 9691 - Directory Listing
Modified Sun Jun 14 20:51:14 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: added class vtkKWGuideWidget.

Revision 9690 - Directory Listing
Modified Fri Jun 12 20:28:57 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
COMP: tcl wrapping ignores the ifdef

Revision 9688 - Directory Listing
Modified Fri Jun 12 19:59:07 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
ENH: moved to a 3d line representation for the ruler, got it linked to models, still some debugging to do

Revision 9681 - Directory Listing
Modified Wed Jun 10 22:23:53 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
STYLE: var name changes, adding frames. Still working on getting the ruler attached to a model

Revision 9671 - Directory Listing
Modified Tue Jun 9 22:17:49 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
BUG: make the angle text readable with a scale of 10

Revision 9669 - Directory Listing
Modified Tue Jun 9 22:00:49 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
ENH: putting in ifdefs to compile with vtk 5.4

Revision 9668 - Directory Listing
Modified Tue Jun 9 20:31:12 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
ENH: adding Measurements module

Revision 9667 - Directory Listing
Modified Tue Jun 9 20:30:44 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
ENH: first pass at VTK5.4 Measurements module, with ifdefs to compile with 5.2

Revision 9666 - Directory Listing
Modified Tue Jun 9 20:29:01 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
BUG: init Index

Revision 9664 - Directory Listing
Modified Tue Jun 9 15:35:30 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 9663 - Directory Listing
Modified Tue Jun 9 15:34:18 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk/Modules
ENH: added class vtkKWGuideWidget.

Revision 9659 - Directory Listing
Modified Mon Jun 8 21:41:57 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
STYLE: better error message

Revision 9648 - Directory Listing
Modified Wed Jun 3 20:36:27 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: getting rid of CDash complaints

Revision 9642 - Directory Listing
Modified Wed Jun 3 19:09:42 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: making FetchMI keep metadata current on data loaded while FetchMI is not raised

Revision 9638 - Directory Listing
Modified Tue Jun 2 19:57:17 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
BUG: cleaning up some memory issues

Revision 9635 - Directory Listing
Modified Mon Jun 1 15:12:09 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
BUG: fixed image position problem (vector lengths in the IMAGE message were not used to calculate the image center position)

Revision 9633 - Directory Listing
Modified Sun May 31 13:17:16 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: cleaning up CDASH graffitti

Revision 9631 - Directory Listing
Modified Fri May 29 20:48:17 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk/Modules
BUG: fixed bug that Slicer always centers imported images.

Revision 9630 - Directory Listing
Modified Fri May 29 20:19:43 2009 UTC (8 years, 4 months ago) by vrnova
Original Path: trunk/Modules
ENH: gpu ray casting parameter adjustment

Revision 9624 - Directory Listing
Modified Fri May 29 16:19:35 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: added ability to select existing or create new label maps from existing volumes

Revision 9623 - Directory Listing
Modified Fri May 29 14:26:11 2009 UTC (8 years, 4 months ago) by vrnova
Original Path: trunk/Modules
ENH: minor GUI adjustment on the performance tab

Revision 9622 - Directory Listing
Modified Fri May 29 13:53:38 2009 UTC (8 years, 4 months ago) by vrnova
Original Path: trunk/Modules
BUG: fixed looping problem when re-entering volume rendering module

Revision 9620 - Directory Listing
Modified Fri May 29 03:13:34 2009 UTC (8 years, 4 months ago) by jvs
Original Path: trunk/Modules
ENH: DTI conversion

Revision 9618 - Directory Listing
Modified Thu May 28 14:39:33 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
STYLE: added contributor info

Revision 9612 - Directory Listing
Modified Wed May 27 21:44:03 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
STYLE: changing the label text on the color selector widgets to say LUT instead of color

Revision 9609 - Directory Listing
Modified Wed May 27 19:15:28 2009 UTC (8 years, 4 months ago) by clisle
Original Path: trunk/Modules
BUG: Added license for MIMX Meshing Module

Revision 9603 - Directory Listing
Modified Tue May 26 15:36:10 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk/Modules
BUG: up the widget width for the label to show four digits, to work with FreeSurfer FSLabels LUT

Revision 9598 - Directory Listing
Modified Sat May 23 01:25:30 2009 UTC (8 years, 4 months ago) by jvs
Original Path: trunk/Modules
ENH: connectivity feature + code cleaning

Revision 9597 - Directory Listing
Modified Fri May 22 22:22:13 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk/Modules
ENH: added range widget for better precision


Revision 9596 - Directory Listing
Modified Fri May 22 13:13:25 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk/Modules
ENH: switch to transform view mode after segmentation; TODO:
SlicerToolbarGUI doesn't update on Modified()


Revision 9595 - Directory Listing
Modified Fri May 22 12:33:55 2009 UTC (8 years, 4 months ago) by lantiga
Original Path: trunk/Modules
ENH: enhanced documentation and acknowledgements of Python scripts

Revision 9594 - Directory Listing
Modified Thu May 21 21:39:48 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk/Modules
ENH: added volume rendering, changed scroll-back event handling to
improve performance, fixed few minor issues


Revision 9591 - Directory Listing
Modified Thu May 21 21:07:47 2009 UTC (8 years, 4 months ago) by barre
Original Path: trunk/Modules
ENH: debug leak...

Revision 9590 - Directory Listing
Modified Thu May 21 19:11:24 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding fiber bundle handling into FetchMI

Revision 9586 - Directory Listing
Modified Thu May 21 19:08:07 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding CTSC acknowledgement and updating description of loadable modules

Revision 9581 - Directory Listing
Modified Thu May 21 17:10:35 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: merging changes from branch into trunk: new www icon

Revision 9580 - Directory Listing
Modified Thu May 21 16:10:24 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding ability to distinguish fiber bundles from vtk models in the add data widget

Revision 9577 - Directory Listing
Modified Thu May 21 13:14:39 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk/Modules
ENH: minor bugfix

Revision 9576 - Directory Listing
Modified Thu May 21 13:11:54 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk/Modules
ENH: minor bugfix

Revision 9572 - Directory Listing
Modified Wed May 20 21:19:03 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: committing a fix that hope will prevent unstable GUI resizing in Editor by allowing parent frame to expand

Revision 9571 - Directory Listing
Modified Wed May 20 20:57:25 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: few more improvements


Revision 9569 - Directory Listing
Modified Wed May 20 20:29:45 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: incremental improvements


Revision 9562 - Directory Listing
Modified Tue May 19 21:25:56 2009 UTC (8 years, 5 months ago) by barre
Original Path: trunk/Modules
ENH: fix linking issue in ChangeTrackerTest

Revision 9549 - Directory Listing
Modified Tue May 19 17:16:41 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: GUI restructuring and simplification


Revision 9547 - Directory Listing
Modified Tue May 19 16:11:35 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leaking lookup table

Revision 9546 - Directory Listing
Modified Tue May 19 16:01:35 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: merging fixes from 3.4 release branch

Revision 9541 - Directory Listing
Modified Mon May 18 22:54:28 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: added ack logos


Revision 9540 - Directory Listing
Modified Mon May 18 22:31:00 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: install logo image data


Revision 9537 - Directory Listing
Modified Mon May 18 21:29:54 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: don't accelerate tool tips - may cause race conditions during updates

Revision 9533 - Directory Listing
Modified Mon May 18 21:09:42 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: make the check point feature optional to avoid memory problems with large volumes (and small computers)

Revision 9530 - Directory Listing
Modified Mon May 18 19:56:40 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: reorganization of the C++ dependency classes to fix portability
problem


Revision 9527 - Directory Listing
Modified Mon May 18 19:16:23 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect name in win32 header


Revision 9512 - Directory Listing
Modified Sun May 17 17:49:19 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: wrong install target


Revision 9507 - Directory Listing
Modified Fri May 15 23:01:43 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix external progress helper code

Revision 9505 - Directory Listing
Modified Fri May 15 21:15:07 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: Added FastMarchingSegmentation module, derived from the original
implementation by Eric Pichon in Slicer2. Reference:

Pichon E, Tannenbaum A, Kikinis R. A statistically based flow for image
segmentation. Med Image Anal. 2004 Sep;8(3):267-74. PMID: 15450221.


Revision 9504 - Directory Listing
Modified Fri May 15 17:40:03 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
ENH: support for external progress indicator for rendering

Revision 9502 - Directory Listing
Modified Fri May 15 16:45:58 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk/Modules
ENH: code optimization for GPU ray cast with lighting

Revision 9486 - Directory Listing
Modified Thu May 14 16:29:16 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk/Modules
ENH: added osirix style win/level presets, no icons yet. Extended the presets to include icon and colour strings, change the colour node as well by reaching up into the parent widget

Revision 9469 - Directory Listing
Modified Tue May 12 20:29:35 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
STYLE: cleanup of GUI and slice interaction


Revision 9467 - Directory Listing
Modified Tue May 12 19:19:23 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: added slicer community to acknowledgement

Revision 9465 - Directory Listing
Modified Tue May 12 18:51:21 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: tracking www icon to match loadable module wizard's version

Revision 9455 - Directory Listing
Modified Mon May 11 21:03:52 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk/Modules
ENH: window/level presets for CT and PET volumes

Revision 9447 - Directory Listing
Modified Mon May 11 17:41:49 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: look for the maximum dot product direction for realinging orientation rather than expecting it always to be greater than 45 degrees

Revision 9443 - Directory Listing
Modified Sat May 9 14:44:42 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk/Modules
BUG: fixed typo on performance tab
ENH: roll back CPU ray casting highest quality parameter to ver. 3.2.

Revision 9422 - Directory Listing
Modified Thu May 7 17:56:25 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
ENH: make the vtkOpenGLScriptedActor example work to render actual opengl

Revision 9421 - Directory Listing
Modified Thu May 7 17:32:46 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
ENH: continued development.

Revision 9420 - Directory Listing
Modified Thu May 7 13:27:05 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix typo that prevented freeing of checkpoint volumes.  Also add variable so it's easier to change the number of checkpoints -- eventually there should be a GUI for changing this

Revision 9416 - Directory Listing
Modified Wed May 6 21:18:46 2009 UTC (8 years, 5 months ago) by sylvain
Original Path: trunk/Modules
ENH: adding a module to normalize the intensity of images. It is designed as a pre-processing step required for the Expectation-Maximization (EM) algorithm. The algorithm works as follows. First it computes the histogram of the input image, second it locates the mean value of the histogram, and finally it applies a normalization factor on the entire image. The parameters are the percentage of the pixel intensities to take into account and the regularization factor applied to the histogram. The rationale for not selecting the entire spectrum of pixel intensities is to remove the outliers in the image histogram. The regularization of the histogram is performed by an iterative averaging of the histogram bins. The significance of the regularization factor is a number of regularization steps. A regularization factor will smooth out the local minima in the histogram allowing for a better localization of the mean intensity at the cost of a larger processing time.

Revision 9414 - Directory Listing
Modified Wed May 6 19:43:09 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: ROI sampling increment could be 0, causing indefinite loop


Revision 9413 - Directory Listing
Modified Wed May 6 19:16:57 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 9412 - Directory Listing
Modified Wed May 6 19:16:46 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
ENH: more development.

Revision 9411 - Directory Listing
Modified Wed May 6 18:50:58 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: ROI widget resolution is now adjusted based on the image
dimensions


Revision 9409 - Directory Listing
Modified Wed May 6 15:31:28 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk/Modules
BUG: fixed vtkOpenGLExtensionManager leak in GPU ray casting mapper

Revision 9402 - Directory Listing
Modified Mon May 4 19:53:02 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
ENH: added module IGTPlanning.

Revision 9401 - Directory Listing
Modified Mon May 4 16:59:22 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
BUG: disabled IGTNavigation module for development.

Revision 9400 - Directory Listing
Modified Mon May 4 16:53:12 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
STYLE: cleaned up code.

Revision 9396 - Directory Listing
Modified Sun May 3 16:00:20 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: put back the polyline creation deleted in the previous check-in

Revision 9390 - Directory Listing
Modified Fri May 1 21:19:41 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: commiting changes to sync with 3-4 branch fixes


Revision 9388 - Directory Listing
Modified Fri May 1 20:54:42 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
BUG: cleaned up.

Revision 9387 - Directory Listing
Modified Fri May 1 20:40:42 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
ENH: added a new module - IGTNavigation.

Revision 9385 - Directory Listing
Modified Fri May 1 19:28:37 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: 560. Fixed mrml and widget events propagation for all kinds of volume display widgets and threshold/window level widget's histogram. Made it work with tear down and recreation of widgets.

Revision 9377 - Directory Listing
Modified Fri May 1 03:14:25 2009 UTC (8 years, 5 months ago) by tokuda
Original Path: trunk/Modules
ENH: clarify precedence at line 169.

Revision 9376 - Directory Listing
Modified Thu Apr 30 21:24:27 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
BUG: fixed a start crash.

Revision 9371 - Directory Listing
Modified Thu Apr 30 18:58:56 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
ENH: test of a new facility to write vtk actors with scripts (initially python using PyOpenGL and eventually teem)

Revision 9368 - Directory Listing
Modified Thu Apr 30 17:22:32 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
COMP: fix compile warnings

Revision 9357 - Directory Listing
Modified Wed Apr 29 20:59:51 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
COMP: merge warning fixes from 3.4 release branch to trunk

Revision 9350 - Directory Listing
Modified Tue Apr 28 20:52:45 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk/Modules
STYLE: fixed grammar in dialogue box

Revision 9348 - Directory Listing
Modified Tue Apr 28 19:48:02 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
BUG: completely fixed memory leaking.

Revision 9347 - Directory Listing
Modified Tue Apr 28 19:47:46 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
BUG: completely fixed memory leaking.

Revision 9340 - Directory Listing
Modified Tue Apr 28 13:44:19 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk/Modules
ENH: code cleaning

Revision 9336 - Directory Listing
Modified Mon Apr 27 21:00:43 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
STYLE: avoid compiler warning about unused variable

Revision 9335 - Directory Listing
Modified Mon Apr 27 20:57:11 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
COMP: fix compile warnings

Revision 9334 - Directory Listing
Modified Mon Apr 27 20:53:27 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
STYLE: fix warning message

Revision 9332 - Directory Listing
Modified Mon Apr 27 20:06:47 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
ENH: enabled parsing of "hidden" attribute for boolean type in CLI


Revision 9331 - Directory Listing
Modified Mon Apr 27 19:39:20 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix final leaks

Revision 9330 - Directory Listing
Modified Mon Apr 27 19:14:12 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leaks

Revision 9329 - Directory Listing
Modified Mon Apr 27 19:07:17 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk/Modules
ENH: cleaning up, looser hardware checking condition for GPU ray casting

Revision 9328 - Directory Listing
Modified Mon Apr 27 18:58:23 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix error in reference counts for MRML scene

Revision 9327 - Directory Listing
Modified Mon Apr 27 15:32:08 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk/Modules
ENH: same software ray casting behavior with older version

Revision 9326 - Directory Listing
Modified Mon Apr 27 15:13:51 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk/Modules
BUG: interation parameter setup bogus


Revision 9324 - Directory Listing
Modified Mon Apr 27 14:37:08 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leaks in ProstateNav.  Still a crash on exit that needs to be fixed

Revision 9323 - Directory Listing
Modified Fri Apr 24 19:14:32 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk/Modules
ENH: Modifying mapper behaviors. Confusing "Force High Quality" check button removed. More works on going...

Revision 9317 - Directory Listing
Modified Fri Apr 24 17:11:47 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk/Modules
ENH: Adjustment on perfomance/quality algorithm

Revision 9310 - Directory Listing
Modified Fri Apr 24 15:26:24 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
STYLE: fix indent issue

Revision 9306 - Directory Listing
Modified Fri Apr 24 04:33:03 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk/Modules
ENH: minor fixes

Revision 9304 - Directory Listing
Modified Thu Apr 23 23:08:02 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: fix out of date license files

Revision 9298 - Directory Listing
Modified Thu Apr 23 18:20:29 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
ENH: re-enabled ProstateNav module.

Revision 9295 - Directory Listing
Modified Thu Apr 23 17:26:57 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk/Modules
BUG: fixed a bug causing Slicer crash.

Revision 9292 - Directory Listing
Modified Thu Apr 23 17:04:45 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
BUG: put module into correct category in menu

Revision 9285 - Directory Listing
Modified Wed Apr 22 23:06:30 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk/Modules
ENH: re-enable expermental module for tractography exploration

Revision 9263 - Directory Listing
Modified Mon Apr 20 13:54:41 2009 UTC (8 years, 6 months ago) by hliu
Original Path: trunk/Modules
BUG: fixed image reformatting orientation for neuro navigation.

Revision 9261 - Directory Listing
Modified Mon Apr 20 01:25:26 2009 UTC (8 years, 6 months ago) by nicky
Original Path: trunk/Modules
BUG: fixing a typo regarding CUDA ray cast in Cropping. 


Revision 9258 - Directory Listing
Modified Fri Apr 17 18:08:13 2009 UTC (8 years, 6 months ago) by barre
Original Path: trunk/Modules
ENH: you may want to try with CUDA_SUPPORT_ENABLED to OFF...

Revision 9257 - Directory Listing
Modified Fri Apr 17 13:20:38 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: server loading bug

Revision 9256 - Directory Listing
Modified Fri Apr 17 13:11:12 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: server loading bug

Revision 9255 - Directory Listing
Modified Fri Apr 17 13:02:24 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: server loading bug

Revision 9252 - Directory Listing
Modified Fri Apr 17 09:06:19 2009 UTC (8 years, 6 months ago) by nicky
Original Path: trunk/Modules
ENH: add CUDA ray casting for volume rendering.


Revision 9251 - Directory Listing
Modified Fri Apr 17 00:22:19 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: wait for task to complete before exiting - this tests the task and also avoids leaking the command line module node

Revision 9249 - Directory Listing
Modified Thu Apr 16 22:29:54 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leak

Revision 9236 - Directory Listing
Modified Thu Apr 16 13:01:56 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix incorrect help strings

Revision 9233 - Directory Listing
Modified Wed Apr 15 22:34:11 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid crash on exit by being careful with observers

Revision 9232 - Directory Listing
Modified Wed Apr 15 22:23:46 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: more leak fixes and also remove creation of local vtkSlicerTheme instance

Revision 9231 - Directory Listing
Modified Wed Apr 15 22:18:19 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: leak fixes

Revision 9229 - Directory Listing
Modified Wed Apr 15 22:00:38 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leaks

Revision 9228 - Directory Listing
Modified Wed Apr 15 21:59:47 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: leaks and indents

Revision 9227 - Directory Listing
Modified Wed Apr 15 21:46:11 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: leak fix

Revision 9226 - Directory Listing
Modified Wed Apr 15 21:43:45 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: leak fix

Revision 9225 - Directory Listing
Modified Wed Apr 15 21:43:00 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: don't delete the render widget from outside - this is done in the MimxMainWindow

Revision 9224 - Directory Listing
Modified Wed Apr 15 21:40:12 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: leak fixing

Revision 9223 - Directory Listing
Modified Wed Apr 15 21:37:00 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: make instance variables to avoid leaks

Revision 9222 - Directory Listing
Modified Wed Apr 15 21:35:26 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
STYLE: indentation fixes

Revision 9221 - Directory Listing
Modified Wed Apr 15 21:06:46 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leaks

Revision 9220 - Directory Listing
Modified Wed Apr 15 20:09:16 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leaks and rework structure to more conventional MRML instance variable allocation

Revision 9219 - Directory Listing
Modified Wed Apr 15 20:02:34 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leaks and rework structure to more conventional MRML instance variable allocation

Revision 9218 - Directory Listing
Modified Wed Apr 15 19:48:48 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix missing call to Delete

Revision 9217 - Directory Listing
Modified Wed Apr 15 19:41:58 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: remove dupicate delete of filters in MRML nodes and add methods to break reference cycles to allow destructors to be called and fix some of the leaks

Revision 9213 - Directory Listing
Modified Wed Apr 15 18:24:09 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leak

Revision 9209 - Directory Listing
Modified Wed Apr 15 15:43:57 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: getting rid of a null node complaint

Revision 9205 - Directory Listing
Modified Wed Apr 15 10:28:06 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: turning observers on mrml/gui on when entered and off when exited. workaround, not a definitive fix

Revision 9204 - Directory Listing
Modified Wed Apr 15 06:01:22 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: code cleaning

Revision 9202 - Directory Listing
Modified Tue Apr 14 22:17:57 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: fixed crash in CLI on checking relative file path, changed ImageLabelCombine


Revision 9201 - Directory Listing
Modified Tue Apr 14 19:58:14 2009 UTC (8 years, 6 months ago) by hliu
Original Path: trunk/Modules
ENH: increased the range of the translation scale from (-20, 20) to (-80, 80) for DTI fiducial seeding.

Revision 9199 - Directory Listing
Modified Tue Apr 14 19:38:05 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: reorganize tear down sequence

Revision 9196 - Directory Listing
Modified Tue Apr 14 18:24:17 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: fixed typos

Revision 9191 - Directory Listing
Modified Tue Apr 14 16:07:29 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: disable ProstateNav until leak and crash issues sorted out

Revision 9187 - Directory Listing
Modified Tue Apr 14 15:22:27 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: re-enable freeing the steps array, but still don't call WizardWidget's Delete

Revision 9186 - Directory Listing
Modified Tue Apr 14 15:18:56 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: don't delete the wizard dialog, even though it leaks.  With Delete there is an unexplained crash

Revision 9185 - Directory Listing
Modified Tue Apr 14 15:08:17 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: remove edit icons that are yet implemented

Revision 9184 - Directory Listing
Modified Tue Apr 14 13:45:52 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: extra delete code to clean up leaks

Revision 9183 - Directory Listing
Modified Tue Apr 14 13:33:23 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leaks by allowing module GUI to destruct

Revision 9182 - Directory Listing
Modified Tue Apr 14 03:07:36 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: automatic server handling under posix os

Revision 9178 - Directory Listing
Modified Mon Apr 13 20:47:26 2009 UTC (8 years, 6 months ago) by hliu
Original Path: trunk/Modules
ENH: added support to move fiducial for DTI seeding.

Revision 9177 - Directory Listing
Modified Mon Apr 13 20:38:10 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixing the crash with lazybuild

Revision 9176 - Directory Listing
Modified Mon Apr 13 20:32:21 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid crash from tearing down unbuilt GUI and rearrange node creation code in attempt to avoid leak

Revision 9175 - Directory Listing
Modified Mon Apr 13 20:22:26 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: made ron's content changes in customizing slicer panel

Revision 9174 - Directory Listing
Modified Mon Apr 13 19:35:23 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: adapted FetchMI to build lazily, to only use gui observers when module is raised. made some gui modifications as per ron's suggestions

Revision 9172 - Directory Listing
Modified Mon Apr 13 19:33:33 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid double allocation of welcome icons

Revision 9171 - Directory Listing
Modified Mon Apr 13 19:19:42 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: add new modules to the testing list

Revision 9166 - Directory Listing
Modified Mon Apr 13 13:29:36 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: minor bugfix

Revision 9164 - Directory Listing
Modified Sun Apr 12 22:03:02 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: tesnsor optimization

Revision 9163 - Directory Listing
Modified Sun Apr 12 20:59:41 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: code cleaning

Revision 9161 - Directory Listing
Modified Sat Apr 11 18:43:23 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: adapt to measurment frame change in slicer

Revision 9159 - Directory Listing
Modified Fri Apr 10 22:00:14 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk/Modules
ENH: 3d view refocus on ROI updates in slice viewers


Revision 9153 - Directory Listing
Modified Fri Apr 10 21:05:37 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: Added Module add/remove tab, updated content, added option to show or not show welcome on startup

Revision 9152 - Directory Listing
Modified Fri Apr 10 21:04:19 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: new image data for Welcome module

Revision 9151 - Directory Listing
Modified Fri Apr 10 20:30:24 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: added image cast to subtract routine


Revision 9149 - Directory Listing
Modified Fri Apr 10 20:06:54 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: add progress, remove dead code, fix leaks

Revision 9148 - Directory Listing
Modified Fri Apr 10 20:04:29 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix remove islands effect

Revision 9137 - Directory Listing
Modified Fri Apr 10 17:37:44 2009 UTC (8 years, 6 months ago) by millerjv
Original Path: trunk/Modules
BUG: #448 and perhaps #440. Mac OS X defaults to RTLD_GLOBAL when using dlopen.  This causes all functions and variables within plugins to be accessible to main program as well as other plugins without having to use dlsym.  Many of the Slicer plugins have functions with the same name, e.g. DoIt().  If loaded with RTLD_GLOBAL, the wrong DoIt() method can be called.  There is no way to override this behavior through kwsys. So we hardcode the Mac OS X case to use dlopen directly instead of itksys::OpenLibrary().

Revision 9132 - Directory Listing
Modified Fri Apr 10 14:47:49 2009 UTC (8 years, 6 months ago) by naucoin
Original Path: trunk/Modules
COMP: getting rid of compiler warnings, commenting out unused vars, doubles to int

Revision 9128 - Directory Listing
Modified Fri Apr 10 13:09:50 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid freeing an already deleted image

Revision 9127 - Directory Listing
Modified Fri Apr 10 04:50:15 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfix connectivity

Revision 9124 - Directory Listing
Modified Fri Apr 10 03:11:08 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfix tensor input

Revision 9119 - Directory Listing
Modified Thu Apr 9 17:23:09 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: allow scrolling through slices while a draw outline is pending.  Indicate that drawing is not possible on this slice by switching to dashed line mode

Revision 9118 - Directory Listing
Modified Thu Apr 9 17:02:16 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: allow pan/zoom of slices with right mouse drag while draw outline is pending, then allow apply with right click

Revision 9117 - Directory Listing
Modified Thu Apr 9 16:42:18 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid killing the current tool when toggling the label color and other non-modal actions

Revision 9116 - Directory Listing
Modified Thu Apr 9 16:32:39 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfix tensor input

Revision 9112 - Directory Listing
Modified Thu Apr 9 15:14:40 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfix tensor input

Revision 9107 - Directory Listing
Modified Wed Apr 8 19:46:06 2009 UTC (8 years, 6 months ago) by naucoin
Original Path: trunk/Modules
BUG: when the CLI is complete, don't show the last progress message, it makes it hard to visually tell that it's really done

Revision 9100 - Directory Listing
Modified Tue Apr 7 19:52:53 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: 409 made volume threshold always update

Revision 9096 - Directory Listing
Modified Tue Apr 7 17:32:26 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: adding/removing GUI observers on module Enter/Exit

Revision 9089 - Directory Listing
Modified Tue Apr 7 15:48:53 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: added window status text during buildGUI

Revision 9088 - Directory Listing
Modified Tue Apr 7 14:10:41 2009 UTC (8 years, 6 months ago) by tokuda
Original Path: trunk/Modules
STYLE: added directory path igtlutil to the #include directives

Revision 9086 - Directory Listing
Modified Tue Apr 7 12:27:30 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
COMP: adapt to change in slice controller configuration (scale is now indpenedent of entry)

Revision 9085 - Directory Listing
Modified Tue Apr 7 11:14:24 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: added content and fixes to existing content

Revision 9084 - Directory Listing
Modified Tue Apr 7 11:13:14 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: new image data for Welcome

Revision 9082 - Directory Listing
Modified Mon Apr 6 22:07:51 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: made requested changes to module content and behavior

Revision 9081 - Directory Listing
Modified Mon Apr 6 22:05:27 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: modified and added new image data for welcome module

Revision 9079 - Directory Listing
Modified Mon Apr 6 20:19:59 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: modules relocation

Revision 9078 - Directory Listing
Modified Mon Apr 6 20:14:02 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: modules relocation

Revision 9077 - Directory Listing
Modified Mon Apr 6 17:39:29 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: add subvolume module requested by Ron for the 3.4 release

Revision 9076 - Directory Listing
Modified Mon Apr 6 17:04:24 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: modules relocation

Revision 9074 - Directory Listing
Modified Mon Apr 6 15:16:14 2009 UTC (8 years, 6 months ago) by lantiga
Original Path: trunk/Modules
BUG: invoke scene edited event to make MRML tree widget update itself after the module has run

Revision 9067 - Directory Listing
Modified Mon Apr 6 12:04:12 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: remove stray backslash character in xml file

Revision 9066 - Directory Listing
Modified Mon Apr 6 09:38:07 2009 UTC (8 years, 6 months ago) by lantiga
Original Path: trunk/Modules
ENH: add possibility of retaining the origin in the volume node rather than in the transform

Revision 9058 - Directory Listing
Modified Sun Apr 5 17:45:03 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk/Modules
ENH: changed ROI seeding to Label seeding

Revision 9056 - Directory Listing
Modified Sun Apr 5 17:03:21 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk/Modules
ENH: changed ROI seeding to Label seeding

Revision 9052 - Directory Listing
Modified Sun Apr 5 00:18:33 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfix - max tract length

Revision 9039 - Directory Listing
Modified Fri Apr 3 19:20:42 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: more capitalization issues with CheckPoint/Checkpoint and button state management issues

Revision 9038 - Directory Listing
Modified Fri Apr 3 19:04:43 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: change from Checkpoint to CheckPoint for consistency with icon names

Revision 9037 - Directory Listing
Modified Fri Apr 3 19:00:39 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: add missing icons

Revision 9035 - Directory Listing
Modified Fri Apr 3 18:14:03 2009 UTC (8 years, 6 months ago) by vrnova
Original Path: trunk/Modules
ENH: Software ray casting as default. FPS slider controls software ray casting mapper.

Revision 9033 - Directory Listing
Modified Fri Apr 3 15:26:59 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: refixed scalar only volume selection

Revision 9029 - Directory Listing
Modified Fri Apr 3 04:11:19 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfix fa/mode

Revision 9028 - Directory Listing
Modified Thu Apr 2 23:52:28 2009 UTC (8 years, 6 months ago) by vrnova
Original Path: trunk/Modules
ENH: minor GUI adjustment (reduce performance panel label width for different font/screen size)

Revision 9026 - Directory Listing
Modified Thu Apr 2 16:40:27 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: not refer to buttons that haven't yet been created

Revision 9025 - Directory Listing
Modified Wed Apr 1 20:52:12 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: updating previous and next checkpoint icons

Revision 9024 - Directory Listing
Modified Wed Apr 1 20:36:56 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding disabled version of checkpoint icon

Revision 9023 - Directory Listing
Modified Wed Apr 1 19:04:08 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: switch to Checkpoint naming scheme and add new icons

Revision 9022 - Directory Listing
Modified Wed Apr 1 19:03:23 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: change image names to match other icons

Revision 9020 - Directory Listing
Modified Wed Apr 1 15:54:36 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: icon for adding checkpoint

Revision 9019 - Directory Listing
Modified Wed Apr 1 15:48:09 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed incorrect threshold calculation for volume rendering


Revision 9018 - Directory Listing
Modified Wed Apr 1 15:35:13 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: new checkpoint icons for editor

Revision 9017 - Directory Listing
Modified Wed Apr 1 15:27:53 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: new checkpoint icons for editor

Revision 9016 - Directory Listing
Modified Wed Apr 1 14:27:49 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: fix the limitation of the input images to have VTK_SHORT scalar
type


Revision 9015 - Directory Listing
Modified Tue Mar 31 23:09:58 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed drift in IJK-RAS conversion for ROI selection


Revision 9014 - Directory Listing
Modified Tue Mar 31 22:15:59 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: fix typos and naming issues for Tractography

Revision 9013 - Directory Listing
Modified Tue Mar 31 18:17:19 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: enable 10 level undo/redo for editor

Revision 9012 - Directory Listing
Modified Tue Mar 31 17:44:53 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: made fiducial seeding pay attention to integration step parameter

Revision 9011 - Directory Listing
Modified Tue Mar 31 17:40:15 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: 151 fixed Undo/Redo and added it back into UI.
The problem was in Refrenceing nodes getting out of sync with scene nodes.

Revision 9007 - Directory Listing
Modified Mon Mar 30 17:11:09 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: add scrollbars to table

Revision 9006 - Directory Listing
Modified Mon Mar 30 15:35:02 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: add custom gui panel and progress for effect

Revision 9004 - Directory Listing
Modified Sun Mar 29 20:04:35 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk/Modules
BUG: add a check to prevent layout reset to FourUp on Slicer startup


Revision 9002 - Directory Listing
Modified Sun Mar 29 16:29:05 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: cleaning code

Revision 9001 - Directory Listing
Modified Sun Mar 29 14:16:11 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: renaming scripts

Revision 9000 - Directory Listing
Modified Sun Mar 29 14:00:45 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfix - screenshot issue

Revision 8999 - Directory Listing
Modified Sat Mar 28 16:46:48 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
COMP: ROISelect editor module removed at Lauren's request

Revision 8989 - Directory Listing
Modified Fri Mar 27 19:12:39 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: Added first draft of welcome module as per Ron's request

Revision 8988 - Directory Listing
Modified Fri Mar 27 16:58:43 2009 UTC (8 years, 6 months ago) by tokuda
Original Path: trunk/Modules
BUG: Slice orienting function -- avoid the problem that Slicer automatically switches slice orientation.

Revision 8986 - Directory Listing
Modified Fri Mar 27 14:42:56 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk/Modules
ENH: made default glyph spacing 5, performance improvements

Revision 8985 - Directory Listing
Modified Fri Mar 27 00:21:54 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: parse bugfix

Revision 8981 - Directory Listing
Modified Thu Mar 26 21:44:26 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: enable the IdentifyIsland effect

Revision 8980 - Directory Listing
Modified Thu Mar 26 18:33:00 2009 UTC (8 years, 6 months ago) by hliu
Original Path: trunk/Modules
ENH: added CenterImage().

Revision 8979 - Directory Listing
Modified Thu Mar 26 15:29:29 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: change Measurement to Measure to comply with the Westin published naming conventions

Revision 8978 - Directory Listing
Modified Thu Mar 26 15:28:10 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk/Modules
BUG: re-enable the IdentifyIslands effect to use new vtkITK code

Revision 8962 - Directory Listing
Modified Tue Mar 24 18:27:40 2009 UTC (8 years, 6 months ago) by vrnova
Original Path: trunk/Modules
ENH: Adjustment on initial rendering parameters for CPU ray casting.

Revision 8960 - Directory Listing
Modified Tue Mar 24 14:24:17 2009 UTC (8 years, 6 months ago) by vrnova
Original Path: trunk/Modules
BUG FIXED: incorrect MIP rendering result in GPU ray casting
ENH: Adjustment on initial rendering parameters

Revision 8959 - Directory Listing
Modified Tue Mar 24 13:40:51 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: clean for next version

Revision 8958 - Directory Listing
Modified Tue Mar 24 13:37:12 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: numpy files generator for multiprocessing version

Revision 8957 - Directory Listing
Modified Tue Mar 24 13:27:39 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: remove for fix

Revision 8956 - Directory Listing
Modified Tue Mar 24 13:27:21 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: remove for fix

Revision 8955 - Directory Listing
Modified Tue Mar 24 13:11:22 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: numpy support for multiprocessing

Revision 8954 - Directory Listing
Modified Tue Mar 24 13:10:40 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: numpy support for multiprocessing

Revision 8953 - Directory Listing
Modified Tue Mar 24 13:07:47 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: numpy support for multiprocessing

Revision 8952 - Directory Listing
Modified Tue Mar 24 13:07:39 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: numpy support for multiprocessing

Revision 8951 - Directory Listing
Modified Tue Mar 24 13:07:29 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: numpy support for multiprocessing

Revision 8945 - Directory Listing
Modified Mon Mar 23 19:38:44 2009 UTC (8 years, 6 months ago) by vrnova
Original Path: trunk/Modules
ENH: Code cleaning up. Fixed New() and Delete() paring. Minor GUI adjustment.

Revision 8943 - Directory Listing
Modified Mon Mar 23 16:38:19 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: fixed fiber display 

Revision 8942 - Directory Listing
Modified Mon Mar 23 15:10:02 2009 UTC (8 years, 6 months ago) by vrnova
Original Path: trunk/Modules
ENH: New VolumeRendering GUI and logic. Code cleaning up.

Revision 8941 - Directory Listing
Modified Mon Mar 23 15:00:54 2009 UTC (8 years, 6 months ago) by vrnova
Original Path: trunk/Modules
ENH: New VolumeRendering GUI and logic. Code cleaning up.

Revision 8940 - Directory Listing
Modified Mon Mar 23 14:58:22 2009 UTC (8 years, 6 months ago) by vrnova
Original Path: trunk/Modules
ENH: New VolumeRendering GUI and logic. Code cleaning up.

Revision 8939 - Directory Listing
Modified Mon Mar 23 14:54:50 2009 UTC (8 years, 6 months ago) by vrnova
Original Path: trunk/Modules
ENH: New VolumeRendering GUI and logic. Code cleaning up.

Revision 8936 - Directory Listing
Modified Mon Mar 23 03:33:46 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfixes + optimization

Revision 8935 - Directory Listing
Modified Mon Mar 23 03:09:23 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfixes + optimization

Revision 8934 - Directory Listing
Modified Sun Mar 22 17:28:37 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: code cleaning

Revision 8933 - Directory Listing
Modified Sun Mar 22 17:14:12 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfixes + speed optimization

Revision 8932 - Directory Listing
Modified Sun Mar 22 17:00:47 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfixes + speed optimization

Revision 8931 - Directory Listing
Modified Sun Mar 22 16:58:37 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfixes + speed optimization

Revision 8920 - Directory Listing
Modified Thu Mar 19 22:15:54 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: fix Edit Properties context menus to select the node after entering the module - models GUI still needs to be fixes to update model hierarchy and node selector correctly

Revision 8917 - Directory Listing
Modified Thu Mar 19 20:28:56 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: put tractograpy modules into correct category

Revision 8916 - Directory Listing
Modified Thu Mar 19 20:19:50 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
STYLE: fix indents

Revision 8915 - Directory Listing
Modified Thu Mar 19 19:44:58 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
ENH: fix module menu layout to match the documentation on the wiki

Revision 8914 - Directory Listing
Modified Thu Mar 19 19:43:10 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: tweaks to distance map fiducials (not currently being used)

Revision 8913 - Directory Listing
Modified Thu Mar 19 19:41:42 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: turn off progress meter to avoid update loop

Revision 8907 - Directory Listing
Modified Thu Mar 19 17:58:42 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
STYLE: extra comment

Revision 8906 - Directory Listing
Modified Thu Mar 19 17:54:49 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
STYLE: improved example for wizard

Revision 8905 - Directory Listing
Modified Thu Mar 19 17:53:46 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: work in progress fix to island operations upgrade

Revision 8903 - Directory Listing
Modified Thu Mar 19 16:02:10 2009 UTC (8 years, 7 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: made default volume rendering to be raycaster, only allow scalar volume selection.
Made Fiducial Seeding defaults as requested by JJ.

Revision 8902 - Directory Listing
Modified Wed Mar 18 16:08:07 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
ENH: clear output of filter

Revision 8900 - Directory Listing
Modified Wed Mar 18 00:14:23 2009 UTC (8 years, 7 months ago) by alexy
Original Path: trunk/Modules
ENH: added Line/Tube selection to Fiducial Seeding
BUG 475

Revision 8899 - Directory Listing
Modified Tue Mar 17 22:47:38 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed file io to have deformable metric working


Revision 8898 - Directory Listing
Modified Tue Mar 17 22:33:27 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
ENH: simplified


Revision 8895 - Directory Listing
Modified Tue Mar 17 15:55:29 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: install command line in Slicer/bin


Revision 8894 - Directory Listing
Modified Tue Mar 17 04:56:18 2009 UTC (8 years, 7 months ago) by jvs
Original Path: trunk/Modules
ENH: bugfix - installation

Revision 8891 - Directory Listing
Modified Mon Mar 16 19:48:54 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid crash when switching to model maker by delaying switch until after the editor gui has cleaned up and removed widgets.  Also switch to event broker

Revision 8889 - Directory Listing
Modified Mon Mar 16 18:18:42 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
STYLE: fix indent

Revision 8888 - Directory Listing
Modified Mon Mar 16 16:30:31 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: don't display PinOpen or GoToEditor when edit box is used as a widget

Revision 8880 - Directory Listing
Modified Sun Mar 15 19:34:32 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
ENH: namings for intermediate and analysis results revisited


Revision 8877 - Directory Listing
Modified Sat Mar 14 17:54:48 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: prevent slice offset reset when going to the ROI selection step


Revision 8876 - Directory Listing
Modified Fri Mar 13 18:30:29 2009 UTC (8 years, 7 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: 498 Handle overtire of exitsting track nodes

Revision 8875 - Directory Listing
Modified Fri Mar 13 17:24:30 2009 UTC (8 years, 7 months ago) by alexy
Original Path: trunk/Modules
ENH: performance optimization for FiducalSeeding

Revision 8874 - Directory Listing
Modified Fri Mar 13 14:27:03 2009 UTC (8 years, 7 months ago) by vrnova
Original Path: trunk/Modules
ENH: minor update on volume rendering module GUI

Revision 8869 - Directory Listing
Modified Wed Mar 11 19:27:45 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed execution with non-ITK registration


Revision 8863 - Directory Listing
Modified Wed Mar 11 15:19:46 2009 UTC (8 years, 7 months ago) by alexy
Original Path: trunk/Modules
ENH: initialize fiber display UI

Revision 8862 - Directory Listing
Modified Tue Mar 10 22:01:14 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
ENH: use label layer for displaying segmentation and analysis results


Revision 8861 - Directory Listing
Modified Tue Mar 10 17:56:09 2009 UTC (8 years, 7 months ago) by alexy
Original Path: trunk/Modules
ENH: reworked fiber bundle display using tabs, add scalar col,or visibility

Revision 8855 - Directory Listing
Modified Mon Mar 9 02:16:11 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: fixing remote UL/DL for multi-volume, fiducials, freesurfer data

Revision 8848 - Directory Listing
Modified Sun Mar 8 00:36:51 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: module output redirection back to normal


Revision 8845 - Directory Listing
Modified Fri Mar 6 16:27:20 2009 UTC (8 years, 7 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: 458
Update Window level /threshold when changing tensor scalar selection


Revision 8839 - Directory Listing
Modified Thu Mar 5 01:47:30 2009 UTC (8 years, 7 months ago) by tokuda
Original Path: trunk/Modules
BUG: default window/level calculation.

Revision 8838 - Directory Listing
Modified Wed Mar 4 22:33:07 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: removed unnecessary dependency on EMSegmenter


Revision 8837 - Directory Listing
Modified Wed Mar 4 22:09:09 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixed add new tag and toplevel behavior

Revision 8836 - Directory Listing
Modified Wed Mar 4 21:44:08 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed another memory leak


Revision 8834 - Directory Listing
Modified Wed Mar 4 20:12:02 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: setting server on node if server is null (not yet set) or changed

Revision 8833 - Directory Listing
Modified Wed Mar 4 19:55:18 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixed and exposed the AddNewServer functionality

Revision 8832 - Directory Listing
Modified Wed Mar 4 17:14:30 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: regrouped icons for clarity (address Ron's comment that the main functionality was not clear enough)

Revision 8829 - Directory Listing
Modified Wed Mar 4 01:41:50 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: addressing unused variable warning on Dashboard

Revision 8828 - Directory Listing
Modified Tue Mar 3 21:56:58 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding help, modifying logic to import new scene instead of close out old by default

Revision 8822 - Directory Listing
Modified Mon Mar 2 21:00:37 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
ENH: extra check of the image data


Revision 8821 - Directory Listing
Modified Mon Mar 2 20:52:02 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: disabling output redirect trying to catch bug #440


Revision 8820 - Directory Listing
Modified Mon Mar 2 18:27:03 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
STYLE: moved the Category instance variable to the vtkSlicerModuleGUI

Revision 8818 - Directory Listing
Modified Mon Mar 2 17:45:41 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixing popup and focus behavior or wait message and adding acknowledgement logos

Revision 8816 - Directory Listing
Modified Mon Mar 2 17:21:58 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
COMP: workflow engine code moved to na-mic sandbox (http://svn.na-mic.org/NAMICSandBox/trunk/WFEngineModule)

Revision 8813 - Directory Listing
Modified Mon Mar 2 16:31:09 2009 UTC (8 years, 7 months ago) by millerjv
Original Path: trunk/Modules
ENH: allow <image> parameters to be hidden

Revision 8810 - Directory Listing
Modified Mon Mar 2 14:28:33 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
COMP: avoid warnings when building python (avoid mismatch betweent the way Python defines _LARGEFILE_SOURCE compared to the way kwsys defines it

Revision 8803 - Directory Listing
Modified Mon Mar 2 02:29:50 2009 UTC (8 years, 7 months ago) by millerjv
Original Path: trunk/Modules
ENH: Added an "Index" to Modules to facilitate module list order within a category (menu).  Modules within a category are now sorted by index and then by name. Builtin modules can override the method GetIndex() to prescribe a position. Command line modules can use the <index> tag to indicate an order.  Modules with an index are always displayed before modules without an index (default index is the maximum value of a short, i.e. the last position).




Revision 8802 - Directory Listing
Modified Mon Mar 2 01:43:50 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: added wait widget, changed to tab format, cleaning up dashboard warnings

Revision 8797 - Directory Listing
Modified Sun Mar 1 20:19:10 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: disable distance transform model module due to bugs and disuse

Revision 8796 - Directory Listing
Modified Sun Mar 1 19:03:10 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
COMP: fix method name and STYLE: change Parameterset to Parameter Set in GUI

Revision 8795 - Directory Listing
Modified Sun Mar 1 18:50:25 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
STYLE: change methods from Parameterset to ParameterSet

Revision 8794 - Directory Listing
Modified Sun Mar 1 18:49:03 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: use double rather than int to store the min and max of the volume.  Also COMP: fix warnings

Revision 8793 - Directory Listing
Modified Sun Mar 1 18:45:50 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
COMP: fix warning

Revision 8792 - Directory Listing
Modified Sun Mar 1 18:45:21 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
COMP: fix warnings

Revision 8791 - Directory Listing
Modified Sun Mar 1 18:44:36 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
COMP: fix warnings

Revision 8789 - Directory Listing
Modified Sun Mar 1 02:57:57 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: calling UpdateFileList on remote upload operations, and fixing upload for storage nodes that have no files in the fileNameList.

Revision 8785 - Directory Listing
Modified Sun Mar 1 02:22:35 2009 UTC (8 years, 7 months ago) by tgl
Original Path: trunk/Modules
ENH no longer used

Revision 8768 - Directory Listing
Modified Fri Feb 27 18:16:49 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed uninitialized pointer and added extra check; should take care of bug 440


Revision 8765 - Directory Listing
Modified Thu Feb 26 23:14:40 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: addressing linux compile warning in the code

Revision 8763 - Directory Listing
Modified Thu Feb 26 22:56:48 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: set default paint size to 5mm per user request

Revision 8762 - Directory Listing
Modified Thu Feb 26 22:42:00 2009 UTC (8 years, 7 months ago) by naucoin
Original Path: trunk/Modules
COMP: unused vars

Revision 8761 - Directory Listing
Modified Thu Feb 26 22:38:28 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: fix typos and display/tooltip issues in GUI

Revision 8759 - Directory Listing
Modified Thu Feb 26 22:21:26 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: trying to fix the mac crash


Revision 8758 - Directory Listing
Modified Thu Feb 26 21:13:58 2009 UTC (8 years, 7 months ago) by naucoin
Original Path: trunk/Modules
COMP: commenting out unused vars, fixing scoping

Revision 8756 - Directory Listing
Modified Thu Feb 26 20:08:09 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: deleting the file I meant to delete before

Revision 8755 - Directory Listing
Modified Thu Feb 26 20:06:00 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: oops, deleted by mistake. adding back

Revision 8752 - Directory Listing
Modified Thu Feb 26 19:04:53 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: adding modular webservices client stuff

Revision 8751 - Directory Listing
Modified Thu Feb 26 19:03:13 2009 UTC (8 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: cleaning up old files.

Revision 8749 - Directory Listing
Modified Thu Feb 26 14:34:58 2009 UTC (8 years, 7 months ago) by tokuda
Original Path: trunk/Modules
BUG: Disabled Emergency phase (Transition to this phase causes segmentation fault, since it hasn't been implemented.)

Revision 8747 - Directory Listing
Modified Wed Feb 25 20:16:28 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
STYLE: ChangeTracker is now in Wizards category sub-menu


Revision 8746 - Directory Listing
Modified Wed Feb 25 19:58:24 2009 UTC (8 years, 7 months ago) by naucoin
Original Path: trunk/Modules
BUG: filled in missing categories

Revision 8743 - Directory Listing
Modified Wed Feb 25 16:31:21 2009 UTC (8 years, 7 months ago) by naucoin
Original Path: trunk/Modules
BUG: use File->Save to save volumes instead

Revision 8741 - Directory Listing
Modified Tue Feb 24 16:46:59 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: targets related to deformable metric were not installed correctly


Revision 8740 - Directory Listing
Modified Tue Feb 24 15:24:06 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: memory leak


Revision 8732 - Directory Listing
Modified Mon Feb 23 17:50:51 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed memory leak


Revision 8731 - Directory Listing
Modified Mon Feb 23 17:00:32 2009 UTC (8 years, 7 months ago) by clisle
Original Path: trunk/Modules
ENH: moving IA_FEMesh to Meshing category on Slicer Module menu

Revision 8730 - Directory Listing
Modified Mon Feb 23 16:16:00 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: memory leaks


Revision 8729 - Directory Listing
Modified Mon Feb 23 15:49:07 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: unnecessary Delete() 


Revision 8728 - Directory Listing
Modified Mon Feb 23 14:56:14 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: revert to r8701 


Revision 8725 - Directory Listing
Modified Sun Feb 22 18:03:57 2009 UTC (8 years, 7 months ago) by hliu
Original Path: trunk/Modules
ENH: updated the Help frame.

Revision 8724 - Directory Listing
Modified Sun Feb 22 00:22:24 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: memory leak only; previous changes are troublesome


Revision 8723 - Directory Listing
Modified Sat Feb 21 23:51:25 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixing memory leaks ENH: added transforms to MRML node


Revision 8722 - Directory Listing
Modified Sat Feb 21 23:40:28 2009 UTC (8 years, 7 months ago) by jvs
Original Path: trunk/Modules
ENH: parallel version

Revision 8715 - Directory Listing
Modified Fri Feb 20 18:24:19 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: fix incorrect offset during rasterizing (bugg 442)

Revision 8714 - Directory Listing
Modified Fri Feb 20 17:25:21 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: turn off display of 'little boxes' in the histogram widget since grabbing them could cause a crash in certain circumstances

Revision 8707 - Directory Listing
Modified Thu Feb 19 21:25:56 2009 UTC (8 years, 7 months ago) by pieper
Original Path: trunk/Modules
BUG: fix error that lead to leak

Revision 8701 - Directory Listing
Modified Thu Feb 19 14:32:35 2009 UTC (8 years, 7 months ago) by fedorov
Original Path: trunk/Modules
BUG: added checks for Volumes module (dependency) and error reporting


Revision 8700 - Directory Listing
Modified Thu Feb 19 05:39:40 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: clean code

Revision 8699 - Directory Listing
Modified Thu Feb 19 05:39:32 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: clean code

Revision 8698 - Directory Listing
Modified Thu Feb 19 04:39:14 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
STYLE: removed dead section of code


Revision 8697 - Directory Listing
Modified Thu Feb 19 03:45:50 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: clean code

Revision 8696 - Directory Listing
Modified Thu Feb 19 03:29:51 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: clean code

Revision 8695 - Directory Listing
Modified Thu Feb 19 02:36:49 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: clean code

Revision 8694 - Directory Listing
Modified Thu Feb 19 00:30:21 2009 UTC (8 years, 8 months ago) by tokuda
Original Path: trunk/Modules
BUG: Fixed the problem that ImageDataModifiedEvent is invoked twice.

Revision 8693 - Directory Listing
Modified Wed Feb 18 22:30:52 2009 UTC (8 years, 8 months ago) by naucoin
Original Path: trunk/Modules
COMP: uninit var warning

Revision 8692 - Directory Listing
Modified Wed Feb 18 22:26:39 2009 UTC (8 years, 8 months ago) by naucoin
Original Path: trunk/Modules
COMP: unused var

Revision 8691 - Directory Listing
Modified Wed Feb 18 21:54:38 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: avoid crash on multi-core machine (copy of patch applied to C++ CLI)

Revision 8687 - Directory Listing
Modified Wed Feb 18 16:50:20 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: do link slices


Revision 8684 - Directory Listing
Modified Wed Feb 18 16:19:17 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
STYLE: fixed wizard step descriptions to be uniform


Revision 8683 - Directory Listing
Modified Wed Feb 18 15:58:43 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: fix Wand icon creation

Revision 8682 - Directory Listing
Modified Wed Feb 18 14:33:42 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: (hopefully, BUG fix) rewrote command line module invocation
to avoid GUI construction. This required changes to the way compareview
is initialized.


Revision 8681 - Directory Listing
Modified Wed Feb 18 14:16:09 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: disable Wand effect due to problems rasterizing the output of vtkMarchingSquares

Revision 8680 - Directory Listing
Modified Wed Feb 18 14:15:15 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: fix (mostly) coordinate system of wand tool and generate outlines

Revision 8679 - Directory Listing
Modified Wed Feb 18 14:14:31 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: move polygon completion code from Labeler to Draw since it is specific to the draw tool

Revision 8678 - Directory Listing
Modified Wed Feb 18 13:54:43 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: fix undo for Draw and other label operations

Revision 8677 - Directory Listing
Modified Wed Feb 18 01:06:29 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: clean code

Revision 8670 - Directory Listing
Modified Tue Feb 17 14:03:38 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: getting rid of warnings reported on Dashboard

Revision 8656 - Directory Listing
Modified Mon Feb 16 21:12:10 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: modularizing code and fixing remoteIO bug

Revision 8655 - Directory Listing
Modified Mon Feb 16 21:12:09 2009 UTC (8 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH: added help and about pages. Fixed loading man made MRML scene with partial volume information

Revision 8654 - Directory Listing
Modified Mon Feb 16 21:11:27 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: modularizing architecture and fixing remoteIO bug

Revision 8653 - Directory Listing
Modified Mon Feb 16 20:58:49 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: code clean

Revision 8652 - Directory Listing
Modified Mon Feb 16 20:58:43 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: code clean

Revision 8651 - Directory Listing
Modified Mon Feb 16 20:58:37 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: code clean

Revision 8650 - Directory Listing
Modified Mon Feb 16 20:58:32 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: code clean

Revision 8649 - Directory Listing
Modified Mon Feb 16 20:58:25 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: code clean

Revision 8648 - Directory Listing
Modified Mon Feb 16 20:58:19 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: code clean

Revision 8647 - Directory Listing
Modified Mon Feb 16 20:58:06 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: code clean

Revision 8646 - Directory Listing
Modified Mon Feb 16 20:54:30 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: code clean

Revision 8645 - Directory Listing
Modified Mon Feb 16 20:45:43 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: code clean

Revision 8640 - Directory Listing
Modified Sat Feb 14 19:46:38 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: bins are not plugins


Revision 8639 - Directory Listing
Modified Sat Feb 14 18:25:05 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: null pointer check (relevant on scene close)


Revision 8638 - Directory Listing
Modified Fri Feb 13 23:32:36 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: apparently, rendering now has to be explicitly requested; 
this was not the case before


Revision 8634 - Directory Listing
Modified Fri Feb 13 17:11:08 2009 UTC (8 years, 8 months ago) by naucoin
Original Path: trunk/Modules
STYLE: point to the 3.4 docs

Revision 8630 - Directory Listing
Modified Thu Feb 12 21:22:26 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: fixes to python internals to support scripted wizards

Revision 8626 - Directory Listing
Modified Thu Feb 12 13:18:36 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: add directory to avoid error at packaging time

Revision 8625 - Directory Listing
Modified Wed Feb 11 22:48:16 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: first pass of python and numpy builds from source (fixes but that they weren't building before).  Still turned off by default until more testing is done

Revision 8624 - Directory Listing
Modified Wed Feb 11 22:40:22 2009 UTC (8 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: Added in missing test script

Revision 8622 - Directory Listing
Modified Wed Feb 11 20:39:05 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: changing MRML node name was probably not a good idea -- 
keep the original naming for backward compatibility


Revision 8619 - Directory Listing
Modified Wed Feb 11 14:08:53 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: corrected MRML node tag


Revision 8617 - Directory Listing
Modified Tue Feb 10 22:46:52 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: change to use band-pass filter for rendering -- more consistent
results


Revision 8615 - Directory Listing
Modified Tue Feb 10 21:29:41 2009 UTC (8 years, 8 months ago) by nicky
Original Path: trunk/Modules
BUG:fix bug that volume rendering cuda doesn't update transformation 
matrix from OpenIGTLink


Revision 8614 - Directory Listing
Modified Tue Feb 10 00:59:28 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed initialization issue of the ROI widget


Revision 8613 - Directory Listing
Modified Tue Feb 10 00:22:13 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: updated documentation pointer


Revision 8612 - Directory Listing
Modified Mon Feb 9 23:54:51 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
STYLE: removed cout


Revision 8610 - Directory Listing
Modified Mon Feb 9 21:51:38 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
STYLE: typo


Revision 8609 - Directory Listing
Modified Mon Feb 9 21:48:05 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: set working dir to Slicer temp dir


Revision 8608 - Directory Listing
Modified Mon Feb 9 21:34:02 2009 UTC (8 years, 8 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: update window/level/threshold on auto switch

Revision 8607 - Directory Listing
Modified Mon Feb 9 20:19:26 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: command line module should not be installed as plugin


Revision 8603 - Directory Listing
Modified Mon Feb 9 15:40:37 2009 UTC (8 years, 8 months ago) by tokuda
Original Path: trunk/Modules
BUG: Fixed bug where VolumeRenderingCuda doesn't update the real-time image updated by OpenIGTLink. Suggested by Nicholas Herlambang.

Revision 8597 - Directory Listing
Modified Sun Feb 8 15:46:18 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixing memory leaks when exiting after global registration


Revision 8594 - Directory Listing
Modified Sat Feb 7 20:57:10 2009 UTC (8 years, 8 months ago) by lorensen
Original Path: trunk/Modules
ENH: Include documentation-url in the Help section of the GUI.

Revision 8591 - Directory Listing
Modified Fri Feb 6 21:28:32 2009 UTC (8 years, 8 months ago) by clisle
Original Path: trunk/Modules
ENH: Added feature to automatically turn off visibility for finite element surfaces, bblocks, and meshes when not in the IA_FEMesh module.  Object visibility is restored to previous state when returning to the module. 

Revision 8590 - Directory Listing
Modified Fri Feb 6 18:48:05 2009 UTC (8 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH: performance optimization for volume display

Revision 8588 - Directory Listing
Modified Fri Feb 6 13:19:38 2009 UTC (8 years, 8 months ago) by vrnova
Original Path: trunk/Modules
ENH: allow user to turn off adaptive framerate control for best image quality.

Revision 8587 - Directory Listing
Modified Fri Feb 6 13:19:25 2009 UTC (8 years, 8 months ago) by vrnova
Original Path: trunk/Modules
ENH: allow user to turn off adaptive framerate control for best image quality.

Revision 8584 - Directory Listing
Modified Fri Feb 6 06:22:18 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: minor fix

Revision 8583 - Directory Listing
Modified Fri Feb 6 06:21:36 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: minor fix

Revision 8582 - Directory Listing
Modified Fri Feb 6 03:44:59 2009 UTC (8 years, 8 months ago) by hayes
Original Path: trunk/Modules
BUG: Typo in CMakeLists.txt

Revision 8579 - Directory Listing
Modified Thu Feb 5 21:57:58 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: making changes to get rid of build warnings on dashboard

Revision 8578 - Directory Listing
Modified Thu Feb 5 20:21:23 2009 UTC (8 years, 8 months ago) by hliu
Original Path: trunk/Modules
BUG: check the modelNode before we use it.

Revision 8577 - Directory Listing
Modified Thu Feb 5 19:51:40 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: setting options for full output...still


Revision 8576 - Directory Listing
Modified Thu Feb 5 19:26:00 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: ctest is still not giving the full output!


Revision 8575 - Directory Listing
Modified Thu Feb 5 19:11:33 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: an easy fix to eliminate memory leaks


Revision 8574 - Directory Listing
Modified Thu Feb 5 19:10:18 2009 UTC (8 years, 8 months ago) by tokuda
Original Path: trunk/Modules
BUG: include vtkProstateNavWin32Header.h

Revision 8573 - Directory Listing
Modified Thu Feb 5 19:04:09 2009 UTC (8 years, 8 months ago) by tokuda
Original Path: trunk/Modules
COMP: fixed dll export problem

Revision 8572 - Directory Listing
Modified Thu Feb 5 18:50:21 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: modifications to address warnings from dashboard

Revision 8569 - Directory Listing
Modified Thu Feb 5 17:54:29 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: fix smoothing

Revision 8568 - Directory Listing
Modified Thu Feb 5 17:54:06 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: fix smoothing

Revision 8567 - Directory Listing
Modified Thu Feb 5 17:53:58 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: fix smoothing

Revision 8564 - Directory Listing
Modified Thu Feb 5 16:25:31 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: getting rid of signed unsigned int comparisons causing dashboard warnings

Revision 8560 - Directory Listing
Modified Thu Feb 5 13:38:56 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: got rid of unused variable causing Build warnings

Revision 8558 - Directory Listing
Modified Thu Feb 5 11:58:35 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: fixing for scoping bug reported on dashboard

Revision 8557 - Directory Listing
Modified Thu Feb 5 05:05:59 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: relocate

Revision 8556 - Directory Listing
Modified Thu Feb 5 05:02:49 2009 UTC (8 years, 8 months ago) by jvs
Original Path: trunk/Modules
ENH: relocate

Revision 8555 - Directory Listing
Modified Wed Feb 4 23:36:50 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed incompatible "exec date" (thanks, Steve!)


Revision 8554 - Directory Listing
Modified Wed Feb 4 23:07:25 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: exposing FetchMI to build

Revision 8550 - Directory Listing
Modified Wed Feb 4 22:56:56 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: new FetchMI functionality: still has debug leaks and needs some work

Revision 8549 - Directory Listing
Modified Wed Feb 4 22:53:06 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
BUG: commented out bug block, probably a copy and paste error

Revision 8548 - Directory Listing
Modified Wed Feb 4 22:52:06 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: new resources for fetchMI icons

Revision 8547 - Directory Listing
Modified Wed Feb 4 22:51:28 2009 UTC (8 years, 8 months ago) by wjp@bwh.harvard.edu
Original Path: trunk/Modules
ENH: new image data for FetchMI

Revision 8542 - Directory Listing
Modified Wed Feb 4 22:26:09 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
COMP: remove filter that relies on scipy

Revision 8538 - Directory Listing
Modified Wed Feb 4 19:17:34 2009 UTC (8 years, 8 months ago) by hliu
Original Path: trunk/Modules
ENH: added ProstateNav module.

Revision 8537 - Directory Listing
Modified Wed Feb 4 19:15:57 2009 UTC (8 years, 8 months ago) by hliu
Original Path: trunk/Modules
ENH: added ProstateNav module.

Revision 8536 - Directory Listing
Modified Wed Feb 4 18:32:40 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
ENH: put modules into new IGT category

Revision 8532 - Directory Listing
Modified Wed Feb 4 16:32:21 2009 UTC (8 years, 8 months ago) by clisle
Original Path: trunk/Modules
BUG: removed crash of IA_FEMesh module when mesh clipping plane was not disabled before menu exit. Reduced size of plane widget handles.  

Revision 8527 - Directory Listing
Modified Wed Feb 4 01:48:19 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: ROI selection in IJK space is included for backwards compatibility


Revision 8513 - Directory Listing
Modified Tue Feb 3 19:46:53 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: fix leak by deleting newly create storage node

Revision 8511 - Directory Listing
Modified Tue Feb 3 19:25:05 2009 UTC (8 years, 8 months ago) by vmagnotta
Original Path: trunk/Modules
BUG: Fixed the link to the IA-Mesh documentation on the Slicer Wiki


Revision 8510 - Directory Listing
Modified Tue Feb 3 19:14:12 2009 UTC (8 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH: volume rendering mrml nodes

Revision 8507 - Directory Listing
Modified Tue Feb 3 17:48:03 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
ENH: work-in-progress wand improvements - still needs correct transform from extracted visible slice to window coordinates for outline preview and rasterizing

Revision 8504 - Directory Listing
Modified Tue Feb 3 14:03:47 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: correct initialization of range extents in ROI selection


Revision 8499 - Directory Listing
Modified Mon Feb 2 19:37:08 2009 UTC (8 years, 8 months ago) by vmagnotta
Original Path: trunk/Modules
COMP: Added the help and about text to the module. This was
requested by Ron in his latest e-mail.


Revision 8496 - Directory Listing
Modified Mon Feb 2 16:20:59 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: Added CTest directive not to truncate console output. EXIT_SUCCESS
is enabled now


Revision 8494 - Directory Listing
Modified Mon Feb 2 15:11:33 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: ignoring rigid registration error no more


Revision 8492 - Directory Listing
Modified Fri Jan 30 18:28:56 2009 UTC (8 years, 8 months ago) by hliu
Original Path: trunk/Modules
ENH: added vtkErrorMacro.

Revision 8490 - Directory Listing
Modified Fri Jan 30 17:34:11 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed initialization and updates of ROI render


Revision 8489 - Directory Listing
Modified Fri Jan 30 17:24:09 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: need to poke ROI node to reset viewer center


Revision 8488 - Directory Listing
Modified Fri Jan 30 16:14:57 2009 UTC (8 years, 8 months ago) by alexy
Original Path: trunk/Modules
BUG-FIXED: 373, fixed references reading in TensorImageNode attributes

Revision 8487 - Directory Listing
Modified Fri Jan 30 15:29:59 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: substituted custom ROI controls with SlicerROIDisplayWidget; 3d
viewer center of rotation is now automatically set to the center of the
ROI 3d box


Revision 8480 - Directory Listing
Modified Tue Jan 27 21:54:32 2009 UTC (8 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH: speedup switching volume display widgets for different volume types

Revision 8479 - Directory Listing
Modified Tue Jan 27 21:10:00 2009 UTC (8 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH: speedup switching volume display widgets for different volume types

Revision 8476 - Directory Listing
Modified Tue Jan 27 19:15:43 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect test parameters


Revision 8475 - Directory Listing
Modified Tue Jan 27 03:52:56 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: output redirection doesn't work on Windows; changed the CL module
to always fail to be able to get output on the dashboard


Revision 8474 - Directory Listing
Modified Tue Jan 27 00:07:06 2009 UTC (8 years, 8 months ago) by naucoin
Original Path: trunk/Modules
ENH: add progress

Revision 8473 - Directory Listing
Modified Mon Jan 26 23:55:48 2009 UTC (8 years, 8 months ago) by naucoin
Original Path: trunk/Modules
BUG: properly deal with the case where the user doesn't set a label volume name

Revision 8472 - Directory Listing
Modified Mon Jan 26 23:48:53 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: suppress registration progress output


Revision 8471 - Directory Listing
Modified Mon Jan 26 23:25:53 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed retrieval of Slicer3 path, didn't work on windows


Revision 8470 - Directory Listing
Modified Mon Jan 26 22:19:42 2009 UTC (8 years, 8 months ago) by naucoin
Original Path: trunk/Modules
ENH: moved the intersection code into Logic for testing ease. Added a subdivide option to get a model with more vertices

Revision 8469 - Directory Listing
Modified Mon Jan 26 13:29:07 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: removed console output


Revision 8468 - Directory Listing
Modified Mon Jan 26 13:15:17 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
COMP: warning


Revision 8467 - Directory Listing
Modified Mon Jan 26 01:04:53 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: added dynamic ROI volume rendering


Revision 8466 - Directory Listing
Modified Sun Jan 25 18:30:27 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: changing main() signature to fix the Windows compilation bug
(thanks, Bill!!!)


Revision 8463 - Directory Listing
Modified Sat Jan 24 04:57:54 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: incorrect dependency name


Revision 8462 - Directory Listing
Modified Fri Jan 23 23:42:08 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: Added full test of the intensity-based ChangeTracker workflow


Revision 8461 - Directory Listing
Modified Fri Jan 23 23:31:45 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: Testing for ChangeTracker


Revision 8460 - Directory Listing
Modified Fri Jan 23 23:12:21 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: Full integration of ROI selection with scales/slice views/ROI
widget


Revision 8458 - Directory Listing
Modified Fri Jan 23 22:29:09 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: added pulse rendering filter for analysis visualization


Revision 8457 - Directory Listing
Modified Fri Jan 23 22:23:49 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
COMP: warning removed


Revision 8455 - Directory Listing
Modified Fri Jan 23 21:28:33 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
ENH: new editor functionaltiy work-in-progress

Revision 8448 - Directory Listing
Modified Fri Jan 23 12:30:24 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
COMP: fix warnings and leaks

Revision 8444 - Directory Listing
Modified Thu Jan 22 19:58:18 2009 UTC (8 years, 8 months ago) by hliu
Original Path: trunk/Modules
ENH: support fiducial seeding for tractography.

Revision 8441 - Directory Listing
Modified Thu Jan 22 15:17:24 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: no plugin installation for DiameterEstimator


Revision 8440 - Directory Listing
Modified Thu Jan 22 14:58:48 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: corrected setting foreground opacity using CompositeSliceNode
instead of direct manipulation with FadeScale


Revision 8439 - Directory Listing
Modified Thu Jan 22 01:18:10 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: missed initialization


Revision 8438 - Directory Listing
Modified Wed Jan 21 21:22:45 2009 UTC (8 years, 8 months ago) by hliu
Original Path: trunk/Modules
ENH: support fiducial seeding for tractography.

Revision 8437 - Directory Listing
Modified Wed Jan 21 18:50:26 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: foreground selection via SliceCompositeNode


Revision 8436 - Directory Listing
Modified Wed Jan 21 18:42:25 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixed setting of the foreground from using GUI to
SliceCompositeNode


Revision 8433 - Directory Listing
Modified Wed Jan 21 00:34:40 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: removed console output


Revision 8424 - Directory Listing
Modified Tue Jan 20 22:42:36 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: fixing some warnings


Revision 8421 - Directory Listing
Modified Tue Jan 20 22:38:55 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
ENH: print result from test

Revision 8420 - Directory Listing
Modified Tue Jan 20 22:34:51 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
ENH: new widget classes for vectors

Revision 8419 - Directory Listing
Modified Tue Jan 20 22:30:16 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
ENH: vector volume display improvements and typo fixes

Revision 8417 - Directory Listing
Modified Tue Jan 20 21:30:19 2009 UTC (8 years, 8 months ago) by alexy
Original Path: trunk/Modules
ENH: added VolumeProperty Storage and Parameters nodes

Revision 8414 - Directory Listing
Modified Tue Jan 20 16:26:52 2009 UTC (8 years, 8 months ago) by pieper
Original Path: trunk/Modules
BUG: check for null pointer when desconstructing

Revision 8413 - Directory Listing
Modified Tue Jan 20 16:23:17 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
ENH: more integration of ROI widget -- widget->roi binding complete;
visualization disabled, no visual changes


Revision 8412 - Directory Listing
Modified Tue Jan 20 13:33:50 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: Added library install


Revision 8411 - Directory Listing
Modified Tue Jan 20 13:31:12 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: missed *Lib in target definition!


Revision 8410 - Directory Listing
Modified Tue Jan 20 13:15:33 2009 UTC (8 years, 8 months ago) by fedorov
Original Path: trunk/Modules
BUG: added vtkCommon to hopefully fix the Mac build problem


Revision 8409 - Directory Listing
Modified Mon Jan 19 22:26:16 2009 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk/Modules
ENH: Adding ROI widget, roi->roi widget integration done; visualization
disabled until feature complete


Revision 8406 - Directory Listing
Modified Mon Jan 19 02:22:17 2009 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk/Modules
ENH: Adding standard testing 


Revision 8405 - Directory Listing
Modified Mon Jan 19 02:19:36 2009 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk/Modules
ENH: Restructuring command line application to use Rigid registration
module, and be in agreement with the testing framework


Revision 8403 - Directory Listing
Modified Fri Jan 16 23:35:57 2009 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk/Modules
BUG: restoring ChangeTracker

Revision 8402 - Directory Listing
Modified Fri Jan 16 23:34:22 2009 UTC (8 years, 9 months ago) by naucoin
Original Path: trunk/Modules
ENH: adding a scripted module to intersect a model with a reference volume and produce a label map volume. Documentation and testing TBD

Revision 8394 - Directory Listing
Modified Thu Jan 15 19:41:25 2009 UTC (8 years, 9 months ago) by vrnova
Original Path: trunk/Modules
ENH: User with powerful graphics card can now select to use large volume size for better rendering quality. Minor clean up in GPU mapper.

Revision 8390 - Directory Listing
Modified Wed Jan 14 21:54:23 2009 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk/Modules
BUG: potential memory leaks.

Revision 8388 - Directory Listing
Modified Wed Jan 14 19:07:46 2009 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk/Modules
ENH: Starting to add ChangeTracker tests


Revision 8387 - Directory Listing
Modified Wed Jan 14 18:52:57 2009 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk/Modules
BUG: lots of memory leaks.

Revision 8381 - Directory Listing
Modified Wed Jan 14 17:00:36 2009 UTC (8 years, 9 months ago) by vrnova
Original Path: trunk/Modules
ENH: better performance control. Clamping maximum ray traversal steps.

Revision 8380 - Directory Listing
Modified Wed Jan 14 15:37:24 2009 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk/Modules
BUG: Bad logic for removing actors.


Revision 8379 - Directory Listing
Modified Wed Jan 14 15:36:52 2009 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk/Modules
BUG: MeshinUI was not initialized in constructor.

Revision 8378 - Directory Listing
Modified Wed Jan 14 03:12:24 2009 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk/Modules
BUG: Volume rendering for deformable analysis was not initialized
properly for multi-color view


Revision 8377 - Directory Listing
Modified Wed Jan 14 02:05:22 2009 UTC (8 years, 9 months ago) by clisle
Original Path: trunk/Modules
BUG: fixed Slicer crash on exit due to IA-FEMesh not releasing the RenderWidget. 

Revision 8376 - Directory Listing
Modified Wed Jan 14 00:45:06 2009 UTC (8 years, 9 months ago) by clisle
Original Path: trunk/Modules
ENH: removing debug print in raycast renderer

Revision 8374 - Directory Listing
Modified Tue Jan 13 23:03:53 2009 UTC (8 years, 9 months ago) by clisle
Original Path: trunk/Modules
BUG: added clamp to raysteps in Raycast algorithm to prevent volumes from disappearing.  Clamp values need to be refined, but this keeps Slicer working for various volumes in the meantime. 

Revision 8373 - Directory Listing
Modified Tue Jan 13 20:15:44 2009 UTC (8 years, 9 months ago) by clisle
Original Path: trunk/Modules
ENH: cleaning up the IA_FEMesh GUI teardown.  

Revision 8369 - Directory Listing
Modified Tue Jan 13 14:28:51 2009 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk/Modules
BUG: switching back to FourUpView when not in the analysis mode.
Increased number of columns in CompareView.


Revision 8366 - Directory Listing
Modified Tue Jan 13 13:31:09 2009 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk/Modules
BUG: vtkEventBroker::GetInstance()->Delete() must be done after any other calls that may process events.

Revision 8364 - Directory Listing
Modified Mon Jan 12 23:10:04 2009 UTC (8 years, 9 months ago) by fedorov
Original Path: trunk/Modules
ENH: Added CompareView layout setup in the analysis step


Revision 8363 - Directory Listing
Modified Mon Jan 12 21:51:28 2009 UTC (8 years, 9 months ago) by pieper
Original Path: trunk/Modules
BUG: re-enable the interactive software raycast mode

Revision 8360 - Directory Listing
Modified Mon Jan 12 19:52:16 2009 UTC (8 years, 9 months ago) by vrnova
Original Path: trunk/Modules
ENH: volume rendering module GUI clean up

Revision 8359 - Directory Listing
Modified Mon Jan 12 19:27:21 2009 UTC (8 years, 9 months ago) by vrnova
Original Path: trunk/Modules
ENH: Updated GPU ray cast mapper for better quality at user specified framerate

Revision 8358 - Directory Listing
Modified Mon Jan 12 19:25:29 2009 UTC (8 years, 9 months ago) by vrnova
Original Path: trunk/Modules
ENH: VolumeRendering module GUI clean up

Revision 8356 - Directory Listing
Modified Mon Jan 12 17:39:55 2009 UTC (8 years, 9 months ago) by lorensen
Original Path: trunk/Modules
BUGU: improper use of vtkSmartPointer.

Revision