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Revision 10887  Directory Listing
Modified Fri Nov 6 15:33:23 2009 UTC (7 years, 10 months ago) by wjp@bwh.harvard.edu
ENH: added bw qualifier to SUV labels

Revision 10886  Directory Listing
Modified Fri Nov 6 15:13:41 2009 UTC (7 years, 10 months ago) by wjp@bwh.harvard.edu
BUG: added decay correction to the dose calcluation

Revision 10874  Directory Listing
Modified Wed Nov 4 17:58:01 2009 UTC (7 years, 10 months ago) by wjp@bwh.harvard.edu
BUG: deleting labels

Revision 10873  Directory Listing
Modified Wed Nov 4 17:52:57 2009 UTC (7 years, 10 months ago) by wjp@bwh.harvard.edu
ENH: added changes suggested by Ron in 11/3 meeting.

Revision 10860  Directory Listing
Modified Wed Nov 4 13:21:11 2009 UTC (7 years, 10 months ago) by wjp@bwh.harvard.edu
ENH: i think we have to change slicer_variables.tcl to use the branch tag? trying...

Revision 10846  Directory Listing
Modified Mon Nov 2 19:16:17 2009 UTC (7 years, 10 months ago) by wjp@bwh.harvard.edu
BUG: handling the case in which PET volume is non-DICOM

Revision 10842  Directory Listing
Modified Mon Nov 2 14:57:47 2009 UTC (7 years, 10 months ago) by wjp@bwh.harvard.edu
ENH: cleaned up error messages and added help text

Revision 10841  Directory Listing
Modified Mon Nov 2 14:57:07 2009 UTC (7 years, 10 months ago) by wjp@bwh.harvard.edu
BUG: null pointer checking if pet volume is non-DICOM

Revision 10837  Directory Listing
Modified Sun Nov 1 22:43:47 2009 UTC (7 years, 10 months ago) by wjp@bwh.harvard.edu
ENH: made GUI, MRML, Logic changes to address usability feedback from Ron and Jeff

Revision 10836  Directory Listing
Modified Sun Nov 1 22:42:06 2009 UTC (7 years, 10 months ago) by wjp@bwh.harvard.edu
ENH: added PETProceduralColorNode for MIP

Revision 10739  Directory Listing
Modified Fri Oct 23 20:04:06 2009 UTC (7 years, 10 months ago) by wjp@bwh.harvard.edu
Copied from: trunk revision 10738
ENH: branch for safe development of workshop modules

Revision 10738  Directory Listing
Modified Fri Oct 23 19:58:51 2009 UTC (7 years, 10 months ago) by pieper
Original Path: trunk
BUG: try to explicily set the language for svn output data

Revision 10737  Directory Listing
Modified Fri Oct 23 17:02:08 2009 UTC (7 years, 10 months ago) by finetjul
Original Path: trunk
BUG: Binding the toplevel window results in catching all its event AND its children events. Filter the top level events only.

Revision 10736  Directory Listing
Modified Fri Oct 23 12:55:41 2009 UTC (7 years, 10 months ago) by partyd
Original Path: trunk
ENH: copy the python dll to the slicer build directory as it may as the GenerateLM executables need it during runtime. Note to self to see if this can be avoided by setting a path to the original location instead.

Revision 10735  Directory Listing
Modified Thu Oct 22 21:43:08 2009 UTC (7 years, 10 months ago) by pieper
Original Path: trunk
COMP: fix warning

Revision 10734  Directory Listing
Modified Thu Oct 22 20:19:32 2009 UTC (7 years, 10 months ago) by pieper
Original Path: trunk
COMP: suppress microsoft build warnings

Revision 10733  Directory Listing
Modified Thu Oct 22 19:20:57 2009 UTC (7 years, 10 months ago) by vrnova
Original Path: trunk
BUGFIX: connected broken clipping pipeline on GPU ray cast II

Revision 10732  Directory Listing
Modified Thu Oct 22 18:12:44 2009 UTC (7 years, 10 months ago) by fedorov
Original Path: trunk
BUG: Voxel origin in Slicer is at the center of the pixel. The implementation
made silent assumption that the origin is at the voxel corner. When resampling
factor is not equal to 1, the code would results in a resampled volume that is 
off by 0.5*userResampleConst in each dimension in the physical space.

Revision 10731  Directory Listing
Modified Thu Oct 22 17:31:56 2009 UTC (7 years, 10 months ago) by finetjul
Original Path: trunk
BUG: restore qCTKCollapsibleGroupBox size constraints.

Revision 10730  Directory Listing
Modified Thu Oct 22 16:57:20 2009 UTC (7 years, 10 months ago) by jcfr
Original Path: trunk
ENH: QtSlicer - Add vtkSlicerEmptyModuleGUI module that will be place holder for module implemented only in QT and not in Kw. Some refactoring of the Qt module snapping has been done, the QT module is positionned and resized according to the KWwindows main notebook KwWidget

Revision 10729  Directory Listing
Modified Thu Oct 22 15:37:49 2009 UTC (7 years, 10 months ago) by pieper
Original Path: trunk
COMP: remove patch that is no longer needed with python 2.6

Revision 10728  Directory Listing
Modified Wed Oct 21 18:41:36 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: updated ROI tab UI

Revision 10727  Directory Listing
Modified Wed Oct 21 15:35:06 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
BUGFIX: borken transformation pipeline fixed

Revision 10726  Directory Listing
Modified Wed Oct 21 12:58:28 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: explicitly delete helper instances so they are properly cleaned up when slicer exits (where the scene does not close until much of the GUI is torn down)

Revision 10725  Directory Listing
Modified Wed Oct 21 12:43:50 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: extra method for debugging use

Revision 10724  Directory Listing
Modified Wed Oct 21 04:13:53 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
BUG 658: Rename GUI2 directory to GUIQT

Revision 10723  Directory Listing
Modified Wed Oct 21 03:31:42 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
ENH: qSlicerModuleTransform - Matrix widget is now displayed using a collapsible widget. The top margin of the layout used in the collapsible widget is also set to 6

Revision 10722  Directory Listing
Modified Wed Oct 21 03:30:33 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
ENH: qCTKCollapsibleGroupBox - Rename method expanded to isExpanded to be compliant with QT way of naming methods

Revision 10721  Directory Listing
Modified Wed Oct 21 03:28:21 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
BUG 657: qCTKMatrixWidget - Overload resizeEvent and call the custom method adjustRowsColumnsSize in charge of resizing uniformely the columns/rows according to the number of columns/rows and the widhet/height associated with the resize event.

Revision 10720  Directory Listing
Modified Wed Oct 21 01:21:47 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
ENH: qSlicerModuleTransform - Clean constructor - widget properties are now set within the designer

Revision 10719  Directory Listing
Modified Wed Oct 21 01:06:20 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
BUG: qMRMLLinearTransformSliderPlugin - Change widget default height from 200 to 32

Revision 10718  Directory Listing
Modified Wed Oct 21 01:04:21 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
ENH: qCTKCollapsibleGroupBox - Added Q_PROPERTY Expanded allowing to define a collapsible group box default state from the designer itself

Revision 10717  Directory Listing
Modified Wed Oct 21 01:02:09 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
ENH: qMRMLTransformSliders - Commit UI file related to enhancement associated with r10716

Revision 10716  Directory Listing
Modified Wed Oct 21 01:00:37 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
ENH: qMRMLTransformSliders - A grid layout is now used to align properly the slider/spinbox widget with a label

Revision 10715  Directory Listing
Modified Wed Oct 21 00:58:52 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
ENH: qCTKSliderSpinBoxLabel - Add the property LabelTextVisible

Revision 10714  Directory Listing
Modified Wed Oct 21 00:56:06 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
BUG 673: qCTKSlider - function fromDoubleToInteger has been updated to properly convert a double value to a integer value using the single step

Revision 10713  Directory Listing
Modified Tue Oct 20 22:15:22 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
STYLE: SlicerQt: remove useless couts

Revision 10712  Directory Listing
Modified Tue Oct 20 22:13:09 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt: when the kw application is moved, move the qt widgets too. Handle mapping and unmapping as well.

Revision 10711  Directory Listing
Modified Tue Oct 20 22:11:24 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: Add Slicer3_USE_KWWidgets variable

Revision 10710  Directory Listing
Modified Tue Oct 20 22:10:18 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: WIP with qSlicerMeasurementsModule.

Revision 10709  Directory Listing
Modified Tue Oct 20 22:06:45 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt: when the kw application is moved, move the qt widgets too. Handle mapping and unmapping as well.

Revision 10708  Directory Listing
Modified Tue Oct 20 22:03:32 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt: Fix some issues in qCTKCollapsibleGroupBox.

Revision 10707  Directory Listing
Modified Tue Oct 20 22:02:27 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: Add qCTKPositionWidget

Revision 10706  Directory Listing
Modified Tue Oct 20 20:37:50 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: avoid crash when pipeline not yet initialized

Revision 10705  Directory Listing
Modified Tue Oct 20 19:29:11 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: adding fg volume rendering

Revision 10704  Directory Listing
Modified Tue Oct 20 17:33:51 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
BUGFIX: threshold processing time order incorrect

Revision 10703  Directory Listing
Modified Tue Oct 20 16:36:32 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
BUGFIX: GPU ray casting parameters not working

Revision 10702  Directory Listing
Modified Tue Oct 20 16:27:25 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: add missing scene observers to application gui

Revision 10701  Directory Listing
Modified Tue Oct 20 15:07:50 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
BUGFIX: fg scalar opacity not calculated correctly

Revision 10700  Directory Listing
Modified Tue Oct 20 14:39:59 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
BUG: Fix QCTKWidgets/qCTKAbstractObjectFactory copy constructor to be compliant with linux and windows compiler.

Revision 10699  Directory Listing
Modified Tue Oct 20 13:57:33 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: abort rendering before switching different mappers (cpu, gpu, opengl texture) for safeguard purpose.

Revision 10698  Directory Listing
Modified Tue Oct 20 13:38:53 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: roll back material parameters as slicer 3.4

Revision 10697  Directory Listing
Modified Tue Oct 20 13:29:14 2009 UTC (7 years, 11 months ago) by partyd
Original Path: trunk
ENH: initial commit of CMake script that can build Slicer and all of its components using the ExternalProject command. This command is a new feature of CMake 2.8. This initial version of this script can only build on Windows. VS9 is required because the python solution that is downloaded is a VS9 solution.

Revision 10696  Directory Listing
Modified Tue Oct 20 13:05:36 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: adding fg volume rendering

Revision 10695  Directory Listing
Modified Tue Oct 20 11:45:51 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
COMP: fix compile warning

Revision 10694  Directory Listing
Modified Mon Oct 19 21:05:23 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: fix leak

Revision 10693  Directory Listing
Modified Mon Oct 19 19:30:21 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: adding fg volume rendering

Revision 10692  Directory Listing
Modified Mon Oct 19 18:00:49 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: remove hard-coded references to tcl 8.4 (the major version is still pegged to 8, but the minor version can vary)

Revision 10691  Directory Listing
Modified Mon Oct 19 17:59:01 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: include tcl 8.5 options in external progress search list and escape progress string in case it has spaces in it

Revision 10690  Directory Listing
Modified Mon Oct 19 17:51:58 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: fix slicer wrapper for python scripted module and ENH: add exit method to slicer object

Revision 10689  Directory Listing
Modified Mon Oct 19 16:58:58 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
ENH: use the latest ITK 3.16

Revision 10688  Directory Listing
Modified Mon Oct 19 16:09:05 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
COMP: remove slicerio from link list

Revision 10687  Directory Listing
Modified Mon Oct 19 16:08:28 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: handle more datatypes in lookup table

Revision 10686  Directory Listing
Modified Mon Oct 19 16:07:11 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: make sure gui is up to data during startup

Revision 10685  Directory Listing
Modified Mon Oct 19 15:56:33 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
COMP: fix compile warnings and add FIXME comments were some review might be needed

Revision 10684  Directory Listing
Modified Mon Oct 19 13:25:31 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
STYLE: warnings

Revision 10683  Directory Listing
Modified Mon Oct 19 03:21:36 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
ENH: explicitly set Debug mode unless Release is requested

Revision 10682  Directory Listing
Modified Sun Oct 18 18:06:30 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: update for correct dictionary key to indicate that an argument is actually a wrapped slicer object

Revision 10681  Directory Listing
Modified Sun Oct 18 03:21:18 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
BUG: incorrect thresholding for histogram calculation; uninitialized
resampling mode in CLI

Revision 10680  Directory Listing
Modified Fri Oct 16 22:11:47 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
ENH: shifting around the gui elements a bit

Revision 10679  Directory Listing
Modified Fri Oct 16 21:58:51 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
ENH: Adding a node and widget for angles. TODO: figure out why need to click 3 times to set down the 3 handles still

Revision 10678  Directory Listing
Modified Fri Oct 16 21:48:52 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
BUG: whole volume used to compute histogram instead of ROI; GUI/CLI results
still not consistent

Revision 10677  Directory Listing
Modified Fri Oct 16 20:01:25 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
BUG: fixed logic in bug fix

Revision 10676  Directory Listing
Modified Fri Oct 16 20:00:54 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
BUG: asserts cause Slicer to crash

Revision 10675  Directory Listing
Modified Fri Oct 16 19:29:39 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: adding fg volume rendering

Revision 10674  Directory Listing
Modified Fri Oct 16 18:55:40 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: adding fg volume rendering

Revision 10673  Directory Listing
Modified Fri Oct 16 18:48:40 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
ENH QtSlicer: Add qdesigner plugin support for QCTKWidgets. Add a CollapsibleGroupBox widget.

Revision 10672  Directory Listing
Modified Fri Oct 16 18:19:57 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: adding fg volume rendering

Revision 10671  Directory Listing
Modified Fri Oct 16 17:12:34 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
BUG-FIXED: fixed ASSERT case in qNodeSelector that happened on scene close.

Revision 10670  Directory Listing
Modified Fri Oct 16 17:11:23 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
ENH: changed ROI read-write XML to adhere to standard

Revision 10669  Directory Listing
Modified Fri Oct 16 16:41:56 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
STYLE: fixed help string

Revision 10668  Directory Listing
Modified Fri Oct 16 16:02:15 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: maintain slicer.MRML dict on every tab.  also code cleanups

Revision 10667  Directory Listing
Modified Fri Oct 16 14:40:30 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
STYLE: remove printouts

Revision 10666  Directory Listing
Modified Fri Oct 16 14:31:53 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: thresholding added

Revision 10665  Directory Listing
Modified Fri Oct 16 14:24:36 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: match mrml node names in addition to ids

Revision 10664  Directory Listing
Modified Thu Oct 15 22:14:54 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: avoid crash when loading scene

Revision 10663  Directory Listing
Modified Thu Oct 15 21:30:58 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: send stings to stdout and exit with return code

Revision 10662  Directory Listing
Modified Thu Oct 15 19:10:03 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: adding threshold function

Revision 10661  Directory Listing
Modified Thu Oct 15 16:41:28 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: progress feedback when using a new input in volume rendering module

Revision 10660  Directory Listing
Modified Thu Oct 15 16:32:10 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: progress feedback when loading a scene

Revision 10659  Directory Listing
Modified Thu Oct 15 16:20:19 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
BUGFIX: fixed crash when loading a scene after start slicer and enter volumerendering module

Revision 10658  Directory Listing
Modified Thu Oct 15 15:20:41 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
BUGFIX: correct cropping behavior on CPU ray casting and OpenGL texture mapping

Revision 10657  Directory Listing
Modified Thu Oct 15 14:59:07 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: update clipping code to match clipping plane definition in vtkMRMLROINode.

Revision 10656  Directory Listing
Modified Thu Oct 15 14:34:53 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: create default ROI node when selecting a new input.

Revision 10655  Directory Listing
Modified Thu Oct 15 13:37:30 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: add copy constructor and remove dll export

Revision 10654  Directory Listing
Modified Thu Oct 15 12:56:02 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
BUGFIX: fixed crash when selecting bg volume input after scene closed once.

Revision 10653  Directory Listing
Modified Wed Oct 14 22:15:45 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
ENH: both metrics working, need to confirm same as GUI results, need to fix
memory leaks

Revision 10652  Directory Listing
Modified Wed Oct 14 22:07:25 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: a few fixes and improvements - this version seems to work well and has been tested on mac

Revision 10651  Directory Listing
Modified Wed Oct 14 21:28:44 2009 UTC (7 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: exposing PETCTFusion module to build

Revision 10650  Directory Listing
Modified Wed Oct 14 21:27:35 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: workaround for slow launch time for executables - pre-generate script wrappers that had hard coded xml

Revision 10649  Directory Listing
Modified Wed Oct 14 21:26:54 2009 UTC (7 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding new module for viewing PET and CT images and computing Standardized Uptake Value (SUV)

Revision 10648  Directory Listing
Modified Wed Oct 14 21:17:03 2009 UTC (7 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding procedural color node for PETCT Fusion

Revision 10647  Directory Listing
Modified Wed Oct 14 21:12:46 2009 UTC (7 years, 11 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding procedural color nodes for PET CT fusion

Revision 10646  Directory Listing
Modified Wed Oct 14 20:28:32 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
BUG: incorrect orientation matrix during image saving

Revision 10645  Directory Listing
Modified Wed Oct 14 19:52:17 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
BUG: DefineSuperSampleSize must be independent of the MRML node

Revision 10644  Directory Listing
Modified Wed Oct 14 18:43:00 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
BUGFIX: cropping disabled by default
BUGFIX: when choosing a preset, transfer funtions will not left hung or right hung

Revision 10643  Directory Listing
Modified Wed Oct 14 18:20:11 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
ENH: filling in new functionality, no backwards compatibility

Revision 10642  Directory Listing
Modified Wed Oct 14 17:33:00 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
COMP: QtSlicer: Fix compilation errors with Visual Studio

Revision 10641  Directory Listing
Modified Wed Oct 14 17:29:22 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
ENH: QtSlicer add more widget in the plugin for QDeveloper

Revision 10640  Directory Listing
Modified Wed Oct 14 17:10:04 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
ENH: initial commit for the command line module to reflect the updated
workflow; this one is just a copy of the original CL module

Revision 10639  Directory Listing
Modified Wed Oct 14 17:04:17 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
BUG: incorrect commit

Revision 10638  Directory Listing
Modified Wed Oct 14 17:00:45 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
ENH: command line module to reflect the updated workflow

Revision 10636  Directory Listing
Modified Tue Oct 13 22:36:35 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: set initial condition to avoid null pointer

Revision 10635  Directory Listing
Modified Tue Oct 13 22:36:11 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: stripped down slice pipeline test and data

Revision 10634  Directory Listing
Modified Tue Oct 13 21:37:10 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
COMP: QtSlicer: fix wrong include file

Revision 10633  Directory Listing
Modified Tue Oct 13 21:13:23 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
COMP: QtSlicer: fix linking errors in Windows.

Revision 10632  Directory Listing
Modified Tue Oct 13 21:12:10 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
STYLE: cleaning up the frames a little

Revision 10631  Directory Listing
Modified Tue Oct 13 21:01:45 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
ENH: QtSlicer: Add plugins for QDesigner.

Revision 10630  Directory Listing
Modified Tue Oct 13 19:49:23 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
BUG: remove the temp write dir after moving files from it, since call UpdateFileList with move being 1 so it's not deleting it

Revision 10629  Directory Listing
Modified Tue Oct 13 18:09:23 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
ENH: adding code for when can change the distance annotation text colour on the VTK level, change colour button not packed

Revision 10628  Directory Listing
Modified Sat Oct 10 19:50:50 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
ENH: QtSlicer - Add method registerCodeModules to ModuleFactory. remove method set/get title from qSlicerAbstractModule, user setWindowTitle instead

Revision 10627  Directory Listing
Modified Sat Oct 10 15:21:14 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
ENH: QtSlicer - Add module factory and module manager classes allowing to instanciate and manage modules either from qSlicerApplication or vtkSlicerApplication. Add qSlicerKwUIWrapper widget that will encapsulates the KwWidget-Qt UI integration

Revision 10626  Directory Listing
Modified Fri Oct 9 22:06:15 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
BUG: fixed how was watching for and processing events, took out unused vars and methods

Revision 10625  Directory Listing
Modified Fri Oct 9 19:32:12 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new GUI and architecture

Revision 10624  Directory Listing
Modified Fri Oct 9 18:11:18 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
ENH: reverted erroneously committed file 

Revision 10623  Directory Listing
Modified Fri Oct 9 18:09:11 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
BUG-FIXED: 646 added svn version to MRML scene files. Check version on load against current slicer version and give a warning

Revision 10622  Directory Listing
Modified Fri Oct 9 17:51:13 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
BUG: SlicerQt - Fix more library dependent problems

Revision 10621  Directory Listing
Modified Fri Oct 9 16:34:29 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: turn off volume rendering 1 as it has been merged into volume rendering module

Revision 10620  Directory Listing
Modified Fri Oct 9 16:33:00 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new GUI and architecture

Revision 10619  Directory Listing
Modified Fri Oct 9 16:31:23 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new GUI and architecture

Revision 10618  Directory Listing
Modified Fri Oct 9 16:18:56 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
BUG: Fix library dependency issue leading to link error on windows and mac built

Revision 10617  Directory Listing
Modified Fri Oct 9 16:16:51 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new GUI and architecture

Revision 10616  Directory Listing
Modified Fri Oct 9 14:33:41 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
BUG-FIXED: fixed fiber tracts loosing color when seeding from no tracts region and then going back to tracts present 

Revision 10615  Directory Listing
Modified Fri Oct 9 13:16:20 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
BUG: Libs/QMRMLWidgets/CMakeLists was missing a target library. The library export macro in Libs/QCTKWidgets/qCTKAbstractObjectFactory.h was incorrect

Revision 10614  Directory Listing
Modified Thu Oct 8 22:44:26 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
BUG: Fix QMRMLWidgets library wind32 header.

Revision 10613  Directory Listing
Modified Thu Oct 8 22:39:26 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
BUG: slicer3_get_persistent_property(Slicer3_Base_LIBRARIES tmp)

Revision 10612  Directory Listing
Modified Thu Oct 8 22:14:01 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
ENH: The directory BASE/GUI/Qt is now excluded from the build process. For now, the code is left there for reference purposes. Note: Doing so removed most of the detected memory leaks.

Revision 10611  Directory Listing
Modified Thu Oct 8 22:12:14 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
ENH: allow constraining ruler end points to slice planes

Revision 10610  Directory Listing
Modified Thu Oct 8 22:11:52 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
STYLE: update the help text

Revision 10609  Directory Listing
Modified Thu Oct 8 20:50:37 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
BUG: Fix QCTKWidgets library wind32 header.

Revision 10608  Directory Listing
Modified Thu Oct 8 20:31:08 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
COMP: warning fixes

Revision 10607  Directory Listing
Modified Thu Oct 8 20:30:56 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
COMP: check in version of mrml file as written by the test so that svn does not detect a modified file

Revision 10606  Directory Listing
Modified Thu Oct 8 20:12:02 2009 UTC (7 years, 11 months ago) by finetjul
Original Path: trunk
ENH: QtSlicer: fix crash when running Slicer with Qt, QApplication needs to be initialized with an argc that is valid its whole lifetime. Make sure the module is opened at the right time and at the correct position (above the kwwidget module). Remove the module window title and window bar.

Revision 10605  Directory Listing
Modified Thu Oct 8 19:32:45 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new GUI and architecture

Revision 10604  Directory Listing
Modified Thu Oct 8 19:14:52 2009 UTC (7 years, 11 months ago) by hliu
Original Path: trunk
BUG: fixed a bug in getting image coordinates from Coronal slice view.

Revision 10603  Directory Listing
Modified Thu Oct 8 19:08:53 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new GUI and architecture

Revision 10602  Directory Listing
Modified Thu Oct 8 18:50:15 2009 UTC (7 years, 11 months ago) by hliu
Original Path: trunk
ENH: continued development.

Revision 10601  Directory Listing
Modified Thu Oct 8 18:35:47 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new GUI and architecture

Revision 10600  Directory Listing
Modified Thu Oct 8 18:30:49 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
ENH: allow child classes for constraining ruler ends, so can put them on fibre bundles

Revision 10599  Directory Listing
Modified Thu Oct 8 17:47:03 2009 UTC (7 years, 11 months ago) by tokuda
Original Path: trunk
ENH: InvokeEvent() calls have been moved from connector threads to the main thread. (By Andras)

Revision 10597  Directory Listing
Modified Thu Oct 8 14:37:17 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new GUI and architecture

Revision 10596  Directory Listing
Modified Wed Oct 7 21:28:00 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: update test to match new API

Revision 10595  Directory Listing
Modified Wed Oct 7 21:11:21 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: fix the baseline test result volume to match the corrected output of the filter

Revision 10594  Directory Listing
Modified Wed Oct 7 20:08:36 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
ENH: all rulers visible/invisible. Fixed responding to transform modified and modified events if not the active node

Revision 10593  Directory Listing
Modified Wed Oct 7 19:57:58 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: delete all the seeds during the destructor to avoid leaks

Revision 10592  Directory Listing
Modified Wed Oct 7 19:28:34 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new GUI and architecture

Revision 10591  Directory Listing
Modified Wed Oct 7 18:08:07 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: new rendering code from Yanling

Revision 10590  Directory Listing
Modified Wed Oct 7 16:15:24 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new architecture

Revision 10589  Directory Listing
Modified Wed Oct 7 16:00:37 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new architecture

Revision 10588  Directory Listing
Modified Wed Oct 7 16:00:30 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new architecture

Revision 10587  Directory Listing
Modified Wed Oct 7 16:00:23 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new architecture

Revision 10586  Directory Listing
Modified Wed Oct 7 15:58:24 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new architecture

Revision 10585  Directory Listing
Modified Wed Oct 7 15:58:17 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new architecture

Revision 10584  Directory Listing
Modified Wed Oct 7 15:57:14 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new architecture

Revision 10583  Directory Listing
Modified Wed Oct 7 15:56:36 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new architecture

Revision 10582  Directory Listing
Modified Wed Oct 7 12:17:53 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
STYLE: remove debugging print options

Revision 10581  Directory Listing
Modified Wed Oct 7 11:47:33 2009 UTC (7 years, 11 months ago) by jcfr
Original Path: trunk
ENH: Initial commit of the QtSlicer port. Added subdirs Base/GUI2, Libs/QCTKWidgets and Libs/QMRMLWidgets. Updated Application/GUI/Slicer3 and Base/GUI/vtkSlicerApplication to be able to initialize and start QtModule. CMakeLists.txt also updated to consider the script CMake/Slicer3FindQT.cmake

Revision 10580  Directory Listing
Modified Tue Oct 6 22:06:00 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
COMP: fix paths that were broken by upgrade to CMake2.6-style of library path naming (LIBRARY_OUTPUT_PATH no longer used)

Revision 10579  Directory Listing
Modified Tue Oct 6 20:51:51 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
STYLE: updated help string when updated the web page

Revision 10578  Directory Listing
Modified Tue Oct 6 14:55:44 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
BUG-FIXED: 643 added observers to MRML Tree widget

Revision 10577  Directory Listing
Modified Mon Oct 5 21:37:20 2009 UTC (7 years, 11 months ago) by tokuda
Original Path: trunk
STYLE: removing debug code

Revision 10576  Directory Listing
Modified Mon Oct 5 21:19:02 2009 UTC (7 years, 11 months ago) by tokuda
Original Path: trunk
ENH: user interface to enable/disable CRC check

Revision 10575  Directory Listing
Modified Mon Oct 5 21:08:03 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: fixes for bug 629 (SetModifiedSinceRead on nodes after editing)

Revision 10574  Directory Listing
Modified Mon Oct 5 19:48:56 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: avoid crashes due to incompletely initialized volumes (e.g. when loading a scene that points to invalid files)

Revision 10573  Directory Listing
Modified Mon Oct 5 18:39:40 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: do not try to display scalar values on cut polydata because the correct scalar fields are not calculated by vtkCutter

Revision 10572  Directory Listing
Modified Fri Oct 2 22:14:22 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
ENH: new segmentation module from Yi Gao, GATech

Revision 10571  Directory Listing
Modified Fri Oct 2 20:30:25 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module: hooked up ROI

Revision 10570  Directory Listing
Modified Fri Oct 2 20:21:56 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module: hooked up ROI

Revision 10569  Directory Listing
Modified Fri Oct 2 20:07:09 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: move file system check until after app gui has been initialized

Revision 10568  Directory Listing
Modified Fri Oct 2 19:36:24 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module: hooked up ROI

Revision 10567  Directory Listing
Modified Fri Oct 2 15:11:24 2009 UTC (7 years, 11 months ago) by lorensen
Original Path: trunk
BUG: label map filters expect integers.

Revision 10566  Directory Listing
Modified Fri Oct 2 15:09:11 2009 UTC (7 years, 11 months ago) by lorensen
Original Path: trunk
BUG: Logic for suppressing welcome screen was inverted.

Revision 10564  Directory Listing
Modified Thu Oct 1 22:27:47 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
BUG: error checking to avoid seg faults when load a scene with a model, volume, and ruler node

Revision 10563  Directory Listing
Modified Thu Oct 1 22:02:48 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: fix to support byu reading

Revision 10562  Directory Listing
Modified Thu Oct 1 20:42:30 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
ENH: make the ruler node transformable and respond to transform modified events by updating the widget in 3d.

Revision 10561  Directory Listing
Modified Thu Oct 1 20:07:23 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
COMP: took out duplicate include

Revision 10559  Directory Listing
Modified Thu Oct 1 19:53:16 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: add .byu as the file extension for BYU format model files

Revision 10558  Directory Listing
Modified Thu Oct 1 19:41:18 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: fixes for windows version of curses connecting to slicer extension webserver

Revision 10557  Directory Listing
Modified Thu Oct 1 19:37:13 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
STYLE: extra documentation of intent

Revision 10556  Directory Listing
Modified Thu Oct 1 19:20:49 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: clean up zip file handling with quotes and proper unmount

Revision 10554  Directory Listing
Modified Thu Oct 1 17:13:16 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: make the Description column able to show the entire string

Revision 10553  Directory Listing
Modified Thu Oct 1 15:53:31 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
BUG: init vars to avoid seg fault on calling constructor

Revision 10552  Directory Listing
Modified Thu Oct 1 03:02:32 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
ENH: warn once

Revision 10551  Directory Listing
Modified Wed Sep 30 21:14:33 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
BUG: merging fix from the 3-4 branch; increment on invalid iterator value
caused segfault

Revision 10549  Directory Listing
Modified Wed Sep 30 18:36:56 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
ENH: commented out subdir for java example

Revision 10548  Directory Listing
Modified Wed Sep 30 18:36:11 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
ENH: a sample Java command line plug in module, should only try to compile itself if it finds a java compiler when building, otherwise installs a jar file. TODO: figure out why it's not found on start up in Win32

Revision 10547  Directory Listing
Modified Tue Sep 29 22:54:42 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: use maps to index the observation structures in order to significantly improve access time (e.g. for CloseScene with large numbers of nodes)

Revision 10544  Directory Listing
Modified Tue Sep 29 19:56:48 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
COMP: re-enable ROI select

Revision 10543  Directory Listing
Modified Tue Sep 29 17:40:24 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
ENH: workaround asser() for non unsigned data type.

Revision 10542  Directory Listing
Modified Tue Sep 29 16:21:05 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
ENH: workaround asser() for non unsigned data type.

Revision 10541  Directory Listing
Modified Tue Sep 29 15:44:28 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module: renamed parameters node to avoid name conflict with VolumeRendering

Revision 10540  Directory Listing
Modified Tue Sep 29 15:42:55 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module: renamed parameters node to avoid name conflict with VolumeRendering

Revision 10539  Directory Listing
Modified Tue Sep 29 15:10:11 2009 UTC (7 years, 11 months ago) by hliu
Original Path: trunk
BUG: changed opencv 1.0 source code repository.

Revision 10537  Directory Listing
Modified Tue Sep 29 00:41:33 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: new architecture

Revision 10536  Directory Listing
Modified Mon Sep 28 20:51:03 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
ENH: per request from Ankako (mantis 647)

Revision 10535  Directory Listing
Modified Mon Sep 28 20:09:13 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
ENH: added --no-extension-update option to the script

Revision 10534  Directory Listing
Modified Mon Sep 28 18:49:20 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: initialize instance variables

Revision 10533  Directory Listing
Modified Mon Sep 28 17:57:17 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
COMP: add lib directory to list of directories to search for library files when building extensions against a slicer build

Revision 10532  Directory Listing
Modified Mon Sep 28 14:54:06 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: remove declaration of unimplemented method

Revision 10531  Directory Listing
Modified Sat Sep 26 18:24:20 2009 UTC (7 years, 11 months ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module: added VolumeProperty GUI

Revision 10530  Directory Listing
Modified Fri Sep 25 18:16:08 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
BUG: update the GUI with the model nodes constraining the ruler ends as defined in the ruler node.

Revision 10529  Directory Listing
Modified Fri Sep 25 16:21:18 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
BUG: check to make sure that there's a prop associated with this model (prevent crash on scene load). TODO: get the constraint updated once the scene is loaded

Revision 10528  Directory Listing
Modified Fri Sep 25 14:59:03 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
STYLE: adjusted name of the segmentated volume

Revision 10527  Directory Listing
Modified Thu Sep 24 22:13:20 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
BUG: fix the problem with non-invertible inverse field at the expense of
double evaluation of demons. The jacobian metric should now be more
consistent with the segmentation metric.

Revision 10526  Directory Listing
Modified Thu Sep 24 19:38:30 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
BUG: just remove observers, gets rid of crash on exit. Removed compiler warnings

Revision 10525  Directory Listing
Modified Wed Sep 23 18:16:16 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
ENH: show multiple ruler widgets at the same time in the 3d view. Seems to work on scene open and close.

Revision 10524  Directory Listing
Modified Wed Sep 23 18:11:14 2009 UTC (7 years, 11 months ago) by naucoin
Original Path: trunk
BUG: clean up pointers better in destructor, making sure that when call Delete the 3d view is emptied

Revision 10523  Directory Listing
Modified Wed Sep 23 16:26:47 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: better scene save/load behavior

Revision 10522  Directory Listing
Modified Wed Sep 23 16:21:19 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: moving toward new structure (stage I, cleaning up, bug fix...)
ENH: better scene save/load behavior

Revision 10521  Directory Listing
Modified Wed Sep 23 16:14:54 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: moving toward new structure (stage I, cleaning up, bug fix...)
ENH: better scene save/load behavior

Revision 10520  Directory Listing
Modified Wed Sep 23 16:13:33 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: moving toward new structure (stage I, cleaning up, bug fix...)
ENH: better scene save/load behavior

Revision 10519  Directory Listing
Modified Wed Sep 23 16:11:02 2009 UTC (7 years, 11 months ago) by vrnova
Original Path: trunk
ENH: moving toward new structure (stage I, cleaning up, bug fix...)
ENH: better scene save/load behavior

Revision 10518  Directory Listing
Modified Wed Sep 23 15:51:31 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
ENH: s3ext's for head mask extraction and bias correction CLI

Revision 10517  Directory Listing
Modified Tue Sep 22 23:42:08 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
BUG: incorrect opacity function for volume rendering; still not functioning as
expected. Workaround: select segmentation manually in step node selector, then
select "None".

Revision 10516  Directory Listing
Modified Tue Sep 22 16:57:25 2009 UTC (7 years, 11 months ago) by fedorov
Original Path: trunk
ENH: save jacobian image

Revision 10515  Directory Listing
Modified Tue Sep 22 15:45:40 2009 UTC (7 years, 11 months ago) by casey.goodlett
Original Path: trunk
ENH: Add capability to add a label image as a mask for the fixed images.  Samples used to compute the image match metric are only drawn within this mask.

Revision 10514  Directory Listing
Modified Tue Sep 22 14:09:35 2009 UTC (7 years, 11 months ago) by pieper
Original Path: trunk
BUG: revert to pre-optimized version of event broker to avoid crash-on-exit due to corrupted index hash_maps

Revision 10511  Directory Listing
Modified Mon Sep 21 22:53:39 2009 UTC (8 years ago) by fedorov
Original Path: trunk
BUG: remove constraint on maximum number of samples

Revision 10510  Directory Listing
Modified Mon Sep 21 19:38:27 2009 UTC (8 years ago) by fedorov
Original Path: trunk
BUG: set build type if --release flag is specified

Revision 10508  Directory Listing
Modified Mon Sep 21 16:58:48 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: island removal for externally defined volumes

Revision 10507  Directory Listing
Modified Mon Sep 21 16:30:20 2009 UTC (8 years ago) by fedorov
Original Path: trunk
BUG: use nn interpolator for deformable metric

Revision 10506  Directory Listing
Modified Sun Sep 20 22:43:48 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: fix type warning

Revision 10505  Directory Listing
Modified Sun Sep 20 22:42:53 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: typo that would cause use of unitialized variable

Revision 10504  Directory Listing
Modified Sun Sep 20 21:14:01 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: speed up scene shutdown and other operations by keeping hash tables in EventBroker.  Also ENH: new NodeAdded methods on vtkMRMLScene to allow external code (like Loader.tcl) to bulk-add node with only a single notify when going through helper routines like AddFiberBundle

Revision 10502  Directory Listing
Modified Fri Sep 18 18:47:30 2009 UTC (8 years ago) by alexy
Original Path: trunk
ENH: added AddExcludedChildClass to node selector and excluded vtkMRMLDiffusionTensorDisplayPropertiesNode from all color map selectors

Revision 10500  Directory Listing
Modified Fri Sep 18 17:01:00 2009 UTC (8 years ago) by alexy
Original Path: trunk
ENH: improved performance of multi fiber loading by compressing NodeAddedEvent

Revision 10499  Directory Listing
Modified Fri Sep 18 16:51:54 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: be sure microsoft tools (esp. link.exe) are ahead of cygwin commands in path

Revision 10498  Directory Listing
Modified Fri Sep 18 16:16:17 2009 UTC (8 years ago) by naucoin
Original Path: trunk
STYLE: update the tooltips on the cache entries

Revision 10497  Directory Listing
Modified Fri Sep 18 16:00:48 2009 UTC (8 years ago) by naucoin
Original Path: trunk
STYLE: print out a slightly more user friendly error message when file reading fails

Revision 10496  Directory Listing
Modified Fri Sep 18 15:03:53 2009 UTC (8 years ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module

Revision 10495  Directory Listing
Modified Fri Sep 18 13:07:36 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: switch to external progress bar to avoid extra renders when loading data

Revision 10494  Directory Listing
Modified Thu Sep 17 21:34:39 2009 UTC (8 years ago) by fedorov
Original Path: trunk
BUG: make sure indent is never 0 or negative

Revision 10493  Directory Listing
Modified Thu Sep 17 20:53:41 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: move all the vtk widget classes into a separate class so that can encapsulate the variables needed to display more than one ruler in the scene at once

Revision 10492  Directory Listing
Modified Thu Sep 17 20:51:07 2009 UTC (8 years ago) by naucoin
Original Path: trunk
COMP: take out include of point placer, it's in the ruler widget now

Revision 10491  Directory Listing
Modified Thu Sep 17 20:50:08 2009 UTC (8 years ago) by naucoin
Original Path: trunk
BUG: fixing typo, print out correct model id

Revision 10490  Directory Listing
Modified Thu Sep 17 20:40:01 2009 UTC (8 years ago) by naucoin
Original Path: trunk
BUG: fixing memory leak

Revision 10489  Directory Listing
Modified Thu Sep 17 19:58:25 2009 UTC (8 years ago) by naucoin
Original Path: trunk
BUG: remove memory leak

Revision 10488  Directory Listing
Modified Thu Sep 17 19:43:34 2009 UTC (8 years ago) by naucoin
Original Path: trunk
BUG: removing memory leaks

Revision 10487  Directory Listing
Modified Thu Sep 17 19:39:50 2009 UTC (8 years ago) by casey.goodlett
Original Path: trunk
COMP: Be sure that copy information from image works in both old and new versions of ITK.

Revision 10486  Directory Listing
Modified Thu Sep 17 18:10:15 2009 UTC (8 years ago) by vrnova
Original Path: trunk
BUGFIX: fixed logic hole bypassing transfer function loading

Revision 10485  Directory Listing
Modified Thu Sep 17 03:05:52 2009 UTC (8 years ago) by sylvain
Original Path: trunk
ENH: expose all the parameters of the MRI Bias Field Correction filter. As pointed out by Andriy Fedorov, some parameters that were previously hidden need to be adjusted in order to get the best correction. These parameters will be displayed in a separate tab for advanced settings.

Revision 10484  Directory Listing
Modified Wed Sep 16 21:59:52 2009 UTC (8 years ago) by tokuda
Original Path: trunk
BUG: Removing debug outputs.

Revision 10483  Directory Listing
Modified Wed Sep 16 21:16:09 2009 UTC (8 years ago) by fedorov
Original Path: trunk
BUG: missing space

Revision 10481  Directory Listing
Modified Wed Sep 16 12:39:50 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: refactor to avoid cirular dependency between vtkSlicerApplication and QtSlicerWebKit

Revision 10480  Directory Listing
Modified Wed Sep 16 11:49:25 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH hooks to access slicer application via javascript using Qt webkit plugin

Revision 10479  Directory Listing
Modified Tue Sep 15 22:23:15 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: allow loading .mat transforms (ITK TransformIO used extension)

Revision 10478  Directory Listing
Modified Tue Sep 15 18:05:41 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: use correct ifdef for determining if Qt is available

Revision 10477  Directory Listing
Modified Mon Sep 14 21:36:29 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: fix the qvtk plugin test

Revision 10476  Directory Listing
Modified Mon Sep 14 21:26:23 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: fix ifdef and logic for including method in non-Qt builds

Revision 10475  Directory Listing
Modified Mon Sep 14 21:04:55 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: qt based web display with embeded vtk render (experimental)

Revision 10474  Directory Listing
Modified Mon Sep 14 20:18:14 2009 UTC (8 years ago) by vrnova
Original Path: trunk
BUGFIX: removed duplicated selection node

Revision 10473  Directory Listing
Modified Mon Sep 14 12:26:48 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: STYLE: reorganize Qt code into unique subdirectory.  ENH: use WebKit browser for help items when using Qt

Revision 10471  Directory Listing
Modified Mon Sep 14 11:57:02 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: fix issue reported by Yi Gao where installed Teem directory includes version patch but slicer's install config reports just the major and minor numbers

Revision 10470  Directory Listing
Modified Sat Sep 12 20:35:41 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: make pythonqt distinct from python and qt with it's own ifdef

Revision 10469  Directory Listing
Modified Sat Sep 12 17:51:37 2009 UTC (8 years ago) by aylward
Original Path: trunk
COMP: Unused params


Revision 10468  Directory Listing
Modified Sat Sep 12 17:35:11 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: re-add file with corrected capitalization

Revision 10467  Directory Listing
Modified Sat Sep 12 17:33:55 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: remove file with wrong capitalization

Revision 10466  Directory Listing
Modified Sat Sep 12 16:56:35 2009 UTC (8 years ago) by aylward
Original Path: trunk
BUG: Need to link modules with ITK


Revision 10465  Directory Listing
Modified Fri Sep 11 21:06:22 2009 UTC (8 years ago) by hliu
Original Path: trunk
ENH: added BuildGUIForTrackerFrame().

Revision 10464  Directory Listing
Modified Fri Sep 11 20:07:20 2009 UTC (8 years ago) by casey.goodlett
Original Path: trunk
ENH: Tweak a few parameters

Revision 10463  Directory Listing
Modified Fri Sep 11 19:30:15 2009 UTC (8 years ago) by hliu
Original Path: trunk
ENH: more development.

Revision 10462  Directory Listing
Modified Fri Sep 11 18:53:54 2009 UTC (8 years ago) by casey.goodlett
Original Path: trunk
COMP: Forgot a few lines in the CMakeLists.txt for the previous checkin

Revision 10461  Directory Listing
Modified Fri Sep 11 18:50:39 2009 UTC (8 years ago) by casey.goodlett
Original Path: trunk
ENH: Add two new prototype modules to fall in a hierarchy of registration modules that will solve specific use cases.  As a first step included are RegisterFollowupBrainMR and RegisterBrainMRToTemplate.  These modules present a simplified view of the options in Register Images for those use cases.

Revision 10460  Directory Listing
Modified Fri Sep 11 17:03:25 2009 UTC (8 years ago) by alexy
Original Path: trunk
ENH: Qt GAD module

Revision 10459  Directory Listing
Modified Fri Sep 11 16:53:35 2009 UTC (8 years ago) by alexy
Original Path: trunk
ENH: Qt GAD module

Revision 10458  Directory Listing
Modified Fri Sep 11 15:48:07 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: don't force the render in the callback - let the update call take care of it

Revision 10457  Directory Listing
Modified Fri Sep 11 14:17:54 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: crosshair mode initialized

Revision 10456  Directory Listing
Modified Thu Sep 10 20:36:32 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: don't try to call dlerror on windows and include proper header on mac

Revision 10455  Directory Listing
Modified Thu Sep 10 19:19:03 2009 UTC (8 years ago) by fedorov
Original Path: trunk
STYLE: Connect() returns non-0 even if there's no error! Check error
code instead of return value.

Revision 10454  Directory Listing
Modified Thu Sep 10 19:04:31 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: changes to GUI to improve usability (Ron's suggestion)

Revision 10453  Directory Listing
Modified Thu Sep 10 18:55:59 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: clean up logic for detecting 64 bit builds on linux and solaris

Revision 10452  Directory Listing
Modified Thu Sep 10 18:31:18 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: remove extra widget instantiation

Revision 10451  Directory Listing
Modified Thu Sep 10 18:30:44 2009 UTC (8 years ago) by pieper
Original Path: trunk
STYLE: clean up code

Revision 10450  Directory Listing
Modified Thu Sep 10 18:29:13 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: avoid querying variables that haven't been set yet

Revision 10449  Directory Listing
Modified Thu Sep 10 18:28:10 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: fix leak

Revision 10448  Directory Listing
Modified Thu Sep 10 18:27:37 2009 UTC (8 years ago) by pieper
Original Path: trunk
STYLE: remove dead code

Revision 10447  Directory Listing
Modified Thu Sep 10 18:26:12 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: set master window for dialog

Revision 10446  Directory Listing
Modified Thu Sep 10 18:25:14 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: add normals so rendering is correct

Revision 10445  Directory Listing
Modified Thu Sep 10 18:18:35 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: extra status information for module detection

Revision 10444  Directory Listing
Modified Thu Sep 10 18:11:49 2009 UTC (8 years ago) by fedorov
Original Path: trunk
STYLE: get rid of warnings

Revision 10443  Directory Listing
Modified Thu Sep 10 18:11:33 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: apply patches from Attila Nagy for Solaris builds

Revision 10442  Directory Listing
Modified Thu Sep 10 18:03:20 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: added clipping box label to improve intuitiveness (Ron's request)

Revision 10441  Directory Listing
Modified Thu Sep 10 16:37:19 2009 UTC (8 years ago) by fedorov
Original Path: trunk
BUG: interpolation was unintentionally removed by the previous commit 
STYLE: misleading comment removed

Revision 10440  Directory Listing
Modified Thu Sep 10 14:15:31 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: move namespace directive to C++ code to avoid windows compile error

Revision 10439  Directory Listing
Modified Wed Sep 9 23:05:27 2009 UTC (8 years ago) by fedorov
Original Path: trunk
BUG: incorrect pixel typing could lead to changes in the image
intensity for some modules used with some data types (eg, char vs uchar) --
propagating the change from 3-4 branch

Revision 10437  Directory Listing
Modified Wed Sep 9 21:35:19 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: patch for python 2.6

Revision 10436  Directory Listing
Modified Wed Sep 9 21:14:15 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: fixes to build for python 2.6 and numpy 1.3.x

Revision 10435  Directory Listing
Modified Wed Sep 9 21:13:08 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: switch to python 2.6 dll

Revision 10434  Directory Listing
Modified Wed Sep 9 19:42:51 2009 UTC (8 years ago) by naucoin
Original Path: trunk
BUG: wrong conversion from radians to degrees

Revision 10433  Directory Listing
Modified Wed Sep 9 19:09:08 2009 UTC (8 years ago) by casey.goodlett
Original Path: trunk
BUG: Make the default parameters in the constructor the same as
specified in the XML file for the Slicer GUI.  This will make the
default paramters for the command line version the same as when run
from the GUI.

STYLE: Convert pointer initalizatino from 0 to NULL.

Revision 10432  Directory Listing
Modified Wed Sep 9 18:59:35 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: handle signed and unsigned integers correctly

Revision 10431  Directory Listing
Modified Wed Sep 9 18:03:54 2009 UTC (8 years ago) by fedorov
Original Path: trunk
BUG: change to STATIC breaks Slicer build (on Linux, at least)

Revision 10430  Directory Listing
Modified Wed Sep 9 17:50:11 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: cleanup of ROI selection to avoid inconsistencies due to
conflicting updates, and to improve performance

Revision 10429  Directory Listing
Modified Tue Sep 8 23:34:16 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: handle differences in build path settings

Revision 10428  Directory Listing
Modified Tue Sep 8 23:26:19 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: sample single volume mrml file

Revision 10427  Directory Listing
Modified Tue Sep 8 23:25:42 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: better valgrind cut and paste

Revision 10426  Directory Listing
Modified Tue Sep 8 20:52:14 2009 UTC (8 years ago) by hjohnson
Original Path: trunk
COMP: With the conversion to CMake version 2.6, the variables CMAKE_RUNTIME_OUTPUT_DIRECTORY CMAKE_LIBRARY_OUTPUT_DIRECTORY CMAKE_ARCHIVE_OUTPUT_DIRECTORY should be used instead of EXECUTABLE_OUTPUT_PATH and LIBRARY_OUTPUT_PATH.

Revision 10425  Directory Listing
Modified Tue Sep 8 20:49:39 2009 UTC (8 years ago) by hjohnson
Original Path: trunk
ENH:  Updated to include new version of python, and BatchMake for building on new version gcc compilers on Mac Snow Leopard.

Revision 10424  Directory Listing
Modified Tue Sep 8 20:48:11 2009 UTC (8 years ago) by hjohnson
Original Path: trunk
ENH:  Updated to include new version of python, and BatchMake for building on new version gcc compilers on Mac Snow Leopard.

Revision 10423  Directory Listing
Modified Tue Sep 8 20:47:38 2009 UTC (8 years ago) by hjohnson
Original Path: trunk
ENH:  Updated to include new version of python, and BatchMake for building on new version gcc compilers on Mac Snow Leopard.

Revision 10422  Directory Listing
Modified Tue Sep 8 20:46:08 2009 UTC (8 years ago) by hjohnson
Original Path: trunk
ENH:  Updated to include new version of python, and BatchMake for building on new version gcc compilers on Mac Snow Leopard.

Revision 10421  Directory Listing
Modified Tue Sep 8 15:00:32 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: add missing call to SetShiftNegativeEigenvalues

Revision 10420  Directory Listing
Modified Tue Sep 8 01:22:39 2009 UTC (8 years ago) by aylward
Original Path: trunk
BUG: Commandline args to generateTestData changed


Revision 10419  Directory Listing
Modified Mon Sep 7 15:27:29 2009 UTC (8 years ago) by hjohnson
Original Path: trunk
COMP:  Fixed compilation by using a stable tag of BRAINSFit rather than the nightly trunk.

Revision 10418  Directory Listing
Modified Mon Sep 7 13:40:19 2009 UTC (8 years ago) by aylward
Original Path: trunk
COMP: Message about long tests should be an "Attention" statement and not a "Warning" statement to avoid ctest flagging as a build configuration warning on dashboards


Revision 10417  Directory Listing
Modified Fri Sep 4 22:17:08 2009 UTC (8 years ago) by naucoin
Original Path: trunk
BUG: include the windows header

Revision 10416  Directory Listing
Modified Fri Sep 4 22:09:15 2009 UTC (8 years ago) by naucoin
Original Path: trunk
BUG: fix export for windows

Revision 10415  Directory Listing
Modified Fri Sep 4 21:58:20 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: first pass at making a ruler node, save to scene and undo work. Next step: make more than one 3d widget. Split out the ruler into it's own widget as well.

Revision 10414  Directory Listing
Modified Fri Sep 4 19:31:35 2009 UTC (8 years ago) by naucoin
Original Path: trunk
BUG: found frame leak, removed double include of header

Revision 10413  Directory Listing
Modified Fri Sep 4 17:54:22 2009 UTC (8 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: i think this fixes the bug curt reported that causes data gui panel to build twice...

Revision 10412  Directory Listing
Modified Fri Sep 4 14:57:55 2009 UTC (8 years ago) by aylward
Original Path: trunk
ENH: Updated to support testing when used by external projects.   Also added argument to ResampleImage function to specify DefaultPixelValue used by resampler.


Revision 10411  Directory Listing
Modified Thu Sep 3 15:09:13 2009 UTC (8 years ago) by fedorov
Original Path: trunk
STYLE: remove debugging output

Revision 10410  Directory Listing
Modified Thu Sep 3 14:29:48 2009 UTC (8 years ago) by fedorov
Original Path: trunk
BUG: bg/fg volumes were reset by PropagateVolumeSelection. renderVolume was
deleted, but not set to "", causing runtime error.

Revision 10409  Directory Listing
Modified Wed Sep 2 04:28:18 2009 UTC (8 years ago) by tokuda
Original Path: trunk
ENH: add mask selector for parameter map.

Revision 10408  Directory Listing
Modified Wed Sep 2 01:13:33 2009 UTC (8 years ago) by alexy
Original Path: trunk
ENH: Qt GAD module

Revision 10407  Directory Listing
Modified Tue Sep 1 21:19:09 2009 UTC (8 years ago) by alexy
Original Path: trunk
ENH: Qt GAD module

Revision 10406  Directory Listing
Modified Tue Sep 1 18:46:20 2009 UTC (8 years ago) by hliu
Original Path: trunk
STYLE: cleaned up code.

Revision 10405  Directory Listing
Modified Mon Aug 31 21:59:05 2009 UTC (8 years ago) by tokuda
Original Path: trunk
ENH: integrating curve save buttons. (The button to save fitted curve has been removed.)

Revision 10404  Directory Listing
Modified Mon Aug 31 20:12:50 2009 UTC (8 years ago) by tokuda
Original Path: trunk
BUG: fixing segmentation fault on selecting target curve.

Revision 10403  Directory Listing
Modified Mon Aug 31 19:27:25 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: make sure things like the data tree get notified when the name of the newly read node is changed

Revision 10402  Directory Listing
Modified Mon Aug 31 19:26:44 2009 UTC (8 years ago) by pieper
Original Path: trunk
STYLE: this error was being triggered even when trying to read in a linear transfrorm - I don't think that's called for...

Revision 10401  Directory Listing
Modified Mon Aug 31 18:58:22 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: add transform reading to the Add Data dialog

Revision 10400  Directory Listing
Modified Mon Aug 31 18:39:38 2009 UTC (8 years ago) by vrnova
Original Path: trunk
ENH: GPU ray cast shading model updated

Revision 10399  Directory Listing
Modified Mon Aug 31 16:57:57 2009 UTC (8 years ago) by hliu
Original Path: trunk
BUG: used VTK_PatientToImageRegistration_EXPORT instead of VTK_PATIENTTOIMAGEREGISTRATION_EXPORT.

Revision 10398  Directory Listing
Modified Mon Aug 31 16:52:13 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: new procs to record a screen capture every render

Revision 10397  Directory Listing
Modified Mon Aug 31 16:41:43 2009 UTC (8 years ago) by hliu
Original Path: trunk
ENH: added module PatientToImageRegistration.

Revision 10396  Directory Listing
Modified Mon Aug 31 12:05:04 2009 UTC (8 years ago) by tokuda
Original Path: trunk
BUG: fixing problem that target curve menu doesn't update.

Revision 10395  Directory Listing
Modified Sun Aug 30 02:30:57 2009 UTC (8 years ago) by tokuda
Original Path: trunk
ENH: SelectAllPlots() and DeselectAllPlots() have been implemented.

Revision 10394  Directory Listing
Modified Sat Aug 29 02:09:27 2009 UTC (8 years ago) by tokuda
Original Path: trunk
STYLE: clean-up vtkFourDAnalysisGUI.cxx/h 

Revision 10393  Directory Listing
Modified Fri Aug 28 23:40:26 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: improving performance of ROI selection step

Revision 10392  Directory Listing
Modified Fri Aug 28 22:50:02 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: improve performance -- PropagateVolumeSelection is a very expensive way
to set up composite nodes!

Revision 10390  Directory Listing
Modified Fri Aug 28 21:47:10 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: fix logic error in calculating slice offsets - should avoid some event loops

Revision 10389  Directory Listing
Modified Fri Aug 28 21:46:11 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: avoid crash when widget is used with no viewer (as in the editor module)

Revision 10388  Directory Listing
Modified Fri Aug 28 21:45:16 2009 UTC (8 years ago) by pieper
Original Path: trunk
STYLE: clean up dead code

Revision 10387  Directory Listing
Modified Fri Aug 28 20:56:32 2009 UTC (8 years ago) by tokuda
Original Path: trunk
ENH: add popup menu in the initial parameter list to select plot nodes.

Revision 10386  Directory Listing
Modified Fri Aug 28 20:00:21 2009 UTC (8 years ago) by demian
Original Path: trunk
BUG: Fixed a compatibility issue with ipython 0.10, that had some weird references

Revision 10385  Directory Listing
Modified Fri Aug 28 19:37:27 2009 UTC (8 years ago) by vrnova
Original Path: trunk
ENH: Illustrative context preserving exploration

Revision 10384  Directory Listing
Modified Fri Aug 28 14:39:49 2009 UTC (8 years ago) by fedorov
Original Path: trunk
BUG: incorrect reference image for scan2 resampling

Revision 10383  Directory Listing
Modified Thu Aug 27 22:52:02 2009 UTC (8 years ago) by tokuda
Original Path: trunk
ENH: adding a button to import array (curve) data.

Revision 10382  Directory Listing
Modified Thu Aug 27 22:40:12 2009 UTC (8 years ago) by tokuda
Original Path: trunk
ENH: fixing memory leak

Revision 10381  Directory Listing
Modified Thu Aug 27 22:33:07 2009 UTC (8 years ago) by fedorov
Original Path: trunk
BUG: somehow, resampling results end up under transform

Revision 10380  Directory Listing
Modified Thu Aug 27 22:05:26 2009 UTC (8 years ago) by tokuda
Original Path: trunk
ENH: adding a button to import array (curve) data.

Revision 10379  Directory Listing
Modified Thu Aug 27 21:45:54 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: expose teem option to shift negative eigenvalues per request from Mahnaz and Jim.  Off by default per discussion with Casey

Revision 10378  Directory Listing
Modified Thu Aug 27 21:41:02 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: improved leak testingg script

Revision 10377  Directory Listing
Modified Thu Aug 27 20:53:44 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: non axis-aligned check will now cause warning, not error.

Revision 10376  Directory Listing
Modified Thu Aug 27 20:02:10 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: close the scalar bar annotation by default as it comes up in the editor colour chooser

Revision 10375  Directory Listing
Modified Thu Aug 27 19:57:06 2009 UTC (8 years ago) by naucoin
Original Path: trunk
BUG: need to pack with fill x at least so that when close it, it doesn't shrink down to nothing

Revision 10374  Directory Listing
Modified Thu Aug 27 18:19:25 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: include an IsClosed flag on the scene so other code can tell if it is correct to respond to events and add nodes

Revision 10373  Directory Listing
Modified Thu Aug 27 18:16:53 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: avoid name clash with Windows GetYValue macro

Revision 10372  Directory Listing
Modified Thu Aug 27 18:12:53 2009 UTC (8 years ago) by pieper
Original Path: trunk
ENH: make the context helper dialog be modal so it doesn't get lost behind the main application

Revision 10371  Directory Listing
Modified Thu Aug 27 18:11:27 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: handle changes to the text entries

Revision 10370  Directory Listing
Modified Thu Aug 27 13:53:22 2009 UTC (8 years ago) by tokuda
Original Path: trunk
ENH: fixing python codes in vtkCurveAnalysisPythonInterface.cxx to get default constant values

Revision 10369  Directory Listing
Modified Thu Aug 27 04:56:45 2009 UTC (8 years ago) by sylvain
Original Path: trunk
BUG: disable three tests temporarily. will be fixed when I am back from Belgium.

Revision 10368  Directory Listing
Modified Wed Aug 26 21:15:01 2009 UTC (8 years ago) by sylvain
Original Path: trunk
BUG: fix warnings with unused variables. STYLE: remove dead code. comply with VTK standards

Revision 10367  Directory Listing
Modified Wed Aug 26 20:52:54 2009 UTC (8 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing bug in reading Timepoints out of volume bundles

Revision 10366  Directory Listing
Modified Wed Aug 26 20:34:17 2009 UTC (8 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed some null pointer stuff, fixed mrml node saving/reading and timestamp serialization

Revision 10365  Directory Listing
Modified Wed Aug 26 19:48:03 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: get the window level presets from the display node and let the user select them

Revision 10364  Directory Listing
Modified Wed Aug 26 18:34:45 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: save the window level presets from a dicom volume if they're there

Revision 10363  Directory Listing
Modified Wed Aug 26 18:34:03 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: show the window level presets from the display node

Revision 10362  Directory Listing
Modified Wed Aug 26 18:05:36 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: set the node's description

Revision 10361  Directory Listing
Modified Wed Aug 26 17:58:48 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: save window and level presets on a display node

Revision 10360  Directory Listing
Modified Wed Aug 26 17:48:28 2009 UTC (8 years ago) by naucoin
Original Path: trunk
BUG: print out ErrorCode, URL and RootDirectory when call PrintSelf

Revision 10359  Directory Listing
Modified Wed Aug 26 17:46:38 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: better category of dGEMRIC nodes

Revision 10358  Directory Listing
Modified Wed Aug 26 17:42:55 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: removed the test from the trunk

Revision 10357  Directory Listing
Modified Wed Aug 26 17:03:02 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: implement edit properties on color node in mrml tree

Revision 10356  Directory Listing
Modified Wed Aug 26 16:11:44 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: when generate new node, set the range. ENH: implement the copy colour node for editing

Revision 10355  Directory Listing
Modified Wed Aug 26 15:53:51 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: add cmake variable for USE_SYSTEM_PYTHON and use it to control PYTHONPATH setup at launch time - many thanks to Luke Bloy for identifying the issue and testing the fix

Revision 10354  Directory Listing
Modified Wed Aug 26 15:19:48 2009 UTC (8 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: created method that uses DICOM Temporal Position information header info, if available, to load bundles -- otherwise, sorts by slice location.

Revision 10353  Directory Listing
Modified Wed Aug 26 13:17:08 2009 UTC (8 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing win32 compile errors

Revision 10352  Directory Listing
Modified Wed Aug 26 02:39:25 2009 UTC (8 years ago) by alexy
Original Path: trunk
ENH: Qt support

Revision 10351  Directory Listing
Modified Tue Aug 25 22:03:35 2009 UTC (8 years ago) by naucoin
Original Path: trunk
BUG: warning to debug message

Revision 10350  Directory Listing
Modified Tue Aug 25 21:31:27 2009 UTC (8 years ago) by barre
Original Path: trunk
ENH: close bug 0000503, add visibility icon to displayable models in tree.

Revision 10349  Directory Listing
Modified Tue Aug 25 20:00:34 2009 UTC (8 years ago) by vrnova
Original Path: trunk
ENH: gradient magnitude opacity modulation in GPU ray cast

Revision 10348  Directory Listing
Modified Tue Aug 25 19:45:23 2009 UTC (8 years ago) by alexy
Original Path: trunk
ENH: Qt support

Revision 10347  Directory Listing
Modified Tue Aug 25 17:54:15 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: change File category to Labels from File

Revision 10346  Directory Listing
Modified Tue Aug 25 17:46:56 2009 UTC (8 years ago) by naucoin
Original Path: trunk
ENH: add a pop up button to describe the nodes

Revision 10345  Directory Listing
Modified Tue Aug 25 14:55:27 2009 UTC (8 years ago) by vrnova
Original Path: trunk
ENH: update ray ending calculation algorithm

Revision 10344  Directory Listing
Modified Mon Aug 24 22:43:49 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: added error if the input image is not axis-aligned, will not proceed
with resampling for such images

Revision 10343  Directory Listing
Modified Mon Aug 24 21:58:53 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: added functionality to reduce ROI with mouse clicks inside the region

Revision 10342  Directory Listing
Modified Mon Aug 24 18:46:26 2009 UTC (8 years ago) by tokuda
Original Path: trunk
BUG: fixing problem: updating plot list after deleting plot nodes

Revision 10341  Directory Listing
Modified Mon Aug 24 18:38:15 2009 UTC (8 years ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding new method; commented out until Junichi can test on his data

Revision 10340  Directory Listing
Modified Mon Aug 24 18:33:56 2009 UTC (8 years ago) by pieper
Original Path: trunk
STYLE: fix indent

Revision 10339  Directory Listing
Modified Mon Aug 24 18:07:13 2009 UTC (8 years ago) by pieper
Original Path: trunk
COMP: fix warning about unused variable

Revision 10338  Directory Listing
Modified Mon Aug 24 13:40:42 2009 UTC (8 years ago) by fedorov
Original Path: trunk
ENH: removed puts

Revision 10337  Directory Listing
Modified Mon Aug 24 12:17:58 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: add missing ack

Revision 10336  Directory Listing
Modified Mon Aug 24 12:16:31 2009 UTC (8 years ago) by pieper
Original Path: trunk
BUG: add missing link to documentation

Revision 10335  Directory Listing
Modified Sun Aug 23 17:46:11 2009 UTC (8 years ago) by millerjv
Original Path: trunk
ENH: crosshairs without navigation

Revision 10334  Directory Listing
Modified Sat Aug 22 14:48:56 2009 UTC (8 years ago) by millerjv
Original Path: trunk
ENH: better centering of non-navigation crosshair on LeaveEvent

Revision 10333  Directory Listing
Modified Sat Aug 22 01:50:15 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
ENH: Crosshairs without navigation controls

Revision 10332  Directory Listing
Modified Sat Aug 22 01:28:21 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
BUG: fixed errors caused by plot nodes.

Revision 10331  Directory Listing
Modified Fri Aug 21 22:53:45 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: set reasonable table ranges, used to display scalar bar widget

Revision 10330  Directory Listing
Modified Fri Aug 21 22:52:01 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: display the procedural nodes a bit better, sample at integer values over the range. ENH: add range entries (not editable if it's a procedural node), not quite working to update the scalar bar actor, still debugging at the vtk level.

Revision 10329  Directory Listing
Modified Fri Aug 21 22:49:24 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
ENH: allow tcl access to the color display widget

Revision 10328  Directory Listing
Modified Fri Aug 21 22:47:59 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: fix the generation of names from colours when the colours can go over a range below zero

Revision 10327  Directory Listing
Modified Fri Aug 21 21:12:09 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: tests were failing because of the vtkTeem library included in Slicer3_Libs_LIBRARIES

Revision 10326  Directory Listing
Modified Fri Aug 21 16:33:37 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: access methods for Python

Revision 10324  Directory Listing
Modified Fri Aug 21 15:00:53 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: adding setter/getter of time stamps for Python.

Revision 10323  Directory Listing
Modified Fri Aug 21 00:49:03 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: New plotting class + plotting MRML nodes

Revision 10322  Directory Listing
Modified Thu Aug 20 21:38:31 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: fix memory leak

Revision 10321  Directory Listing
Modified Thu Aug 20 21:21:03 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: fix memory leak

Revision 10320  Directory Listing
Modified Thu Aug 20 21:20:21 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: remove unused code

Revision 10319  Directory Listing
Modified Thu Aug 20 20:53:39 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
ENH: make the leak test more complete by renaming shared libraries (so they are never even loaded, not just ignored)

Revision 10318  Directory Listing
Modified Thu Aug 20 19:55:42 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: changed default write file extension from .nhdr to .nrrd at Ron's request

Revision 10316  Directory Listing
Modified Thu Aug 20 15:02:03 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
COMP: move QT include command in front of first use

Revision 10314  Directory Listing
Modified Wed Aug 19 21:26:35 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
ENH: fixed Qt signals

Revision 10313  Directory Listing
Modified Wed Aug 19 19:54:10 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: adding GPU ray cast II

Revision 10312  Directory Listing
Modified Wed Aug 19 19:27:06 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
STYLE: removing debugging codes

Revision 10311  Directory Listing
Modified Wed Aug 19 18:49:14 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
ENH: added Qt link libs

Revision 10310  Directory Listing
Modified Wed Aug 19 18:34:25 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
COMP: correcting typo in set call

Revision 10309  Directory Listing
Modified Wed Aug 19 17:49:26 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: return the table range, set the Heat high threshold

Revision 10308  Directory Listing
Modified Wed Aug 19 16:31:07 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: added error handling for remote scene downloading

Revision 10307  Directory Listing
Modified Wed Aug 19 16:14:34 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: added the functionality to load tutorial data with one button click!
(Steve gets credit for this great idea!)

Revision 10306  Directory Listing
Modified Wed Aug 19 15:13:56 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: added warning/info message about limitations of the implementation

Revision 10305  Directory Listing
Modified Wed Aug 19 13:59:05 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added icons requested by sebastien for tree widget

Revision 10304  Directory Listing
Modified Wed Aug 19 13:55:38 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added new image data for tree widget icons

Revision 10303  Directory Listing
Modified Tue Aug 18 22:41:40 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
ENH: add a scalar bar annotation and widget to the colour display.

Revision 10302  Directory Listing
Modified Tue Aug 18 22:40:07 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: return the range, todo: figure out why this doesn't display properly in vtkScalarBarActor

Revision 10301  Directory Listing
Modified Tue Aug 18 21:43:49 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: remove accidental #define

Revision 10300  Directory Listing
Modified Tue Aug 18 21:41:06 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
ENH: Qt support

Revision 10299  Directory Listing
Modified Tue Aug 18 20:31:47 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: separate transfer funcs for 2nd volume

Revision 10298  Directory Listing
Modified Tue Aug 18 18:00:05 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: make multicolumn list expand with dialog box

Revision 10297  Directory Listing
Modified Tue Aug 18 17:59:57 2009 UTC (8 years, 1 month ago) by casey.goodlett
Original Path: trunk
ENH: switch transform save and load to use the appropriate slicer routines.

Revision 10296  Directory Listing
Modified Tue Aug 18 17:36:32 2009 UTC (8 years, 1 month ago) by casey.goodlett
Original Path: trunk
ENH: switch landmark initalization to use fiducials list instead of float-vector.

Revision 10295  Directory Listing
Modified Tue Aug 18 16:43:28 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk
BUG: turned off OpenCV by default.

Revision 10294  Directory Listing
Modified Tue Aug 18 16:04:47 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk
ENH: added OpenCV option.

Revision 10293  Directory Listing
Modified Tue Aug 18 16:02:56 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk
ENH: added USE_OPENCV option.

Revision 10292  Directory Listing
Modified Tue Aug 18 16:00:58 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk
ENH: made OpenCV compile with opencv library 1.0.

Revision 10291  Directory Listing
Modified Tue Aug 18 16:00:16 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk
ENH: made OpenCV compile with opencv library 1.0.

Revision 10290  Directory Listing
Modified Tue Aug 18 15:59:12 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk
ENH: made OpenCV compile with opencv library 1.0.

Revision 10289  Directory Listing
Modified Tue Aug 18 15:57:35 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk
ENH: moved OpenCV module into IGT category.

Revision 10288  Directory Listing
Modified Tue Aug 18 15:46:38 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
COMP: need vtkIdType for args to GetIncrements

Revision 10287  Directory Listing
Modified Tue Aug 18 13:44:09 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
ENH: add replace value option for pixels outside of mask area

Revision 10286  Directory Listing
Modified Tue Aug 18 13:17:05 2009 UTC (8 years, 1 month ago) by casey.goodlett
Original Path: trunk
ENH: Merge latest version of RegisterImagesModule.  This includes better support for landmark initalization.

Revision 10285  Directory Listing
Modified Tue Aug 18 09:36:18 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: use of unsigned short pointer instead of float pointer

Revision 10284  Directory Listing
Modified Tue Aug 18 09:33:42 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: preview computation did not execute correctly because of wrong extent

Revision 10283  Directory Listing
Modified Tue Aug 18 01:30:01 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: run button did not trigger the segmentation

Revision 10282  Directory Listing
Modified Tue Aug 18 01:29:21 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: image indices were outside of image extent

Revision 10281  Directory Listing
Modified Tue Aug 18 00:36:39 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: improve the visualization of the gaussian distribution. treat the case of the distributions of the same image in X and Y

Revision 10280  Directory Listing
Modified Tue Aug 18 00:18:28 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: improve the help and about section with usage instructions and a link to the documentation

Revision 10279  Directory Listing
Modified Mon Aug 17 23:39:52 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: set default parameter values to optimum values found during experiments on MRI data

Revision 10278  Directory Listing
Modified Mon Aug 17 22:40:12 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: revert to commit of the MRI Bias Field Correction and fix the crash when clicking on Apply. set default parameter values to optimum. Remove unnecessary sliders from user interface as these parameters do not need to be modified anymore.

Revision 10277  Directory Listing
Modified Mon Aug 17 19:59:39 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: revert to revision 9752. first version committed at the end of the NA-MIC Week. fix error that was reported with the HEAD version

Revision 10276  Directory Listing
Modified Mon Aug 17 16:27:22 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: build and run new segmentation parameters failed. note that new test has been renamed

Revision 10275  Directory Listing
Modified Mon Aug 17 15:43:01 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: remove renamed test. test name had a typo

Revision 10274  Directory Listing
Modified Mon Aug 17 15:41:55 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: rename test new segmentation parameters. typo in test name

Revision 10273  Directory Listing
Modified Mon Aug 17 15:35:35 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: preprocessing manager test was failing

Revision 10272  Directory Listing
Modified Mon Aug 17 14:31:06 2009 UTC (8 years, 1 month ago) by maddah
Original Path: trunk
BUG: models as fiber bundles do not need to have tensor data associating with them to be loaded in Slicer. 

Revision 10271  Directory Listing
Modified Mon Aug 17 13:30:35 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
BUG: adding a line to check a pointer in the node list

Revision 10270  Directory Listing
Modified Mon Aug 17 02:32:48 2009 UTC (8 years, 1 month ago) by haehn
Original Path: trunk
ENH: Updated VMTK extension files

Revision 10269  Directory Listing
Modified Mon Aug 17 02:31:15 2009 UTC (8 years, 1 month ago) by haehn
Original Path: trunk
ENH: Updated VMTK extension files

Revision 10268  Directory Listing
Modified Sun Aug 16 17:46:59 2009 UTC (8 years, 1 month ago) by domibel
Original Path: trunk
ENH: Adding missing #include directive (needed for gcc-4.4)

Revision 10267  Directory Listing
Modified Sun Aug 16 16:14:50 2009 UTC (8 years, 1 month ago) by domibel
Original Path: trunk
ENH: Version numbering for shared libraries

Revision 10266  Directory Listing
Modified Sat Aug 15 22:45:05 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: coding vtkSlicerXYPlotWidget class 

Revision 10264  Directory Listing
Modified Fri Aug 14 21:07:00 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: allow subsequent scripted module packages to load if one of them fails

Revision 10262  Directory Listing
Modified Fri Aug 14 21:03:35 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: adding new MRML nodes and plotting widget

Revision 10261  Directory Listing
Modified Fri Aug 14 20:42:02 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: last major missing piece in logic for handling externally defined segmentation; hide volume rendering when leaving the module

Revision 10258  Directory Listing
Modified Fri Aug 14 19:23:27 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: computation of scalar range per image. swapping position of objects in show user interface

Revision 10257  Directory Listing
Modified Fri Aug 14 18:26:12 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: check for supported data types before calling GetAdjustedScalarRange as it can crash out on an assert

Revision 10256  Directory Listing
Modified Fri Aug 14 18:04:19 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
COMP: fix include dependency order

Revision 10255  Directory Listing
Modified Fri Aug 14 17:48:18 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
STYLE: fix comment

Revision 10254  Directory Listing
Modified Fri Aug 14 17:31:57 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: mean was offset by one

Revision 10253  Directory Listing
Modified Fri Aug 14 17:06:14 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: avoid memory leak

Revision 10252  Directory Listing
Modified Fri Aug 14 16:59:48 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: avoid crash on exit

Revision 10251  Directory Listing
Modified Fri Aug 14 16:55:45 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: change image resolution

Revision 10250  Directory Listing
Modified Fri Aug 14 16:53:26 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: remove code used for debug

Revision 10249  Directory Listing
Modified Fri Aug 14 16:25:22 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: normalize the intensity distributions

Revision 10248  Directory Listing
Modified Fri Aug 14 16:07:52 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: hopefully, most of the logic to handle externally defined segmentations

Revision 10247  Directory Listing
Modified Fri Aug 14 15:55:22 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
ENH: use the node attribute Category, if it's defined, to create sub menus. Add radio buttons and set the item commands in one call, use GetNumberOfItems to determine if need to put in a column break instead of keeping a count (but need to decrement number of items by 1 to get the index of items)

Revision 10246  Directory Listing
Modified Fri Aug 14 15:28:04 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: adding GPU ray cast II (new GUI)

Revision 10245  Directory Listing
Modified Fri Aug 14 14:38:35 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: adding GPU ray cast II (new GUI)

Revision 10244  Directory Listing
Modified Fri Aug 14 06:28:22 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: normalize scalar range of gaussian distributions

Revision 10243  Directory Listing
Modified Fri Aug 14 06:18:42 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: enable label map sampling. deprecate sampling and manual sampling

Revision 10242  Directory Listing
Modified Fri Aug 14 04:35:08 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
BUG: fixing bug that nodes are not removed from IO tree. Also some unused methos have been removed from the connector class.

Revision 10241  Directory Listing
Modified Thu Aug 13 20:20:21 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
BUG: MINIP shader program and pointer init problem

Revision 10240  Directory Listing
Modified Thu Aug 13 16:43:29 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: typo in environment variable name

Revision 10239  Directory Listing
Modified Thu Aug 13 14:28:46 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
COMP: 5.2 to 5.4 deprecated methods

Revision 10238  Directory Listing
Modified Thu Aug 13 14:20:01 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: remove tkcon printing of vtk messages (not properly escaped and can cause crashes) and clean up some extension code

Revision 10237  Directory Listing
Modified Thu Aug 13 02:31:22 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
STYLE: deleting unnecessary methods and variables.

Revision 10236  Directory Listing
Modified Thu Aug 13 01:30:38 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: reimplementing IGTL onnector as MRML node

Revision 10235  Directory Listing
Modified Wed Aug 12 23:23:22 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: add in error checking for when fail to read models and overlays

Revision 10234  Directory Listing
Modified Wed Aug 12 23:07:25 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: was missing check for 0 vertices, which can happen if the file is empty

Revision 10233  Directory Listing
Modified Wed Aug 12 21:45:14 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
ENH: adding reverse alpha blend as per feature request in bug tracker #539

Revision 10232  Directory Listing
Modified Wed Aug 12 21:20:46 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: gui+mrml to handle externally defined segmentation

Revision 10231  Directory Listing
Modified Wed Aug 12 20:48:22 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
COMP: cleaning up header files

Revision 10230  Directory Listing
Modified Wed Aug 12 20:42:49 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
STYLE: give the table name in the error message

Revision 10229  Directory Listing
Modified Wed Aug 12 20:07:25 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: call the test with the parameter from the xml file

Revision 10228  Directory Listing
Modified Wed Aug 12 19:50:51 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: new baseline image due to changes in PolyDataToLabelmap.cxx

Revision 10227  Directory Listing
Modified Wed Aug 12 18:30:21 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
ENH: jump up to VTK 5.4

Revision 10226  Directory Listing
Modified Wed Aug 12 18:12:21 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
ENH: add a new param to the MultiplyTest

Revision 10225  Directory Listing
Modified Wed Aug 12 17:44:51 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: finishing GPU ray cast II

Revision 10224  Directory Listing
Modified Wed Aug 12 17:43:38 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
ENH: added a few more tags. Not sure if they are needed

Revision 10223  Directory Listing
Modified Wed Aug 12 16:34:19 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: longer sliders and higher resolution for more precise control

Revision 10222  Directory Listing
Modified Wed Aug 12 16:08:30 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: GPU ray casting II (multivolume rendering) works now

Revision 10221  Directory Listing
Modified Wed Aug 12 14:36:33 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding some error checking

Revision 10219  Directory Listing
Modified Tue Aug 11 21:08:38 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: replace label menu with node selector.

Revision 10218  Directory Listing
Modified Tue Aug 11 20:51:35 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
BUG: wrong choice for the default ResampleChoice value

Revision 10217  Directory Listing
Modified Tue Aug 11 20:38:00 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
BUG: changes in the procedure for determining the voxel size for supersampled
volume were not propagated to the command line module

Revision 10216  Directory Listing
Modified Tue Aug 11 19:32:03 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: adding GPU volume rendering II

Revision 10215  Directory Listing
Modified Tue Aug 11 18:50:34 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: resampling direction was not updated

Revision 10214  Directory Listing
Modified Tue Aug 11 18:47:33 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: fix variable name in debug information

Revision 10213  Directory Listing
Modified Tue Aug 11 18:45:26 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: result of slider goes from 0 to 1. The cast to int resulted in 0. ENH: set slider resolution to 1.0/64.0

Revision 10212  Directory Listing
Modified Tue Aug 11 16:36:57 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: event broker was landing us in UpdateFiducialListFromMRML when there were no points, add a check to avoid a warning message

Revision 10211  Directory Listing
Modified Tue Aug 11 14:02:01 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: fiducial view changes per Ron's request, fixed RemoveViewProp error

Revision 10210  Directory Listing
Modified Tue Aug 11 13:46:45 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: compilation error with SunCC because pointer to char must be const pointer to char. Reviewing the code revealed that the function containing this code is not called in EMSegment. Unused functions have thus be commented out.

Revision 10209  Directory Listing
Modified Tue Aug 11 12:20:37 2009 UTC (8 years, 1 month ago) by lantiga
Original Path: trunk
ENH: the ICP surface registration module now optionally accepts initial transform and outputs the computed transform

Revision 10208  Directory Listing
Modified Mon Aug 10 21:51:58 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: fixed leaks in modules

Revision 10207  Directory Listing
Modified Mon Aug 10 18:36:21 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: fix leaks in prostate nav module

Revision 10206  Directory Listing
Modified Mon Aug 10 17:43:21 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: be sure to run select module command after GUI is built, but before any scripts or other actions specified on the command line are run - otherwise the GUI may be destroyed before the module is loaded

Revision 10205  Directory Listing
Modified Mon Aug 10 16:07:29 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
BUG: ChangeTracker is dependent on Volumes module, but the compiler fails 
to find the header in some cases. Placing Volumes before ChangeTracker in
CMakeLists seems to fix this problem.

Revision 10204  Directory Listing
Modified Mon Aug 10 15:09:28 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
COMP: use floor for windows

Revision 10203  Directory Listing
Modified Mon Aug 10 14:27:38 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: avoid using curly braces in variable indirection for .tcl.in files since it appears that CMake considers this to be a reserved syntax

Revision 10202  Directory Listing
Modified Mon Aug 10 11:34:29 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: add --test-mode to launcher as valid argument in addition to --test_mode

Revision 10201  Directory Listing
Modified Sun Aug 9 21:58:45 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: set error codes for situation where we bypass the launcher to use tclsh directly

Revision 10200  Directory Listing
Modified Sun Aug 9 20:26:01 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: added 0-order interpolation for operations on labels

Revision 10199  Directory Listing
Modified Fri Aug 7 22:37:24 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
ENH: use the node Attributes to categorise the color nodes, first step to providing them in an ordered fashion in the drop down menu

Revision 10198  Directory Listing
Modified Fri Aug 7 22:24:26 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
ENH: if made a new model display node when reading in a model, check to see if there are scalars on the point data, and if so, make them visible and use the RedGreen color node to display them. This avoids a CLI user having to always set the scalars visible when a model with scalar overlay is returned to Slicer's GUI

Revision 10197  Directory Listing
Modified Fri Aug 7 21:25:46 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
BUG: removing debug output

Revision 10196  Directory Listing
Modified Fri Aug 7 21:24:43 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
STYLE: changing script names

Revision 10195  Directory Listing
Modified Fri Aug 7 21:16:03 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: adding member variable to hold method name in Python curve fitting class

Revision 10194  Directory Listing
Modified Fri Aug 7 20:40:52 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: null pointer checking

Revision 10193  Directory Listing
Modified Fri Aug 7 20:38:12 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: doing some null pointer checking in DataGUI's enter method and updating status text while big giant gui is slowly building

Revision 10192  Directory Listing
Modified Fri Aug 7 20:35:37 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing the scrolling to bottom of data transfer panel during remote IO transfers so users know what's going on

Revision 10191  Directory Listing
Modified Fri Aug 7 20:32:58 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: merging changes from release branch into trunk: linking state of GUI to node for compositing options and initializing the GUI in slice controllers

Revision 10190  Directory Listing
Modified Fri Aug 7 20:30:50 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Merging changes from Release branch into trunk to catch failed writes indicating file system is full, and giving options to clear Temp and Cache dirs

Revision 10188  Directory Listing
Modified Fri Aug 7 20:14:00 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
STYLE: changing indent

Revision 10187  Directory Listing
Modified Fri Aug 7 20:11:27 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: more error checking to avoid crashing on a non ideal input model

Revision 10186  Directory Listing
Modified Fri Aug 7 18:48:16 2009 UTC (8 years, 1 month ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: changing return value of write callback to be 0 instead of -1 to match return type unsigned in

Revision 10184  Directory Listing
Modified Fri Aug 7 18:35:53 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
ENH: add a right hand mesh flag (PK to verify it's used properly), add arrays rather than just over writing scalars, check for already existing arrays to avoid some re-computation (more to do)

Revision 10183  Directory Listing
Modified Fri Aug 7 17:27:26 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: ignore errors from the blt build on mac (it actually succeeds as far as we are concerned

Revision 10182  Directory Listing
Modified Fri Aug 7 15:40:22 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: fix warning. conversion from double to int

Revision 10181  Directory Listing
Modified Fri Aug 7 13:55:38 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
COMP: fix warning about non-virtual destructor

Revision 10180  Directory Listing
Modified Fri Aug 7 13:11:58 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: add colons or semicolons to path specs for module paths

Revision 10179  Directory Listing
Modified Thu Aug 6 16:39:15 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
COMP: fix compile warnings

Revision 10178  Directory Listing
Modified Thu Aug 6 16:37:44 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
BUG: removing fmin(), since it may not be compatible with win

Revision 10177  Directory Listing
Modified Thu Aug 6 15:46:15 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
BUG: files left out of the previous commit by mistake

Revision 10176  Directory Listing
Modified Thu Aug 6 15:01:04 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: gui+logic+mrml to handle ROI resampling options
BUG: removed assert to fix win compile problem

Revision 10175  Directory Listing
Modified Wed Aug 5 22:36:27 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: functionality to disable ROI registration

Revision 10174  Directory Listing
Modified Wed Aug 5 22:12:35 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: functionality to handle externally specified global transform and disabled
global registration

Revision 10173  Directory Listing
Modified Wed Aug 5 21:02:53 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: turn off exit confimation prompt when querying for module paths

Revision 10172  Directory Listing
Modified Wed Aug 5 14:44:21 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: conservative internal volume size limit

Revision 10171  Directory Listing
Modified Wed Aug 5 14:03:27 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: GUI/MRML functionality to support registration choices

Revision 10170  Directory Listing
Modified Wed Aug 5 00:33:34 2009 UTC (8 years, 1 month ago) by haehn
Original Path: trunk
ENH: A module providing an easier interface for the VMTK level-set segmentation process.

Revision 10169  Directory Listing
Modified Tue Aug 4 20:57:03 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: adding the flexibility to disable/improve the automatic registration
step

Revision 10168  Directory Listing
Modified Tue Aug 4 19:05:31 2009 UTC (8 years, 1 month ago) by haehn
Original Path: trunk
ENH: added launch_ImportModulePaths to get the module path from registry and set the dependencies paths before slicer is launched

Revision 10167  Directory Listing
Modified Mon Aug 3 22:28:30 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: fix external script invocation on windows

Revision 10166  Directory Listing
Modified Mon Aug 3 17:38:03 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: remove reference to missing variable

Revision 10165  Directory Listing
Modified Mon Aug 3 16:58:29 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
ENH: allow launcher to query module paths from registry so dependencies can be set before launching the application

Revision 10164  Directory Listing
Modified Mon Aug 3 15:16:30 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: fix incorrect merge

Revision 10163  Directory Listing
Modified Mon Aug 3 13:29:15 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
COMP: solaris build fixes from Attila - thanks, Attila

Revision 10162  Directory Listing
Modified Sat Aug 1 16:11:46 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10161  Directory Listing
Modified Sat Aug 1 15:59:38 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10160  Directory Listing
Modified Sat Aug 1 15:54:53 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10159  Directory Listing
Modified Sat Aug 1 15:54:14 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10158  Directory Listing
Modified Sat Aug 1 15:49:49 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10157  Directory Listing
Modified Sat Aug 1 15:49:02 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10156  Directory Listing
Modified Sat Aug 1 15:44:47 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10155  Directory Listing
Modified Sat Aug 1 15:40:45 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10154  Directory Listing
Modified Sat Aug 1 15:29:54 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10153  Directory Listing
Modified Sat Aug 1 15:27:37 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10152  Directory Listing
Modified Sat Aug 1 15:25:50 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10151  Directory Listing
Modified Sat Aug 1 15:23:43 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10150  Directory Listing
Modified Sat Aug 1 15:21:54 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10149  Directory Listing
Modified Sat Aug 1 15:21:37 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10148  Directory Listing
Modified Sat Aug 1 15:19:57 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10147  Directory Listing
Modified Sat Aug 1 15:18:52 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10146  Directory Listing
Modified Sat Aug 1 15:16:49 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10145  Directory Listing
Modified Sat Aug 1 15:15:38 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10144  Directory Listing
Modified Sat Aug 1 15:15:09 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10143  Directory Listing
Modified Sat Aug 1 15:09:03 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10142  Directory Listing
Modified Sat Aug 1 15:08:21 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10141  Directory Listing
Modified Sat Aug 1 15:05:52 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10140  Directory Listing
Modified Sat Aug 1 15:01:36 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10139  Directory Listing
Modified Sat Aug 1 14:48:56 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10138  Directory Listing
Modified Sat Aug 1 05:57:15 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: doc

Revision 10137  Directory Listing
Modified Sat Aug 1 04:47:43 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: code cleaning

Revision 10136  Directory Listing
Modified Sat Aug 1 04:45:50 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: code cleaning

Revision 10135  Directory Listing
Modified Sat Aug 1 04:43:45 2009 UTC (8 years, 1 month ago) by jvs
Original Path: trunk
ENH: add analyze data script

Revision 10134  Directory Listing
Modified Fri Jul 31 20:34:12 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module

Revision 10132  Directory Listing
Modified Fri Jul 31 17:07:24 2009 UTC (8 years, 1 month ago) by maddah
Original Path: trunk
ENH:Extension file for EM Clustering module

Revision 10131  Directory Listing
Modified Fri Jul 31 17:03:08 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module

Revision 10129  Directory Listing
Modified Fri Jul 31 13:24:40 2009 UTC (8 years, 1 month ago) by taox
Original Path: trunk
ENH: Added HammerRegistration as a slicer extension.

Revision 10128  Directory Listing
Modified Fri Jul 31 13:04:45 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: be explicit about the types for numerical calculations

Revision 10127  Directory Listing
Modified Fri Jul 31 11:54:19 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: catch possible error for older versions of mac OSX that don't have system_profiler command

Revision 10126  Directory Listing
Modified Thu Jul 30 21:25:59 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: convert pointset to polydata. missing header files for log lookup table and warp scalar filter

Revision 10125  Directory Listing
Modified Thu Jul 30 21:15:40 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: compute the logarithm of the number of occurences. ignore zero intensities. warp scalars into the geometry

Revision 10124  Directory Listing
Modified Thu Jul 30 20:30:21 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: add a lookup table to improve the visualization of the 2D histogram

Revision 10123  Directory Listing
Modified Thu Jul 30 19:33:19 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
ENH: new Volume Rendering architecture

Revision 10122  Directory Listing
Modified Thu Jul 30 19:09:12 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
ENH: move the options to an advanced section of the xml file. Moved some error output to cerr. Name the output arrays so they can be selected and checked later on

Revision 10121  Directory Listing
Modified Thu Jul 30 18:04:19 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: use resize instead of assigning for the meshdata valarrays, as it was resulting in a size of 0 on linux64

Revision 10120  Directory Listing
Modified Thu Jul 30 17:28:44 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: more error checking. ENH: adding filter watchers

Revision 10119  Directory Listing
Modified Thu Jul 30 17:21:51 2009 UTC (8 years, 1 month ago) by taox
Original Path: trunk
ENH: compute Euler angles and output.

Revision 10118  Directory Listing
Modified Thu Jul 30 16:44:37 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: added error checking

Revision 10117  Directory Listing
Modified Thu Jul 30 15:43:03 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
ENH: new Volume Rendering architecture

Revision 10116  Directory Listing
Modified Thu Jul 30 12:04:18 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: add missing initializer in constructor

Revision 10115  Directory Listing
Modified Thu Jul 30 11:49:51 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: fix windows compile issues (missing return values)

Revision 10114  Directory Listing
Modified Thu Jul 30 02:40:08 2009 UTC (8 years, 1 month ago) by tgl
Original Path: trunk
ENH use a token in the module paths so that the current Slicer3 SVN revision number can be used to differentiate available extensions

Revision 10113  Directory Listing
Modified Thu Jul 30 02:24:54 2009 UTC (8 years, 1 month ago) by tgl
Original Path: trunk
ENH don't re-add

Revision 10111  Directory Listing
Modified Wed Jul 29 23:57:16 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: implementing targeting step

Revision 10110  Directory Listing
Modified Wed Jul 29 23:22:40 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: add a box widget for the mask creation.

Revision 10109  Directory Listing
Modified Wed Jul 29 23:18:06 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: add a box widget for the mask creation.

Revision 10108  Directory Listing
Modified Wed Jul 29 23:15:11 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: compute and render the 2D histogram of the registered images

Revision 10107  Directory Listing
Modified Wed Jul 29 23:04:43 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
ENH: handle the case when output label image is already initialized

Revision 10106  Directory Listing
Modified Wed Jul 29 23:04:24 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: fix the round() compilation error on Windows

Revision 10105  Directory Listing
Modified Wed Jul 29 22:26:24 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
COMP: removing RobotNode and RobotDisplayNode from CMakeList.txt.

Revision 10104  Directory Listing
Modified Wed Jul 29 22:12:04 2009 UTC (8 years, 1 month ago) by fedorov
Original Path: trunk
BUG: reallocate threshold filter

Revision 10103  Directory Listing
Modified Wed Jul 29 21:07:21 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: remove spaces from start of lines in version text file

Revision 10102  Directory Listing
Modified Wed Jul 29 20:46:13 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
ENH: run the versioner as a separate process rather than sourcing it to avoid possible cross contamination of variables and so output will print

Revision 10101  Directory Listing
Modified Wed Jul 29 20:45:13 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
ENH: extra debug information when creating versions

Revision 10100  Directory Listing
Modified Wed Jul 29 20:44:44 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
ENH: guess the number parallel builds to run on Darwin based on the number of CPU cores

Revision 10099  Directory Listing
Modified Wed Jul 29 20:42:34 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
ENH: better error message handling and addition of Extesions add-on directory in svn

Revision 10098  Directory Listing
Modified Wed Jul 29 20:38:47 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: work around X11 error message on mac startup

Revision 10097  Directory Listing
Modified Wed Jul 29 19:38:21 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: better handling of text strings in tcl console

Revision 10096  Directory Listing
Modified Wed Jul 29 19:20:30 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
ENH: per request from Andriy they log messages are printed to the tcl console in addition to stderr and the log window

Revision 10095  Directory Listing
Modified Wed Jul 29 15:05:28 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
ENH: documentation

Revision 10094  Directory Listing
Modified Wed Jul 29 15:05:01 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
ENH: Added interpolation control

Revision 10093  Directory Listing
Modified Wed Jul 29 14:41:40 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
ENH: using resampling to get the second image into the coordinate frame of the first. This gets us progress, abort, and the linear fastpath through the resampling

Revision 10092  Directory Listing
Modified Wed Jul 29 14:09:49 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: putting step numbers into the titles of wizard pages

Revision 10090  Directory Listing
Modified Wed Jul 29 13:06:00 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module

Revision 10089  Directory Listing
Modified Wed Jul 29 13:04:54 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module

Revision 10088  Directory Listing
Modified Wed Jul 29 02:10:38 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: add visualization feedback for run segmentation step

Revision 10087  Directory Listing
Modified Wed Jul 29 01:51:18 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: add render widget for the run segmentation node step

Revision 10086  Directory Listing
Modified Wed Jul 29 01:35:15 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: add axes for the rendering of the 2D gaussian distributions

Revision 10084  Directory Listing
Modified Wed Jul 29 00:36:33 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: fix the WriteXML bug. Missing space at the beginning of line. vtkMRMLNode does not include a space at the end of the line. It's the responsibility of WriteXML functions in every module.

Revision 10083  Directory Listing
Modified Tue Jul 28 21:57:45 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
BUG: modified Add, Subtract, Multiply to work in physical space

Revision 10082  Directory Listing
Modified Tue Jul 28 21:48:42 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: fix the Windows compilation errors. replace multi-dimensional vectors with uni-dimensional vectors

Revision 10081  Directory Listing
Modified Tue Jul 28 21:08:08 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering module

Revision 10080  Directory Listing
Modified Tue Jul 28 20:26:20 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: deleting unnecessary files.

Revision 10079  Directory Listing
Modified Tue Jul 28 20:24:52 2009 UTC (8 years, 1 month ago) by tgl
Original Path: trunk
ENH report repository error, but don't sweat it when only doing uninstall

Revision 10076  Directory Listing
Modified Tue Jul 28 20:09:32 2009 UTC (8 years, 1 month ago) by tgl
Original Path: trunk
BUG update stored repository URL in case the user changes it

Revision 10075  Directory Listing
Modified Tue Jul 28 20:08:28 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
BUG: 600. Not sure why the Mac does not catch the exception properly. Changed the code so that Add always returns an image the same size as the first image. The resulting image will be the same as the first image wherever the images do not overlap but will be the sum of the images where they do overlap.  All this is done in pixel space, ignoring origin, spacing, and orientations

Revision 10074  Directory Listing
Modified Tue Jul 28 19:48:18 2009 UTC (8 years, 1 month ago) by tgl
Original Path: trunk
ENH use helper method to construct install path, create if it does not exist

Revision 10073  Directory Listing
Modified Tue Jul 28 18:46:14 2009 UTC (8 years, 1 month ago) by tgl
Original Path: trunk
COMP typo

Revision 10071  Directory Listing
Modified Tue Jul 28 18:20:30 2009 UTC (8 years, 1 month ago) by tgl
Original Path: trunk
BUG 611 change default value of ExtensionsInstallPath to the TemporaryDir (/Users/$USER/Slicer3$USER on a Mac), however, use a SVN Revision stamped subdirectory so that different Slicer3 builds can store Extensions separately.

Revision 10070  Directory Listing
Modified Tue Jul 28 18:05:01 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
BUG: cleaned out old targets that kept current targets from building

Revision 10069  Directory Listing
Modified Tue Jul 28 18:04:12 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
BUG: cleaned out old targets that kept current targets from building

Revision 10068  Directory Listing
Modified Tue Jul 28 17:41:55 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
BUG: pointers are not printed with 0x prefix on DevStudio 2008

Revision 10066  Directory Listing
Modified Tue Jul 28 16:53:22 2009 UTC (8 years, 1 month ago) by hayes
Original Path: trunk
BUG: curly brace typo

Revision 10065  Directory Listing
Modified Tue Jul 28 16:43:08 2009 UTC (8 years, 1 month ago) by hayes
Original Path: trunk
ENH: packaging for Slicer3Version.txt

Revision 10063  Directory Listing
Modified Tue Jul 28 16:14:16 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
BUG: Jim needs the path separator to be Windows style path separator when building on Windows

Revision 10062  Directory Listing
Modified Tue Jul 28 16:07:14 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: remove code that should have been replaced by previous merge from release branch

Revision 10061  Directory Listing
Modified Tue Jul 28 15:56:56 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: handle case where class name is NULL to avoid error messages at startup

Revision 10060  Directory Listing
Modified Tue Jul 28 15:07:37 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
BUG: Tensors data array needs to have a name

Revision 10059  Directory Listing
Modified Tue Jul 28 14:54:01 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
COMP: re-enable the versioner script so builds will know what version they are

Revision 10058  Directory Listing
Modified Tue Jul 28 13:58:47 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
COMP: fixing compile errors

Revision 10057  Directory Listing
Modified Tue Jul 28 13:51:58 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: changing steps

Revision 10056  Directory Listing
Modified Tue Jul 28 13:18:36 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: Changing color scheme.

Revision 10055  Directory Listing
Modified Tue Jul 28 12:29:06 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: Step transitions are now managed by vtkMRMLProstateNavManagerNode.

Revision 10054  Directory Listing
Modified Mon Jul 27 23:51:39 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: fix the rendering of 2D gaussian distributions

Revision 10053  Directory Listing
Modified Mon Jul 27 22:45:29 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: show the histogram of the target image in step 5

Revision 10052  Directory Listing
Modified Mon Jul 27 22:44:35 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
BUG: fix the WriteXML bug, remove the space that was added at the end of every line if the xml file

Revision 10051  Directory Listing
Modified Mon Jul 27 22:24:04 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
COMP: try to detect and workaround differing cygwin path preferences that have been configured

Revision 10050  Directory Listing
Modified Mon Jul 27 19:26:54 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
BUG: fixing compile error

Revision 10049  Directory Listing
Modified Mon Jul 27 19:08:25 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: adding GPU ray cast II (lighting)

Revision 10048  Directory Listing
Modified Mon Jul 27 18:01:10 2009 UTC (8 years, 1 month ago) by maddah
Original Path: trunk
ENH: added the option to color fibers based on their cluster ID

Revision 10047  Directory Listing
Modified Mon Jul 27 18:00:14 2009 UTC (8 years, 1 month ago) by maddah
Original Path: trunk
ENH: added the option to color fibers based on their cluster ID

Revision 10046  Directory Listing
Modified Mon Jul 27 17:54:27 2009 UTC (8 years, 1 month ago) by maddah
Original Path: trunk
ENH: added the option to color fibers based on their cluster ID

Revision 10045  Directory Listing
Modified Mon Jul 27 17:53:54 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: adding nodes for robot management

Revision 10044  Directory Listing
Modified Mon Jul 27 17:47:29 2009 UTC (8 years, 1 month ago) by maddah
Original Path: trunk
ENH: added the option to color fibers based on their cluster ID

Revision 10043  Directory Listing
Modified Mon Jul 27 17:32:17 2009 UTC (8 years, 1 month ago) by maddah
Original Path: trunk
ENH: added the option to color fibers based on their cluster ID

Revision 10042  Directory Listing
Modified Mon Jul 27 17:03:15 2009 UTC (8 years, 1 month ago) by maddah
Original Path: trunk
ENH: added the option to color fibers based on their cluster ID

Revision 10041  Directory Listing
Modified Mon Jul 27 16:15:38 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: chaging step names

Revision 10040  Directory Listing
Modified Mon Jul 27 15:56:23 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: chaging step names

Revision 10039  Directory Listing
Modified Mon Jul 27 15:56:16 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: chaging step names

Revision 10037  Directory Listing
Modified Mon Jul 27 15:46:19 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
STYLE: fixed documentation link

Revision 10036  Directory Listing
Modified Mon Jul 27 15:36:40 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: removing z-frame registration code from Calibration step class.

Revision 10035  Directory Listing
Modified Mon Jul 27 14:46:50 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: adding robot registration classes.

Revision 10034  Directory Listing
Modified Mon Jul 27 13:27:59 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: deleting classes for NaviTrack support.

Revision 10033  Directory Listing
Modified Mon Jul 27 12:34:16 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
ENH: updates in the last experiment during Project Week

Revision 10032  Directory Listing
Modified Sat Jul 25 19:06:15 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk
STYLE: removed some message commands.

Revision 10031  Directory Listing
Modified Sat Jul 25 18:58:36 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk
BUG: linked to OpenCV libraries.

Revision 10030  Directory Listing
Modified Sat Jul 25 13:25:00 2009 UTC (8 years, 1 month ago) by hjohnson
Original Path: trunk
COMP:  Made function static to avoid duplicate symbol linker errors.

Revision 10029  Directory Listing
Modified Sat Jul 25 05:20:10 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: compute the eigenvectors of the covariance matrix to display the gaussian distribution

Revision 10028  Directory Listing
Modified Sat Jul 25 03:18:29 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk
ENH: added OpenCV module.

Revision 10027  Directory Listing
Modified Sat Jul 25 03:15:36 2009 UTC (8 years, 1 month ago) by hliu
Original Path: trunk
ENH: added OpenCV module.

Revision 10026  Directory Listing
Modified Sat Jul 25 00:05:08 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: load a label map to accurately create the class distributions

Revision 10025  Directory Listing
Modified Sat Jul 25 00:03:50 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: load a label map to accurately create the class distributions

Revision 10024  Directory Listing
Modified Sat Jul 25 00:03:37 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: load a label map to accurately create the class distributions

Revision 10023  Directory Listing
Modified Fri Jul 24 23:13:38 2009 UTC (8 years, 1 month ago) by sylvain
Original Path: trunk
ENH: itk classes to convert between vtk images and itk images

Revision 10022  Directory Listing
Modified Fri Jul 24 20:09:18 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
BUG-FIXED: 606
Adjust min/max translation sliders range based on MRML matrix +-30%

Revision 10021  Directory Listing
Modified Fri Jul 24 19:58:17 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: cropping in GPU ray cast II

Revision 10020  Directory Listing
Modified Fri Jul 24 19:32:24 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: adding GPU ray cast II

Revision 10018  Directory Listing
Modified Fri Jul 24 15:54:07 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
BUG-FIXED: 603
Disable rendering during scene loading
fixed crash when rendering while loading scene.

Revision 10017  Directory Listing
Modified Fri Jul 24 15:49:39 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
BUG: fixed crash when selecting GPU ray casting II

Revision 10016  Directory Listing
Modified Fri Jul 24 15:09:59 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
BUG-FIXED: 0000594
Check the interpolated point using IsInsideBuffer

Revision 10014  Directory Listing
Modified Thu Jul 23 22:21:31 2009 UTC (8 years, 1 month ago) by alexy
Original Path: trunk
BUG_FIXED: new Volume Rendering architecture

Revision 10013  Directory Listing
Modified Thu Jul 23 22:15:27 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
ENH: example scripts for interacting with MRML API

Revision 10012  Directory Listing
Modified Thu Jul 23 20:36:18 2009 UTC (8 years, 1 month ago) by pieper
Original Path: trunk
BUG: missing method call - stubbing it out for now until the developer can fix it.

Revision 10011  Directory Listing
Modified Thu Jul 23 19:27:27 2009 UTC (8 years, 1 month ago) by vrnova
Original Path: trunk
ENH: adding GPU ray cast II (multi-volume rendering)

Revision 10010  Directory Listing
Modified Thu Jul 23 18:07:49 2009 UTC (8 years, 1 month ago) by naucoin
Original Path: trunk
BUG: #604 check the class vars to make sure that they hold the known file formats

Revision 10009  Directory Listing
Modified Thu Jul 23 17:37:07 2009 UTC (8 years, 1 month ago) by tokuda
Original Path: trunk
BUG: Fixing problems related to MRML Scene events.

Revision 10008  Directory Listing
Modified Thu Jul 23 12:48:13 2009 UTC (8 years, 1 month ago) by millerjv
Original Path: trunk
BUG: fixed deliminators in environment paths for Windows.  BUG: removed /cygdrive designations

Revision 10007  Directory Listing
Modified Wed Jul 22 19:41:36 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: preparing GUI for GPU ray cast II

Revision 10006  Directory Listing
Modified Wed Jul 22 18:03:51 2009 UTC (8 years, 2 months ago) by millerjv
Original Path: trunk
ENH: Ordering registration modules

Revision 10005  Directory Listing
Modified Wed Jul 22 15:43:04 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: adding GPU ray cast II for multi-volume rendering (foreground, background, and labelmap)

Revision 10004  Directory Listing
Modified Wed Jul 22 15:29:27 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: adding GPU ray cast II for multi-volume rendering (foreground, background, and labelmap)

Revision 10003  Directory Listing
Modified Wed Jul 22 15:26:51 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: adding GPU ray cast II for multi-volume rendering (foreground, background, and labelmap)

Revision 10002  Directory Listing
Modified Wed Jul 22 15:12:48 2009 UTC (8 years, 2 months ago) by millerjv
Original Path: trunk
ENH: port from Slicer-3-4 branch to trunk

Revision 10001  Directory Listing
Modified Wed Jul 22 14:36:22 2009 UTC (8 years, 2 months ago) by hliu
Original Path: trunk
ENH: added OpenCV to the list of Slicer3 external libraries if it's turned ON.

Revision 10000  Directory Listing
Modified Wed Jul 22 14:35:16 2009 UTC (8 years, 2 months ago) by hliu
Original Path: trunk
ENH: added OpenCV to the list of Slicer3 external libraries if it's turned ON.

Revision 9998  Directory Listing
Modified Wed Jul 22 03:23:12 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk
ENH: minor fixes

Revision 9997  Directory Listing
Modified Wed Jul 22 03:20:03 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk
ENH: minor fixes

Revision 9996  Directory Listing
Modified Wed Jul 22 00:26:25 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: adding menu button to specify file order in manual loading mode

Revision 9995  Directory Listing
Modified Tue Jul 21 18:43:32 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
BUG: fix crash on exit due to uninitialized variable

Revision 9994  Directory Listing
Modified Tue Jul 21 17:42:26 2009 UTC (8 years, 2 months ago) by millerjv
Original Path: trunk
BUG: typo in file copy line. Typo in error reporting line

Revision 9993  Directory Listing
Modified Tue Jul 21 17:15:38 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: upgraded tooltip string

Revision 9992  Directory Listing
Modified Tue Jul 21 17:05:50 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: allow GPU ray cast to fully utilize high-end GPU

Revision 9991  Directory Listing
Modified Tue Jul 21 16:55:40 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
ENH: restructured rendering enabled, degenerate (?) cases not handled by the
algorithm may still cause troubles

Revision 9990  Directory Listing
Modified Tue Jul 21 16:15:53 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: stablize opengl texture mapper framerate adjustment algorithm

Revision 9988  Directory Listing
Modified Tue Jul 21 14:26:37 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: allow Opengl texture mapper to hold larger volume. The GPU memory size option controls both GPU ray casting and Opengl texture mapper now.

Revision 9987  Directory Listing
Modified Tue Jul 21 06:18:47 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: create the mesh for the moving image using tetrahedralization. STYLE: comply with VTK standards.

Revision 9986  Directory Listing
Modified Tue Jul 21 05:32:45 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk
ENH: minor fixed

Revision 9985  Directory Listing
Modified Tue Jul 21 04:52:02 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: remove debug comments to the standard output

Revision 9984  Directory Listing
Modified Tue Jul 21 04:48:04 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
BUG: remove duplicate declaration

Revision 9983  Directory Listing
Modified Tue Jul 21 04:20:12 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk
ENH: minor fixed

Revision 9982  Directory Listing
Modified Tue Jul 21 03:41:10 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: module to create a statistical atlas. This module complements the EMSegment module. It creates a statistical atlas using a set of pre-segmented label maps. This is a generic module not restricted to brain datasets.

Revision 9981  Directory Listing
Modified Tue Jul 21 03:39:39 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk
ENH: minor fixed

Revision 9980  Directory Listing
Modified Tue Jul 21 03:35:35 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk
ENH: minor fixed

Revision 9979  Directory Listing
Modified Tue Jul 21 03:15:10 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk
ENH: minor fixed

Revision 9978  Directory Listing
Modified Tue Jul 21 01:37:54 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: add preview window in the left panel. add mask creation from the input image: the user selects a threshold using a slider and the mask is created and rendered in real-time in the preview window.

Revision 9977  Directory Listing
Modified Mon Jul 20 20:52:34 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: hopefully temporary fix for infinite value of s

Revision 9976  Directory Listing
Modified Mon Jul 20 20:35:54 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: adding manual mode for image loading

Revision 9974  Directory Listing
Modified Mon Jul 20 19:23:18 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
STYLE: merge style fixes from 3.4 release branch

Revision 9971  Directory Listing
Modified Mon Jul 20 19:20:58 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
STYLE: clean out unused code

Revision 9970  Directory Listing
Modified Mon Jul 20 19:03:14 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
BUG: fix warning

Revision 9969  Directory Listing
Modified Mon Jul 20 19:00:42 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
BUG: a further fix for bug 76 and friends - make scale operate in integer slice space so that increments by clicking in the trough don't get incorrectly rounded to non-slice offsets

Revision 9967  Directory Listing
Modified Mon Jul 20 12:56:29 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
BUG: fix missing header declarations

Revision 9965  Directory Listing
Modified Mon Jul 20 03:21:20 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
COMP: Deleting vtkIGTLConnector class

Revision 9964  Directory Listing
Modified Mon Jul 20 03:12:51 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: Re-implementing connectors as MRML nodes.

Revision 9963  Directory Listing
Modified Fri Jul 17 20:12:03 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: remove all reference to vtkEMSegmentIntensityPreNormalization. This class is no longer in use.

Revision 9961  Directory Listing
Modified Fri Jul 17 19:58:40 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
BUG: avoid deleting from a map while an iterator is still active (caused crash on windows but on mac)

Revision 9959  Directory Listing
Modified Fri Jul 17 16:30:34 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
BUG: fix broken arrow keys when in linked slice mode

Revision 9958  Directory Listing
Modified Fri Jul 17 16:25:48 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: save/load user's choice on mappers

Revision 9957  Directory Listing
Modified Fri Jul 17 04:42:23 2009 UTC (8 years, 2 months ago) by hong
Original Path: trunk
BUG: locator position initialization by smkim

Revision 9956  Directory Listing
Modified Thu Jul 16 21:24:48 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: remove deleted files from CMakeLists.txt

Revision 9955  Directory Listing
Modified Thu Jul 16 20:44:16 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: remove directory and files that are not used anymore

Revision 9954  Directory Listing
Modified Thu Jul 16 13:05:11 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: merged recent GPU ray cast change in volumerendering to volumerendering1 to reduce possible overhead when replacing volumerendering with volumerendering1

Revision 9952  Directory Listing
Modified Thu Jul 16 01:22:50 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk
ENH: added new volume rendering module

Revision 9949  Directory Listing
Modified Wed Jul 15 20:11:29 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: the correct way of setting MRML observers propagated to the affected modules (followup for r9941)

Revision 9948  Directory Listing
Modified Wed Jul 15 18:14:05 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
ENH: compress some events that could cause extra processing

Revision 9946  Directory Listing
Modified Wed Jul 15 17:04:03 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
BUG: restore expected fps when select different rendering method

Revision 9945  Directory Listing
Modified Wed Jul 15 16:15:59 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
ENH: add information to volume names for the layers

Revision 9944  Directory Listing
Modified Wed Jul 15 16:11:19 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: corrected MRML event observer addition

Revision 9943  Directory Listing
Modified Wed Jul 15 15:53:56 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: propagating the change in the way MRML observers should be registered for VTK events (commit 9941)

Revision 9941  Directory Listing
Modified Wed Jul 15 15:34:32 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
BUG: add new method to lookup the standard VTK event numbers for strings (like ModifiedEvent).  This was required because the vtkCommand list of events was edited such that the old numbers were no longer valid

Revision 9940  Directory Listing
Modified Wed Jul 15 15:11:54 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
BUG: enable composite with shading by default

Revision 9939  Directory Listing
Modified Wed Jul 15 14:50:23 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: fragment shader program optimization

Revision 9938  Directory Listing
Modified Wed Jul 15 14:49:55 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: added composite with pseudo shading for low end GPU that is slow to do real shading

Revision 9936  Directory Listing
Modified Wed Jul 15 14:46:55 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
BUG: follow on fix to bugs 591 and 611.  When the AddArchetypeVolume tries to read a vtkMRMLVectorVolume we need to let it go through (but 591) but I believe the current code will also work for but 611, where a tensor volume should not be allowd to read into a scalar volume node

Revision 9935  Directory Listing
Modified Wed Jul 15 14:24:15 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: did not listen to the right event

Revision 9934  Directory Listing
Modified Tue Jul 14 21:49:42 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
COMP: removing unused headers

Revision 9933  Directory Listing
Modified Tue Jul 14 21:43:54 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
COMP: fixing headers

Revision 9932  Directory Listing
Modified Tue Jul 14 21:42:46 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
COMP: fixing include file

Revision 9931  Directory Listing
Modified Tue Jul 14 20:38:00 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: fixing leaks, delete extra kw widgets that were missing Delete calls

Revision 9930  Directory Listing
Modified Tue Jul 14 17:21:35 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: really fixing the memory leak this time

Revision 9929  Directory Listing
Modified Tue Jul 14 16:39:18 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: disable vol rendering for now

Revision 9928  Directory Listing
Modified Tue Jul 14 16:35:29 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
ENH: restructuring

Revision 9927  Directory Listing
Modified Tue Jul 14 16:05:15 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
COMP: compiler warning, cast

Revision 9926  Directory Listing
Modified Tue Jul 14 15:45:15 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
COMP: reducing compiler warnings

Revision 9925  Directory Listing
Modified Tue Jul 14 15:33:09 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: avoiding crash on exit by init BiasIntensityScale to null

Revision 9924  Directory Listing
Modified Tue Jul 14 15:02:19 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk
ENH: unscaled trafo fix

Revision 9923  Directory Listing
Modified Mon Jul 13 21:57:45 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: cleaning up memory leak caused by removing a different observer on the logic than was added 

Revision 9922  Directory Listing
Modified Mon Jul 13 21:32:56 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: fix conversion from double to unsigned int

Revision 9921  Directory Listing
Modified Mon Jul 13 21:28:26 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
STYLE: rename variables, avoid abbreviations, use meaningfull names, comply with VTK standards

Revision 9920  Directory Listing
Modified Mon Jul 13 21:10:42 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
ENH: enabled FastMarching for testing

Revision 9919  Directory Listing
Modified Mon Jul 13 19:22:11 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: fixing bugs caused by incorrect assumptions about VTK memory
management

Revision 9918  Directory Listing
Modified Mon Jul 13 18:35:01 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: asign instead of compare

Revision 9917  Directory Listing
Modified Mon Jul 13 18:16:12 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: memory management, avoiding crash on exit.

Revision 9916  Directory Listing
Modified Mon Jul 13 15:45:08 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
BUGFIX: GPU ray casting shading algorithm

Revision 9915  Directory Listing
Modified Mon Jul 13 15:42:53 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: fix warnings about conversions from double to unsigned int

Revision 9914  Directory Listing
Modified Mon Jul 13 15:18:52 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: fix warnings for unused variables. STYLE: comply with VTK standards

Revision 9913  Directory Listing
Modified Mon Jul 13 14:45:58 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: replace round(value) with (int)(value+0.5) to fix compilation on Windows

Revision 9912  Directory Listing
Modified Mon Jul 13 14:44:22 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: improve speed, remove unnecessary conversions of images, add error messages. STYLE: comply with VTK standards

Revision 9911  Directory Listing
Modified Fri Jul 10 22:36:09 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG:(s) disabled FastMarching -- not ready for public use at the moment

Revision 9910  Directory Listing
Modified Fri Jul 10 22:32:39 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: fixing memory leak

Revision 9909  Directory Listing
Modified Fri Jul 10 22:27:20 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: fixing a memory leak, forgot to move the Transform vars outside the vtk version check

Revision 9908  Directory Listing
Modified Fri Jul 10 22:13:19 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: cleaning up memory leaks

Revision 9907  Directory Listing
Modified Fri Jul 10 20:59:02 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: reducing memory leaks

Revision 9906  Directory Listing
Modified Fri Jul 10 19:09:39 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
COMP: getting rid of compiler warnings, casting mostly

Revision 9905  Directory Listing
Modified Fri Jul 10 19:06:51 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
BUG: SignalToConcent(self, signal) and ConcentToSignal(self, concent)

Revision 9904  Directory Listing
Modified Fri Jul 10 18:29:29 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: cleaning up crash on exit problems, init vars, use TearDownGUI

Revision 9903  Directory Listing
Modified Fri Jul 10 18:29:04 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: changing integration method.

Revision 9902  Directory Listing
Modified Fri Jul 10 18:28:13 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
COMP: compile with vtk 5.4

Revision 9901  Directory Listing
Modified Fri Jul 10 17:33:37 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
BUG: fix Built flag setting to avoid getting observers added twice to buttons and avoid calling update idletasks since that caused build GUI to be called twice (should not update idletasks from withing BuildGUI)

Revision 9900  Directory Listing
Modified Fri Jul 10 16:53:45 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
BUG: fix the Gaussian 2D callbacks

Revision 9899  Directory Listing
Modified Fri Jul 10 16:45:29 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
BUG: fix the Gaussian 2D callbacks

Revision 9898  Directory Listing
Modified Fri Jul 10 15:31:37 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: commandline testing script

Revision 9897  Directory Listing
Modified Fri Jul 10 11:33:32 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: putting some multi-thread testing codes ... 

Revision 9896  Directory Listing
Modified Fri Jul 10 01:57:53 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: Updated tool tip text on the GPU memory size option.

Revision 9895  Directory Listing
Modified Thu Jul 9 19:24:53 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: fix the speed issue when rendering the 2D Gaussian distributions. STYLE: fix variable names to comply with VTK standards.

Revision 9894  Directory Listing
Modified Thu Jul 9 18:39:07 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
COMP: fix array delete call

Revision 9893  Directory Listing
Modified Thu Jul 9 18:12:02 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: trying to get crash on exit cleared up (not deleting colorStorageNode1

Revision 9891  Directory Listing
Modified Thu Jul 9 03:17:23 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: GPU ray cast by default with shading

Revision 9890  Directory Listing
Modified Thu Jul 9 03:16:48 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: internal texture size now depends on user specified GPU video memory size.

Revision 9888  Directory Listing
Modified Wed Jul 8 21:14:40 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: remove classes created for debugging purposed

Revision 9887  Directory Listing
Modified Wed Jul 8 20:27:26 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
BUG: fix missing variable in non-ipython fallback case

Revision 9886  Directory Listing
Modified Wed Jul 8 19:53:37 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: include vtkEMSegment.h to define the symbol VTK_EMSEGMENT_EXPORT

Revision 9885  Directory Listing
Modified Wed Jul 8 19:50:47 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: make vtkGaussian2DWidget inherit from vtkKWRenderWidget and not from vtkKWCompositeWidget

Revision 9884  Directory Listing
Modified Wed Jul 8 18:53:20 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: add VTK_EMSEGMENT_EXPORT symbol for building libraries on Windows

Revision 9883  Directory Listing
Modified Wed Jul 8 18:33:46 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: set the ruler text scale so that it doesn't change as the line length changes. Removed compiler warning. Changed default location of the ruler so it shows up better when in default 3d view

Revision 9882  Directory Listing
Modified Wed Jul 8 17:51:55 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
ENH: more descriptive names

Revision 9881  Directory Listing
Modified Wed Jul 8 17:29:03 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
ENH: allow to control ROI visibility, minor improvements

Revision 9880  Directory Listing
Modified Wed Jul 8 16:27:05 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
ENH: allow to select interpolator

Revision 9879  Directory Listing
Modified Wed Jul 8 16:04:50 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk
BUG_FIXED: initialized Volume Rendering

Revision 9878  Directory Listing
Modified Wed Jul 8 02:34:50 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
BUG: fixing invalid free() call.

Revision 9877  Directory Listing
Modified Wed Jul 8 02:20:21 2009 UTC (8 years, 2 months ago) by tgl
Original Path: trunk
ENH store default location with ExtensionsInstallPathDefault

Revision 9876  Directory Listing
Modified Wed Jul 8 01:53:55 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: added multi-threaded map generation. (it doesn't work currently....)

Revision 9875  Directory Listing
Modified Tue Jul 7 23:42:13 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: add button to select the rendering type of the gaussian 2D widget. The rendering can either be 2D or 3D.

Revision 9874  Directory Listing
Modified Tue Jul 7 22:22:02 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
ENH: make sure inputs are not under transforms

Revision 9873  Directory Listing
Modified Tue Jul 7 22:10:59 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
ENH: removed some of the dead code

Revision 9872  Directory Listing
Modified Tue Jul 7 21:23:13 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: add vtkGaussian2DWidget.cxx to the list of source files. This class was added in the EMSegment Wizard to model the intensity classes using Gaussian distributions.

Revision 9871  Directory Listing
Modified Tue Jul 7 21:04:10 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk
ENH: new architecture for Volume rendering modules

Revision 9870  Directory Listing
Modified Tue Jul 7 21:02:36 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: intensity shift to handle negative values, corrected scale value

Revision 9869  Directory Listing
Modified Tue Jul 7 20:37:19 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: replace round with (int)(value+0.5) to fix compilation error on Windows. STYLE: expand abbreviations with full variable name. fix indentation

Revision 9868  Directory Listing
Modified Tue Jul 7 18:18:18 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: replace round with (int)(value+0.5) to fix compilation error on Windows. STYLE: expand abbreviations with full variable name. fix indentation

Revision 9867  Directory Listing
Modified Tue Jul 7 16:44:51 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: add missing class variables to the EMSegment to manipulate the Gaussian 2D Widget.

Revision 9866  Directory Listing
Modified Tue Jul 7 15:44:23 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk
BUG-FIXED: fixed crash on startup

Revision 9865  Directory Listing
Modified Tue Jul 7 15:22:56 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: ROI label off by 1

Revision 9864  Directory Listing
Modified Tue Jul 7 15:16:40 2009 UTC (8 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: oops, including .h file with new method declaration

Revision 9863  Directory Listing
Modified Tue Jul 7 14:03:36 2009 UTC (8 years, 2 months ago) by taox
Original Path: trunk
ENH: loading dicom header the hard way.

Revision 9862  Directory Listing
Modified Tue Jul 7 04:06:28 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: classes for the visualization of 2D Gaussian distributions in EM Segment. The intensity distributions of classes are modeled as a Gaussian. The interface of vtkGaussian2DWidget allows for the manipulation of two volumes, each volume being represented along one axis.

Revision 9861  Directory Listing
Modified Tue Jul 7 03:16:03 2009 UTC (8 years, 2 months ago) by tgl
Original Path: trunk
BUG set ::Extpath to the empty string on construction

Revision 9860  Directory Listing
Modified Mon Jul 6 23:38:43 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: the Windows compiler does not like allocation like this: double values[number]. The fix was to replace it with: double *values = new double[number]

Revision 9859  Directory Listing
Modified Mon Jul 6 23:20:18 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
COMP: add missiong method declaration

Revision 9858  Directory Listing
Modified Mon Jul 6 22:12:56 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: deep copy image data to preserve segmentation from being destroyed
in the subsequent invocation of the fast marching filter

Revision 9857  Directory Listing
Modified Mon Jul 6 21:23:16 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
ENH: input image is now rescaled to have range of 300 prior to
segmentation to provide acceptable performance for typical brain 
volumes with large intensity ranges

Revision 9855  Directory Listing
Modified Mon Jul 6 20:49:12 2009 UTC (8 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: making some room to the right of the error log icon so Mac's resize widget doesn't overlap

Revision 9854  Directory Listing
Modified Mon Jul 6 14:44:31 2009 UTC (8 years, 2 months ago) by hliu
Original Path: trunk
ENH: development work at MIT project week 2009.

Revision 9853  Directory Listing
Modified Mon Jul 6 14:41:09 2009 UTC (8 years, 2 months ago) by hliu
Original Path: trunk
ENH: development work at MIT project week 2009.

Revision 9851  Directory Listing
Modified Sun Jul 5 19:23:04 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: Using time stamp information in TimeSeriesBundleNode.

Revision 9850  Directory Listing
Modified Sun Jul 5 19:22:31 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: Set default frame rate 1 s. Calling Modified() funciton on setting time stamps in TimeSeriesBundleNode.

Revision 9849  Directory Listing
Modified Sun Jul 5 16:52:39 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
PERF: compile Python code in the C++ class

Revision 9848  Directory Listing
Modified Sat Jul 4 19:49:56 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: fixing compile warninigs

Revision 9847  Directory Listing
Modified Sat Jul 4 05:30:41 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
PERF: reducing number of Python code generation

Revision 9846  Directory Listing
Modified Sat Jul 4 04:51:53 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: adding progress meter for map generation

Revision 9845  Directory Listing
Modified Sat Jul 4 03:55:04 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
BUG: Fixing a problem that parameters are not passed to the curve analysis script during map generation.

Revision 9844  Directory Listing
Modified Fri Jul 3 15:19:03 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk
BUG_FIXED: fixed crash on startup in vtkSlicerApplication

Revision 9843  Directory Listing
Modified Fri Jul 3 14:51:33 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
STYLE: formatting

Revision 9842  Directory Listing
Modified Thu Jul 2 20:23:23 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: memory leak

Revision 9841  Directory Listing
Modified Thu Jul 2 20:10:26 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
COMP: workaround for method name that matches windows macro

Revision 9840  Directory Listing
Modified Thu Jul 2 18:34:03 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
BUG: fixed GUI panel repositioning when switching to different tabs (UseFrameWithScrollbarsOn())

Revision 9839  Directory Listing
Modified Thu Jul 2 18:00:27 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: multi-threaded gradients calculation in GPU ray casting. By default using number_of_CPU threads.

Revision 9838  Directory Listing
Modified Thu Jul 2 16:29:55 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
BUG: commit Attila's fix for typo

Revision 9837  Directory Listing
Modified Thu Jul 2 15:50:31 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: Activating FourDImage module.

Revision 9835  Directory Listing
Modified Wed Jul 1 17:26:18 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
BUG: fixed crash when switching internal volume size limit

Revision 9834  Directory Listing
Modified Wed Jul 1 16:15:30 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: non-power-of-two texture support in GPU ray casting

Revision 9833  Directory Listing
Modified Wed Jul 1 00:47:37 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG/ENH: new class added to generate rectangle mask. This class was/is also
available in ChangeTracker, but now needed by ExtractSubvolumeROI module, thus 
broken dependency...

Revision 9832  Directory Listing
Modified Tue Jun 30 21:11:25 2009 UTC (8 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing backface cull and color, got rid of multiple pass crash and crash on exit

Revision 9831  Directory Listing
Modified Tue Jun 30 20:44:46 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
STYLE: changing documentation URL.

Revision 9830  Directory Listing
Modified Tue Jun 30 20:16:23 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
STYLE: changing panel name

Revision 9829  Directory Listing
Modified Tue Jun 30 20:07:27 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
STYLE: changing panel titles

Revision 9828  Directory Listing
Modified Tue Jun 30 18:19:33 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
ENH: allow user to turn off volume rendering

Revision 9827  Directory Listing
Modified Tue Jun 30 17:55:34 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
BUG: invalid timescroll updates fixed

Revision 9826  Directory Listing
Modified Tue Jun 30 17:44:11 2009 UTC (8 years, 2 months ago) by fedorov
Original Path: trunk
ENH: bugfixes, improved interaction, corrected instructions

Revision 9825  Directory Listing
Modified Tue Jun 30 13:01:59 2009 UTC (8 years, 2 months ago) by millerjv
Original Path: trunk
ENH: Pass diffusion weighted, diffusion tensor, and general vector images through memory to shared object command line modules instead of files. \nNOTE: RAS to LPS conversions are performed on the measurement frames which should be correct for DW and DT data.  However, general vector images are probably not handled properly here (or elsewhere in Slicer) where an RAS to LPS conversion should modify components of each vector (flip the sign on x and y components.

Revision 9824  Directory Listing
Modified Tue Jun 30 12:42:42 2009 UTC (8 years, 2 months ago) by millerjv
Original Path: trunk
BUG: cleanup libraries

Revision 9823  Directory Listing
Modified Mon Jun 29 21:17:22 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: import scalar volume nodes by node name

Revision 9822  Directory Listing
Modified Mon Jun 29 19:21:54 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
BUG: gradient calculation

Revision 9821  Directory Listing
Modified Mon Jun 29 17:56:54 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: changed GPU ray cast mapper internal texture storage format for adding new features

Revision 9820  Directory Listing
Modified Mon Jun 29 17:07:23 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: avoid triggering an unknown type error message when adding default colour table nodes

Revision 9819  Directory Listing
Modified Mon Jun 29 16:56:25 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk
ENH: stochastic tractography batch version with parallelization support

Revision 9818  Directory Listing
Modified Mon Jun 29 16:53:39 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk
ENH: stochastic tractography batch version with parallelization support

Revision 9817  Directory Listing
Modified Mon Jun 29 16:40:10 2009 UTC (8 years, 2 months ago) by jvs
Original Path: trunk
ENH: stochastic tractography batch version with parallelization support

Revision 9816  Directory Listing
Modified Mon Jun 29 10:53:34 2009 UTC (8 years, 2 months ago) by lantiga
Original Path: trunk
ENH: removing legacy Python modules. These have been moved to the Slicer wiki to be used as samples for developers.

Revision 9815  Directory Listing
Modified Mon Jun 29 03:19:21 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
ENH: Time series node can be created from node selector.

Revision 9814  Directory Listing
Modified Sun Jun 28 21:27:00 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
STYLE: changing class name: vtkMRML4DBundleNode -> vtkMRMLTimeSeriesBundleNode

Revision 9813  Directory Listing
Modified Sun Jun 28 21:19:52 2009 UTC (8 years, 2 months ago) by tokuda
Original Path: trunk
STYLE: changing class name: vtkMRML4DBundleNode -> vtkMRMLTimeSeriesBundleNode

Revision 9812  Directory Listing
Modified Sat Jun 27 22:20:53 2009 UTC (8 years, 2 months ago) by hjohnson
Original Path: trunk
ENH: Added more data to the extension.

Revision 9811  Directory Listing
Modified Sat Jun 27 17:58:36 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: shader program optimization: different shader for different data type (1, 2, 4, components), reduce if... statement in shader program for better performance

Revision 9810  Directory Listing
Modified Sat Jun 27 04:10:15 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: enable the compilation of the MRI Bias Field Correction module developed at the NA-MIC Week at MIT June 22-26, 2009

Revision 9809  Directory Listing
Modified Sat Jun 27 02:39:00 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: new feature (MI-MIP)

Revision 9808  Directory Listing
Modified Sat Jun 27 01:16:28 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: GPU ray casting optimization

Revision 9807  Directory Listing
Modified Fri Jun 26 23:41:19 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: cleaning up (256)

Revision 9806  Directory Listing
Modified Fri Jun 26 21:11:02 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: take out the default collections, use ours

Revision 9805  Directory Listing
Modified Fri Jun 26 18:24:17 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: cleaning up (2048 vs 256)

Revision 9804  Directory Listing
Modified Fri Jun 26 15:59:29 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: skip unknown color nodes

Revision 9803  Directory Listing
Modified Fri Jun 26 15:11:07 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
ENH: new extension from Hans and company at UIowa

Revision 9802  Directory Listing
Modified Fri Jun 26 14:57:40 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: first pass at using the color node of the volume being edited.

Revision 9801  Directory Listing
Modified Fri Jun 26 14:49:50 2009 UTC (8 years, 2 months ago) by hjohnson
Original Path: trunk
ENH: Updated to ITK 3.14

Revision 9800  Directory Listing
Modified Thu Jun 25 21:56:57 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
ENH: take out the spl brain atlas hard coded colour node, use the file. Take out the FreeSurfer surface lables colour node. Add descriptions to a lot of the nodes

Revision 9799  Directory Listing
Modified Thu Jun 25 21:53:31 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: take out the FreeSurfer surface colours file, rename some labels

Revision 9798  Directory Listing
Modified Thu Jun 25 21:49:59 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
BUG: don't use the surface labels FS color node any more

Revision 9797  Directory Listing
Modified Thu Jun 25 21:46:37 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
STYLE: took out debugging print outs

Revision 9796  Directory Listing
Modified Thu Jun 25 20:59:28 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
STYLE: added node names and descriptions to the help page for all the colour table nodes

Revision 9795  Directory Listing
Modified Thu Jun 25 20:53:21 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: New feature: Volumetric depth peeling in GPU ray casting.

Revision 9794  Directory Listing
Modified Thu Jun 25 19:09:55 2009 UTC (8 years, 2 months ago) by taox
Original Path: trunk
ENH: added fuzzy segmentation module as an extension.

Revision 9793  Directory Listing
Modified Thu Jun 25 19:07:27 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk
ENH: added integration step for label seeding

Revision 9792  Directory Listing
Modified Thu Jun 25 14:36:38 2009 UTC (8 years, 2 months ago) by pieper
Original Path: trunk
ENH: new extension

Revision 9791  Directory Listing
Modified Thu Jun 25 13:49:38 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk
ENH: added Update Volume Display On Load option

Revision 9789  Directory Listing
Modified Wed Jun 24 22:16:46 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
ENH: add the slicer mrml color table nodes to the application color picker dialog. Requires an update of KWWidgets.

Revision 9788  Directory Listing
Modified Wed Jun 24 21:41:14 2009 UTC (8 years, 2 months ago) by millerjv
Original Path: trunk
BUG: bounds test was backwards

Revision 9787  Directory Listing
Modified Wed Jun 24 18:59:31 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
ENH: the affine widget works under 5.2

Revision 9786  Directory Listing
Modified Wed Jun 24 18:20:46 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
ENH: adding affine widget, works with vtk 5.4

Revision 9782  Directory Listing
Modified Wed Jun 24 15:59:39 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: minor optimization (avoid division in double/triple for loops when calculating gradients)

Revision 9781  Directory Listing
Modified Wed Jun 24 15:58:14 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: minor GUI update

Revision 9780  Directory Listing
Modified Wed Jun 24 15:30:28 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: GPU ray casting GUI minor update
ENH: gradient progress bar behavior change: using external progress bar right now for 4D rendering

Revision 9779  Directory Listing
Modified Wed Jun 24 15:30:14 2009 UTC (8 years, 2 months ago) by vrnova
Original Path: trunk
ENH: GPU ray casting GUI minor update
ENH: gradient progress bar behavior change: using external progress bar right now for 4D rendering

Revision 9778  Directory Listing
Modified Wed Jun 24 15:19:25 2009 UTC (8 years, 2 months ago) by alexy
Original Path: trunk
ENH: ROI seeding of streamlines allows arbitrary ROI volume (different voxels than tensor). However external transforms applied to the volumes are still ignored because not passed to CLI.

Revision 9776  Directory Listing
Modified Wed Jun 24 14:19:09 2009 UTC (8 years, 2 months ago) by demian
Original Path: trunk
ENH: Handling of an unique pyhon interactor window

Revision 9774  Directory Listing
Modified Tue Jun 23 23:29:09 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: create a command line functionality for the mri bias field correction module. add testing

Revision 9773  Directory Listing
Modified Tue Jun 23 20:15:41 2009 UTC (8 years, 2 months ago) by naucoin
Original Path: trunk
COMP: build with vtk 5.4

Revision 9772  Directory Listing
Modified Tue Jun 23 19:11:22 2009 UTC (8 years, 2 months ago) by tgl
Original Path: trunk
ENH copy edit

Revision 9771  Directory Listing
Modified Tue Jun 23 19:07:28 2009 UTC (8 years, 2 months ago) by tgl
Original Path: trunk
BUG set potential module paths, enabling the new modules

Revision 9770  Directory Listing
Modified Tue Jun 23 19:05:54 2009 UTC (8 years, 2 months ago) by tgl
Original Path: trunk
ENH add and implement helper method for appending to potential module paths

Revision 9769  Directory Listing
Modified Tue Jun 23 17:13:27 2009 UTC (8 years, 2 months ago) by millerjv
Original Path: trunk
BUG: need to echo more than one t on a checkout if repositories with invalid certificates reference external repositories with invalid certificates AND ignore the error caused by closing the pipe while the command yes is running

Revision 9768  Directory Listing
Modified Tue Jun 23 16:44:22 2009 UTC (8 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: restting GUI panel width to default width on exit from module

Revision 9767  Directory Listing
Modified Tue Jun 23 16:35:37 2009 UTC (8 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: resetting GUI panel width to default width on exit from module

Revision 9766  Directory Listing
Modified Tue Jun 23 15:49:19 2009 UTC (8 years, 2 months ago) by tgl
Original Path: trunk
ENH remove ExtensionsDownloadDirectory, obsolete, use TemporaryDirectory

Revision 9765  Directory Listing
Modified Tue Jun 23 15:32:18 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
BUG: fix warnings. remove unused variables. improve coding style

Revision 9764  Directory Listing
Modified Tue Jun 23 15:30:52 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
BUG: fix warnings. remove unused variables. improve coding style

Revision 9763  Directory Listing
Modified Tue Jun 23 15:04:34 2009 UTC (8 years, 2 months ago) by tgl
Original Path: trunk
ENH rename ModuleCachePath to ExtensionsInstallPath

Revision 9762  Directory Listing
Modified Tue Jun 23 14:22:26 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
COMP: fix warnings. remove unused variables. improve coding style

Revision 9761  Directory Listing
Modified Tue Jun 23 10:40:21 2009 UTC (8 years, 2 months ago) by taox
Original Path: trunk
STYLE: typo.

Revision 9760  Directory Listing
Modified Tue Jun 23 10:39:34 2009 UTC (8 years, 2 months ago) by taox
Original Path: trunk
ENH: skull stripping module using Slicer Extension mechanism.

Revision 9759  Directory Listing
Modified Mon Jun 22 20:40:11 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
BUG: fix semi-colon typo. remove unused variables.

Revision 9758  Directory Listing
Modified Mon Jun 22 17:58:52 2009 UTC (8 years, 2 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: moving from module to base

Revision 9757  Directory Listing
Modified Mon Jun 22 17:00:51 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: create features to improve the usability of the EM Module. The goal is to enable the clinician to perform segmentation by expectation maximization in an efficient fashion. Among other features, an histogram visualization window has been implemented to let the user select the different percentages for the EM classes within an intuitive user interface.

Revision 9756  Directory Listing
Modified Mon Jun 22 17:00:44 2009 UTC (8 years, 2 months ago) by sylvain
Original Path: trunk
ENH: create features to improve the usability of the EM Module. The goal is to enable the clinician to perform segmentation by expectation maximization in an efficient fashion. Among other features, an histogram visualization window has been implemented to let the user select the different percentages for the EM classes within an intuitive user interface.

Revision 9755  Directory Listing
Modified Mon Jun 22 16:26:23 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding code under development; not exposed to build

Revision 9754  Directory Listing
Modified Mon Jun 22 16:14:49 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk
ENH: create features to improve the usability of the EM Module. The goal is to enable the clinician to perform segmentation by expectation maximization in an efficient fashion. Among other features, an histogram visualization window has been implemented to let the user select the different percentages for the EM classes within an intuitive user interface.

Revision 9753  Directory Listing
Modified Mon Jun 22 15:31:00 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk
ENH: remove old files for the MRI Bias Field Correction module. This module is now in the Slicer3/Module directory. The interface of the new module has been reworked and the code has been improved.

Revision 9752  Directory Listing
Modified Mon Jun 22 15:24:11 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk
ENH: add a module for MRI bias field correction. This module takes an MRI volume and a mask and correct the intensity inhomogeneity in the MRI volume. The algorithm builds upon the non-uniform non-parametric intensity normalization (N3) method of Styner et al. The implementation is based on Nick Tustison's classes as well as new classes for the Slicer3 logic and the user interface.

Revision 9751  Directory Listing
Modified Mon Jun 22 04:39:13 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
STYLE: changing names of functions and variables

Revision 9748  Directory Listing
Modified Mon Jun 22 00:11:54 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk
ENH: fixed one of the sampling issues

Revision 9747  Directory Listing
Modified Sun Jun 21 20:37:13 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk
BUG: image data installed

Revision 9746  Directory Listing
Modified Sun Jun 21 20:35:19 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk
BUG: incorrect reference to image data fixed

Revision 9745  Directory Listing
Modified Sat Jun 20 21:44:22 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
ENH: working on parameter map function.

Revision 9744  Directory Listing
Modified Sat Jun 20 21:15:56 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
BUG: fixed runtime error on Windows (tried to use an uninitialized variable)

Revision 9743  Directory Listing
Modified Sat Jun 20 20:56:03 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
BUG: chaging arguments for vtkFourDImageLogic::LoadImagesFromDir()

Revision 9742  Directory Listing
Modified Sat Jun 20 20:43:16 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
BUG: initial contrast setting

Revision 9741  Directory Listing
Modified Sat Jun 20 20:24:23 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
ENH: Changing play/pause buttons in Frame Control

Revision 9739  Directory Listing
Modified Fri Jun 19 20:31:17 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
BUG: handle missing return code

Revision 9737  Directory Listing
Modified Fri Jun 19 19:06:40 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk
ENH: progress bar enabled

Revision 9736  Directory Listing
Modified Fri Jun 19 18:19:43 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk
ENH: binarize / fiducial2labelmaps

Revision 9735  Directory Listing
Modified Fri Jun 19 18:02:23 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk
ENH: ijk/ras switch

Revision 9734  Directory Listing
Modified Fri Jun 19 16:24:57 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk
STYLE: cleanup

Revision 9733  Directory Listing
Modified Fri Jun 19 15:48:32 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk
ENH: improved precision of ROI resizing by in-slice clicks

Revision 9732  Directory Listing
Modified Fri Jun 19 13:25:36 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
ENH: Added FourDAnalysis module in CMakeLists.txt

Revision 9731  Directory Listing
Modified Fri Jun 19 03:50:44 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
ENH: added FourDAnalysis module.

Revision 9730  Directory Listing
Modified Fri Jun 19 03:47:11 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
BUG: changed the documentation URL in the help frame

Revision 9729  Directory Listing
Modified Thu Jun 18 22:43:21 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk
ENH: module for extracting and resampling a volume of interest from a
scalar volume -- initial commit. This is work in progress, a lot of
features are missing. This is committed in preparation for the 
programming week and to collect early feedback from Ron.

Revision 9728  Directory Listing
Modified Thu Jun 18 19:16:18 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
ENH: added more user interface.

Revision 9727  Directory Listing
Modified Thu Jun 18 16:33:30 2009 UTC (8 years, 3 months ago) by barre
Original Path: trunk
ENH: ugh. no SDK path?

Revision 9724  Directory Listing
Modified Thu Jun 18 16:06:30 2009 UTC (8 years, 3 months ago) by barre
Original Path: trunk
ENH: try harder. I give up. I'm not even asking for nmake, or Unix Makefiles on Win32, but just build on a Vista 64 bits running a 64 bits compiler. Fail.

Revision 9722  Directory Listing
Modified Thu Jun 18 15:42:06 2009 UTC (8 years, 3 months ago) by barre
Original Path: trunk
ENH: try harder

Revision 9721  Directory Listing
Modified Thu Jun 18 03:42:54 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding model mirror to build, though it still has some bugs

Revision 9720  Directory Listing
Modified Wed Jun 17 20:57:55 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
ENH: put icons on play/stop button

Revision 9719  Directory Listing
Modified Wed Jun 17 17:38:50 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding model mirroring framework. has bugs in logic, not added to modules CMakeLists.txt

Revision 9718  Directory Listing
Modified Wed Jun 17 15:24:41 2009 UTC (8 years, 3 months ago) by demian
Original Path: trunk
BUG: Plugin class now supports non vtkMRMLNode type parameters, without type validation

Revision 9717  Directory Listing
Modified Wed Jun 17 14:37:49 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
ENH: support paths for 32 and 64 bit solaris

Revision 9716  Directory Listing
Modified Wed Jun 17 13:48:48 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
ENH: include tcl binary dir in path for launching

Revision 9715  Directory Listing
Modified Wed Jun 17 13:37:10 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
STYLE: fix spelling errors identified by Dominique as part of the debian checkin process

Revision 9713  Directory Listing
Modified Tue Jun 16 22:21:40 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
BUG: removed module names not in the repository

Revision 9712  Directory Listing
Modified Tue Jun 16 22:03:00 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
BUG: removed modules, which do not exist in the repository, from CMakeList.txt. 

Revision 9711  Directory Listing
Modified Tue Jun 16 20:58:04 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk
BUG: fix from Attila Nagy to correctly identify Solaris

Revision 9710  Directory Listing
Modified Tue Jun 16 20:34:34 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk
BUG: extra dash in bitness for SunOS

Revision 9709  Directory Listing
Modified Tue Jun 16 20:26:14 2009 UTC (8 years, 3 months ago) by hayes
Original Path: trunk
BUG: debugging versioner script

Revision 9708  Directory Listing
Modified Tue Jun 16 17:36:33 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk
BUG: corrected command line

Slicer3 --launch RigidRegistration --fixedsmoothingfactor 0
--movingsmoothingfactor 0 --histogrambins 30 --spatialsamples 10000
--iterations 100,100,50,20 --learningrate 0.01,0.005,0.0005,0.0002
--translationscale 100 
~/projhome/data/RegistrationReproducibility/MRMeningioma0.nrrd
~/projhome/data/RegistrationReproducibility/MRMeningioma1.nrrd


Revision 9707  Directory Listing
Modified Tue Jun 16 16:09:12 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
ENH: added more user interface.

Revision 9706  Directory Listing
Modified Tue Jun 16 16:08:15 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
ENH: increased wizard widget height from 320 to 400.

Revision 9705  Directory Listing
Modified Tue Jun 16 15:48:01 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
ENH: Added FourDImage module.

Revision 9704  Directory Listing
Modified Tue Jun 16 15:21:45 2009 UTC (8 years, 3 months ago) by taox
Original Path: trunk
ENH: support siemens mosaic image in IS order.

Revision 9702  Directory Listing
Modified Mon Jun 15 21:18:37 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
BUG: add missing copyright file

Revision 9701  Directory Listing
Modified Mon Jun 15 21:00:00 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
ENH: continued development.

Revision 9700  Directory Listing
Modified Mon Jun 15 20:59:12 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
ENH: continued development.

Revision 9699  Directory Listing
Modified Mon Jun 15 20:37:16 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
BUG: merge compile fix for vs 2003 .NET from 3.4 branch

Revision 9698  Directory Listing
Modified Mon Jun 15 20:26:32 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
BUG: fix license text (with Stephen Aylward's permission)

Revision 9696  Directory Listing
Modified Mon Jun 15 14:18:49 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: commenting out the load/save progress feedback events being used by GUI to report progress; CLI modules using mrml to write data are causing these events to be invoked outside of the main thread and this is crashing GUI. Need to figure out how to invoke these events only from the main thread, or build another mechanism to provide feedback during loading and ssaving of large datasets...

Revision 9695  Directory Listing
Modified Sun Jun 14 21:00:31 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
BUG: removed class vtkKWGuideWidget from here.

Revision 9694  Directory Listing
Modified Sun Jun 14 21:00:24 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
BUG: removed class vtkKWGuideWidget from here.

Revision 9693  Directory Listing
Modified Sun Jun 14 20:53:32 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 9692  Directory Listing
Modified Sun Jun 14 20:51:59 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 9691  Directory Listing
Modified Sun Jun 14 20:51:14 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
ENH: added class vtkKWGuideWidget.

Revision 9690  Directory Listing
Modified Fri Jun 12 20:28:57 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
COMP: tcl wrapping ignores the ifdef

Revision 9689  Directory Listing
Modified Fri Jun 12 20:15:31 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
BUG: merge fixes from 3.4 release branch (module selection in test mode) plus suppress python warning in some cases

Revision 9688  Directory Listing
Modified Fri Jun 12 19:59:07 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
ENH: moved to a 3d line representation for the ruler, got it linked to models, still some debugging to do

Revision 9684  Directory Listing
Modified Fri Jun 12 00:41:35 2009 UTC (8 years, 3 months ago) by fedorov
Original Path: trunk
ENH: PrintSelf filled

Revision 9683  Directory Listing
Modified Thu Jun 11 13:45:24 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
BUG: make input file match re-generated output file

Revision 9681  Directory Listing
Modified Wed Jun 10 22:23:53 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
STYLE: var name changes, adding frames. Still working on getting the ruler attached to a model

Revision 9680  Directory Listing
Modified Wed Jun 10 21:50:22 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
BUG: clarify license

Revision 9677  Directory Listing
Modified Wed Jun 10 21:42:23 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
BUG: fix license issues

Revision 9676  Directory Listing
Modified Wed Jun 10 21:29:33 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
BUG: add license info

Revision 9673  Directory Listing
Modified Wed Jun 10 20:49:16 2009 UTC (8 years, 3 months ago) by pieper
Original Path: trunk
BUG: remove incorrect license info

Revision 9671  Directory Listing
Modified Tue Jun 9 22:17:49 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
BUG: make the angle text readable with a scale of 10

Revision 9670  Directory Listing
Modified Tue Jun 9 22:09:46 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
BUG: cast so compiles on windows

Revision 9669  Directory Listing
Modified Tue Jun 9 22:00:49 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
ENH: putting in ifdefs to compile with vtk 5.4

Revision 9668  Directory Listing
Modified Tue Jun 9 20:31:12 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
ENH: adding Measurements module

Revision 9667  Directory Listing
Modified Tue Jun 9 20:30:44 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
ENH: first pass at VTK5.4 Measurements module, with ifdefs to compile with 5.2

Revision 9666  Directory Listing
Modified Tue Jun 9 20:29:01 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
BUG: init Index

Revision 9665  Directory Listing
Modified Tue Jun 9 19:59:04 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
ENH: exposing the measurements button in the toolbar if Slicer is compiled with VTK5.4 or later

Revision 9664  Directory Listing
Modified Tue Jun 9 15:35:30 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 9663  Directory Listing
Modified Tue Jun 9 15:34:18 2009 UTC (8 years, 3 months ago) by hliu
Original Path: trunk
ENH: added class vtkKWGuideWidget.

Revision 9662  Directory Listing
Modified Mon Jun 8 22:29:46 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
BUG: test the exit from genlib

Revision 9661  Directory Listing
Modified Mon Jun 8 22:28:38 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
BUG: another try at getting python building on windows with vsexpress

Revision 9660  Directory Listing
Modified Mon Jun 8 22:01:35 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
BUG: trying to work around the visual studio 9 express not taking the /Upgrade flag

Revision 9659  Directory Listing
Modified Mon Jun 8 21:41:57 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
STYLE: better error message

Revision 9658  Directory Listing
Modified Mon Jun 8 18:23:53 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding progress feedback in the status bar for load and save of data, addressing Ron's bug report 597 on Mantis

Revision 9657  Directory Listing
Modified Sun Jun 7 05:46:02 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk
ENH: add generic module for bias field correction of mri images. this module contains a threshold component to create a mask. the bias field correction is only applied under the mask. this has the advantage to improve the result and speed up the processing.

Revision 9655  Directory Listing
Modified Sun Jun 7 02:35:05 2009 UTC (8 years, 3 months ago) by tgl
Original Path: trunk
ENH only display the latest revision

Revision 9653  Directory Listing
Modified Sun Jun 7 01:58:38 2009 UTC (8 years, 3 months ago) by tgl
Original Path: trunk
BUG search from zip location, not the bad dash location

Revision 9652  Directory Listing
Modified Sat Jun 6 03:03:02 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk
ENH: add link to Slicer wiki documentation in the ackowledgement menu

Revision 9650  Directory Listing
Modified Thu Jun 4 18:12:46 2009 UTC (8 years, 3 months ago) by hayes
Original Path: trunk
ENH: RegionSelector Extension initial commit

Revision 9649  Directory Listing
Modified Thu Jun 4 18:11:36 2009 UTC (8 years, 3 months ago) by hayes
Original Path: trunk
ENH: LevelSetStepping Extension initial commit

Revision 9648  Directory Listing
Modified Wed Jun 3 20:36:27 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: getting rid of CDash complaints

Revision 9647  Directory Listing
Modified Wed Jun 3 20:33:35 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: getting rid of CDash complaints

Revision 9642  Directory Listing
Modified Wed Jun 3 19:09:42 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: making FetchMI keep metadata current on data loaded while FetchMI is not raised

Revision 9641  Directory Listing
Modified Wed Jun 3 19:08:38 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: improving feedback when navigating among modules

Revision 9640  Directory Listing
Modified Wed Jun 3 16:59:52 2009 UTC (8 years, 3 months ago) by hayes
Original Path: trunk
ENH: Adding ARCTIC extension

Revision 9639  Directory Listing
Modified Wed Jun 3 06:27:14 2009 UTC (8 years, 3 months ago) by sylvain
Original Path: trunk
ENH: enable the compilation of the module N3 MRI Bias Field Correction.

Revision 9638  Directory Listing
Modified Tue Jun 2 19:57:17 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
BUG: cleaning up some memory issues

Revision 9635  Directory Listing
Modified Mon Jun 1 15:12:09 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
BUG: fixed image position problem (vector lengths in the IMAGE message were not used to calculate the image center position)

Revision 9633  Directory Listing
Modified Sun May 31 13:17:16 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: cleaning up CDASH graffitti

Revision 9631  Directory Listing
Modified Fri May 29 20:48:17 2009 UTC (8 years, 3 months ago) by tokuda
Original Path: trunk
BUG: fixed bug that Slicer always centers imported images.

Revision 9630  Directory Listing
Modified Fri May 29 20:19:43 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk
ENH: gpu ray casting parameter adjustment

Revision 9625  Directory Listing
Modified Fri May 29 16:21:04 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added new event that signals that a node name has changed (for use in EditorGUI.tcl modification).

Revision 9624  Directory Listing
Modified Fri May 29 16:19:35 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added ability to select existing or create new label maps from existing volumes

Revision 9623  Directory Listing
Modified Fri May 29 14:26:11 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk
ENH: minor GUI adjustment on the performance tab

Revision 9622  Directory Listing
Modified Fri May 29 13:53:38 2009 UTC (8 years, 3 months ago) by vrnova
Original Path: trunk
BUG: fixed looping problem when re-entering volume rendering module

Revision 9620  Directory Listing
Modified Fri May 29 03:13:34 2009 UTC (8 years, 3 months ago) by jvs
Original Path: trunk
ENH: DTI conversion

Revision 9618  Directory Listing
Modified Thu May 28 14:39:33 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
STYLE: added contributor info

Revision 9612  Directory Listing
Modified Wed May 27 21:44:03 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
STYLE: changing the label text on the color selector widgets to say LUT instead of color

Revision 9609  Directory Listing
Modified Wed May 27 19:15:28 2009 UTC (8 years, 3 months ago) by clisle
Original Path: trunk
BUG: Added license for MIMX Meshing Module

Revision 9608  Directory Listing
Modified Wed May 27 19:06:47 2009 UTC (8 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: made node name editable in SaveDataWidget as per Ron's request

Revision 9603  Directory Listing
Modified Tue May 26 15:36:10 2009 UTC (8 years, 3 months ago) by naucoin
Original Path: trunk
BUG: up the widget width for the label to show four digits, to work with FreeSurfer FSLabels LUT

Revision 9598  Directory Listing
Modified Sat May 23 01:25:30 2009 UTC (8 years, 4 months ago) by jvs
Original Path: trunk
ENH: connectivity feature + code cleaning

Revision 9597  Directory Listing
Modified Fri May 22 22:22:13 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: added range widget for better precision

Revision 9596  Directory Listing
Modified Fri May 22 13:13:25 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: switch to transform view mode after segmentation; TODO:
SlicerToolbarGUI doesn't update on Modified()

Revision 9595  Directory Listing
Modified Fri May 22 12:33:55 2009 UTC (8 years, 4 months ago) by lantiga
Original Path: trunk
ENH: enhanced documentation and acknowledgements of Python scripts

Revision 9594  Directory Listing
Modified Thu May 21 21:39:48 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: added volume rendering, changed scroll-back event handling to
improve performance, fixed few minor issues

Revision 9591  Directory Listing
Modified Thu May 21 21:07:47 2009 UTC (8 years, 4 months ago) by barre
Original Path: trunk
ENH: debug leak...

Revision 9590  Directory Listing
Modified Thu May 21 19:11:24 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding fiber bundle handling into FetchMI

Revision 9589  Directory Listing
Modified Thu May 21 19:10:07 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: making sure two widgets are not getting assigned a master until master is cretaed

Revision 9588  Directory Listing
Modified Thu May 21 19:09:30 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding acknowledgement for CTSC

Revision 9587  Directory Listing
Modified Thu May 21 19:09:08 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding acknowledgement for CTSC

Revision 9586  Directory Listing
Modified Thu May 21 19:08:07 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding CTSC acknowledgement and updating description of loadable modules

Revision 9585  Directory Listing
Modified Thu May 21 19:06:48 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: cleaning up leaks

Revision 9584  Directory Listing
Modified Thu May 21 18:26:12 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new acknowledgement logo for CTSC

Revision 9581  Directory Listing
Modified Thu May 21 17:10:35 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: merging changes from branch into trunk: new www icon

Revision 9580  Directory Listing
Modified Thu May 21 16:10:24 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding ability to distinguish fiber bundles from vtk models in the add data widget

Revision 9579  Directory Listing
Modified Thu May 21 15:54:03 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing conflicts in merge from branch to trunk

Revision 9577  Directory Listing
Modified Thu May 21 13:14:39 2009 UTC (8 years, 4 months ago) by jvs
Original Path: trunk
ENH: minor bugfix

Revision 9576  Directory Listing
Modified Thu May 21 13:11:54 2009 UTC (8 years, 4 months ago) by jvs
Original Path: trunk
ENH: minor bugfix

Revision 9575  Directory Listing
Modified Thu May 21 09:16:16 2009 UTC (8 years, 4 months ago) by lantiga
Original Path: trunk
BUG: fix typo noticed by Jim Miller

Revision 9574  Directory Listing
Modified Thu May 21 05:54:19 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
ENH results of merge -r9483:9573 http://svn.slicer.org/Slicer3/branches/Slicer-3-4/Base/GUI .

Revision 9572  Directory Listing
Modified Wed May 20 21:19:03 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: committing a fix that hope will prevent unstable GUI resizing in Editor by allowing parent frame to expand

Revision 9571  Directory Listing
Modified Wed May 20 20:57:25 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: few more improvements

Revision 9569  Directory Listing
Modified Wed May 20 20:29:45 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: incremental improvements

Revision 9565  Directory Listing
Modified Tue May 19 22:21:29 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
STYLE: removing old license information

Revision 9562  Directory Listing
Modified Tue May 19 21:25:56 2009 UTC (8 years, 4 months ago) by barre
Original Path: trunk
ENH: fix linking issue in ChangeTrackerTest

Revision 9560  Directory Listing
Modified Tue May 19 21:10:22 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: reverting Slicer's theme -- taking modal settings out

Revision 9559  Directory Listing
Modified Tue May 19 20:30:15 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
BUG: support writing .vtk and .vtp files and reading them back into FS model nodes

Revision 9556  Directory Listing
Modified Tue May 19 19:39:07 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
BUG: make debug a flag accessible via the command line

Revision 9549  Directory Listing
Modified Tue May 19 17:16:41 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: GUI restructuring and simplification

Revision 9547  Directory Listing
Modified Tue May 19 16:11:35 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix leaking lookup table

Revision 9546  Directory Listing
Modified Tue May 19 16:01:35 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: merging fixes from 3.4 release branch

Revision 9541  Directory Listing
Modified Mon May 18 22:54:28 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: added ack logos

Revision 9540  Directory Listing
Modified Mon May 18 22:31:00 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: install logo image data

Revision 9538  Directory Listing
Modified Mon May 18 21:30:40 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
STYLE: warning

Revision 9537  Directory Listing
Modified Mon May 18 21:29:54 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: don't accelerate tool tips - may cause race conditions during updates

Revision 9536  Directory Listing
Modified Mon May 18 21:27:36 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
BUG: another header

Revision 9535  Directory Listing
Modified Mon May 18 21:18:29 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
BUG: missing header for windows

Revision 9533  Directory Listing
Modified Mon May 18 21:09:42 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: make the check point feature optional to avoid memory problems with large volumes (and small computers)

Revision 9531  Directory Listing
Modified Mon May 18 20:10:08 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
STYLE: fixed warnings

Revision 9530  Directory Listing
Modified Mon May 18 19:56:40 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
BUG: reorganization of the C++ dependency classes to fix portability
problem

Revision 9528  Directory Listing
Modified Mon May 18 19:28:55 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: need to set permissions when installing executables

Revision 9527  Directory Listing
Modified Mon May 18 19:16:23 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
BUG: incorrect name in win32 header

Revision 9525  Directory Listing
Modified Mon May 18 19:05:18 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
STYLE: include info the tooltip about output format

Revision 9524  Directory Listing
Modified Mon May 18 18:39:42 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: allow non-axial input files by resampling fixed and moving to axial before registration

Revision 9518  Directory Listing
Modified Sun May 17 20:52:38 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: remove unneeded file per suggestion from Dominique Belhachemi

Revision 9517  Directory Listing
Modified Sun May 17 20:42:53 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
ENH: new extension file from Daniel

Revision 9513  Directory Listing
Modified Sun May 17 19:01:55 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
ENH: new extension file from Daniel

Revision 9512  Directory Listing
Modified Sun May 17 17:49:19 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
BUG: wrong install target

Revision 9511  Directory Listing
Modified Sat May 16 16:00:18 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
BUG: debug image writes were accidentally commited earlier

Revision 9507  Directory Listing
Modified Fri May 15 23:01:43 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix external progress helper code

Revision 9506  Directory Listing
Modified Fri May 15 23:00:23 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix external progress helper for windows

Revision 9505  Directory Listing
Modified Fri May 15 21:15:07 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: Added FastMarchingSegmentation module, derived from the original
implementation by Eric Pichon in Slicer2. Reference:

Pichon E, Tannenbaum A, Kikinis R. A statistically based flow for image
segmentation. Med Image Anal. 2004 Sep;8(3):267-74. PMID: 15450221.

Revision 9504  Directory Listing
Modified Fri May 15 17:40:03 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
ENH: support for external progress indicator for rendering

Revision 9503  Directory Listing
Modified Fri May 15 17:06:37 2009 UTC (8 years, 4 months ago) by aylward
Original Path: trunk
BUG: Must check for null pointer


Revision 9502  Directory Listing
Modified Fri May 15 16:45:58 2009 UTC (8 years, 4 months ago) by vrnova
Original Path: trunk
ENH: code optimization for GPU ray cast with lighting

Revision 9499  Directory Listing
Modified Fri May 15 14:51:53 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: check in missing header desclaration of method for external progress bar

Revision 9498  Directory Listing
Modified Fri May 15 12:23:57 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: add namespace for mac compile

Revision 9497  Directory Listing
Modified Fri May 15 12:22:17 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: add namespace for mac compile

Revision 9495  Directory Listing
Modified Thu May 14 21:17:32 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix modal behavior

Revision 9494  Directory Listing
Modified Thu May 14 21:12:13 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: helper script for external progress process

Revision 9493  Directory Listing
Modified Thu May 14 21:11:42 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix dialog master window creation by waiting until the main slicer window is created for sure before setting the master window on the dialog. also BUG: add infrastructure for calling external program to provide progress updates

Revision 9487  Directory Listing
Modified Thu May 14 17:12:17 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
STYLE: fixed misleading comment and prescribed full output for ctest

Revision 9486  Directory Listing
Modified Thu May 14 16:29:16 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: added osirix style win/level presets, no icons yet. Extended the presets to include icon and colour strings, change the colour node as well by reaching up into the parent widget

Revision 9484  Directory Listing
Modified Thu May 14 13:20:06 2009 UTC (8 years, 4 months ago) by finetjul
Original Path: trunk
COMP: As BatchMake support is optional, don't include BatchMake in UseSlicer3 if Slicer3_USE_BatchMake is not set

Revision 9482  Directory Listing
Modified Thu May 14 04:20:58 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
ENH add cell window command to display full description summary

Revision 9481  Directory Listing
Modified Wed May 13 22:23:53 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: Added multiply filter and test

Revision 9480  Directory Listing
Modified Wed May 13 21:46:01 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
STYLE: updating the descriptions

Revision 9479  Directory Listing
Modified Wed May 13 21:39:43 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: Adding an image mask CLI and test

Revision 9478  Directory Listing
Modified Wed May 13 21:16:00 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
STYLE: fix a filter watcher comment string

Revision 9477  Directory Listing
Modified Wed May 13 20:45:26 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: added a button to center the 3d view on the last clicked fiducial in the multi column list

Revision 9476  Directory Listing
Modified Wed May 13 19:12:53 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
BUG: check that the volumes module is loaded before using it, and pop up an error box

Revision 9475  Directory Listing
Modified Wed May 13 18:13:44 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: add the image cast CLI

Revision 9473  Directory Listing
Modified Wed May 13 18:05:03 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
BUG: taking out non completed test

Revision 9472  Directory Listing
Modified Wed May 13 18:00:34 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: Cast volume CLI plus test

Revision 9471  Directory Listing
Modified Wed May 13 14:35:12 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: porting list visibility and locking and deleting changes from the trunk, using new icons

Revision 9469  Directory Listing
Modified Tue May 12 20:29:35 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
STYLE: cleanup of GUI and slice interaction

Revision 9468  Directory Listing
Modified Tue May 12 20:19:43 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix for bug 582 - go to home module on startup in --no-modules mode

Revision 9467  Directory Listing
Modified Tue May 12 19:19:23 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added slicer community to acknowledgement

Revision 9465  Directory Listing
Modified Tue May 12 18:51:21 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: tracking www icon to match loadable module wizard's version

Revision 9464  Directory Listing
Modified Tue May 12 18:49:44 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new icons for loadable modules wizard

Revision 9458  Directory Listing
Modified Mon May 11 23:10:36 2009 UTC (8 years, 4 months ago) by finetjul
Original Path: trunk
ENH: Fix the name of the "Resample Images" directory parameter. Suffix it with "directory".

Revision 9457  Directory Listing
Modified Mon May 11 21:59:24 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: add the colour tables to the list of data types that can be loaded

Revision 9456  Directory Listing
Modified Mon May 11 21:58:43 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
BUG: don't hide new colour table from editors. This change makes it show up in the Save Data widget

Revision 9455  Directory Listing
Modified Mon May 11 21:03:52 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: window/level presets for CT and PET volumes

Revision 9454  Directory Listing
Modified Mon May 11 20:22:50 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed redefinition of image_www

Revision 9452  Directory Listing
Modified Mon May 11 19:35:39 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new image data for loadable modules

Revision 9450  Directory Listing
Modified Mon May 11 19:33:44 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added new resources for loadable modules

Revision 9447  Directory Listing
Modified Mon May 11 17:41:49 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: look for the maximum dot product direction for realinging orientation rather than expecting it always to be greater than 45 degrees

Revision 9445  Directory Listing
Modified Mon May 11 12:12:25 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
ENH: fixes from Attila Nagy for solaris 32 and 64 bit

Revision 9443  Directory Listing
Modified Sat May 9 14:44:42 2009 UTC (8 years, 4 months ago) by vrnova
Original Path: trunk
BUG: fixed typo on performance tab
ENH: roll back CPU ray casting highest quality parameter to ver. 3.2.

Revision 9442  Directory Listing
Modified Sat May 9 14:42:25 2009 UTC (8 years, 4 months ago) by alexy
Original Path: trunk
BUG-FIXED: clear undo/redo stack after creating everything

Revision 9440  Directory Listing
Modified Fri May 8 21:45:33 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
ENH better name

Revision 9439  Directory Listing
Modified Fri May 8 19:48:35 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
ENH use foundation icon if available

Revision 9438  Directory Listing
Modified Fri May 8 19:29:48 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
BUG the uninstall action does not need to check if the repository is valid

Revision 9437  Directory Listing
Modified Fri May 8 19:29:24 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
BUG make sure to use the proper default if the cache dir is empty

Revision 9436  Directory Listing
Modified Fri May 8 19:28:49 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
ENH hookup show modules wizard to the refresh button

Revision 9434  Directory Listing
Modified Fri May 8 19:05:32 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
BUG: avoid crashes if the data gui hasn't been built yet

Revision 9433  Directory Listing
Modified Fri May 8 18:48:26 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
ENH select a directory

Revision 9432  Directory Listing
Modified Fri May 8 18:35:25 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
ENH remove extra /

Revision 9431  Directory Listing
Modified Fri May 8 18:34:59 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
ENH needs to be bigger

Revision 9430  Directory Listing
Modified Fri May 8 18:03:45 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
ENH use a scrollbar

Revision 9429  Directory Listing
Modified Fri May 8 17:07:05 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
BUG: deal with multiple values in the window and level strings

Revision 9428  Directory Listing
Modified Fri May 8 16:39:00 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: use the Window Center and Window Width fields if present in dicom headers to set the winlevel on the display node

Revision 9426  Directory Listing
Modified Thu May 7 21:42:43 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
BUG: avoid a crash when the Models module uses this to load a model. TODO: put in error checking for all cases

Revision 9425  Directory Listing
Modified Thu May 7 21:05:11 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
COMP: revert change that would disable visual studio builds of python with current compiler

Revision 9423  Directory Listing
Modified Thu May 7 20:06:24 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
BUG: /Upgrade doesn't work with Visual Studio 9 2008 (free version)

Revision 9422  Directory Listing
Modified Thu May 7 17:56:25 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
ENH: make the vtkOpenGLScriptedActor example work to render actual opengl

Revision 9421  Directory Listing
Modified Thu May 7 17:32:46 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
ENH: continued development.

Revision 9420  Directory Listing
Modified Thu May 7 13:27:05 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix typo that prevented freeing of checkpoint volumes.  Also add variable so it's easier to change the number of checkpoints -- eventually there should be a GUI for changing this

Revision 9419  Directory Listing
Modified Thu May 7 02:09:01 2009 UTC (8 years, 4 months ago) by sylvain
Original Path: trunk
ENH: add module to perform Bias Field Correction for MRI images following the method Non-parametric Non-uniform Intensity Normalization (N3) described by Sled et al in IEEE TMI 1998.

Revision 9417  Directory Listing
Modified Wed May 6 21:55:14 2009 UTC (8 years, 4 months ago) by sylvain
Original Path: trunk
ENH: add module for bias field correction in MRI images. It estimates the spatial inhomogeneity of intensities due to MRI coil distorsion and applies a function to the image intensity to compensate this inhomogeneity field. This module is based on the method described in the paper of Styner et al. IEEE TMI 2000.

Revision 9416  Directory Listing
Modified Wed May 6 21:18:46 2009 UTC (8 years, 4 months ago) by sylvain
Original Path: trunk
ENH: adding a module to normalize the intensity of images. It is designed as a pre-processing step required for the Expectation-Maximization (EM) algorithm. The algorithm works as follows. First it computes the histogram of the input image, second it locates the mean value of the histogram, and finally it applies a normalization factor on the entire image. The parameters are the percentage of the pixel intensities to take into account and the regularization factor applied to the histogram. The rationale for not selecting the entire spectrum of pixel intensities is to remove the outliers in the image histogram. The regularization of the histogram is performed by an iterative averaging of the histogram bins. The significance of the regularization factor is a number of regularization steps. A regularization factor will smooth out the local minima in the histogram allowing for a better localization of the mean intensity at the cost of a larger processing time.

Revision 9414  Directory Listing
Modified Wed May 6 19:43:09 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
BUG: ROI sampling increment could be 0, causing indefinite loop

Revision 9413  Directory Listing
Modified Wed May 6 19:16:57 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 9412  Directory Listing
Modified Wed May 6 19:16:46 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 9411  Directory Listing
Modified Wed May 6 18:50:58 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
BUG: ROI widget resolution is now adjusted based on the image
dimensions

Revision 9410  Directory Listing
Modified Wed May 6 18:48:35 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: added SetResolution()

Revision 9409  Directory Listing
Modified Wed May 6 15:31:28 2009 UTC (8 years, 4 months ago) by vrnova
Original Path: trunk
BUG: fixed vtkOpenGLExtensionManager leak in GPU ray casting mapper

Revision 9408  Directory Listing
Modified Tue May 5 17:00:20 2009 UTC (8 years, 4 months ago) by finetjul
Original Path: trunk
ENH: Add the BatchMake INCLUDE dirs and LINK dirs when including Slicer3_USE_FILE in external projects

Revision 9407  Directory Listing
Modified Tue May 5 14:15:26 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix some I/O issues and node selector setup

Revision 9405  Directory Listing
Modified Mon May 4 21:17:18 2009 UTC (8 years, 4 months ago) by finetjul
Original Path: trunk
ENH: Export BatchMake_DIR in Slicer3Config.cmake so that BatchMake is included in Find_Package( Slicer3 )

Revision 9404  Directory Listing
Modified Mon May 4 21:15:13 2009 UTC (8 years, 4 months ago) by finetjul
Original Path: trunk
ENH: RegisterImagesBatchMake module now iterates over the number of Rigid, Affine and BSpline iterations

Revision 9402  Directory Listing
Modified Mon May 4 19:53:02 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
ENH: added module IGTPlanning.

Revision 9401  Directory Listing
Modified Mon May 4 16:59:22 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
BUG: disabled IGTNavigation module for development.

Revision 9400  Directory Listing
Modified Mon May 4 16:53:12 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
STYLE: cleaned up code.

Revision 9398  Directory Listing
Modified Sun May 3 16:26:05 2009 UTC (8 years, 4 months ago) by alexy
Original Path: trunk
ENH: removed EndoNavTracking

Revision 9397  Directory Listing
Modified Sun May 3 16:24:35 2009 UTC (8 years, 4 months ago) by alexy
Original Path: trunk
BUG-FIXED: create missing filenames in snapshot's storage nodes

Revision 9396  Directory Listing
Modified Sun May 3 16:00:20 2009 UTC (8 years, 4 months ago) by alexy
Original Path: trunk
BUG-FIXED: put back the polyline creation deleted in the previous check-in

Revision 9395  Directory Listing
Modified Sat May 2 13:45:47 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: revised image data

Revision 9393  Directory Listing
Modified Sat May 2 13:22:20 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: setting master window on load scene dialog; i think i forgot to check this in earlier

Revision 9392  Directory Listing
Modified Sat May 2 13:20:15 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: modifications to fid icons after feedback from nicole

Revision 9390  Directory Listing
Modified Fri May 1 21:19:41 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: commiting changes to sync with 3-4 branch fixes

Revision 9388  Directory Listing
Modified Fri May 1 20:54:42 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
BUG: cleaned up.

Revision 9387  Directory Listing
Modified Fri May 1 20:40:42 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
ENH: added a new module - IGTNavigation.

Revision 9385  Directory Listing
Modified Fri May 1 19:28:37 2009 UTC (8 years, 4 months ago) by alexy
Original Path: trunk
BUG-FIXED: 560. Fixed mrml and widget events propagation for all kinds of volume display widgets and threshold/window level widget's histogram. Made it work with tear down and recreation of widgets.

Revision 9384  Directory Listing
Modified Fri May 1 18:42:11 2009 UTC (8 years, 4 months ago) by hayes
Original Path: trunk
ENH: Moved version number to 3.5

Revision 9381  Directory Listing
Modified Fri May 1 16:01:24 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: resources and icons for fiducials gui rework

Revision 9380  Directory Listing
Modified Fri May 1 15:58:05 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding new image data for fiducial gui rework

Revision 9379  Directory Listing
Modified Fri May 1 15:33:32 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
COMP: remove debug print and fix version in filename

Revision 9377  Directory Listing
Modified Fri May 1 03:14:25 2009 UTC (8 years, 4 months ago) by tokuda
Original Path: trunk
ENH: clarify precedence at line 169.

Revision 9376  Directory Listing
Modified Thu Apr 30 21:24:27 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
BUG: fixed a start crash.

Revision 9372  Directory Listing
Modified Thu Apr 30 19:27:57 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
BUG: porting bug fix 572 from 3.4 branch

Revision 9371  Directory Listing
Modified Thu Apr 30 18:58:56 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
ENH: test of a new facility to write vtk actors with scripts (initially python using PyOpenGL and eventually teem)

Revision 9368  Directory Listing
Modified Thu Apr 30 17:22:32 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix compile warnings

Revision 9364  Directory Listing
Modified Thu Apr 30 14:26:44 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
STYLE: remove debugging statements

Revision 9363  Directory Listing
Modified Thu Apr 30 12:25:21 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix cmake file for machines that don't have cuda sdk installed

Revision 9362  Directory Listing
Modified Thu Apr 30 05:32:11 2009 UTC (8 years, 4 months ago) by nicky
Original Path: trunk
ENH:better support in finding CUDA on compile level.

Revision 9361  Directory Listing
Modified Thu Apr 30 05:20:38 2009 UTC (8 years, 4 months ago) by nicky
Original Path: trunk
ENH:Let CUDA_SUPPORT_ENABLED flag be set to ON automatically if CUDA is 
found in the system. 

Revision 9360  Directory Listing
Modified Thu Apr 30 00:41:42 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: modified RegistrationTest02 to compare the result with a "ground truth"
transform (transform obtained by running registration in GUI mode with the
same set of parameters)

Revision 9359  Directory Listing
Modified Thu Apr 30 00:15:35 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: added ground truth testing transform for registering MRMeningioma1.nrrd
(moving) with MRMeningioma0.nrrd. This transform was obtained with the
following parameters using r9358, on george.bwh.harvard.edu, gcc 4.1.2, debug
mode.

 ./Slicer3 --launch RigidRegistration --fixedsmoothingfactor 0
 --movingsmoothingfactor 0 --histogrambins 30 --spatialsamples 10000
 --iterations 100,100,50,20 --learningrate 0.01,0.005,0.0005,0.0002
 --translationscale 100 --initialtransform
 ../Slicer3/Testing/Data/Input/MRMeningioma01.tfm --outputtransform
 ./transform.txt --resampledmovingfilename ./registered.nrrd
 ../Slicer3/Testing/Data/Input/MRMeningioma0.nrrd
 ../Slicer3/Testing/Data/Input/MRMeningioma1.nrrd


Revision 9358  Directory Listing
Modified Thu Apr 30 00:11:51 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: added testing mode for RigidRegistration module

Revision 9357  Directory Listing
Modified Wed Apr 29 20:59:51 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
COMP: merge warning fixes from 3.4 release branch to trunk

Revision 9350  Directory Listing
Modified Tue Apr 28 20:52:45 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
STYLE: fixed grammar in dialogue box

Revision 9348  Directory Listing
Modified Tue Apr 28 19:48:02 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
BUG: completely fixed memory leaking.

Revision 9347  Directory Listing
Modified Tue Apr 28 19:47:46 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
BUG: completely fixed memory leaking.

Revision 9346  Directory Listing
Modified Tue Apr 28 18:28:09 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: expose the numbering scheme for the next added fiducial in the list

Revision 9345  Directory Listing
Modified Tue Apr 28 18:26:41 2009 UTC (8 years, 4 months ago) by naucoin
Original Path: trunk
ENH: add some utility methods to get/set the numbering scheme as a string. Cleaned up print out

Revision 9343  Directory Listing
Modified Tue Apr 28 15:07:59 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix order of variable resolution and use

Revision 9340  Directory Listing
Modified Tue Apr 28 13:44:19 2009 UTC (8 years, 4 months ago) by jvs
Original Path: trunk
ENH: code cleaning

Revision 9338  Directory Listing
Modified Tue Apr 28 12:42:43 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
ENH: update version number for title bar

Revision 9336  Directory Listing
Modified Mon Apr 27 21:00:43 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
STYLE: avoid compiler warning about unused variable

Revision 9335  Directory Listing
Modified Mon Apr 27 20:57:11 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix compile warnings

Revision 9334  Directory Listing
Modified Mon Apr 27 20:53:27 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
STYLE: fix warning message

Revision 9333  Directory Listing
Modified Mon Apr 27 20:52:26 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
STYLE: delete some prints and dead code comments

Revision 9332  Directory Listing
Modified Mon Apr 27 20:06:47 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
ENH: enabled parsing of "hidden" attribute for boolean type in CLI

Revision 9331  Directory Listing
Modified Mon Apr 27 19:39:20 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix final leaks

Revision 9330  Directory Listing
Modified Mon Apr 27 19:14:12 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix leaks

Revision 9329  Directory Listing
Modified Mon Apr 27 19:07:17 2009 UTC (8 years, 4 months ago) by vrnova
Original Path: trunk
ENH: cleaning up, looser hardware checking condition for GPU ray casting

Revision 9328  Directory Listing
Modified Mon Apr 27 18:58:23 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix error in reference counts for MRML scene

Revision 9327  Directory Listing
Modified Mon Apr 27 15:32:08 2009 UTC (8 years, 4 months ago) by vrnova
Original Path: trunk
ENH: same software ray casting behavior with older version

Revision 9326  Directory Listing
Modified Mon Apr 27 15:13:51 2009 UTC (8 years, 4 months ago) by fedorov
Original Path: trunk
BUG: interation parameter setup bogus

Revision 9324  Directory Listing
Modified Mon Apr 27 14:37:08 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix leaks in ProstateNav.  Still a crash on exit that needs to be fixed

Revision 9323  Directory Listing
Modified Fri Apr 24 19:14:32 2009 UTC (8 years, 4 months ago) by vrnova
Original Path: trunk
ENH: Modifying mapper behaviors. Confusing "Force High Quality" check button removed. More works on going...

Revision 9322  Directory Listing
Modified Fri Apr 24 18:33:32 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: avoid accessing uninitialized variables

Revision 9320  Directory Listing
Modified Fri Apr 24 17:33:07 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: avoid accessing unset variable

Revision 9319  Directory Listing
Modified Fri Apr 24 17:13:50 2009 UTC (8 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: re-enabling backface culling

Revision 9317  Directory Listing
Modified Fri Apr 24 17:11:47 2009 UTC (8 years, 4 months ago) by vrnova
Original Path: trunk
ENH: Adjustment on perfomance/quality algorithm

Revision 9316  Directory Listing
Modified Fri Apr 24 16:16:20 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
COMP: merge patches from Attila Nagy that support 32 and 64 bit builds on solaris

Revision 9315  Directory Listing
Modified Fri Apr 24 16:10:42 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
COMP: create the slicer version file when running getbuildtest, rather than doing it as part of the extend process

Revision 9314  Directory Listing
Modified Fri Apr 24 15:50:41 2009 UTC (8 years, 4 months ago) by yumin
Original Path: trunk
BUG: #564 ... problem with menubutton text resizing and appearance in node selector widgets. Added CreateWidget() in vtkSlicerNodeSelectorWidget, and moved SetAdjustLabelWidthToWidgetSize(1) to CreateWidget() so that this widget will automatically update its text when resized.

Revision 9313  Directory Listing
Modified Fri Apr 24 15:30:23 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
STYLE: use an autogenerated temp name rather than passing in a name

Revision 9312  Directory Listing
Modified Fri Apr 24 15:29:31 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix leaking widget reference

Revision 9311  Directory Listing
Modified Fri Apr 24 15:27:05 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
ENH: expose the imported module for access inside module if needed

Revision 9310  Directory Listing
Modified Fri Apr 24 15:26:24 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
STYLE: fix indent issue

Revision 9309  Directory Listing
Modified Fri Apr 24 15:25:59 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
STYLE: make the dialog bigger so full text is shown

Revision 9307  Directory Listing
Modified Fri Apr 24 12:32:59 2009 UTC (8 years, 4 months ago) by tgl
Original Path: trunk
BUG don't try to get a substring if the original string is empty

Revision 9306  Directory Listing
Modified Fri Apr 24 04:33:03 2009 UTC (8 years, 4 months ago) by jvs
Original Path: trunk
ENH: minor fixes

Revision 9304  Directory Listing
Modified Thu Apr 23 23:08:02 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix out of date license files

Revision 9299  Directory Listing
Modified Thu Apr 23 18:32:12 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: rearrange logic to work with CMake 2.6.0

Revision 9298  Directory Listing
Modified Thu Apr 23 18:20:29 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
ENH: re-enabled ProstateNav module.

Revision 9295  Directory Listing
Modified Thu Apr 23 17:26:57 2009 UTC (8 years, 4 months ago) by hliu
Original Path: trunk
BUG: fixed a bug causing Slicer crash.

Revision 9292  Directory Listing
Modified Thu Apr 23 17:04:45 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
BUG: put module into correct category in menu

Revision 9290  Directory Listing
Modified Thu Apr 23 16:51:57 2009 UTC (8 years, 4 months ago) by alexy
Original Path: trunk
ENH: read absolute path in Storage and Snapshots nodes and write relative path

Revision 9288  Directory Listing
Modified Thu Apr 23 15:34:44 2009 UTC (8 years, 4 months ago) by taox
Original Path: trunk
BUG: used different element sizes for morphology operation, which can potentially create holds in areas around high surface curvature.

Revision 9287  Directory Listing
Modified Thu Apr 23 02:16:51 2009 UTC (8 years, 4 months ago) by millerjv
Original Path: trunk
BUG: need to support multiple slice controllers controlling a single slice node.  This requires changing the tests when searching for the SliceGUI for a SliceController to not check whether the current SliceController is the controller created by the SliceGUI but rather that the SliceController and SliceGUI are controlling the same SliceNode

Revision 9286  Directory Listing
Modified Wed Apr 22 23:08:07 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
COMP: bump the version number for the experimental builds

Revision 9285  Directory Listing
Modified Wed Apr 22 23:06:30 2009 UTC (8 years, 4 months ago) by pieper
Original Path: trunk
ENH: re-enable expermental module for tractography exploration

Revision 9279  Directory Listing
Modified Wed Apr 22 20:53:28 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix leaks and compile warnings

Revision 9278  Directory Listing
Modified Wed Apr 22 20:35:28 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: only include RegisterImages if we have a 3.12 build, when optimized registration will be part of ITK proper, or when using an earlier version that was built with the proper experimental code enabled

Revision 9277  Directory Listing
Modified Wed Apr 22 20:27:22 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: include _ctypes module on windows to work with teem.py

Revision 9276  Directory Listing
Modified Wed Apr 22 19:00:09 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
ENH: add teem python bindings

Revision 9275  Directory Listing
Modified Wed Apr 22 16:25:05 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: fix logic for deciding if RegisterImages can be included in the build

Revision 9273  Directory Listing
Modified Tue Apr 21 21:50:25 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: utilities and utilities button frame parents incorrectly set, added missing help text

Revision 9272  Directory Listing
Modified Tue Apr 21 21:28:52 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
ENH: adding summed total of distance between all fiducial points

Revision 9271  Directory Listing
Modified Tue Apr 21 19:36:23 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
ENH: move the renaming and renumbering methods onto the fiducial list node, make a dialogue in the GUI to grab a number to start the renumbering from. Added setting the label text from the id, with optional numberingschmes. TODO: expose those in the GUI

Revision 9270  Directory Listing
Modified Tue Apr 21 17:29:50 2009 UTC (8 years, 5 months ago) by taox
Original Path: trunk
ENH: compute and write out window/level for proper display.

Revision 9269  Directory Listing
Modified Tue Apr 21 16:30:07 2009 UTC (8 years, 5 months ago) by taox
Original Path: trunk
ENH: added test for new module PolyDataToLabelmap. Test data and baseline result were checked in.

Revision 9268  Directory Listing
Modified Tue Apr 21 16:28:27 2009 UTC (8 years, 5 months ago) by taox
Original Path: trunk
ENH: added new module PolyDataToLabelmap, which convert a closed surface model (in vtk xml format) into a label map.

Revision 9267  Directory Listing
Modified Tue Apr 21 15:49:18 2009 UTC (8 years, 5 months ago) by taox
Original Path: trunk
ENH: baseline results for module PolyDataToLabelmap. 

Revision 9266  Directory Listing
Modified Tue Apr 21 15:38:50 2009 UTC (8 years, 5 months ago) by taox
Original Path: trunk
ENH: test dataset for module PolyDataToLabelmap. original dataset from OASIS database. 

Revision 9265  Directory Listing
Modified Tue Apr 21 13:59:24 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: leak fix

Revision 9263  Directory Listing
Modified Mon Apr 20 13:54:41 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk
BUG: fixed image reformatting orientation for neuro navigation.

Revision 9262  Directory Listing
Modified Mon Apr 20 13:47:55 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
COMP: remove scope warnings

Revision 9261  Directory Listing
Modified Mon Apr 20 01:25:26 2009 UTC (8 years, 5 months ago) by nicky
Original Path: trunk
BUG: fixing a typo regarding CUDA ray cast in Cropping. 

Revision 9259  Directory Listing
Modified Fri Apr 17 22:19:53 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
ENH: simple interface to renumber and rename fiducials in a list

Revision 9258  Directory Listing
Modified Fri Apr 17 18:08:13 2009 UTC (8 years, 5 months ago) by barre
Original Path: trunk
ENH: you may want to try with CUDA_SUPPORT_ENABLED to OFF...

Revision 9257  Directory Listing
Modified Fri Apr 17 13:20:38 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: server loading bug

Revision 9256  Directory Listing
Modified Fri Apr 17 13:11:12 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: server loading bug

Revision 9255  Directory Listing
Modified Fri Apr 17 13:02:24 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: server loading bug

Revision 9254  Directory Listing
Modified Fri Apr 17 12:32:36 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: check for cuda option before including the subdirectory

Revision 9253  Directory Listing
Modified Fri Apr 17 09:18:56 2009 UTC (8 years, 5 months ago) by nicky
Original Path: trunk
ENH:uncomment CudaSupport

Revision 9252  Directory Listing
Modified Fri Apr 17 09:06:19 2009 UTC (8 years, 5 months ago) by nicky
Original Path: trunk
ENH: add CUDA ray casting for volume rendering.

Revision 9251  Directory Listing
Modified Fri Apr 17 00:22:19 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: wait for task to complete before exiting - this tests the task and also avoids leaking the command line module node

Revision 9250  Directory Listing
Modified Fri Apr 17 00:18:41 2009 UTC (8 years, 5 months ago) by barre
Original Path: trunk
ENH: fix bug 287 / 523

Revision 9249  Directory Listing
Modified Thu Apr 16 22:29:54 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix leak

Revision 9248  Directory Listing
Modified Thu Apr 16 20:34:53 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid memory leak for tensor volumes

Revision 9246  Directory Listing
Modified Thu Apr 16 19:35:22 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix leak by deleting scene before dispoing of EventBroker singleton

Revision 9245  Directory Listing
Modified Thu Apr 16 18:30:54 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: don't call delete on the smart pointer

Revision 9243  Directory Listing
Modified Thu Apr 16 17:51:00 2009 UTC (8 years, 5 months ago) by hayes
Original Path: trunk
BUG: Changed logical AND to OR

Revision 9236  Directory Listing
Modified Thu Apr 16 13:01:56 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix incorrect help strings

Revision 9235  Directory Listing
Modified Thu Apr 16 12:07:27 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: status to user to use other interface for dicom loading

Revision 9233  Directory Listing
Modified Wed Apr 15 22:34:11 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid crash on exit by being careful with observers

Revision 9232  Directory Listing
Modified Wed Apr 15 22:23:46 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: more leak fixes and also remove creation of local vtkSlicerTheme instance

Revision 9231  Directory Listing
Modified Wed Apr 15 22:18:19 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: leak fixes

Revision 9230  Directory Listing
Modified Wed Apr 15 22:07:43 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: check for empty directory and return instead of crashing

Revision 9229  Directory Listing
Modified Wed Apr 15 22:00:38 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix leaks

Revision 9228  Directory Listing
Modified Wed Apr 15 21:59:47 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: leaks and indents

Revision 9227  Directory Listing
Modified Wed Apr 15 21:46:11 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: leak fix

Revision 9226  Directory Listing
Modified Wed Apr 15 21:43:45 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: leak fix

Revision 9225  Directory Listing
Modified Wed Apr 15 21:43:00 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: don't delete the render widget from outside - this is done in the MimxMainWindow

Revision 9224  Directory Listing
Modified Wed Apr 15 21:40:12 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: leak fixing

Revision 9223  Directory Listing
Modified Wed Apr 15 21:37:00 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: make instance variables to avoid leaks

Revision 9222  Directory Listing
Modified Wed Apr 15 21:35:26 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
STYLE: indentation fixes

Revision 9221  Directory Listing
Modified Wed Apr 15 21:06:46 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix leaks

Revision 9220  Directory Listing
Modified Wed Apr 15 20:09:16 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix leaks and rework structure to more conventional MRML instance variable allocation

Revision 9219  Directory Listing
Modified Wed Apr 15 20:02:34 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix leaks and rework structure to more conventional MRML instance variable allocation

Revision 9218  Directory Listing
Modified Wed Apr 15 19:48:48 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix missing call to Delete

Revision 9217  Directory Listing
Modified Wed Apr 15 19:41:58 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: remove dupicate delete of filters in MRML nodes and add methods to break reference cycles to allow destructors to be called and fix some of the leaks

Revision 9216  Directory Listing
Modified Wed Apr 15 19:11:28 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
COMP: use an unused var

Revision 9215  Directory Listing
Modified Wed Apr 15 18:39:19 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: fix info string, null pointer checking

Revision 9214  Directory Listing
Modified Wed Apr 15 18:26:31 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix importer to handle dicom file lists from slicer2 xml

Revision 9213  Directory Listing
Modified Wed Apr 15 18:24:09 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix leak

Revision 9212  Directory Listing
Modified Wed Apr 15 18:12:08 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: take out the clunky loading and use the new data module pop ups. TODO: try to reposition the pop ups for this GUI

Revision 9211  Directory Listing
Modified Wed Apr 15 18:10:10 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: updating info strings

Revision 9210  Directory Listing
Modified Wed Apr 15 18:09:00 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
COMP: models gui header not needed

Revision 9209  Directory Listing
Modified Wed Apr 15 15:43:57 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: getting rid of a null node complaint

Revision 9208  Directory Listing
Modified Wed Apr 15 13:27:26 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: remove assumption that MRMLScene pointer will be non-NULL when using the storage node for file loading

Revision 9207  Directory Listing
Modified Wed Apr 15 12:44:00 2009 UTC (8 years, 5 months ago) by millerjv
Original Path: trunk
ENH: put volume names on Slice views

Revision 9206  Directory Listing
Modified Wed Apr 15 10:29:13 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: null pointer checking on loadable module setup

Revision 9205  Directory Listing
Modified Wed Apr 15 10:28:06 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: turning observers on mrml/gui on when entered and off when exited. workaround, not a definitive fix

Revision 9204  Directory Listing
Modified Wed Apr 15 06:01:22 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: code cleaning

Revision 9203  Directory Listing
Modified Tue Apr 14 22:45:09 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: make the list box expand (frame it was in needed settings changed), add select all and none buttons

Revision 9202  Directory Listing
Modified Tue Apr 14 22:17:57 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: fixed crash in CLI on checking relative file path, changed ImageLabelCombine

Revision 9201  Directory Listing
Modified Tue Apr 14 19:58:14 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk
ENH: increased the range of the translation scale from (-20, 20) to (-80, 80) for DTI fiducial seeding.

Revision 9200  Directory Listing
Modified Tue Apr 14 19:50:41 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: make sure compare the input file as a relative path to relative paths in the storage node, as otherwise can get duplicates

Revision 9199  Directory Listing
Modified Tue Apr 14 19:38:05 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: reorganize tear down sequence

Revision 9198  Directory Listing
Modified Tue Apr 14 19:36:41 2009 UTC (8 years, 5 months ago) by hayes
Original Path: trunk
BUG: Changed logical OR to AND

Revision 9197  Directory Listing
Modified Tue Apr 14 18:50:32 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: include the archetype in the file list as if it's passed to the reader, it needs it

Revision 9196  Directory Listing
Modified Tue Apr 14 18:24:17 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: fixed typos

Revision 9195  Directory Listing
Modified Tue Apr 14 18:16:24 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: rearrange the display options a bit, and add in the missing widgets for setting ambient, diffuse, specular, power

Revision 9194  Directory Listing
Modified Tue Apr 14 18:14:55 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: setting ambient, diffuse, specular, power needs to throw a display modified event. Added in range checking there and in set opacity as well

Revision 9193  Directory Listing
Modified Tue Apr 14 17:25:56 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: trying to fix toplevel focus problem. Added additional classes to theme; set ModalOn() on individual popups in appGUI, and set the MasterWindow wherever it wasn't set.

Revision 9192  Directory Listing
Modified Tue Apr 14 16:14:20 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing list expose/hide behavior in display panel. changed some balloon help to clarify current functionality. changed calls on node to prevent extra modified events from being triggered. discussed with nicole future modifications.

Revision 9191  Directory Listing
Modified Tue Apr 14 16:07:29 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: disable ProstateNav until leak and crash issues sorted out

Revision 9190  Directory Listing
Modified Tue Apr 14 15:54:56 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: free scene reference

Revision 9189  Directory Listing
Modified Tue Apr 14 15:54:25 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: don't try to set home module when in test mode

Revision 9188  Directory Listing
Modified Tue Apr 14 15:53:39 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: match new with delete type for array

Revision 9187  Directory Listing
Modified Tue Apr 14 15:22:27 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: re-enable freeing the steps array, but still don't call WizardWidget's Delete

Revision 9186  Directory Listing
Modified Tue Apr 14 15:18:56 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: don't delete the wizard dialog, even though it leaks.  With Delete there is an unexplained crash

Revision 9185  Directory Listing
Modified Tue Apr 14 15:08:17 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: remove edit icons that are yet implemented

Revision 9184  Directory Listing
Modified Tue Apr 14 13:45:52 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: extra delete code to clean up leaks

Revision 9183  Directory Listing
Modified Tue Apr 14 13:33:23 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix leaks by allowing module GUI to destruct

Revision 9182  Directory Listing
Modified Tue Apr 14 03:07:36 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: automatic server handling under posix os

Revision 9181  Directory Listing
Modified Tue Apr 14 00:15:32 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: took out applying the transform, changed module name to ACPC Transform, updated docs

Revision 9180  Directory Listing
Modified Mon Apr 13 23:27:55 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: request a render locally and pass it through to the viewer widget on idle rather than calling direct to the viewer widget. Some efficiencies implemented, don't need to reset the glyph actor's colour table

Revision 9179  Directory Listing
Modified Mon Apr 13 22:27:19 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: was losing the fiducial point ids when copying them in the move up/down the list, losing the linking with the point widgets

Revision 9178  Directory Listing
Modified Mon Apr 13 20:47:26 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk
ENH: added support to move fiducial for DTI seeding.

Revision 9177  Directory Listing
Modified Mon Apr 13 20:38:10 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing the crash with lazybuild

Revision 9176  Directory Listing
Modified Mon Apr 13 20:32:21 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid crash from tearing down unbuilt GUI and rearrange node creation code in attempt to avoid leak

Revision 9175  Directory Listing
Modified Mon Apr 13 20:22:26 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: made ron's content changes in customizing slicer panel

Revision 9174  Directory Listing
Modified Mon Apr 13 19:35:23 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: adapted FetchMI to build lazily, to only use gui observers when module is raised. made some gui modifications as per ron's suggestions

Revision 9173  Directory Listing
Modified Mon Apr 13 19:33:56 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: added mechanism for loadable modules to build lazily

Revision 9172  Directory Listing
Modified Mon Apr 13 19:33:33 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid double allocation of welcome icons

Revision 9171  Directory Listing
Modified Mon Apr 13 19:19:42 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: add new modules to the testing list

Revision 9170  Directory Listing
Modified Mon Apr 13 19:08:00 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid crash when starting in --no-modules mode

Revision 9169  Directory Listing
Modified Mon Apr 13 18:44:32 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: make python in distribution package be executable (to work for stochastic tractography

Revision 9168  Directory Listing
Modified Mon Apr 13 18:08:57 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix bug 453: show the scalar operation value rather than the tensor value at each pixel on mouse over .  Also show operation abbreviation

Revision 9167  Directory Listing
Modified Mon Apr 13 15:13:48 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: partial fix for bug 453 to display scalar invariant rather than full tensor per pixel in annotation

Revision 9166  Directory Listing
Modified Mon Apr 13 13:29:36 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: minor bugfix

Revision 9165  Directory Listing
Modified Mon Apr 13 06:15:31 2009 UTC (8 years, 5 months ago) by nicky
Original Path: trunk
ENH: update FindCuda.cmake to support various systems better

Revision 9164  Directory Listing
Modified Sun Apr 12 22:03:02 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: tesnsor optimization

Revision 9163  Directory Listing
Modified Sun Apr 12 20:59:41 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: code cleaning

Revision 9162  Directory Listing
Modified Sat Apr 11 22:08:47 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: revert change that was committed by mistake

Revision 9161  Directory Listing
Modified Sat Apr 11 18:43:23 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: adapt to measurment frame change in slicer

Revision 9160  Directory Listing
Modified Sat Apr 11 16:58:58 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: 519 prevent scalar volume reader from reading non-scalar volumes.

Revision 9159  Directory Listing
Modified Fri Apr 10 22:00:14 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk
ENH: 3d view refocus on ROI updates in slice viewers

Revision 9158  Directory Listing
Modified Fri Apr 10 21:52:54 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: don't pass down the list of extra files when the file type is a multi-part format (like .hdr/img) to avoid having ITK think these form part of a series like a 4D volume

Revision 9157  Directory Listing
Modified Fri Apr 10 21:21:00 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added SlicerWelcome module at startup options in app registry.

Revision 9156  Directory Listing
Modified Fri Apr 10 21:17:42 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: adjusted directory column in save widget to be wide enough to accommodate whatever the longest dirname is. accounted also for mrml scene row

Revision 9155  Directory Listing
Modified Fri Apr 10 21:09:43 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: made sure all dialogs come up modal

Revision 9154  Directory Listing
Modified Fri Apr 10 21:08:51 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed packing

Revision 9153  Directory Listing
Modified Fri Apr 10 21:05:37 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Added Module add/remove tab, updated content, added option to show or not show welcome on startup

Revision 9152  Directory Listing
Modified Fri Apr 10 21:04:19 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new image data for Welcome module

Revision 9151  Directory Listing
Modified Fri Apr 10 20:30:24 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk
BUG: added image cast to subtract routine

Revision 9150  Directory Listing
Modified Fri Apr 10 20:11:49 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: revert incorrect code

Revision 9149  Directory Listing
Modified Fri Apr 10 20:06:54 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: add progress, remove dead code, fix leaks

Revision 9148  Directory Listing
Modified Fri Apr 10 20:04:29 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix remove islands effect

Revision 9147  Directory Listing
Modified Fri Apr 10 18:55:41 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: remove unused var

Revision 9146  Directory Listing
Modified Fri Apr 10 18:41:26 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid printing full tensor value on mouseover

Revision 9145  Directory Listing
Modified Fri Apr 10 18:27:24 2009 UTC (8 years, 5 months ago) by millerjv
Original Path: trunk
BUG: Commenting out more of the code that we are not using to fix a crash.

Revision 9144  Directory Listing
Modified Fri Apr 10 18:10:05 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: removing compiler warnings, RunCondor and ParseBuffer are void methods

Revision 9143  Directory Listing
Modified Fri Apr 10 18:09:53 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: allow Add Volume dialog to be maximized

Revision 9142  Directory Listing
Modified Fri Apr 10 18:05:37 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: deal with empty fiducial labels

Revision 9141  Directory Listing
Modified Fri Apr 10 18:03:08 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: updated link to 3.4 documentation

Revision 9140  Directory Listing
Modified Fri Apr 10 18:02:06 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: after deleting the node, set it to null

Revision 9139  Directory Listing
Modified Fri Apr 10 17:56:41 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: need to calculate relative paths for all file names in a storage node

Revision 9138  Directory Listing
Modified Fri Apr 10 17:40:49 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: uninitialized instance variable caused incorrect scene load behavior

Revision 9137  Directory Listing
Modified Fri Apr 10 17:37:44 2009 UTC (8 years, 5 months ago) by millerjv
Original Path: trunk
BUG: #448 and perhaps #440. Mac OS X defaults to RTLD_GLOBAL when using dlopen.  This causes all functions and variables within plugins to be accessible to main program as well as other plugins without having to use dlsym.  Many of the Slicer plugins have functions with the same name, e.g. DoIt().  If loaded with RTLD_GLOBAL, the wrong DoIt() method can be called.  There is no way to override this behavior through kwsys. So we hardcode the Mac OS X case to use dlopen directly instead of itksys::OpenLibrary().

Revision 9136  Directory Listing
Modified Fri Apr 10 17:33:12 2009 UTC (8 years, 5 months ago) by millerjv
Original Path: trunk
BUG: Attempt to fix bug #488 and perhaps #440 but forcing functions in plugins to have file scope.  Turns out not to be cause of the bug but since it is probably a good idea to have the code structured like this, I am checking it in.

Revision 9135  Directory Listing
Modified Fri Apr 10 16:16:04 2009 UTC (8 years, 5 months ago) by millerjv
Original Path: trunk
COMP: warnings

Revision 9134  Directory Listing
Modified Fri Apr 10 15:24:33 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
COMP: removing unused vars

Revision 9133  Directory Listing
Modified Fri Apr 10 15:20:53 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: need quotes around the home module in case it has a space in it's name -Model Maker was failing as a home module on start up

Revision 9132  Directory Listing
Modified Fri Apr 10 14:47:49 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
COMP: getting rid of compiler warnings, commenting out unused vars, doubles to int

Revision 9131  Directory Listing
Modified Fri Apr 10 14:33:58 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
COMP: commenting out unused vars

Revision 9130  Directory Listing
Modified Fri Apr 10 14:28:22 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: expand the column width so that can see the full precision display of the matrix values

Revision 9129  Directory Listing
Modified Fri Apr 10 13:21:40 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED 418  Update references for valid scene, clear for invalid.

Revision 9128  Directory Listing
Modified Fri Apr 10 13:09:50 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid freeing an already deleted image

Revision 9127  Directory Listing
Modified Fri Apr 10 04:50:15 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: bugfix connectivity

Revision 9126  Directory Listing
Modified Fri Apr 10 03:54:23 2009 UTC (8 years, 5 months ago) by tgl
Original Path: trunk
ENH parse extension server URL from Slicer3Version.txt

Revision 9125  Directory Listing
Modified Fri Apr 10 03:23:48 2009 UTC (8 years, 5 months ago) by tgl
Original Path: trunk
ENH add binary directory to store execution location

Revision 9124  Directory Listing
Modified Fri Apr 10 03:11:08 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: bugfix tensor input

Revision 9123  Directory Listing
Modified Thu Apr 9 20:32:05 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: don't need to mark the list as modified since read by default

Revision 9122  Directory Listing
Modified Thu Apr 9 18:22:32 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: move switch to home module before scripts and exec commands since they are meant to happen after the GUI has finished being created

Revision 9121  Directory Listing
Modified Thu Apr 9 17:51:05 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: don't show spin buttons if they don't work (bug 451)

Revision 9120  Directory Listing
Modified Thu Apr 9 17:35:54 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: don't allow non number entries in transform editor (bug 451)

Revision 9119  Directory Listing
Modified Thu Apr 9 17:23:09 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: allow scrolling through slices while a draw outline is pending.  Indicate that drawing is not possible on this slice by switching to dashed line mode

Revision 9118  Directory Listing
Modified Thu Apr 9 17:02:16 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: allow pan/zoom of slices with right mouse drag while draw outline is pending, then allow apply with right click

Revision 9117  Directory Listing
Modified Thu Apr 9 16:42:18 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid killing the current tool when toggling the label color and other non-modal actions

Revision 9116  Directory Listing
Modified Thu Apr 9 16:32:39 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: bugfix tensor input

Revision 9115  Directory Listing
Modified Thu Apr 9 16:21:45 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid creating visible cross sections (ModelSWidgets) that will be degenerate and cause a flashing line that move due to roundoff errors

Revision 9114  Directory Listing
Modified Thu Apr 9 16:00:26 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
STYLE: fix indents

Revision 9113  Directory Listing
Modified Thu Apr 9 15:59:52 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
STYLE: more verbose variable name for readability

Revision 9112  Directory Listing
Modified Thu Apr 9 15:14:40 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: bugfix tensor input

Revision 9111  Directory Listing
Modified Thu Apr 9 12:35:48 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: extra debugging options for the mrml scene

Revision 9110  Directory Listing
Modified Wed Apr 8 22:42:32 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: add command line arguments to file executed from command line and turn off some debug statements and avoid one leak

Revision 9109  Directory Listing
Modified Wed Apr 8 22:06:45 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: hide all the label options just have generate all as the default

Revision 9108  Directory Listing
Modified Wed Apr 8 21:23:26 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: moved screengrab from toolbar into view control GUI; added undo/redo toolbar back; made screengrab entries trigger on focus out or enter

Revision 9107  Directory Listing
Modified Wed Apr 8 19:46:06 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: when the CLI is complete, don't show the last progress message, it makes it hard to visually tell that it's really done

Revision 9106  Directory Listing
Modified Wed Apr 8 19:18:32 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: free reference to node to avoid leak

Revision 9105  Directory Listing
Modified Wed Apr 8 18:54:14 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix typo

Revision 9104  Directory Listing
Modified Wed Apr 8 18:51:11 2009 UTC (8 years, 5 months ago) by yumin
Original Path: trunk
BUG: #526 "Analyze shouldn't be the default Save As format for volumes". Replaced with NRRD as default. Also, the fix allows you easily to change the orders of file formats displayed in the file-format-dropdown on the savedatawidget by arranging the file-format entries in "FileFormatTable of vtkDataFileFormatHelper.cxx".

Revision 9103  Directory Listing
Modified Wed Apr 8 18:49:41 2009 UTC (8 years, 5 months ago) by millerjv
Original Path: trunk
ENH: Added SliceControllers to Slices GUI

Revision 9102  Directory Listing
Modified Wed Apr 8 18:20:08 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: be a bit more clear about where the models are, and if you need to import a scene file because you didn't specify a model hierarchy node

Revision 9101  Directory Listing
Modified Wed Apr 8 18:09:40 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid calling GUI creation code before application has finished initializing

Revision 9100  Directory Listing
Modified Tue Apr 7 19:52:53 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: 409 made volume threshold always update

Revision 9099  Directory Listing
Modified Tue Apr 7 19:40:43 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: handle case of visual studio 7.1 that does not need upgraded package

Revision 9098  Directory Listing
Modified Tue Apr 7 19:11:59 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: make snapshots restore the nodes that are not in the scene including data

Revision 9097  Directory Listing
Modified Tue Apr 7 17:56:56 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
ENH: extra debugging output for extension building

Revision 9096  Directory Listing
Modified Tue Apr 7 17:32:26 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: adding/removing GUI observers on module Enter/Exit

Revision 9095  Directory Listing
Modified Tue Apr 7 17:20:59 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: bracket calls with debug macro

Revision 9094  Directory Listing
Modified Tue Apr 7 17:14:56 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: fix for windows compilation

Revision 9093  Directory Listing
Modified Tue Apr 7 16:47:44 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removing observers on Exit and adding observers on Enter

Revision 9092  Directory Listing
Modified Tue Apr 7 16:28:47 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: bracket calls to slice controller with ifdefs for debugging

Revision 9091  Directory Listing
Modified Tue Apr 7 16:28:35 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: bracket calls to slice controller with ifdefs for debugging

Revision 9090  Directory Listing
Modified Tue Apr 7 15:49:50 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed loading of models and scalar overlays thru this gui, tested fiducials, colorLUT and fiberBundles

Revision 9089  Directory Listing
Modified Tue Apr 7 15:48:53 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added window status text during buildGUI

Revision 9088  Directory Listing
Modified Tue Apr 7 14:10:41 2009 UTC (8 years, 5 months ago) by tokuda
Original Path: trunk
STYLE: added directory path igtlutil to the #include directives

Revision 9087  Directory Listing
Modified Tue Apr 7 12:30:19 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: add .exe to all window command filenames so they can be successfully converted to 8.3 filenames when needed by the extend.tcl script

Revision 9086  Directory Listing
Modified Tue Apr 7 12:27:30 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: adapt to change in slice controller configuration (scale is now indpenedent of entry)

Revision 9085  Directory Listing
Modified Tue Apr 7 11:14:24 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added content and fixes to existing content

Revision 9084  Directory Listing
Modified Tue Apr 7 11:13:14 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new image data for Welcome

Revision 9083  Directory Listing
Modified Tue Apr 7 00:59:15 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: oops forgot to check this in -- added event to track if a frame has been expanded or collapsed

Revision 9082  Directory Listing
Modified Mon Apr 6 22:07:51 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: made requested changes to module content and behavior

Revision 9081  Directory Listing
Modified Mon Apr 6 22:05:27 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: modified and added new image data for welcome module

Revision 9080  Directory Listing
Modified Mon Apr 6 21:34:36 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix for part 2 of bug 500 and also for bug 76.  Break apart the scale and the entry so the entry can always show the correct mm slice position even if the scale internally thinks it is at a slightly different spot.  Tested on the sample data provided with bug 500

Revision 9079  Directory Listing
Modified Mon Apr 6 20:19:59 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: modules relocation

Revision 9078  Directory Listing
Modified Mon Apr 6 20:14:02 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: modules relocation

Revision 9077  Directory Listing
Modified Mon Apr 6 17:39:29 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: add subvolume module requested by Ron for the 3.4 release

Revision 9076  Directory Listing
Modified Mon Apr 6 17:04:24 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: modules relocation

Revision 9075  Directory Listing
Modified Mon Apr 6 16:25:16 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: copy widget visible and use label outline flags so that they can be used properly in scene snapshots

Revision 9074  Directory Listing
Modified Mon Apr 6 15:16:14 2009 UTC (8 years, 5 months ago) by lantiga
Original Path: trunk
BUG: invoke scene edited event to make MRML tree widget update itself after the module has run

Revision 9073  Directory Listing
Modified Mon Apr 6 14:29:28 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: Fix the parameter names of the RegisterImages BatchMake module

Revision 9072  Directory Listing
Modified Mon Apr 6 14:19:36 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
BUG: Register Images BatchMake module had a wrong title

Revision 9071  Directory Listing
Modified Mon Apr 6 13:50:52 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: Add ResampleVolume BatchMake Module

Revision 9070  Directory Listing
Modified Mon Apr 6 13:45:29 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: BatchMake: Remove wrong directory name

Revision 9069  Directory Listing
Modified Mon Apr 6 13:39:23 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: Add ResampleVolume BatchMake Module

Revision 9068  Directory Listing
Modified Mon Apr 6 13:35:57 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: Add ResampleVolume BatchMake Module

Revision 9067  Directory Listing
Modified Mon Apr 6 12:04:12 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: remove stray backslash character in xml file

Revision 9066  Directory Listing
Modified Mon Apr 6 09:38:07 2009 UTC (8 years, 5 months ago) by lantiga
Original Path: trunk
ENH: add possibility of retaining the origin in the volume node rather than in the transform

Revision 9065  Directory Listing
Modified Sun Apr 5 21:24:57 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding new load panel to data module -- not fully tested yet.

Revision 9064  Directory Listing
Modified Sun Apr 5 21:24:02 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: increasing size of help panel to 20 lines...

Revision 9063  Directory Listing
Modified Sun Apr 5 21:21:33 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: putting in some null pointer checking...

Revision 9062  Directory Listing
Modified Sun Apr 5 21:20:41 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new script to handle loading of dti fiber bundles in data module

Revision 9061  Directory Listing
Modified Sun Apr 5 21:20:28 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new script to handle loading of dti fiber bundles in data module

Revision 9060  Directory Listing
Modified Sun Apr 5 21:17:15 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated resources for load panel in DataModule

Revision 9059  Directory Listing
Modified Sun Apr 5 21:15:28 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new image data for LoadPanel in Data Module

Revision 9058  Directory Listing
Modified Sun Apr 5 17:45:03 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
ENH: changed ROI seeding to Label seeding

Revision 9057  Directory Listing
Modified Sun Apr 5 17:41:45 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: check the RAS matrix for null

Revision 9056  Directory Listing
Modified Sun Apr 5 17:03:21 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
ENH: changed ROI seeding to Label seeding

Revision 9055  Directory Listing
Modified Sun Apr 5 14:41:47 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: remove reference to missing subdirectory

Revision 9054  Directory Listing
Modified Sun Apr 5 11:08:01 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: trying to track down crash from Ron's report.

Revision 9052  Directory Listing
Modified Sun Apr 5 00:18:33 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: bugfix - max tract length

Revision 9051  Directory Listing
Modified Sat Apr 4 22:48:50 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: update BatchMake to version 1-2 to enable new features in BatchProcessing modules

Revision 9050  Directory Listing
Modified Sat Apr 4 22:26:28 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: update BatchMake to version 1-2 to enable new features in BatchProcessing modules

Revision 9049  Directory Listing
Modified Sat Apr 4 22:21:49 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: ResampleVolumeBatchMake is the BatchMake version of the ResampleVolume module

Revision 9048  Directory Listing
Modified Sat Apr 4 22:21:34 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: ResampleVolumeBatchMake is the BatchMake version of the ResampleVolume module

Revision 9047  Directory Listing
Modified Sat Apr 4 22:21:20 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: ResampleVolumeBatchMake is the BatchMake version of the ResampleVolume module

Revision 9046  Directory Listing
Modified Sat Apr 4 22:20:50 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: ENH: ResampleVolumeBatchMake is the BatchMake version of the ResampleVolume module

Revision 9045  Directory Listing
Modified Sat Apr 4 22:16:58 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: ResampleVolumeBatchMake is the BatchMake version of the ResampleVolume module

Revision 9044  Directory Listing
Modified Sat Apr 4 22:16:38 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: ResampleVolumeBatchMake is the BatchMake version of the ResampleVolume module

Revision 9043  Directory Listing
Modified Sat Apr 4 21:40:20 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: Add a new virtual method that returns the arguments values as string.

Revision 9042  Directory Listing
Modified Sat Apr 4 21:36:49 2009 UTC (8 years, 5 months ago) by finetjul
Original Path: trunk
ENH: move the try{} statement to expose TCLAP::CommandLine and the TCLAP::Args for a dynamic access to the module command line argument.

Revision 9041  Directory Listing
Modified Sat Apr 4 10:39:09 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: more null pointer checking

Revision 9040  Directory Listing
Modified Fri Apr 3 19:28:02 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: trying to clean up (not sure what's causing ron's crash...)

Revision 9039  Directory Listing
Modified Fri Apr 3 19:20:42 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: more capitalization issues with CheckPoint/Checkpoint and button state management issues

Revision 9038  Directory Listing
Modified Fri Apr 3 19:04:43 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: change from Checkpoint to CheckPoint for consistency with icon names

Revision 9037  Directory Listing
Modified Fri Apr 3 19:00:39 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: add missing icons

Revision 9036  Directory Listing
Modified Fri Apr 3 18:58:20 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed changing layout problem in application toolbar

Revision 9035  Directory Listing
Modified Fri Apr 3 18:14:03 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk
ENH: Software ray casting as default. FPS slider controls software ray casting mapper.

Revision 9034  Directory Listing
Modified Fri Apr 3 17:17:28 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix capitlization issue in header filename (worked on windows, but not on unix)

Revision 9033  Directory Listing
Modified Fri Apr 3 15:26:59 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: refixed scalar only volume selection

Revision 9032  Directory Listing
Modified Fri Apr 3 11:35:43 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: remove unwanted DICOMParser from IO Factory and fix error macro bug trying to print null pointer

Revision 9031  Directory Listing
Modified Fri Apr 3 10:11:14 2009 UTC (8 years, 5 months ago) by lantiga
Original Path: trunk
ENH: Add ScriptedModuleInfo to Slicer Python module in order to access it programmatically or from the Python console

Revision 9030  Directory Listing
Modified Fri Apr 3 10:09:54 2009 UTC (8 years, 5 months ago) by lantiga
Original Path: trunk
ENH: explicitly print error info on exception

Revision 9029  Directory Listing
Modified Fri Apr 3 04:11:19 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: bugfix fa/mode

Revision 9028  Directory Listing
Modified Thu Apr 2 23:52:28 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk
ENH: minor GUI adjustment (reduce performance panel label width for different font/screen size)

Revision 9027  Directory Listing
Modified Thu Apr 2 20:25:45 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: cleaned up the ProcessGUIEvents method to (hopefully) avoid null pointer crashes.

Revision 9026  Directory Listing
Modified Thu Apr 2 16:40:27 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: not refer to buttons that haven't yet been created

Revision 9025  Directory Listing
Modified Wed Apr 1 20:52:12 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updating previous and next checkpoint icons

Revision 9024  Directory Listing
Modified Wed Apr 1 20:36:56 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding disabled version of checkpoint icon

Revision 9023  Directory Listing
Modified Wed Apr 1 19:04:08 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: switch to Checkpoint naming scheme and add new icons

Revision 9022  Directory Listing
Modified Wed Apr 1 19:03:23 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: change image names to match other icons

Revision 9021  Directory Listing
Modified Wed Apr 1 17:14:16 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: turn off legacy code from ITK per suggestion from Luis

Revision 9020  Directory Listing
Modified Wed Apr 1 15:54:36 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: icon for adding checkpoint

Revision 9019  Directory Listing
Modified Wed Apr 1 15:48:09 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk
BUG: fixed incorrect threshold calculation for volume rendering

Revision 9018  Directory Listing
Modified Wed Apr 1 15:35:13 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new checkpoint icons for editor

Revision 9017  Directory Listing
Modified Wed Apr 1 15:27:53 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new checkpoint icons for editor

Revision 9016  Directory Listing
Modified Wed Apr 1 14:27:49 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk
BUG: fix the limitation of the input images to have VTK_SHORT scalar
type

Revision 9015  Directory Listing
Modified Tue Mar 31 23:09:58 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk
BUG: fixed drift in IJK-RAS conversion for ROI selection

Revision 9014  Directory Listing
Modified Tue Mar 31 22:15:59 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix typos and naming issues for Tractography

Revision 9013  Directory Listing
Modified Tue Mar 31 18:17:19 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: enable 10 level undo/redo for editor

Revision 9012  Directory Listing
Modified Tue Mar 31 17:44:53 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: made fiducial seeding pay attention to integration step parameter

Revision 9011  Directory Listing
Modified Tue Mar 31 17:40:15 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: 151 fixed Undo/Redo and added it back into UI.
The problem was in Refrenceing nodes getting out of sync with scene nodes.

Revision 9010  Directory Listing
Modified Tue Mar 31 15:49:09 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix for performance issue caused by too many fiducial updates.  Updates are now handled through the event loop.  Result is about 33% performance improvement on loading scenes with many fiducials

Revision 9009  Directory Listing
Modified Mon Mar 30 22:01:27 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: don't crash when selecting toolbar

Revision 9008  Directory Listing
Modified Mon Mar 30 17:21:08 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
ENH: include the strings svn or cvs in the name to make it clearer

Revision 9007  Directory Listing
Modified Mon Mar 30 17:11:09 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: add scrollbars to table

Revision 9006  Directory Listing
Modified Mon Mar 30 15:35:02 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: add custom gui panel and progress for effect

Revision 9005  Directory Listing
Modified Mon Mar 30 15:18:03 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
ENH: add progress methods for time consuming island operations

Revision 9004  Directory Listing
Modified Sun Mar 29 20:04:35 2009 UTC (8 years, 5 months ago) by fedorov
Original Path: trunk
BUG: add a check to prevent layout reset to FourUp on Slicer startup

Revision 9003  Directory Listing
Modified Sun Mar 29 16:36:07 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix typo in xml generate that led to bottom panels popping up during restores of scene snapshots

Revision 9002  Directory Listing
Modified Sun Mar 29 16:29:05 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: cleaning code

Revision 9001  Directory Listing
Modified Sun Mar 29 14:16:11 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: renaming scripts

Revision 9000  Directory Listing
Modified Sun Mar 29 14:00:45 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: bugfix - screenshot issue

Revision 8999  Directory Listing
Modified Sat Mar 28 16:46:48 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: ROISelect editor module removed at Lauren's request

Revision 8998  Directory Listing
Modified Fri Mar 27 21:17:24 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: building issue for windows and example modules

Revision 8997  Directory Listing
Modified Fri Mar 27 19:24:21 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updating Toolbar to include a ScreenGrab icon and toplevel widget with screengrab options

Revision 8996  Directory Listing
Modified Fri Mar 27 19:22:58 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: updating name of icon used for SceneSnapshots (used to be called ScreenGrabButtonIcon)

Revision 8995  Directory Listing
Modified Fri Mar 27 19:22:26 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: updating name of icon used for SceneSnapshots (used to be called ScreenGrabButtonIcon)

Revision 8994  Directory Listing
Modified Fri Mar 27 19:20:24 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: adding #ifndefs in .h file to prevent mutliple definitions and clearing out string before reassigning value

Revision 8993  Directory Listing
Modified Fri Mar 27 19:18:01 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding script for screenshots

Revision 8992  Directory Listing
Modified Fri Mar 27 19:16:43 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updateing resources

Revision 8991  Directory Listing
Modified Fri Mar 27 19:14:24 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding screenshot icon for toolbar

Revision 8990  Directory Listing
Modified Fri Mar 27 19:13:51 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: using the NA-MIC logo without the line as Ron requested

Revision 8989  Directory Listing
Modified Fri Mar 27 19:12:39 2009 UTC (8 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Added first draft of welcome module as per Ron's request

Revision 8988  Directory Listing
Modified Fri Mar 27 16:58:43 2009 UTC (8 years, 5 months ago) by tokuda
Original Path: trunk
BUG: Slice orienting function -- avoid the problem that Slicer automatically switches slice orientation.

Revision 8987  Directory Listing
Modified Fri Mar 27 16:00:00 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix copy/paste error refering to package name

Revision 8986  Directory Listing
Modified Fri Mar 27 14:42:56 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
ENH: made default glyph spacing 5, performance improvements

Revision 8985  Directory Listing
Modified Fri Mar 27 00:21:54 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: parse bugfix

Revision 8984  Directory Listing
Modified Thu Mar 26 23:07:25 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: source the versioner script rather then execing it

Revision 8983  Directory Listing
Modified Thu Mar 26 23:04:26 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: extra example extension modules

Revision 8982  Directory Listing
Modified Thu Mar 26 23:03:17 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid calling tclsh directly for better windows compatibility

Revision 8981  Directory Listing
Modified Thu Mar 26 21:44:26 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: enable the IdentifyIsland effect

Revision 8980  Directory Listing
Modified Thu Mar 26 18:33:00 2009 UTC (8 years, 5 months ago) by hliu
Original Path: trunk
ENH: added CenterImage().

Revision 8979  Directory Listing
Modified Thu Mar 26 15:29:29 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: change Measurement to Measure to comply with the Westin published naming conventions

Revision 8978  Directory Listing
Modified Thu Mar 26 15:28:10 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: re-enable the IdentifyIslands effect to use new vtkITK code

Revision 8977  Directory Listing
Modified Thu Mar 26 15:26:01 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: use named (slicerbot) user to login at nitrc since anonymous isn't correctly supported

Revision 8976  Directory Listing
Modified Wed Mar 25 23:01:37 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
ENH: new ITK implementation of island operations to replace old code

Revision 8975  Directory Listing
Modified Wed Mar 25 20:34:53 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: detect non-uniform slice spacing and give warning dialog

Revision 8974  Directory Listing
Modified Wed Mar 25 18:36:17 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: several bug fixes related to unique naming of tree nodes when dicom series have the same names

Revision 8973  Directory Listing
Modified Wed Mar 25 14:44:28 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: handle cvs based extension repositories

Revision 8972  Directory Listing
Modified Wed Mar 25 13:07:37 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: setup slicer version information when building extensions

Revision 8971  Directory Listing
Modified Wed Mar 25 13:07:13 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: don't print to stderr since other programs may interpret this as an error code

Revision 8970  Directory Listing
Modified Wed Mar 25 12:23:09 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: always remove build and install directories to workaround problem passing install directory on cmake command line

Revision 8969  Directory Listing
Modified Tue Mar 24 21:26:40 2009 UTC (8 years, 5 months ago) by tgl
Original Path: trunk
ENH display only a summary of the description.
ENH do a better job of parsing the s3ext file.

Revision 8968  Directory Listing
Modified Tue Mar 24 21:18:33 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: include anonymous login info

Revision 8967  Directory Listing
Modified Tue Mar 24 21:15:14 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
ENH: adapt extension daemon to match new protocol

Revision 8966  Directory Listing
Modified Tue Mar 24 21:09:15 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
ENH: server-side script for accepting new extensions

Revision 8965  Directory Listing
Modified Tue Mar 24 20:08:31 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: utility script to add a version description file to the slicer3 build tree

Revision 8964  Directory Listing
Modified Tue Mar 24 20:04:11 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
ENH: added StartModify/EndModify to MRML nodes Copy and ReadXML methods

Revision 8963  Directory Listing
Modified Tue Mar 24 19:12:48 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: turn off modified events when loading from a file, as it speeds things up a lot

Revision 8962  Directory Listing
Modified Tue Mar 24 18:27:40 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk
ENH: Adjustment on initial rendering parameters for CPU ray casting.

Revision 8961  Directory Listing
Modified Tue Mar 24 14:36:09 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
COMP: control the verbose makefiles based on command line flag

Revision 8960  Directory Listing
Modified Tue Mar 24 14:24:17 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk
BUG FIXED: incorrect MIP rendering result in GPU ray casting
ENH: Adjustment on initial rendering parameters

Revision 8959  Directory Listing
Modified Tue Mar 24 13:40:51 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: clean for next version

Revision 8958  Directory Listing
Modified Tue Mar 24 13:37:12 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: numpy files generator for multiprocessing version

Revision 8957  Directory Listing
Modified Tue Mar 24 13:27:39 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: remove for fix

Revision 8956  Directory Listing
Modified Tue Mar 24 13:27:21 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: remove for fix

Revision 8955  Directory Listing
Modified Tue Mar 24 13:11:22 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: numpy support for multiprocessing

Revision 8954  Directory Listing
Modified Tue Mar 24 13:10:40 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: numpy support for multiprocessing

Revision 8953  Directory Listing
Modified Tue Mar 24 13:07:47 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: numpy support for multiprocessing

Revision 8952  Directory Listing
Modified Tue Mar 24 13:07:39 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: numpy support for multiprocessing

Revision 8951  Directory Listing
Modified Tue Mar 24 13:07:29 2009 UTC (8 years, 5 months ago) by jvs
Original Path: trunk
ENH: numpy support for multiprocessing

Revision 8950  Directory Listing
Modified Mon Mar 23 21:45:34 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid running a windows build that may hang

Revision 8949  Directory Listing
Modified Mon Mar 23 21:36:53 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: error handling on windows and missing site certificate for svn over https

Revision 8948  Directory Listing
Modified Mon Mar 23 21:05:01 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
STYLE: better reporting

Revision 8947  Directory Listing
Modified Mon Mar 23 20:53:50 2009 UTC (8 years, 5 months ago) by naucoin
Original Path: trunk
BUG: let the user know that something's gone wrong when the toolbar can't access module guis

Revision 8946  Directory Listing
Modified Mon Mar 23 20:38:49 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: better handling of dependencies and errors

Revision 8945  Directory Listing
Modified Mon Mar 23 19:38:44 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk
ENH: Code cleaning up. Fixed New() and Delete() paring. Minor GUI adjustment.

Revision 8943  Directory Listing
Modified Mon Mar 23 16:38:19 2009 UTC (8 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: fixed fiber display 

Revision 8942  Directory Listing
Modified Mon Mar 23 15:10:02 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk
ENH: New VolumeRendering GUI and logic. Code cleaning up.

Revision 8941  Directory Listing
Modified Mon Mar 23 15:00:54 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk
ENH: New VolumeRendering GUI and logic. Code cleaning up.

Revision 8940  Directory Listing
Modified Mon Mar 23 14:58:22 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk
ENH: New VolumeRendering GUI and logic. Code cleaning up.

Revision 8939  Directory Listing
Modified Mon Mar 23 14:54:50 2009 UTC (8 years, 5 months ago) by vrnova
Original Path: trunk
ENH: New VolumeRendering GUI and logic. Code cleaning up.

Revision 8937  Directory Listing
Modified Mon Mar 23 12:07:20 2009 UTC (8 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid overwriting matrix argument (thanks Luca and Daniel\!)

Revision 8936  Directory Listing
Modified Mon Mar 23 03:33:46 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk
ENH: bugfixes + optimization

Revision 8935  Directory Listing
Modified Mon Mar 23 03:09:23 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk
ENH: bugfixes + optimization

Revision 8934  Directory Listing
Modified Sun Mar 22 17:28:37 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk
ENH: code cleaning

Revision 8933  Directory Listing
Modified Sun Mar 22 17:14:12 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk
ENH: bugfixes + speed optimization

Revision 8932  Directory Listing
Modified Sun Mar 22 17:00:47 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk
ENH: bugfixes + speed optimization

Revision 8931  Directory Listing
Modified Sun Mar 22 16:58:37 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk
ENH: bugfixes + speed optimization

Revision 8930  Directory Listing
Modified Sat Mar 21 07:03:57 2009 UTC (8 years, 6 months ago) by demian
Original Path: trunk
PERF: now fibers are not forced to be rendered when they are not visible.

Revision 8929  Directory Listing
Modified Sat Mar 21 07:00:54 2009 UTC (8 years, 6 months ago) by demian
Original Path: trunk
ENH:environment variables now are passed from the Tk environment to python

Revision 8927  Directory Listing
Modified Fri Mar 20 17:28:51 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
BUG-FIXED: handle reading double tensors

Revision 8926  Directory Listing
Modified Fri Mar 20 15:55:33 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: shortname is only available on windows

Revision 8925  Directory Listing
Modified Fri Mar 20 15:47:46 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: add cmake project name as a field (since it is different than the final module library/executable name)

Revision 8924  Directory Listing
Modified Fri Mar 20 15:47:00 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: make extension script work on windows

Revision 8923  Directory Listing
Modified Fri Mar 20 14:31:34 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: handle svn servers that require passwords

Revision 8922  Directory Listing
Modified Fri Mar 20 13:36:56 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: improved error handling and reporting in extension builder script

Revision 8921  Directory Listing
Modified Fri Mar 20 01:46:03 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
ENH: enable selecting the model editor from the scene tree

Revision 8920  Directory Listing
Modified Thu Mar 19 22:15:54 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: fix Edit Properties context menus to select the node after entering the module - models GUI still needs to be fixes to update model hierarchy and node selector correctly

Revision 8919  Directory Listing
Modified Thu Mar 19 21:15:30 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: add confirmation dialog to delete menu items

Revision 8918  Directory Listing
Modified Thu Mar 19 20:50:39 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: keep track of selected element in the node selector list for context menu actions and focus in the text window for easier node renaming

Revision 8917  Directory Listing
Modified Thu Mar 19 20:28:56 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: put tractograpy modules into correct category

Revision 8916  Directory Listing
Modified Thu Mar 19 20:19:50 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
STYLE: fix indents

Revision 8915  Directory Listing
Modified Thu Mar 19 19:44:58 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
ENH: fix module menu layout to match the documentation on the wiki

Revision 8914  Directory Listing
Modified Thu Mar 19 19:43:10 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: tweaks to distance map fiducials (not currently being used)

Revision 8913  Directory Listing
Modified Thu Mar 19 19:41:42 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: turn off progress meter to avoid update loop

Revision 8912  Directory Listing
Modified Thu Mar 19 18:02:06 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: remove older code (use python stochastic tractography instead)

Revision 8911  Directory Listing
Modified Thu Mar 19 18:01:22 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: mark volume as dirty if the header info has changed

Revision 8910  Directory Listing
Modified Thu Mar 19 18:00:45 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
STYLE: remove unneeded check

Revision 8909  Directory Listing
Modified Thu Mar 19 18:00:23 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
STYLE: remove warning message

Revision 8908  Directory Listing
Modified Thu Mar 19 17:59:25 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
ENH: extra placeholder proc for model rasterizing

Revision 8907  Directory Listing
Modified Thu Mar 19 17:58:42 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
STYLE: extra comment

Revision 8906  Directory Listing
Modified Thu Mar 19 17:54:49 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
STYLE: improved example for wizard

Revision 8905  Directory Listing
Modified Thu Mar 19 17:53:46 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: work in progress fix to island operations upgrade

Revision 8904  Directory Listing
Modified Thu Mar 19 17:51:36 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: revisions to support external module builds

Revision 8903  Directory Listing
Modified Thu Mar 19 16:02:10 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
BUG-FIXED: made default volume rendering to be raycaster, only allow scalar volume selection.
Made Fiducial Seeding defaults as requested by JJ.

Revision 8902  Directory Listing
Modified Wed Mar 18 16:08:07 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
ENH: clear output of filter

Revision 8901  Directory Listing
Modified Wed Mar 18 02:36:21 2009 UTC (8 years, 6 months ago) by blezek
Original Path: trunk
BUG: EndoNavTracking not yet checked in

Revision 8900  Directory Listing
Modified Wed Mar 18 00:14:23 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
ENH: added Line/Tube selection to Fiducial Seeding
BUG 475

Revision 8899  Directory Listing
Modified Tue Mar 17 22:47:38 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
BUG: fixed file io to have deformable metric working

Revision 8898  Directory Listing
Modified Tue Mar 17 22:33:27 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
ENH: simplified

Revision 8897  Directory Listing
Modified Tue Mar 17 19:17:34 2009 UTC (8 years, 6 months ago) by naucoin
Original Path: trunk
BUG: back to the old style of writing node info in xml to work around a bug in scene snap shots

Revision 8896  Directory Listing
Modified Tue Mar 17 17:45:43 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: better management of context menu (still a work in process)

Revision 8895  Directory Listing
Modified Tue Mar 17 15:55:29 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
BUG: install command line in Slicer/bin

Revision 8894  Directory Listing
Modified Tue Mar 17 04:56:18 2009 UTC (8 years, 6 months ago) by jvs
Original Path: trunk
ENH: bugfix - installation

Revision 8893  Directory Listing
Modified Mon Mar 16 19:51:32 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: remove unused variable to avoid warning

Revision 8892  Directory Listing
Modified Mon Mar 16 19:50:28 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: be sure to hold registered pointer to observation when running either a script or a command callback and then only release it after the log file has been written

Revision 8891  Directory Listing
Modified Mon Mar 16 19:48:54 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: avoid crash when switching to model maker by delaying switch until after the editor gui has cleaned up and removed widgets.  Also switch to event broker

Revision 8889  Directory Listing
Modified Mon Mar 16 18:18:42 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
STYLE: fix indent

Revision 8888  Directory Listing
Modified Mon Mar 16 16:30:31 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: don't display PinOpen or GoToEditor when edit box is used as a widget

Revision 8887  Directory Listing
Modified Mon Mar 16 16:10:07 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
ENH: save/restore geometry of favorites and directory browser split frames

Revision 8886  Directory Listing
Modified Mon Mar 16 15:59:43 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
ENH: save/restore geometry of dicom attribute columns

Revision 8885  Directory Listing
Modified Mon Mar 16 15:47:09 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: remove unneeded semicolons

Revision 8884  Directory Listing
Modified Mon Mar 16 15:34:28 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
ENH: address usability of Node Selectors by adding helper class to rename and delete nodes directoy from the context menu (still in-process)

Revision 8883  Directory Listing
Modified Mon Mar 16 15:33:07 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: clear selection when cutting or deleting to avoid warning message later

Revision 8881  Directory Listing
Modified Sun Mar 15 21:02:06 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: update to latest numpy (and scipy)

Revision 8880  Directory Listing
Modified Sun Mar 15 19:34:32 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
ENH: namings for intermediate and analysis results revisited

Revision 8879  Directory Listing
Modified Sun Mar 15 18:41:26 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: don't add fiducial when bringing up python interactor

Revision 8878  Directory Listing
Modified Sat Mar 14 19:58:21 2009 UTC (8 years, 6 months ago) by aylward
Original Path: trunk
ENH: Reduced compile time when 2D image support isn't needed


Revision 8877  Directory Listing
Modified Sat Mar 14 17:54:48 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
BUG: prevent slice offset reset when going to the ROI selection step

Revision 8876  Directory Listing
Modified Fri Mar 13 18:30:29 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
BUG-FIXED: 498 Handle overtire of exitsting track nodes

Revision 8875  Directory Listing
Modified Fri Mar 13 17:24:30 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
ENH: performance optimization for FiducalSeeding

Revision 8874  Directory Listing
Modified Fri Mar 13 14:27:03 2009 UTC (8 years, 6 months ago) by vrnova
Original Path: trunk
ENH: minor update on volume rendering module GUI

Revision 8873  Directory Listing
Modified Fri Mar 13 03:43:54 2009 UTC (8 years, 6 months ago) by lorensen
Original Path: trunk
ENH: Added documentation url.

Revision 8872  Directory Listing
Modified Fri Mar 13 03:02:29 2009 UTC (8 years, 6 months ago) by lorensen
Original Path: trunk
COMP: VS7 could not compile with ImageType::ConstPointer. Substituted TImage::ConstPointer.

Revision 8871  Directory Listing
Modified Thu Mar 12 00:06:33 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
BUG-FIXED: fixed ID's in the scene snapshot

Revision 8870  Directory Listing
Modified Wed Mar 11 23:07:41 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
ENH: avoid crash on NULL id in scene snapshots

Revision 8869  Directory Listing
Modified Wed Mar 11 19:27:45 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
BUG: fixed execution with non-ITK registration

Revision 8866  Directory Listing
Modified Wed Mar 11 18:38:07 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: modified logic for getting filename and extension from the URI. Logic used to look for first '.' in the uri to determine starting point for file extension and version number. now it looks for last instance of '.' in the uri to find these things. Works better for files with name such as DiffusionEditor_1._BaselineNode.nrrd

Revision 8865  Directory Listing
Modified Wed Mar 11 18:13:48 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: making directory column better accommodate the length of the directory string; previously it was often clipped and no scrollbar would show up to view entire string. The SetColumnWidth doesn't always track the font size as well as it should...

Revision 8864  Directory Listing
Modified Wed Mar 11 16:23:02 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: putting in calls to supress bottom panel visibility and remove option to toggle its visibility from layout menu. Hopefull ythis fixes the pop-up empty panel problem.

Revision 8863  Directory Listing
Modified Wed Mar 11 15:19:46 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
ENH: initialize fiber display UI

Revision 8862  Directory Listing
Modified Tue Mar 10 22:01:14 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
ENH: use label layer for displaying segmentation and analysis results

Revision 8861  Directory Listing
Modified Tue Mar 10 17:56:09 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
ENH: reworked fiber bundle display using tabs, add scalar col,or visibility

Revision 8859  Directory Listing
Modified Mon Mar 9 17:01:51 2009 UTC (8 years, 6 months ago) by naucoin
Original Path: trunk
BUG: comment out debugging print outs

Revision 8858  Directory Listing
Modified Mon Mar 9 16:41:58 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: add missing fiducial/point example

Revision 8857  Directory Listing
Modified Mon Mar 9 15:40:39 2009 UTC (8 years, 6 months ago) by hliu
Original Path: trunk
BUG: fixed memory leaks.

Revision 8855  Directory Listing
Modified Mon Mar 9 02:16:11 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixing remote UL/DL for multi-volume, fiducials, freesurfer data

Revision 8854  Directory Listing
Modified Mon Mar 9 02:14:59 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding sister method CopyData to mimic what WriteData does for FreeSurfer datasets that have no writers. This just copies the FreeSurfer data from its orig on-disk location to cache path, to set up for remote upload.

Revision 8853  Directory Listing
Modified Mon Mar 9 02:13:03 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding method to set a SlicerDataType for remoteIO on any storable node. We may move this out of here, but for now it seems a reasonable place.

Revision 8852  Directory Listing
Modified Mon Mar 9 02:11:38 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding a new event on the scene for signalling new metadata added

Revision 8851  Directory Listing
Modified Mon Mar 9 02:10:14 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing default storage node creation to call subclass method

Revision 8850  Directory Listing
Modified Mon Mar 9 02:08:44 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing remote upload and tagging for FreeSurfer data

Revision 8849  Directory Listing
Modified Mon Mar 9 02:07:31 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: testing with scrolling

Revision 8848  Directory Listing
Modified Sun Mar 8 00:36:51 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
BUG: module output redirection back to normal

Revision 8847  Directory Listing
Modified Fri Mar 6 19:59:00 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
BUG-FIXED: 467
Update glyphs in 3D view while moving slice when the slice is not visible.

Revision 8846  Directory Listing
Modified Fri Mar 6 17:21:05 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
BUG-FIXED: fixed slice box computation in vtkSlicerSliceLogic::GetVolumeSliceDimensions()

Revision 8845  Directory Listing
Modified Fri Mar 6 16:27:20 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
BUG-FIXED: 458
Update Window level /threshold when changing tensor scalar selection

Revision 8844  Directory Listing
Modified Fri Mar 6 15:20:24 2009 UTC (8 years, 6 months ago) by alexy
Original Path: trunk
BUG-FIXED: 410 
Fixed computation of slice bounds for rotated slice.

Revision 8843  Directory Listing
Modified Thu Mar 5 20:31:46 2009 UTC (8 years, 6 months ago) by naucoin
Original Path: trunk
BUG: use a subdir of the destination dir for temporary writing, to avoid cross mount point rename failure

Revision 8842  Directory Listing
Modified Thu Mar 5 20:30:02 2009 UTC (8 years, 6 months ago) by naucoin
Original Path: trunk
BUG: unprotect the reset nth filename/uri so that relative file paths can be updated. Make FileName a special case of GetFullNameFromNthFileName, deal with the scene being null, and the scene root dir being ./

Revision 8841  Directory Listing
Modified Thu Mar 5 20:12:18 2009 UTC (8 years, 6 months ago) by naucoin
Original Path: trunk
BUG: preserve the old state of the disable modified event var

Revision 8840  Directory Listing
Modified Thu Mar 5 04:30:27 2009 UTC (8 years, 6 months ago) by tgl
Original Path: trunk
ENH download, parse and add information from the .s3ext files

Revision 8839  Directory Listing
Modified Thu Mar 5 01:47:30 2009 UTC (8 years, 6 months ago) by tokuda
Original Path: trunk
BUG: default window/level calculation.

Revision 8838  Directory Listing
Modified Wed Mar 4 22:33:07 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
BUG: removed unnecessary dependency on EMSegmenter

Revision 8837  Directory Listing
Modified Wed Mar 4 22:09:09 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed add new tag and toplevel behavior

Revision 8836  Directory Listing
Modified Wed Mar 4 21:44:08 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
BUG: fixed another memory leak

Revision 8835  Directory Listing
Modified Wed Mar 4 21:23:14 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: updating display. calling ModalOn() method seems to block display update for some reason. Doing the grab via the script() method.

Revision 8834  Directory Listing
Modified Wed Mar 4 20:12:02 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: setting server on node if server is null (not yet set) or changed

Revision 8833  Directory Listing
Modified Wed Mar 4 19:55:18 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed and exposed the AddNewServer functionality

Revision 8832  Directory Listing
Modified Wed Mar 4 17:14:30 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: regrouped icons for clarity (address Ron's comment that the main functionality was not clear enough)

Revision 8831  Directory Listing
Modified Wed Mar 4 15:32:32 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removing undo/redo toolbar and menu options and removing PublishToXNAT(enterprise) option which uses old xnat (Arcput) tools, and setting asynchronous IO option to false by default

Revision 8830  Directory Listing
Modified Wed Mar 4 08:40:35 2009 UTC (8 years, 6 months ago) by demian
Original Path: trunk
ENH: Python console environment is gathered from the TCL environment array env

Revision 8829  Directory Listing
Modified Wed Mar 4 01:41:50 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: addressing unused variable warning on Dashboard

Revision 8828  Directory Listing
Modified Tue Mar 3 21:56:58 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding help, modifying logic to import new scene instead of close out old by default

Revision 8827  Directory Listing
Modified Tue Mar 3 21:49:21 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: mods to improve Update of Downloadpanel so it's not as greedy during long downloads

Revision 8826  Directory Listing
Modified Tue Mar 3 21:37:58 2009 UTC (8 years, 6 months ago) by naucoin
Original Path: trunk
BUG: the scene's root dir wasn't set when saving storage nodes

Revision 8825  Directory Listing
Modified Tue Mar 3 21:06:47 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing the filename when no version number is appended

Revision 8824  Directory Listing
Modified Tue Mar 3 20:09:31 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: making sure that any node pointing to data in the cache directory is marked ModifiedSinceReadOn() since the file is vulnerable to being overwritten or deleted.

Revision 8823  Directory Listing
Modified Tue Mar 3 18:57:55 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: trimming trailing version characters off of a filename extracted from an XND URI. This was leading to a crash in vtkMRMLVolumeArchetypeStorageNode's ReadData method.

Revision 8822  Directory Listing
Modified Mon Mar 2 21:00:37 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
ENH: extra check of the image data

Revision 8821  Directory Listing
Modified Mon Mar 2 20:52:02 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk
BUG: disabling output redirect trying to catch bug #440

Revision 8820  Directory Listing
Modified Mon Mar 2 18:27:03 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
STYLE: moved the Category instance variable to the vtkSlicerModuleGUI

Revision 8819  Directory Listing
Modified Mon Mar 2 17:52:54 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: making popup wider; text was being clipped

Revision 8818  Directory Listing
Modified Mon Mar 2 17:45:41 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing popup and focus behavior or wait message and adding acknowledgement logos

Revision 8817  Directory Listing
Modified Mon Mar 2 17:44:38 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing popup and focus behavior of wait message

Revision 8816  Directory Listing
Modified Mon Mar 2 17:21:58 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: workflow engine code moved to na-mic sandbox (http://svn.na-mic.org/NAMICSandBox/trunk/WFEngineModule)

Revision 8815  Directory Listing
Modified Mon Mar 2 16:43:19 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: add unified slicer python header file (with warning suppression code)

Revision 8814  Directory Listing
Modified Mon Mar 2 16:32:21 2009 UTC (8 years, 6 months ago) by millerjv
Original Path: trunk
ENH: make deformation field output a hidden parameter to keep it out of the Slicer3 GUI

Revision 8813  Directory Listing
Modified Mon Mar 2 16:31:09 2009 UTC (8 years, 6 months ago) by millerjv
Original Path: trunk
ENH: allow <image> parameters to be hidden

Revision 8812  Directory Listing
Modified Mon Mar 2 16:23:31 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: fix out of date reference to a module

Revision 8811  Directory Listing
Modified Mon Mar 2 16:21:51 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: remove orphaned module

Revision 8810  Directory Listing
Modified Mon Mar 2 14:28:33 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: avoid warnings when building python (avoid mismatch betweent the way Python defines _LARGEFILE_SOURCE compared to the way kwsys defines it

Revision 8809  Directory Listing
Modified Mon Mar 2 14:25:34 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: export python library references for use by externally build modules

Revision 8808  Directory Listing
Modified Mon Mar 2 14:24:50 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: export python library references for use by externally build modules

Revision 8807  Directory Listing
Modified Mon Mar 2 14:24:02 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: export python library references for use by externally build modules

Revision 8806  Directory Listing
Modified Mon Mar 2 14:22:50 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: add workaround for apple libgl bug

Revision 8805  Directory Listing
Modified Mon Mar 2 13:10:08 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
ENH: add ivar and setter for easier use in scripted modules

Revision 8804  Directory Listing
Modified Mon Mar 2 02:45:57 2009 UTC (8 years, 6 months ago) by millerjv
Original Path: trunk
ENH: add an index to module

Revision 8803  Directory Listing
Modified Mon Mar 2 02:29:50 2009 UTC (8 years, 6 months ago) by millerjv
Original Path: trunk
ENH: Added an "Index" to Modules to facilitate module list order within a category (menu).  Modules within a category are now sorted by index and then by name. Builtin modules can override the method GetIndex() to prescribe a position. Command line modules can use the <index> tag to indicate an order.  Modules with an index are always displayed before modules without an index (default index is the maximum value of a short, i.e. the last position).



Revision 8802  Directory Listing
Modified Mon Mar 2 01:43:50 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added wait widget, changed to tab format, cleaning up dashboard warnings

Revision 8801  Directory Listing
Modified Mon Mar 2 01:40:38 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removing tilde files added by mistake

Revision 8800  Directory Listing
Modified Mon Mar 2 01:40:14 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removing tilde files added by mistake

Revision 8799  Directory Listing
Modified Mon Mar 2 01:39:58 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: removing tilde files added by mistake

Revision 8798  Directory Listing
Modified Mon Mar 2 01:38:17 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: new pop-up wait window for remote operations

Revision 8797  Directory Listing
Modified Sun Mar 1 20:19:10 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: disable distance transform model module due to bugs and disuse

Revision 8796  Directory Listing
Modified Sun Mar 1 19:03:10 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: fix method name and STYLE: change Parameterset to Parameter Set in GUI

Revision 8795  Directory Listing
Modified Sun Mar 1 18:50:25 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
STYLE: change methods from Parameterset to ParameterSet

Revision 8794  Directory Listing
Modified Sun Mar 1 18:49:03 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: use double rather than int to store the min and max of the volume.  Also COMP: fix warnings

Revision 8793  Directory Listing
Modified Sun Mar 1 18:45:50 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: fix warning

Revision 8792  Directory Listing
Modified Sun Mar 1 18:45:21 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: fix warnings

Revision 8791  Directory Listing
Modified Sun Mar 1 18:44:36 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: fix warnings

Revision 8790  Directory Listing
Modified Sun Mar 1 18:43:53 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: remove warning from unused var

Revision 8789  Directory Listing
Modified Sun Mar 1 02:57:57 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: calling UpdateFileList on remote upload operations, and fixing upload for storage nodes that have no files in the fileNameList.

Revision 8788  Directory Listing
Modified Sun Mar 1 02:55:50 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added new event

Revision 8787  Directory Listing
Modified Sun Mar 1 02:54:29 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: changed the order of event handling; logic responds to node, and then invokes an event via the node for GUI; previously, both gui and logic were listening for same event from node

Revision 8786  Directory Listing
Modified Sun Mar 1 02:52:57 2009 UTC (8 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: improved the update of data transfer display in GUI and disabled the asynchronous IO option for now

Revision 8785  Directory Listing
Modified Sun Mar 1 02:22:35 2009 UTC (8 years, 6 months ago) by tgl
Original Path: trunk
ENH no longer used

Revision 8784  Directory Listing
Modified Sat Feb 28 21:43:09 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: check for gui pointer being null to handle gui-less extensions

Revision 8783  Directory Listing
Modified Sat Feb 28 20:49:13 2009 UTC (8 years, 6 months ago) by tgl
Original Path: trunk
ENH handle the condition when no GUI is to be defined

Revision 8782  Directory Listing
Modified Sat Feb 28 19:44:47 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
BUG: set default Root directory for scene files in the current home dir

Revision 8781  Directory Listing
Modified Sat Feb 28 13:25:12 2009 UTC (8 years, 6 months ago) by millerjv
Original Path: trunk
BUG: grab the 'default' crosshair not the 0th crosshair

Revision 8780  Directory Listing
Modified Fri Feb 27 22:28:47 2009 UTC (8 years, 6 months ago) by millerjv
Original Path: trunk
BUG: Crosshair is now click-to-drag. You can drag the center or the horizontal or vertical lines in the basic crosshair

Revision 8779  Directory Listing
Modified Fri Feb 27 22:28:36 2009 UTC (8 years, 6 months ago) by tgl
Original Path: trunk
ENH delete commented code

Revision 8778  Directory Listing
Modified Fri Feb 27 21:24:44 2009 UTC (8 years, 6 months ago) by tgl
Original Path: trunk
ENH fixup format to latest

Revision 8777  Directory Listing
Modified Fri Feb 27 21:20:21 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: support dependencies on internal slicer modules (in process)

Revision 8776  Directory Listing
Modified Fri Feb 27 21:19:31 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: initial checkin of external loadable module (in progress)

Revision 8774  Directory Listing
Modified Fri Feb 27 20:54:29 2009 UTC (8 years, 6 months ago) by hliu
Original Path: trunk
BUG: fixed memory leaks.

Revision 8773  Directory Listing
Modified Fri Feb 27 20:52:46 2009 UTC (8 years, 6 months ago) by hliu
Original Path: trunk
BUG: fixed memory leaks.

Revision 8772  Directory Listing
Modified Fri Feb 27 19:58:56 2009 UTC (8 years, 6 months ago) by hliu
Original Path: trunk
BUG: fixed memory leaks.

Revision 8771  Directory Listing
Modified Fri Feb 27 19:58:39 2009 UTC (8 years, 6 months ago) by naucoin
Original Path: trunk
BUG: avoid writing twice, use rename which will succeed if the temp files are on the same device as the final destination. Use available GetFullNameFromNthFileName

Revision 8770  Directory Listing
Modified Fri Feb 27 19:38:17 2009 UTC (8 years, 6 months ago) by pieper
Original Path: trunk
COMP: allow GUIless loadable modules

Revision 8769  Directory Listing
Modified Fri Feb 27 19:16:44 2009 UTC (8 years, 6 months ago) by hayes
Original Path: trunk
ENH: Changing module cache to ~ so state is saved on OSX after reboot

Revision 8768  Directory Listing
Modified Fri Feb 27 18:16:49 2009 UTC (8 years, 6 months ago) by fedorov
Original Path: trunk