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Revision 13936  Directory Listing
Modified Thu Jun 24 15:27:48 2010 UTC (7 years, 2 months ago) by nhageman
ENH: Optimizize flag to CMakeLists.txt

Revision 13910  Directory Listing
Modified Tue Jun 22 17:06:48 2010 UTC (7 years, 2 months ago) by nhageman
ENH: Changes to XML and CMake files

Revision 13864  Directory Listing
Modified Sun Jun 20 04:31:34 2010 UTC (7 years, 3 months ago) by nhageman
ENH: Changes to Slicer3 CMakeLists.txt

Revision 13863  Directory Listing
Modified Sun Jun 20 04:25:47 2010 UTC (7 years, 3 months ago) by nhageman
ENH: Configuration Files

Revision 13862  Directory Listing
Modified Sun Jun 20 03:17:00 2010 UTC (7 years, 3 months ago) by nhageman
Copied from: trunk revision 13861
ENH: new branch to test Fluid Mechanics Tractography Module

Revision 13861  Directory Listing
Modified Sat Jun 19 17:35:39 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
ENH: Add gradient display into qSlicerScalarVolumeDisplayWidget

Revision 13860  Directory Listing
Modified Sat Jun 19 17:35:36 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
STYLE: Add comments, useless output printing...

Revision 13859  Directory Listing
Modified Sat Jun 19 16:48:04 2010 UTC (7 years, 3 months ago) by alexy
Original Path: trunk
ENH: models display manager: first cut

Revision 13858  Directory Listing
Modified Sat Jun 19 05:49:54 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
BUG: When Slicer is installed, CTK_QT_PLUGIN_PATH is never set. Remove the error but I doubt it fixes all the pbs.

Revision 13857  Directory Listing
Modified Fri Jun 18 17:55:55 2010 UTC (7 years, 3 months ago) by partyd
Original Path: trunk
ENH: add a simple test for numpy as an extra check if numpy built and installed correctly.

Revision 13856  Directory Listing
Modified Fri Jun 18 17:47:57 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - NUMPY - In the generated site.cfg, libraries should be listed without the "lib" prefix.

As explained in site.cfg.example, the library name without the prefix "lib" should be used.
Nevertheless, on windows, only "libf2c" leads to a successful configuration and
installation of NUMPY

Revision 13855  Directory Listing
Modified Fri Jun 18 17:47:54 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - NUMPY - Used the appropriate path separator when generating site.cfg

As explained in site.cfg.example - See http://projects.scipy.org/numpy/browser/trunk/site.cfg.example
Directories listed in variable such as library_dirs or source_dirs should be separated using os.pathsep
On windows, the separator is ";" and ":" on unix-like platform

Revision 13854  Directory Listing
Modified Fri Jun 18 17:47:51 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - CLAPACK - On linux 64bits, fixed compilation problem: relocation R_X86_64_32 against ...

See http://www.cmake.org/pipermail/cmake/2007-May/014350.html

Revision 13853  Directory Listing
Modified Fri Jun 18 16:19:59 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
ENH: qSlicer***Volumes are QObjects they need the macro Q_OBJECT

In order to have the meta system correctly working with QObjects, each
class need to declare the macro Q_OBJECT, it allows to know the final class
name of a QObject* (using QObject::metaObject()->className()).
Here it's important to know what module didn't reimplement the virtual
functions helpText() and acknowledgmentText().

Revision 13852  Directory Listing
Modified Fri Jun 18 16:19:52 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
BUG: When loading a volume (from the Data dialog), set it current

Loading a volume was not setting it current for the slice viewers.

Revision 13851  Directory Listing
Modified Fri Jun 18 15:44:09 2010 UTC (7 years, 3 months ago) by partyd
Original Path: trunk
ENH: silence output of NUMPY build step as it can cause Visual Studio to report the results of failed try compiles as errors.

Revision 13850  Directory Listing
Modified Fri Jun 18 15:35:54 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: set the list name before reading, so the node selectors are updated. Also use the file name wihtout extension so that new fids are named the same as old fids. Check return from reading and remove nodes if failed.

Revision 13849  Directory Listing
Modified Fri Jun 18 15:27:32 2010 UTC (7 years, 3 months ago) by partyd
Original Path: trunk
ENH: Fix configuration paths when building numpy in VS IDE so that it will properly find CLAPACK libraries.

Revision 13848  Directory Listing
Modified Fri Jun 18 15:26:05 2010 UTC (7 years, 3 months ago) by partyd
Original Path: trunk
ENH: required version should be the first thing in the file always.

Revision 13847  Directory Listing
Modified Fri Jun 18 15:09:58 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
BUG: Select the item "None" if qMRMLNodeComboBox::NoneEnabled is true

Revision 13846  Directory Listing
Modified Fri Jun 18 15:09:54 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
STYLE: Add comments and remove trailing whitespaces

Revision 13845  Directory Listing
Modified Fri Jun 18 15:09:50 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
ENH: Support the qMRMLSortFilterProxyModel::ShowHidden property

When ShowHidden is false, don't show the nodes that return true
to vtkMRMLNode::GetHideFromEditors()

Revision 13844  Directory Listing
Modified Fri Jun 18 14:51:24 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Revert revision 13843 - It resumes to be a wrong approach

Revision 13843  Directory Listing
Modified Fri Jun 18 14:33:39 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - On windows, CLAPACK will now be built as 64bits library if the underlying architecture is 64bits

Revision 13842  Directory Listing
Modified Fri Jun 18 14:05:14 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Fix library dirs in NUMPY_configure.cmake.in

On windows, the library are located either in Debug or Release directory.
The CMAKE_CFG_INTDIR is properly set by cmake according to the configuration
being built.

Revision 13841  Directory Listing
Modified Fri Jun 18 13:11:51 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
ENH: Set bar colors to black for the ctkVTKHistogram

Revision 13840  Directory Listing
Modified Thu Jun 17 20:40:34 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
ENH: expose the scalar range min/max in the models gui. WARNING: scalar range is ignored if you're using a color transfer function, so the FreeSurfer Green/Red and Red/Blue nodes won't display the range properly

Revision 13839  Directory Listing
Modified Thu Jun 17 08:37:57 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild -  Updateed and reviewed ctest warning exceptions

Revision 13838  Directory Listing
Modified Thu Jun 17 08:27:51 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: QTBaseLibraries and qMRMLWidgets now link against CTK_EXTERNAL_LIBRARIES

Revision 13837  Directory Listing
Modified Thu Jun 17 08:27:39 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
STYLE: Removed extra comments from Base/GUI/CMakeLists.txt

Revision 13836  Directory Listing
Modified Thu Jun 17 08:27:29 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Moved unused files from Base/GUI/Qt to Attic/Qt

Revision 13835  Directory Listing
Modified Thu Jun 17 08:27:01 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Moved unused files "Modules/GradientAnisotropicDiffusionFilter/QtGADModule*" to Attic

Revision 13834  Directory Listing
Modified Thu Jun 17 08:26:48 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
STYLE: Removed extra comments from Modules/GradientAnisotropicDiffusionFilter/CMakeLists.txt

Revision 13833  Directory Listing
Modified Thu Jun 17 08:26:37 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Removed unused Utilities/Patches/PythonQt files

Revision 13832  Directory Listing
Modified Thu Jun 17 08:26:25 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
ENH: In vtkSlicerSliceLogic - Move GetImageData and UpdateImageData method definition to Cxx file

Revision 13831  Directory Listing
Modified Thu Jun 17 03:00:44 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
COMP: Copy the Qt designer plugins in the correct location.

Revision 13830  Directory Listing
Modified Wed Jun 16 21:21:48 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
ENH: add new test that shows how to use slicer/mrml classes together with vtk and qt in standalone test

Revision 13829  Directory Listing
Modified Wed Jun 16 21:01:44 2010 UTC (7 years, 3 months ago) by fedorov
Original Path: trunk
ENH: change get method to enable access from Tcl

Revision 13828  Directory Listing
Modified Wed Jun 16 18:34:29 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
COMP: Remove warning C4250 for Visual Studio

Revision 13822  Directory Listing
Modified Wed Jun 16 14:36:12 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
STYLE: Superbuild - Added missing DEPENDS properties in External_* files

The DEPENDS property is also now consistently added as the last property
of the external project description.

Revision 13821  Directory Listing
Modified Wed Jun 16 14:36:04 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Updated External_Python26.cmake to download Python-2.6.5.tar.gz from Slicer3-lib-mirrors

Since the official release of python 2.6.5 was done March 2010, it makes
now more sens to obtain the release version as a tar.gz archive.

The official archive was mirrored from http://www.python.org/download/releases/2.6.5/
into http://svn.slicer.org/Slicer3-lib-mirrors/trunk/

Moreover, since python will now be obtained from our mirror as an archive instead
of the svn.python.org repository, dashboard results should be more
consistent and not perturbed by the down time of the python server.

Revision 13820  Directory Listing
Modified Wed Jun 16 14:36:00 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Updated External_NUMPY.cmake to download numpy-1.4.1.tar.gz from Slicer3-lib-mirrors

The official archive was mirrored from http://www.python.org/download/releases/2.6.5/http://iweb.dl.sourceforge.net/project/numpy/NumPy/1.4.1/numpy-1.4.1.tar.gz
into http://svn.slicer.org/Slicer3-lib-mirrors/trunk/

Since numpy will now be obtained from our mirror as an archive instead
of the svn.scipy.org repository, dashboard results should be more
consistent and not perturbed by the down time of the scipy server.

Revision 13819  Directory Listing
Modified Wed Jun 16 13:57:51 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: handle case where CTK_DIR is not defined

Revision 13818  Directory Listing
Modified Wed Jun 16 13:13:11 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
COMP: Fix the launcher to handle Designer plugins (Slicer and CTK plugins)

Revision 13816  Directory Listing
Modified Wed Jun 16 02:14:50 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: Added missing #ifdef to exclude function definition specific to PythonQt

Revision 13814  Directory Listing
Modified Wed Jun 16 00:58:45 2010 UTC (7 years, 3 months ago) by Yong
Original Path: trunk
BUG: GetAnnotationMeasurement is modified to return multiple measurements.
BUG: ROI annotation shows values of extensions.
BUG: warning messages are removed.
BUG: bidimensional annotation now shows two measurements.

Revision 13813  Directory Listing
Modified Tue Jun 15 23:55:22 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: Added QTGUI/qSlicerPythonManager and QTCore/qSlicerCorePythonManager

To adapt to the recent layout change in the organization of the directory,
the existing python manager class has been split into two classes.

QTCore/qSlicerPythonManager renamed into QTCore/qSlicerPythonCoreManager
and created QTGUI/qSlicerPythonManager

The new QTGUI/qSlicerPythonManager class is in charge of registering
the decorator associated with QTGUI.

Revision 13812  Directory Listing
Modified Tue Jun 15 22:01:42 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
COMP: Part5 of the trick ..

.. to make sure the directory GUIQT won't show up when using git-svn

Revision 13811  Directory Listing
Modified Tue Jun 15 21:58:45 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
COMP: Reorder the projects builds in Base

Revision 13810  Directory Listing
Modified Tue Jun 15 21:53:28 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Part4 of the trick ..

.. to make sure the directory GUIQT won't show up when using git-svn

Revision 13809  Directory Listing
Modified Tue Jun 15 21:52:07 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Part3 of the trick ..

.. to make sure the directory GUIQT won't show up when using git-svn

Revision 13808  Directory Listing
Modified Tue Jun 15 21:50:21 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
ENH: add test framework for viewer

Revision 13807  Directory Listing
Modified Tue Jun 15 21:49:03 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Part2 of the trick to make sure Base/GUIQT/Images/ doesn't show when using git-svn

Revision 13806  Directory Listing
Modified Tue Jun 15 21:47:52 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Part1 of the trick to make sure Base/GUIQT/Images/ doesn't show when using git-svn

Revision 13805  Directory Listing
Modified Tue Jun 15 19:52:33 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
COMP: Try to add dependency on qSlicerBaseQTCore for miAnnotation module

Revision 13804  Directory Listing
Modified Tue Jun 15 19:51:59 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
COMP: typo in the constructor of qSlicerAbstractModulePrivate.

Revision 13803  Directory Listing
Modified Tue Jun 15 19:17:03 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
BUG: uninitialized variable, crash in ~qSlicerAbstractModule()

Revision 13802  Directory Listing
Modified Tue Jun 15 18:58:43 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
COMP: Following the recent merge (QTBase->QtCore&QtGUI), fix comp issues

Forgot to add the add the method
qSlicerAbstractModuleWidget::showModuleAction()

Revision 13801  Directory Listing
Modified Tue Jun 15 18:12:21 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
ENH: Merge Base/QTBase with Base/QTCore

Some QtGUI dependent code was in Base/QTBase (qSlicerWidget,
qSlicerAbstractModuleWidget...) but Base/QTBase is not supposed to have
any QtGUI dependent code.
Moreover, QTBase and QTCore had no striking difference, they should be
merged.
QTBase is then moved into QtCore and QtGUI depending on the dependencies.
qSlicerAbstractModule (non gui) was depending on
qSlicerAbstractModuleWidget (gui), we created an intermediate class:
qSlicerAbstractModuleRepresentation (non gui) to remove the dependency
with GUI code. As the last class share a property with qSlicerWidget
(MRMLScene), we created a base class that contains the property.
ctkSettings is a gui class but is used in qSlicerCoreApplication, we now
handle QSettings in qSlicerCoreApplication and ctkSettings in
qSlicerApplication.

Revision 13800  Directory Listing
Modified Tue Jun 15 17:14:09 2010 UTC (7 years, 3 months ago) by clisle
Original Path: trunk
ENH: adding functionality for Summer 2010 meshing tutorial to meshing module.  Tested for leaks before uploading.  This change incorporates revisions 13784, 13785, 13799 from branches/testing/Meshing-V-3-1 branch. 

Revision 13798  Directory Listing
Modified Tue Jun 15 16:04:48 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Add an 'empty' external project in case one is provided using the _DIR variable

The project is provided using <PROJ>_DIR, nevertheless since other
project may depend on <PROJ>, let's add an 'empty' one.

That way, the dependency graph is created as "expected"

Revision 13797  Directory Listing
Modified Mon Jun 14 20:19:47 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
BUGFIX: start to init volume rendering pipeline after receiving SceneLoadEndEvent to make sure all nodes (parameters, volume property, etc) have been loaded.

Revision 13796  Directory Listing
Modified Mon Jun 14 20:01:44 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
STYLE: updating documentation for reverse list jumping, it's Control backtick instead of Shift.

Revision 13793  Directory Listing
Modified Mon Jun 14 19:35:24 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: don't use control for both linking and reversing - require use of link icon for linking

Revision 13791  Directory Listing
Modified Mon Jun 14 18:48:22 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: shrink the scope of randomly generated data set.

Revision 13790  Directory Listing
Modified Mon Jun 14 18:46:56 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: used OpenIGTLinkIF lib.

Revision 13789  Directory Listing
Modified Mon Jun 14 17:54:51 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
COMP: pass down custom git executable location (for cygwin or if newer version is installed in local dir, for instance)

Revision 13788  Directory Listing
Modified Mon Jun 14 16:39:28 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
COMP: switch to new commontk account for CTK repository

Revision 13787  Directory Listing
Modified Mon Jun 14 16:28:33 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
STYLE: start modules with Help tab closed (mimics kwwidgets behavior)

Revision 13786  Directory Listing
Modified Mon Jun 14 15:57:49 2010 UTC (7 years, 3 months ago) by taox
Original Path: trunk
BUG: keep the length of the diffusion vectors.

Revision 13783  Directory Listing
Modified Mon Jun 14 00:33:50 2010 UTC (7 years, 3 months ago) by taox
Original Path: trunk
ENH: turned on some debug output.

Revision 13782  Directory Listing
Modified Sun Jun 13 19:54:18 2010 UTC (7 years, 3 months ago) by millerjv
Original Path: trunk
BUG: merge from release 3.6 branch revision 13781 onto trunk to fix bug 861

Revision 13780  Directory Listing
Modified Sun Jun 13 18:32:09 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Possible to provide external VTK, ITK or CTK - Project name are now consistent,

At the superbuild level, it's now possible to pass ITK_DIR, CTK_DIR
or VTK_DIR/VTK_SOURCE_DIR.

The developer has to make sure the directory match the expected
configuration (wrapping, options ... )

This is useful when feature are developed locally on either CTK / VTK  / ITK
and the developer doesn't want to commit to a repository each time
he would like to see he obtain the expected behavior within slicer.

Variable name, build dir, source dir are also now identified using the same
prefix.

Revision 13779  Directory Listing
Modified Sun Jun 13 16:42:44 2010 UTC (7 years, 3 months ago) by taox
Original Path: trunk
BUG: Problem in demosaicing siemens datasets with padded blocks.

Revision 13778  Directory Listing
Modified Sun Jun 13 14:47:20 2010 UTC (7 years, 3 months ago) by taox
Original Path: trunk
BUG: using float for PET to ensure the right dynamic range -- do we need to go to double?

Revision 13776  Directory Listing
Modified Sat Jun 12 04:02:34 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
BUG: Fix relative path of save nodes was incorrect + code refactoring

Depending on what was saved first (scene or nodes) the paths were not
correctly set. To save the mrml scene, the new paths of the nodes need
to be set. To save the mrml nodes, the new path of the scene needs to
be set (so that the mrml scene use the correct saved mrml node).

Factoring of the code.
Remove trailing whitespaces

Revision 13775  Directory Listing
Modified Sat Jun 12 04:02:30 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
ENH: Volumes logic supports *.img files, add the format in qSlicerVolumesIO

Revision 13774  Directory Listing
Modified Sat Jun 12 04:02:26 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
COMP: ctkTitleComboBox has been renamed into ctkComboBox. Propagate...

Revision 13773  Directory Listing
Modified Sat Jun 12 00:22:19 2010 UTC (7 years, 3 months ago) by Yong
Original Path: trunk
BUG: Remove warning messages
BUG: errors occur when opening property dialog for fiducials
BUG: Coordinates are not shown in property dialog for Spline and Bidimensional nodes
BUG: no value shown for Bidimensional nodes

Revision 13772  Directory Listing
Modified Sat Jun 12 00:20:20 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
BUG: On windows, some environment variables were wrongly set for two reasons:
A check on vtk.exe was done to find the build type (Debug/Release...) of VTK but vtk.exe is never created with Superbuild. Now we check vtkCommon.dll that is always created
A check on Slicer3-real.exe was done to find the build type (Debug/Release) of some dlls, however when KWWidgets is OFF, Slicer3-real.exe is not created, only SlicerQT-real.exe is. The launcher also launch the application SlicerQt-real.exe by default when Slicer3-real.exe doesn't exist.

Revision 13770  Directory Listing
Modified Fri Jun 11 19:09:38 2010 UTC (7 years, 3 months ago) by tokuda
Original Path: trunk
COMP: fixing compiler warning: not all control paths return a value.

Revision 13769  Directory Listing
Modified Fri Jun 11 18:04:12 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
COMP: don't use kwwidgets macro unless kwwidgets is enabled

Revision 13768  Directory Listing
Modified Fri Jun 11 17:28:36 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Added more ctest warning exception related to Batchmake and python

Revision 13767  Directory Listing
Modified Fri Jun 11 17:28:34 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Changes python_configure_step to update LDFLAGS and CPPFLAGS with tcl directories only when required

Revision 13766  Directory Listing
Modified Fri Jun 11 17:28:31 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
ENH: Added qCTKSymbolResolver to Attic

This class was an attempt to unify resolution of symbol in
both shared object and executable in a cross platform fashion

Revision 13765  Directory Listing
Modified Fri Jun 11 17:28:27 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: qSlicerCLIModule{UIHelper, Widget} - Use Start/EndModify MRMLNode function allowing to restore node state

Revision 13764  Directory Listing
Modified Fri Jun 11 16:58:42 2010 UTC (7 years, 3 months ago) by alexy
Original Path: trunk
ENH: Remove unused color and glyph options from fiber bundle display

Revision 13762  Directory Listing
Modified Fri Jun 11 13:32:48 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: fix crashes and leaks

Revision 13760  Directory Listing
Modified Fri Jun 11 12:52:21 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: fix from Luca for python programming issue detected by Stuart

Revision 13759  Directory Listing
Modified Fri Jun 11 11:13:38 2010 UTC (7 years, 3 months ago) by pohl
Original Path: trunk
BUG: removed several small bugs as well as included BRAINS registration suite

Revision 13758  Directory Listing
Modified Fri Jun 11 01:06:38 2010 UTC (7 years, 3 months ago) by tokuda
Original Path: trunk
ENH: reslicing performance improvement by adaptive timer interval

Revision 13757  Directory Listing
Modified Fri Jun 11 00:56:18 2010 UTC (7 years, 3 months ago) by Yong
Original Path: trunk
BUG: Text Annotation cannot be moved and does not change when entering new text in the table
BUG: spline: no length shown in the table and value is not updated.
BUG: redundant text messages are removed.

Revision 13756  Directory Listing
Modified Fri Jun 11 00:55:02 2010 UTC (7 years, 3 months ago) by tokuda
Original Path: trunk
ENH: reslicing performance improvement by adaptive timer interval

Revision 13755  Directory Listing
Modified Thu Jun 10 22:11:04 2010 UTC (7 years, 3 months ago) by pohl
Original Path: trunk
BUG: Fixed generic task bug with registration

Revision 13754  Directory Listing
Modified Thu Jun 10 21:58:30 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: removing a memory leak by unregistering and deleting a class member that was forgotten in the destructor

Revision 13753  Directory Listing
Modified Thu Jun 10 21:53:26 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: check for null mrml manager before deref pointer, was causing a crash on exit

Revision 13752  Directory Listing
Modified Thu Jun 10 21:07:07 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
ENH: expose the delete temporary files option for CLIs on the command line, and put it and the redirect module streams flag into the application settings interface. For now, using the flags on the command line will not override the registry settings

Revision 13751  Directory Listing
Modified Thu Jun 10 20:53:21 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: fixed a typo in the description field. ENH: updated to produce the output as defined by the Slicer3.6 template

Revision 13750  Directory Listing
Modified Thu Jun 10 19:31:19 2010 UTC (7 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: merging from branch... making sure that new fiducial lists and fiducials are initialized with ProcessEventsOff if current mouse mode is in Persistent Place.

Revision 13749  Directory Listing
Modified Thu Jun 10 19:29:44 2010 UTC (7 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: merging from branch... making sure ViewControlGUI tracks changes to ViewNode and to the 3D Viewer's InteractorStyle.

Revision 13748  Directory Listing
Modified Thu Jun 10 19:28:06 2010 UTC (7 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: image data for generic color icon swatches

Revision 13747  Directory Listing
Modified Thu Jun 10 19:27:26 2010 UTC (7 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: merging from branch. adding infrastructure and icons for generic colors

Revision 13746  Directory Listing
Modified Thu Jun 10 19:25:47 2010 UTC (7 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: merging from branch. adding error message if cache is dirty

Revision 13745  Directory Listing
Modified Thu Jun 10 19:24:02 2010 UTC (7 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: merging from branch: added logic to see whether clear cache emptied the dir, and if not, warns user to have always-redownload checked to ensure clean loads of data.

Revision 13742  Directory Listing
Modified Thu Jun 10 17:57:11 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Addded more ctest warning exception related to Python

Revision 13741  Directory Listing
Modified Thu Jun 10 17:34:33 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: reducing memory leaks

Revision 13740  Directory Listing
Modified Thu Jun 10 17:30:34 2010 UTC (7 years, 3 months ago) by taox
Original Path: trunk
ENH: takes care of PET/SPECT which has unsigned short data type.

Revision 13739  Directory Listing
Modified Thu Jun 10 17:05:25 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: move the addition of icons to the node selector class, ensures that the icons show up as soon as the menu is populated, rather than teh previous delay until after an update from mrml. Should form a template if wish to add automatically generated icons for other node types (ie volume slice snapshots)

Revision 13737  Directory Listing
Modified Thu Jun 10 15:58:02 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
ENH: tip text for the new checkbutton.

Revision 13735  Directory Listing
Modified Thu Jun 10 15:54:07 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
BUGFIX: reconnect disconnected pipeline in debugging.

Revision 13734  Directory Listing
Modified Thu Jun 10 15:47:13 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
BUGFIX: reconnect disconnected pipeline in debugging.

Revision 13733  Directory Listing
Modified Thu Jun 10 15:43:41 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
ENH: make volume rendering module compabitle with Julien's change.

Revision 13731  Directory Listing
Modified Thu Jun 10 15:33:55 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: make widget expand with window and make more space for label name

Revision 13729  Directory Listing
Modified Thu Jun 10 15:10:30 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: for bug 792, adding new generic anatomy and generic colour nodes (latter just has names changed to numbers) and use them as file load and editor defaults

Revision 13728  Directory Listing
Modified Thu Jun 10 15:05:22 2010 UTC (7 years, 3 months ago) by tokuda
Original Path: trunk
ENH: add new features, which will be available in OpenIGTLink version 2

Revision 13727  Directory Listing
Modified Thu Jun 10 15:01:30 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: changed VTK_IGT_EXPORT to VTK_BRAINLABMODULE_EXPORT.

Revision 13726  Directory Listing
Modified Thu Jun 10 13:49:48 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
ENH: Add a checkbox to prevent using interactive framerate

Revision 13725  Directory Listing
Modified Thu Jun 10 12:00:39 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: cleaned up module logic management to avoid leaks and failed tests

Revision 13723  Directory Listing
Modified Thu Jun 10 08:31:54 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added more ctest warning exceptions


On "tar valon" dashboard, since the build directory is now cleaned, a lot
of new warnings showed up.

Revision 13722  Directory Listing
Modified Thu Jun 10 02:14:20 2010 UTC (7 years, 3 months ago) by clisle
Original Path: trunk
BUG: reverting to meshing module version 13632 to back out premature commit and remove memory leaks

Revision 13721  Directory Listing
Modified Thu Jun 10 00:35:49 2010 UTC (7 years, 3 months ago) by Yong
Original Path: trunk
BUG: add nodes/managers for ROI, Text, Bidimensional Node, and Spline
BUG: modify fiducial node and manager
BUG: modify logic and module to work with new nodes and managers

Revision 13720  Directory Listing
Modified Wed Jun 9 22:32:05 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
STYLE: Added comment line, remove extra doxygen comments, removed extra header includes

Revision 13719  Directory Listing
Modified Wed Jun 9 22:31:58 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Python26 - Remove environ hack from python_make_step and create python_environhack_step

Also fix a problem in the link command. The dylib library located in python
directory should be patched, not the one located in python-build/lib.

Revision 13717  Directory Listing
Modified Wed Jun 9 21:46:51 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: make the name of the new volume match the label name per request from Ron

Revision 13716  Directory Listing
Modified Wed Jun 9 20:58:18 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - python_make_step.cmake.in - Check if compile and linkage of environhack.o succeed

Revision 13714  Directory Listing
Modified Wed Jun 9 17:29:37 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: fixing premature commit

Revision 13713  Directory Listing
Modified Wed Jun 9 17:27:00 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: reducing memory leaks and seg faults

Revision 13712  Directory Listing
Modified Wed Jun 9 16:05:03 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: In CMakeLists.txt, downloadFile cmake helper macro will first check if the file exist

Revision 13710  Directory Listing
Modified Wed Jun 9 15:27:59 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: In vtkBrainlabModuleWin32Header, change IGT_EXPORTS into BrainlabModule_EXPORTS

That should solve the "inconsistent DLL linkage" error happening on windows.

Revision 13709  Directory Listing
Modified Wed Jun 9 14:05:28 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: turned off the install of TestData.

Revision 13708  Directory Listing
Modified Wed Jun 9 12:02:06 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
COMP: windows: copy pyconfig.h to python-build directory so it will be found next to Python.h

Revision 13705  Directory Listing
Modified Tue Jun 8 23:41:39 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH: Parameter nodes don't have descriptions, so it was printing the description of the first commandline object twice.

Revision 13704  Directory Listing
Modified Tue Jun 8 23:37:49 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - External_Python26.cmake - Build steps .. now depends on build main step

Before:
configure <- all Build_* step <- build
and
configure <- patch of pyproject.vsprops <- install

=> we weren't sure if the patching was done at the right time.

Now:
configure <- all Build_* step <- build
and
build <- patch of pyproject.vsprops <- install

Patching will always be done before the build_* steps

Revision 13703  Directory Listing
Modified Tue Jun 8 22:46:21 2010 UTC (7 years, 3 months ago) by fedorov
Original Path: trunk
ENH: added parsing of the default values, newlines between parameter groups,
command line parameter checking

Revision 13702  Directory Listing
Modified Tue Jun 8 22:37:04 2010 UTC (7 years, 3 months ago) by fedorov
Original Path: trunk
STYLE: remove newline in one parameter description (breaks sem2wiki
formatting)

Revision 13701  Directory Listing
Modified Tue Jun 8 22:13:27 2010 UTC (7 years, 3 months ago) by fedorov
Original Path: trunk
ENH: added a script from Hans Johnson to convert xml description of a command
line module into a wiki documentation page

Revision 13700  Directory Listing
Modified Tue Jun 8 22:00:16 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
ENH: ModuleWizard.py and ModuleTemplate for creating Qt-loadable modules as starting point for custom development

Revision 13699  Directory Listing
Modified Tue Jun 8 19:52:01 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - External_Python26 - Use CMAKE_BUILD_TOOL instead of DEVENV

Revision 13697  Directory Listing
Modified Tue Jun 8 18:40:28 2010 UTC (7 years, 3 months ago) by alexy
Original Path: trunk
ENH: changed fiducial seeding to tubes by default

Revision 13696  Directory Listing
Modified Tue Jun 8 17:58:22 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Remove extra line in External_Python26.cmake

Revision 13695  Directory Listing
Modified Tue Jun 8 17:56:42 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - In External_Python26.cmake, make sure no target relying on DEVENV are run in parallel

Revision 13694  Directory Listing
Modified Tue Jun 8 17:42:24 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Review order of dependency in External_Python26.cmake

Revision 13693  Directory Listing
Modified Tue Jun 8 17:38:35 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Fix dependency problem in External_Python26.cmake

Also using an help function: build_python_target allowing
to make the code more readable and clear.

Revision 13692  Directory Listing
Modified Tue Jun 8 17:12:38 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Review dependencies and clean code

-> removed unused External_BLAS.cmake
-> BLAS is provided by CLAPACK

-> Note also that Blt, iwidgets and itcl are build only on linux

Revision 13691  Directory Listing
Modified Tue Jun 8 16:25:50 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: porting the change from the 3.6 branch to turn off managing the cursor (still get the hand, but only when can move the fiducial now)

Revision 13689  Directory Listing
Modified Tue Jun 8 15:28:45 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Fix typo in CMakeLists.txt - itcl instead of incrTcl

Revision 13688  Directory Listing
Modified Tue Jun 8 15:16:11 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: BrainlabModule will be in the nightly build from now on.

Revision 13687  Directory Listing
Modified Tue Jun 8 15:12:09 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: turned on Slice Intersections when navigation is on.

Revision 13686  Directory Listing
Modified Tue Jun 8 14:29:12 2010 UTC (7 years, 3 months ago) by tokuda
Original Path: trunk
ENH: switching OpenIGTLink Library from 1.0 branch to trunk

Revision 13685  Directory Listing
Modified Tue Jun 8 12:43:46 2010 UTC (7 years, 3 months ago) by lassoan
Original Path: trunk
COMP: Fixed compilation error (when CMake was not re-built, then tcl-build directory was created in Slicer3 directory instead of Slicer3-lib)

Revision 13682  Directory Listing
Modified Tue Jun 8 12:32:06 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
COMP: rearrange code to avoid compile warning

Revision 13681  Directory Listing
Modified Tue Jun 8 11:19:49 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Copied ctest warning exception from Superbuild/CtestCustom.cmake.in to CtestCustom.cmake.in

Revision 13680  Directory Listing
Modified Tue Jun 8 11:15:40 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added ctest warning exception related to CTL/log4qt

Revision 13679  Directory Listing
Modified Tue Jun 8 10:58:38 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added blt incrTcl and iwidgets as dependency of Slicer target

Revision 13678  Directory Listing
Modified Tue Jun 8 10:58:34 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added ctest warning exception related to Visual

Since NUMPY has test that return build errors,
let's add the following exception: "WARNING non-zero return value in ctest from"

Revision 13677  Directory Listing
Modified Tue Jun 8 05:09:59 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
ENH: Add histogram widget into the Volume module panel: qSlicerScalarVolumeDisplayWidget

Revision 13676  Directory Listing
Modified Mon Jun 7 22:47:50 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:  Merged changes with release 3-6 branch.

Revision 13675  Directory Listing
Modified Mon Jun 7 21:20:39 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
BUG: qSlicerSaveDataDialog was always adding ".mrml" to the scene URL name
Sometimes the URL of the scene contains the extension .mrml -> don't add another extension to it.

Revision 13674  Directory Listing
Modified Mon Jun 7 19:59:31 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added ctest custom warning for CTK/log4qt on Mac

Revision 13673  Directory Listing
Modified Mon Jun 7 19:56:42 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added ctest custom warning for CTK/log4qt

Revision 13672  Directory Listing
Modified Mon Jun 7 19:15:08 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: port color file loading fix from branch

Revision 13671  Directory Listing
Modified Mon Jun 7 18:48:30 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Updated External_CLAPACK.cmake to use the archive now available on Slicer3-lib-mirrors

Since the netlib.org server has been down several time, especially when the nightly dashboard
tarted, we added a copy of the archive to slicer3 lib mirrors.

Revision 13669  Directory Listing
Modified Mon Jun 7 17:58:49 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: Libs/MRML/CMakeLists.txt - Fix warning related to missing Libs/VTK dir

Since VTK isn't included in Slicer3/Libs, removed it from packages variable.

That should fix the following warning:
 -L: directory name (/.../Slicer3-bin/Slicer3-build/Libs/VTK) does not exist

See http://www.cdash.org/CDash/viewBuildError.php?type=1&buildid=628240

Revision 13667  Directory Listing
Modified Mon Jun 7 12:56:36 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: merge fix from 3.6 branch to make external progress window go away if slicer crashes

Revision 13665  Directory Listing
Modified Mon Jun 7 03:35:57 2010 UTC (7 years, 3 months ago) by alexy
Original Path: trunk
ENH: changed TractographySeeding module to send to Fiberbundle module for display property

Revision 13663  Directory Listing
Modified Mon Jun 7 02:18:50 2010 UTC (7 years, 3 months ago) by clisle
Original Path: trunk
ENH: working MRML integration with IA-FEMesh datatypes. Snapshot of changes still in progress. 

Revision 13662  Directory Listing
Modified Sun Jun 6 16:26:09 2010 UTC (7 years, 3 months ago) by alexy
Original Path: trunk
ENH: added back qt Volumes module

Revision 13661  Directory Listing
Modified Sun Jun 6 15:23:34 2010 UTC (7 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: triggering InteractionModeChangedEvent after scene loads to update the Interaction Node

Revision 13660  Directory Listing
Modified Sun Jun 6 15:22:06 2010 UTC (7 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: merging changes to fiducial pick/place and mouse modes from 3-6 branch into trunk.

Revision 13659  Directory Listing
Modified Sun Jun 6 04:46:08 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added more ctest warning exception specific to Tiger plarform

Revision 13658  Directory Listing
Modified Sun Jun 6 04:46:05 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: Change signature of qSlicerModuleFactoryManagerTest1 main

To fix the following error:
error LNK2001: unresolved external symbol "int __cdecl qSlicerModuleFactoryManagerTest1(int,char * * const)

Changed from
  myTest(int argc, char ** argv)
to
  myTest(int argc, char* argv[])

Revision 13657  Directory Listing
Modified Sun Jun 6 04:46:01 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: Added missing virtual destructor in qSlicerIOOptions and few qMRML classes

Revision 13656  Directory Listing
Modified Sun Jun 6 04:45:57 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: QTCLI - Added virtual destructor to WidgetValueWrapper

That will fix the warning:
warning: 'class<unnamed>::RegionWidgetValueWrapper' has virtual functions but non-virtual destructor

Revision 13655  Directory Listing
Modified Sun Jun 6 02:23:50 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
BUGFIX: multi-volume rendering now listen to lighting property changes.

Revision 13652  Directory Listing
Modified Sat Jun 5 14:44:28 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: re-enable auto window/level calculation for int-like types

Revision 13651  Directory Listing
Modified Sat Jun 5 06:51:20 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
ENH: qSlicerSaveDataDialog now saves mrml scenes and nodes

Revision 13650  Directory Listing
Modified Sat Jun 5 06:51:17 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
ENH: qSlicerCoreIOManager: Check if a file can be loaded by a reader before trying to load it

Revision 13649  Directory Listing
Modified Sat Jun 5 06:51:13 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
BUG: qSlicerSlicer3SceneReader had an inverted assert test

Revision 13648  Directory Listing
Modified Sat Jun 5 01:42:51 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
BUGFIX: fixed freezing when using multi-volume rendering for PET-CT visualization

Revision 13646  Directory Listing
Modified Fri Jun 4 22:53:09 2010 UTC (7 years, 3 months ago) by fedorov
Original Path: trunk
BUG: the name of the registration module has changed

Revision 13645  Directory Listing
Modified Fri Jun 4 22:21:30 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
ENH: reduce overhead for reslicing driven by OpenIGTLink

Revision 13644  Directory Listing
Modified Fri Jun 4 22:20:57 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
BUG: Fix vtkSlicermiAnnotationModuleLogicTest1

Revision 13643  Directory Listing
Modified Fri Jun 4 22:20:49 2010 UTC (7 years, 3 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: remove the Volumes and Measurements modules from the Slicer build with Qt.

Revision 13642  Directory Listing
Modified Fri Jun 4 21:24:05 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
BUGFIX: incorrect widget called.

Revision 13641  Directory Listing
Modified Fri Jun 4 21:08:29 2010 UTC (7 years, 3 months ago) by pohl
Original Path: trunk
BUG: Packed version did not correctly tcl files

Revision 13640  Directory Listing
Modified Fri Jun 4 19:24:52 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
ENH: add an API to lock the 2d rulers

Revision 13638  Directory Listing
Modified Fri Jun 4 18:30:32 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: used Four-up layout with BrainlabModule.

Revision 13636  Directory Listing
Modified Fri Jun 4 17:56:56 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: avoid running vtkImageBimodalAnalysis on non-INT datatypes - always use ad hoc method to guess window/level

Revision 13634  Directory Listing
Modified Fri Jun 4 15:20:59 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Refine ctest warning exception

Revision 13628  Directory Listing
Modified Fri Jun 4 14:53:33 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: qMRMLSceneFactoryWidget::generateNode is more robust

The method now regenerate a classNumber if the obtained node has
a singeltonTag set to True.

That fixes test qMRMLSceneFactoryWidgetTest1

Revision 13627  Directory Listing
Modified Fri Jun 4 14:47:14 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
ENH: removed debugging printf statement.

Revision 13625  Directory Listing
Modified Fri Jun 4 04:23:37 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: Fix test qSlicerModuleFactoryManagerTest1

Due to the fact the qSlicerModlesIO and qSlicerScalarOverlayIO are
registered within the registerItems method, qSlicerCoreApplication is
expected to be instanciated.

Also updated qSlicerCoreModuleFactory::registerItems method, now make sure
qSlicerCoreApplication is instanciated

Signed-off-by: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com>

Revision 13624  Directory Listing
Modified Fri Jun 4 02:47:43 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:  Made labels shorter so that they render bettter in the image.

Revision 13623  Directory Listing
Modified Fri Jun 4 02:44:15 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
ENH: Test vtkSlicermiAnnotationModuleLogicTest1 - Improve output in case of error

Indeed the test was failing without indicating the reason !

Revision 13621  Directory Listing
Modified Fri Jun 4 02:31:19 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: EMSegment/Graph/vtkImageGraph - Fix uninitialized variable warnings

Revision 13620  Directory Listing
Modified Fri Jun 4 02:26:43 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: QTModules/miAnnotation - Fix uninitialized variable warnings

Revision 13619  Directory Listing
Modified Fri Jun 4 02:26:37 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: Fix memory leak in qSlicermiAnnotationModuleAnnotationPropertyDialogTest1

Use of vtkSmartPointer solved the problem

Revision 13616  Directory Listing
Modified Thu Jun 3 21:33:10 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: fixes to Editor in response to Sonia's testing - better handling of multiple structures with similar names (appended numbers), improved tooltips, ability to select same coloe as previous choice and other small tweaks

Revision 13615  Directory Listing
Modified Thu Jun 3 20:52:50 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - option Slicer3_USE_QT is now passed to inner project Slicer3

Revision 13613  Directory Listing
Modified Thu Jun 3 18:08:00 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
BUG:  BRAINSResample output image image was set to file instead of image.

Revision 13612  Directory Listing
Modified Thu Jun 3 17:42:04 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
ENH: set ROI slider resolution approporiately

Revision 13611  Directory Listing
Modified Thu Jun 3 17:40:38 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
BUGFIX: connect ignored SetResolution function call.

Revision 13610  Directory Listing
Modified Thu Jun 3 16:53:20 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
ENH: allow user to apply bg volume property to fg volume when doing volume comparison.

Revision 13609  Directory Listing
Modified Thu Jun 3 16:12:37 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added more warning exception to CTestCustom.cmake.in

Revision 13608  Directory Listing
Modified Thu Jun 3 15:49:23 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:  Improved code coverage by removing duplicate, or oudated functions taht are no longer needed.

Revision 13607  Directory Listing
Modified Thu Jun 3 15:01:59 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
ENH: Removed obsolete EMSegmentCommandLine_GUIVersion command line application

Following email of Killian - 06/03/2010

Revision 13606  Directory Listing
Modified Thu Jun 3 07:51:25 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Remove unused External_{LAPACK, NumPy.old}.cmake files

Also change mode of few cmake scrips

Revision 13605  Directory Listing
Modified Thu Jun 3 07:51:20 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Disable update step for Teem project

Since teem external project is checked out using a svn url specifying a tag,
update_command is set to an empty string.

Revision 13604  Directory Listing
Modified Thu Jun 3 07:51:17 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Disable update step for ITK and KWWidgets project

Since ITK and KWWidgets external projects are using a CVS Tag,
update_command doesn't make sens and is set to an empty string.

Revision 13603  Directory Listing
Modified Thu Jun 3 07:04:41 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added ctest warning exception for python / Mac

---
/usr/bin/ranlib: file: libpython2.6.a(pymath.o) has no symbols
---

See http://www.cdash.org/CDash/viewBuildError.php?type=1&buildid=624885

Revision 13602  Directory Listing
Modified Thu Jun 3 07:01:05 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Add ctest warning exception specific to Mac / VTK / X11

----
/usr/X11R6/include/GL/gl.h:1402:1: warning: "GL_GLEXT_LEGACY" redefined
In file included from /.../bin/VTK-build/Rendering/vtkgl.h:22,
                 from /.../bin/VTK/Rendering/vtkColorMaterialHelper.cxx:22:

/.../bin/VTK/Rendering/vtkOpenGL.h:21:1: warning: this is the location of the previous definition
----

See http://www.cdash.org/CDash/viewBuildError.php?type=1&buildid=624885

Revision 13601  Directory Listing
Modified Thu Jun 3 06:54:18 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Fix SVN revision of NUMPY external project

Following the HEAD was causing problem - Still working toward
a green dashboard, the commit 8455 broke it.

For know, let's fix it to the last know compiling revision: 8454

Revision 13600  Directory Listing
Modified Thu Jun 3 06:54:15 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Simplify External_Python26.cmake and fixed revision number

Until now - we were using python/trunk.

By fixing the revision to 81659, we will
 - avoid to configure/build python each time the project is build at the top level
 - make debugging of python code easier and revision independent

Revision 13599  Directory Listing
Modified Thu Jun 3 00:17:08 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: change behavior to be consistent with superclass

Revision 13598  Directory Listing
Modified Wed Jun 2 21:57:50 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
STYLE: improve formatting of status output

Revision 13597  Directory Listing
Modified Wed Jun 2 21:55:01 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Move numpy ctest exception from warning to error

Revision 13596  Directory Listing
Modified Wed Jun 2 19:58:10 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 13595  Directory Listing
Modified Wed Jun 2 19:27:55 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Add numpy exception to CTEST_CUSTOM_WARNING_EXCEPTION

See http://www.cdash.org/CDash/viewBuildError.php?buildid=624426

Revision 13594  Directory Listing
Modified Wed Jun 2 18:28:35 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:  Added feature to BRAINSResample that allows grid lines to be created in the image.  ENH:  Made test cases more tolerant of slight image difference due to numerical precision.

Revision 13593  Directory Listing
Modified Wed Jun 2 16:33:26 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: need to keep a copy of the pointer to the transform node so that observers can be removed from it - previous code would slow down because multiple oberservers where triggered every time the transform changed leading to much dupicated effort

Revision 13592  Directory Listing
Modified Wed Jun 2 16:31:12 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
ENH: Distance Color Blending parameter setting.

Revision 13590  Directory Listing
Modified Wed Jun 2 15:49:49 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added a PLATFORM_CHECK flag

By default, it's set to TRUE

As of today, the check only ensure that MAC OSX >= 10.4 is used

Revision 13589  Directory Listing
Modified Wed Jun 2 15:49:46 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Update the check of qt version on Apple

Only Snowleopard requires Qt 4.7

See http://doc.trolltech.com/4.6-snapshot/developing-on-mac.html

For Mac OS X 10.6, Apple has started recommending developers to build
their applications 64-bit. The main reason is that there is a small
speed increase due to the extra registers on Intel CPU's, all their
machine offerings have been 64-bit since 2007, and there is a cost
for reading all the 32-bit libraries into memory if everything
else is 64-bit. If you want to follow this advice, there is only
one choice, 64-bit Cocoa.

Revision 13588  Directory Listing
Modified Wed Jun 2 15:49:40 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added itk "Utilities.itktiff" exception and also fix a typo error

Revision 13587  Directory Listing
Modified Wed Jun 2 05:50:18 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added ctest warning exception specific to vtkCarbonRenderWindow

Revision 13586  Directory Listing
Modified Wed Jun 2 05:24:52 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added more exception to CTEST_CUSTOM_WARNING_EXCEPTION

Added exceptions for the following projects: Numpy, blt, incrTcl, Tk

Revision 13585  Directory Listing
Modified Wed Jun 2 02:51:53 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
BUG: fixed Slicer crash due to threading.

Revision 13584  Directory Listing
Modified Wed Jun 2 00:21:17 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - On Apple, if leopard or snowleopard, make sure qt >= 4.7 is used

Revision 13583  Directory Listing
Modified Tue Jun 1 20:09:47 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: bring the 2d fiducials to match the 3d ones wrt locking when placing

Revision 13581  Directory Listing
Modified Tue Jun 1 19:51:50 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Update External_Python26.cmake - Removed --with-tcl unrecognized option + fix compilation problem related to relocation R_X86_64_32

1) --with-tcl wasn't a valid option recognized by the python configure script
2) On unix like platform, now set LD_LIBRARY_PATH, LDFLAGS, CPPFLAGS and CXX properly when configuring python.
3) On unix 64bits machine, added -fPIC cflags when configuring blt, tcl and tk libraries.

Revision 13580  Directory Listing
Modified Tue Jun 1 19:51:46 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Refine CTEST_CUSTOM_WARNING_EXCEPTION regular expression

Also removed extra comments

Revision 13577  Directory Listing
Modified Tue Jun 1 17:52:10 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: correctly specify OS version during test

Revision 13575  Directory Listing
Modified Tue Jun 1 15:20:03 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Simplify regular expression reported in CTestCustom.cmake.in

Revision 13574  Directory Listing
Modified Tue Jun 1 15:10:45 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Fix typo error in CTestCustom.cmake.in

Revision 13573  Directory Listing
Modified Tue Jun 1 11:59:55 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
COMP: disable python for non-XP builds

Revision 13572  Directory Listing
Modified Tue Jun 1 03:51:46 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Add more exception to CTEST_CUSTOM_WARNING_EXCEPTION

Revision 13571  Directory Listing
Modified Tue Jun 1 02:33:01 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:  Fixed failing test cases by making separate baseline images.

Revision 13570  Directory Listing
Modified Mon May 31 17:00:11 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Add more exception to CTEST_CUSTOM_WARNING_EXCEPTION

Revision 13569  Directory Listing
Modified Mon May 31 16:54:21 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Add more exception to CTEST_CUSTOM_WARNING_EXCEPTION

Revision 13568  Directory Listing
Modified Mon May 31 15:42:38 2010 UTC (7 years, 3 months ago) by partyd
Original Path: trunk
ENH: more warning supression.

Revision 13567  Directory Listing
Modified Sun May 30 21:57:31 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Updated CTEST_CUSTOM_WARNING_EXCEPTION and removed auto-generated list of exception

Exception shouldn't be auto-generated. These ones should be added case
by case and widely documented.

Revision 13566  Directory Listing
Modified Sun May 30 16:56:58 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:
In response to numerous constructive critisms of the newly added suite of BRAINSTools, a code review was performed in order to make the applications work consistenently and with similar user interfaces.

Summary of ChangeLog:
-Instrumented xml files so that moving images are properly associated with their transforms in the Slicer3 MRML Interface.
-Made command line arguments consistent across tools for specifying images, transforms, similar parameters.
-Hid many advanced command line arguments from standard user interface when used from Slicer3
-Improved documentation of command line arguments to describe better what the intended purpose, and restrictions on use are.
-Added common set of image resample/warping options across all tools so that all tools provide common interface for choosing outputPixelType and interpolation mode
-Fixed reading and writing of transforms to use a common read/write paradigm, to be consistent across all tools, and to be compatible with Slicer3 (i.e. Write out Bspline transforms with the bulk transform given second).
-Increased code coverage by merging common functionality that existed in each tool separately into the BRAINSCommonLIb, thus removing code, and ensuring that exactly the same behavior was done across all tools.
-Worked around bug where ITK LSBFGSB optimizer does not properly return the number of iterations performed,  This improperly reported that Bspline registrations were never done when doing a Bspline registration alone.
-Improved source code documentation for commonly used functions.


Revision 13565  Directory Listing
Modified Sat May 29 08:13:52 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added more ctest custom warning exceptions

Revision 13564  Directory Listing
Modified Sat May 29 07:49:16 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added more ctest custom warning exceptions

Revision 13563  Directory Listing
Modified Sat May 29 07:49:09 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Change macro downloadFile into function - Check also if downloaded file exists

Revision 13562  Directory Listing
Modified Sat May 29 05:20:20 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added numpy configtest related errors to CTEST_CUSTOM_ERROR_EXCEPTIONCTEST_

Revision 13561  Directory Listing
Modified Sat May 29 00:16:04 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - External_NUMPY - Reorganize code

Revision 13560  Directory Listing
Modified Sat May 29 00:16:00 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added missing step to External_Python26.cmake

Revision 13558  Directory Listing
Modified Fri May 28 21:57:06 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Rename External_NumPy.cmake into External_NumPy.old.cmake

Since on windows, filename are not case sensitive, it was causing problem.

Revision 13557  Directory Listing
Modified Fri May 28 21:25:21 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Integrated NUMPY depending on CLAPACK

It remove the dependency on Fortran compiler

Revision 13556  Directory Listing
Modified Fri May 28 21:18:37 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Python dependencies are now all set in CMakeLists.txt

Revision 13555  Directory Listing
Modified Fri May 28 21:18:34 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
STYLE: SuperBuild/External_Python26.cmake - Fix indent and remove extra spaces

Revision 13554  Directory Listing
Modified Fri May 28 20:03:13 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
BUG: fixed a bug to display network connection status.

Revision 13553  Directory Listing
Modified Fri May 28 19:35:16 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
ENH: New feature: Distance Color Blending (for helping to display depth information) in MIP rendering

Revision 13552  Directory Listing
Modified Fri May 28 19:01:37 2010 UTC (7 years, 3 months ago) by millerjv
Original Path: trunk
BUG: roll back optimization introduced in r13144 as it causes scenes that use the compare to not load poperly (the slice controller do not get wired to the slice nodes properly if the optization is used)

Revision 13550  Directory Listing
Modified Fri May 28 18:09:07 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Custom warning exception for external project are now auto-generated

Revision 13549  Directory Listing
Modified Fri May 28 17:41:13 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: after loading an MRML scene automatically switch to next step.

Revision 13548  Directory Listing
Modified Fri May 28 16:50:57 2010 UTC (7 years, 3 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding balloon help which was missing.

Revision 13547  Directory Listing
Modified Fri May 28 16:41:22 2010 UTC (7 years, 3 months ago) by alexy
Original Path: trunk
BUG_FIXED: don't update references while closing the scene. May cause crash if widgets still observing nodes.

Revision 13544  Directory Listing
Modified Fri May 28 15:14:53 2010 UTC (7 years, 3 months ago) by millerjv
Original Path: trunk
BUG: restore of navigation mode from MRML file

Revision 13543  Directory Listing
Modified Fri May 28 15:07:49 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: tweaking help text.

Revision 13540  Directory Listing
Modified Fri May 28 12:42:46 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
STYLE: merge from 3.6 branch

Revision 13538  Directory Listing
Modified Fri May 28 12:28:43 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
STYLE: merge from 3.6 branch

Revision 13536  Directory Listing
Modified Thu May 27 21:09:54 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
ENH: print warning and continue if launching an external program in a directory that does not include a bin/Slicer3-real executable

Revision 13535  Directory Listing
Modified Thu May 27 21:02:41 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Improve readability, update code layout, add comment

Revision 13534  Directory Listing
Modified Thu May 27 21:02:38 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Update Qt version checking mechanism - Require Qt >= 4.6.2

Revision 13533  Directory Listing
Modified Thu May 27 21:02:34 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Review policy to set vtk_PYTHON_ARGS - Force VTK_USE_TK to Off if Slicer3_USE_QT is ON

When configuring external project, use PYTHON_INCLUDE_DIR instead of
the deprecated PYTHON_INCLUDE_PATH

Revision 13531  Directory Listing
Modified Thu May 27 19:54:53 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Added code to dump external project dependencies into a file

The file ExternalProjectDependencies.txt will now be created and contain
the external project dependencies as described below:

proj1:
proj2:
proj3: proj1;proj2
proj4:proj1

Revision 13530  Directory Listing
Modified Thu May 27 19:54:50 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Reorganized code, remove unused variable, updated comment

Revision 13529  Directory Listing
Modified Thu May 27 19:54:47 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - CMake Policy are now set in more readable way

Revision 13528  Directory Listing
Modified Thu May 27 19:54:44 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Move the setting of vtk_PYTHON_ARGS from External_Python26.cmake to External_VTK.cmake

When configuring Slicer, now use directly:
  -DPYTHON_INCLUDE_PATH:PATH=${slicer_PYTHON_INCLUDE}
  -DPYTHON_LIBRARY:FILEPATH=${slicer_PYTHON_LIBRARY}

instead of vtk_PYTHON_ARGS

Revision 13527  Directory Listing
Modified Thu May 27 19:54:41 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
STYLE: Fix indent in QTModules/miAnnotation/Testing/CMakeLists.txt

Revision 13526  Directory Listing
Modified Thu May 27 19:51:44 2010 UTC (7 years, 3 months ago) by millerjv
Original Path: trunk
ENH: adding warp field output (not tested yet)

Revision 13525  Directory Listing
Modified Thu May 27 18:32:23 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: unify RequestRender processing and avoid warnings if renderer is deleted while idle process render request is still pending

Revision 13524  Directory Listing
Modified Thu May 27 18:14:17 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
STYLE: fix indentations

Revision 13523  Directory Listing
Modified Thu May 27 17:35:17 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
COMP: switch to vtk 5.6 git mirror as described in post to slicer-devel

Revision 13521  Directory Listing
Modified Thu May 27 16:42:16 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
COMP: avoid namespace problem for B0 and ECHO which appear in both python and teem

Revision 13519  Directory Listing
Modified Thu May 27 16:34:50 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: set scene IsClosed flag while clearing the scene also check this flag and don't update node references while scene is closing

Revision 13518  Directory Listing
Modified Thu May 27 16:33:04 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: fix null pointer - need to figure out why there is a NULL display node in the list - is that normal?

Revision 13517  Directory Listing
Modified Thu May 27 16:26:01 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:  Added proper documentation pages to headers.

Revision 13515  Directory Listing
Modified Thu May 27 16:20:02 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:  Fixed documentation to point ot proper directory.

Revision 13513  Directory Listing
Modified Thu May 27 13:52:06 2010 UTC (7 years, 3 months ago) by tokuda
Original Path: trunk
COMP: adding variables in CMakeLists.txt for OpenCV library

Revision 13512  Directory Listing
Modified Thu May 27 12:45:25 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
COMP: fix windows compilation by making method signatures match implementation

Revision 13511  Directory Listing
Modified Wed May 26 22:05:13 2010 UTC (7 years, 3 months ago) by partyd
Original Path: trunk
BUG: on VS10 if you give a step an empty string it will generate a step for you (configure in this case). Then it will complain that there is no CMakeLists.txt file in the tcl source dir. In VS10 this will appears as a build error (not the case in VS9). So instead of passing empty commands and pass no-op echo commands so that a configure step isn't generated.

Revision 13510  Directory Listing
Modified Wed May 26 20:37:03 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
ENH: provide a lock/unlock API that can be called to turn processing of events on or off for all rulers and angles

Revision 13509  Directory Listing
Modified Wed May 26 20:06:40 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Review options supported by superbuild

Also update External_VTK.cmake to properly configure VTK on MAC

Revision 13508  Directory Listing
Modified Wed May 26 18:31:24 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: porting fix for bug 850 from 3.6 branch, set the full path on the file list members on reading in from xml

Revision 13506  Directory Listing
Modified Wed May 26 15:27:24 2010 UTC (7 years, 3 months ago) by partyd
Original Path: trunk
COMP: -1 is a bogus argument, setting to 10000.

Revision 13505  Directory Listing
Modified Wed May 26 13:37:49 2010 UTC (7 years, 3 months ago) by tokuda
Original Path: trunk
COMP: Change slicer_variables.tcl/Scripts/genlib.tcl to use OpenCV 2.1. (default OFF)

Revision 13503  Directory Listing
Modified Wed May 26 12:18:57 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:  Reset baseline images to represent the algorithm in the new state.  Results have been validated with visual inspection as being virtually identical to the previous cases, but the recent improvements have slightly changed the behavior at the very edges of the images.

Revision 13502  Directory Listing
Modified Wed May 26 12:15:03 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: check for missing data when formating tensor text string

Revision 13501  Directory Listing
Modified Wed May 26 12:01:36 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: merge fixes from 3.6 release branch for annotation updates  and label string formating for empty pixel values

Revision 13500  Directory Listing
Modified Wed May 26 11:58:47 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:  Needed new reference data set after small algorithmic change was made.

Revision 13498  Directory Listing
Modified Wed May 26 02:47:29 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:  Many code cleanups and simplificaitons to make the maintenance much easier over time.  Added requested features.

Revision 13497  Directory Listing
Modified Wed May 26 01:57:57 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Fix QTCore/Testing/CMakeLists.txt - QTcore_TESTS was used instead of KIT_TESTS

Revision 13496  Directory Listing
Modified Tue May 25 23:27:10 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Fix GenerateGenerateLMConfig.cmake to make use of GenerateLMLauncher on non windows platform

That should fix error similar to this one:
dyld: Library not loaded: libitksys.3.18.dylib
  Referenced from: .../Slicer3-bin/Slicer3-build/Modules/Tractography/FiducialSeeding/../../../bin/GenerateLM
  Reason: image not found

Revision 13495  Directory Listing
Modified Tue May 25 22:47:49 2010 UTC (7 years, 3 months ago) by tokuda
Original Path: trunk
BUG: Fix registration error due to modification in newmat/ZLinAlg.cxx

Revision 13494  Directory Listing
Modified Tue May 25 22:37:55 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Fix GenerateGenerateCLPConfig.cmake to make use of GenerateCLPLauncher on non windows platform

That should fix the problem happening on mac:
dyld: Library not loaded: libitksys.3.18.dylib
  Referenced from: .../Slicer3-build/Libs/SlicerExecutionModel/GenerateCLP/Testing/../../../../bin/GenerateCLP
  Reason: image not found

Revision 13493  Directory Listing
Modified Tue May 25 21:57:01 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Fix Application/CLI/Java/CMakeLists.txt to work with CMake < 2.8.1

Revision 13492  Directory Listing
Modified Tue May 25 21:21:24 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
STYLE: Remove extra debug statement from Superbuild/CMakelists.txt

Revision 13491  Directory Listing
Modified Tue May 25 21:18:50 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild / Python26 / Apple - Port hack from genlib script to External_Python26.cmake

This will fix the link error: undefined symbol: _environ
happening when ModuleDescriptionParser was compiled.

Revision 13490  Directory Listing
Modified Tue May 25 21:13:04 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: make the java not found a status message for now, there's an issue finding Java_JAVAC_EXECUTABLE where JAVA_RUNTIME was succeeding

Revision 13489  Directory Listing
Modified Tue May 25 19:52:52 2010 UTC (7 years, 3 months ago) by alexy
Original Path: trunk
ENH: fixed help link

Revision 13486  Directory Listing
Modified Tue May 25 19:36:39 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: when installed the extension TclSampleScriptedModule was getting errors on exit because the gui and logic were not defined.

Revision 13484  Directory Listing
Modified Tue May 25 19:35:48 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: check for null pointers, was getting a crash on exit

Revision 13481  Directory Listing
Modified Tue May 25 19:12:54 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: check for the case where the module name is less than 7 characters long. Bug 852

Revision 13480  Directory Listing
Modified Tue May 25 17:49:37 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Fix QTModules/miAnnotation/Testing/CMakeLists.txt - CMAKE_BUILD_TYPE shouldn't be hardcoded !

Revision 13476  Directory Listing
Modified Tue May 25 15:09:07 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
BUG: Fix CTK path in launcher.tcl.in

Since CTK is also build as a "superbuild", make sure that the inner
directory is also appended.

Revision 13475  Directory Listing
Modified Tue May 25 15:09:04 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
ENH: Added convenient function LogToFile to launch.tcl

This function allow to log any string to a file named launcher-log.txt
Could be very useful while debugging the launcher.

Revision 13474  Directory Listing
Modified Tue May 25 11:49:53 2010 UTC (7 years, 3 months ago) by pieper
Original Path: trunk
BUG: merge fix from trunk - update annotation in seeds

Revision 13472  Directory Listing
Modified Tue May 25 00:18:38 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Update application/CLI/Java/CMakeLists.txt to display a warning if Javac is not installed

If Javac wasn't installed, project(JavaExamples Java ) was throwing an error

Also update the script to use the variables:
 Java_JAVA_EXECUTABLE, Java_JAVAC_EXECUTABLE and Java_JAR_EXECUTABLE

instead of the deprecated:
  JAVA_RUNTIME, JAVA_COMPILE and JAVA_ARCHIVE

Revision 13471  Directory Listing
Modified Mon May 24 23:44:32 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Launcher.tcl is now configured with CTK path(s)

Revision 13470  Directory Listing
Modified Mon May 24 23:29:24 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Move CMake/CTestCustom.cmake.in into Superbuild directory

Revision 13469  Directory Listing
Modified Mon May 24 23:29:20 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Set the number of reported warning to -1 (unlimited)

Revision 13468  Directory Listing
Modified Mon May 24 23:29:17 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Slicer3_PYTHON is now ON by default

Revision 13467  Directory Listing
Modified Mon May 24 23:29:14 2010 UTC (7 years, 3 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - On linux, Tk is now a dependency of VTK

Revision 13465  Directory Listing
Modified Mon May 24 21:55:32 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
ENH: use testing macro, test the set/get macros, adding boolean macros. ROIMin/Max could use some range checking, but the test passes as is.

Revision 13464  Directory Listing
Modified Mon May 24 20:28:35 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
ENH: add a test

Revision 13463  Directory Listing
Modified Mon May 24 20:11:08 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
COMP:  Removed unnecessary dependancy on the math library.

Revision 13462  Directory Listing
Modified Mon May 24 19:22:59 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
COMP: fix compiler warnings/errors, unused var, return vals

Revision 13461  Directory Listing
Modified Mon May 24 18:04:41 2010 UTC (7 years, 3 months ago) by naucoin
Original Path: trunk
BUG: install the merge models, make a library for it. Try exposing the java directory

Revision 13460  Directory Listing
Modified Mon May 24 17:55:25 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: improved the help text.

Revision 13459  Directory Listing
Modified Mon May 24 17:55:06 2010 UTC (7 years, 3 months ago) by hliu
Original Path: trunk
ENH: improved the help text.

Revision 13458  Directory Listing
Modified Mon May 24 17:49:07 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
ENH:  Improved the robustness of the debugging code, and removed errant debugging images that were being created.

Revision 13457  Directory Listing
Modified Mon May 24 16:03:24 2010 UTC (7 years, 3 months ago) by vrnova
Original Path: trunk
ENH: New feature: Distance Color Blending (for helping to display depth information)

Revision 13456  Directory Listing
Modified Mon May 24 15:47:58 2010 UTC (7 years, 3 months ago) by demian
Original Path: trunk
ENH: Regorganization of the Diffusion and Tractography related modules and improvement of their docmentation. Commited from revision 13442 Branch Slicer-3-6

Revision 13453  Directory Listing
Modified Mon May 24 14:50:51 2010 UTC (7 years, 3 months ago) by hjohnson
Original Path: trunk
COMP: Attempting to get the windows build requirements correct for snprintf function.

Revision 13452  Directory Listing
Modified Mon May 24 08:23:34 2010 UTC (7 years, 3 months ago) by clisle
Original Path: trunk
ENH: Meshing Module - adding image and model import capability

Revision 13451  Directory Listing
Modified Sun May 23 11:41:31 2010 UTC (7 years, 3 months ago) by partyd
Original Path: trunk
ENH: more warning supression for blt.

Revision 13450  Directory Listing
Modified Sun May 23 02:15:55 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: add more warnings.

Revision 13449  Directory Listing
Modified Sat May 22 19:13:50 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH: replaced qt range slider with range widget for Volume Display widget

Revision 13448  Directory Listing
Modified Sat May 22 16:19:23 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
COMP: Fix type error in Superbuild/CMakeLists.txt

Use -DCTK_PLUGIN_org.commontk.eventbus:BOOL=OFF
instead of -DCTK_LIB_org.commontk.eventbus:BOOL=OFF

Revision 13447  Directory Listing
Modified Sat May 22 15:07:16 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH: replaced qt range slider wit range widget

Revision 13440  Directory Listing
Modified Fri May 21 20:12:10 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: debugging multiple views and cameras. Fixing creation of new camera nodes, swapping between them. Dual3D mode may not behave as expected depending on number of view and camera nodes in scene

Revision 13439  Directory Listing
Modified Fri May 21 19:54:16 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: disable edit properties on camera nodes, as the cameras gui isn't intuitive for users

Revision 13438  Directory Listing
Modified Fri May 21 13:21:36 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
COMP: Updated Superbuild/CTK - Libraries PluginFramework and org.commontk.eventbus are disabled

Revision 13437  Directory Listing
Modified Fri May 21 13:14:53 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
COMP: more warning supression for SuperBuilds.

Revision 13436  Directory Listing
Modified Fri May 21 11:17:52 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: getting rid of cdash complaints of unused variable

Revision 13433  Directory Listing
Modified Fri May 21 01:45:06 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
ENH:  Added improved documentation, simplified user interface, improved testing, and merged across all versions of the tools.

Revision 13431  Directory Listing
Modified Thu May 20 22:37:44 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: add link to cameras gui for camera nodes

Revision 13430  Directory Listing
Modified Thu May 20 21:55:02 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: a backward compatibility issue, some old mrml files have multiple camera nodes pointing to the same view node, make sure only one camera node points to a given view node

Revision 13429  Directory Listing
Modified Thu May 20 21:22:32 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: Nicole and I have been Camera and View node hell on both the trunk and the branch! This change ensures that when the ActiveTag is changed on a CameraNode, that the axis actors get updated to use the new camera. Previously this change was not reached in the logic if the bounding box was unchanged.

Revision 13428  Directory Listing
Modified Thu May 20 19:56:51 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: add labels to the GUI to show current values of selected camera node position, view up, focal point

Revision 13427  Directory Listing
Modified Thu May 20 19:11:55 2010 UTC (7 years, 4 months ago) by francois_budin
Original Path: trunk
BUG: The file transform extension has to be .txt

Revision 13426  Directory Listing
Modified Thu May 20 17:59:09 2010 UTC (7 years, 4 months ago) by rjosest
Original Path: trunk
BUG: Remove Nonlinear option for tensor estimation (still experimental)

Revision 13425  Directory Listing
Modified Thu May 20 17:35:36 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix case of cmake append directive (screamify)

Revision 13424  Directory Listing
Modified Thu May 20 17:14:29 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: more comprehensive testing

Revision 13423  Directory Listing
Modified Thu May 20 15:32:41 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
COMP: init empty int vec to null

Revision 13422  Directory Listing
Modified Thu May 20 15:25:59 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: fixing memory leak

Revision 13420  Directory Listing
Modified Thu May 20 13:36:45 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: add more warning supression. COMP: Fix mistakenly added dependency of Python on Tk when building on Windows.

Revision 13419  Directory Listing
Modified Thu May 20 13:30:51 2010 UTC (7 years, 4 months ago) by hayes
Original Path: trunk
BUG: Fixed typo

Revision 13418  Directory Listing
Modified Thu May 20 02:03:37 2010 UTC (7 years, 4 months ago) by rjosest
Original Path: trunk
ENH: Updating documentation

Revision 13417  Directory Listing
Modified Thu May 20 02:03:22 2010 UTC (7 years, 4 months ago) by rjosest
Original Path: trunk
ENH: Updating documentation

Revision 13416  Directory Listing
Modified Thu May 20 02:02:06 2010 UTC (7 years, 4 months ago) by rjosest
Original Path: trunk
ENH: Updating documentation

Revision 13415  Directory Listing
Modified Wed May 19 20:30:38 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: propagating changes to fetchmi from 3-6 branch to trunk. Using Load instead of Import on scenes.

Revision 13413  Directory Listing
Modified Wed May 19 18:25:53 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: remove debugging print outs

Revision 13410  Directory Listing
Modified Wed May 19 15:09:11 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: switch VTK to use Steve's new git repo.

Revision 13409  Directory Listing
Modified Wed May 19 12:56:53 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: Add new CTestCustom file that will exclude warnings from external project libraries other than Slicer. This should make the dashboard much easier to read.

Revision 13408  Directory Listing
Modified Wed May 19 01:44:06 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
ENH:  Simplified the user interface for BRAINSFit.

Revision 13407  Directory Listing
Modified Wed May 19 00:01:45 2010 UTC (7 years, 4 months ago) by tokuda
Original Path: trunk
ENH: initialize scalar array.

Revision 13406  Directory Listing
Modified Tue May 18 22:25:04 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
COMP: Qt 4.6 is required within SuperBuild/CMakeLists.txt

Revision 13405  Directory Listing
Modified Tue May 18 22:23:29 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
COMP: PythonQt is not any more a direct dependency of Slicer

CTK will download/configure/build PythonQt

Revision 13404  Directory Listing
Modified Tue May 18 20:13:20 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: when see that a new ruler node has been added to the scene, make it active in the GUI (useful for control-m case)

Revision 13403  Directory Listing
Modified Tue May 18 19:15:30 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: check for null pointers, change some args to uri instead of filename

Revision 13402  Directory Listing
Modified Tue May 18 14:37:01 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
STYLE: update button tool tip with the hot key info

Revision 13401  Directory Listing
Modified Tue May 18 13:47:26 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk
ENH: consistant GUI label and messages on rendering methods

Revision 13400  Directory Listing
Modified Tue May 18 13:45:28 2010 UTC (7 years, 4 months ago) by finetjul
Original Path: trunk
COMP: Add vtkMRMLAnnotationTextNode classes.

Revision 13399  Directory Listing
Modified Mon May 17 23:14:26 2010 UTC (7 years, 4 months ago) by finetjul
Original Path: trunk
BUG: TextNode is added.
BUG: ROI, Bidimensional Line, and Spline are initialized.

Revision 13398  Directory Listing
Modified Mon May 17 22:24:03 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: add a button to access the application gui's wrapper around making a new ruler from fiducials (it handles naming the ruler via a popup, so avoid recreating that code here)

Revision 13397  Directory Listing
Modified Mon May 17 21:51:17 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: if not building KWWidgets then python will not depend on tcl/tk nor build tkinter.

Revision 13395  Directory Listing
Modified Mon May 17 21:30:46 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: add info about how to create ruler from fids to help panel

Revision 13394  Directory Listing
Modified Mon May 17 21:30:20 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: update version on title bar

Revision 13392  Directory Listing
Modified Mon May 17 21:00:16 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: fix link to docs

Revision 13391  Directory Listing
Modified Mon May 17 19:40:39 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 13390  Directory Listing
Modified Mon May 17 19:23:16 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: check for null pointers

Revision 13389  Directory Listing
Modified Mon May 17 19:13:39 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: remove control-m's in the .xml file by running dos2unix on it

Revision 13388  Directory Listing
Modified Mon May 17 18:48:40 2010 UTC (7 years, 4 months ago) by pkarasev
Original Path: trunk
COMP: custom test for sparse-field segment, modify the handler to not use bit-wise compare and instead use flag in the module

Revision 13387  Directory Listing
Modified Mon May 17 18:25:01 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: fix pythong copying the wrong version of the python dll, fix by using CMAKE_CFG_INITDIR.

Revision 13386  Directory Listing
Modified Mon May 17 17:24:58 2010 UTC (7 years, 4 months ago) by pkarasev
Original Path: trunk
COMP: update the vtp data for SFLS mesh contour segmentation

Revision 13385  Directory Listing
Modified Mon May 17 15:51:37 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: fix doc link

Revision 13384  Directory Listing
Modified Mon May 17 15:05:51 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: use vtkIdType when iterating over a string array, trying to avoid compiler warnings

Revision 13382  Directory Listing
Modified Fri May 14 22:33:43 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: print out the supported write types, the vtkStringArray print doesn't iterate through the strings

Revision 13381  Directory Listing
Modified Fri May 14 21:53:11 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: fix a memory leak

Revision 13380  Directory Listing
Modified Fri May 14 21:32:41 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: fix bugs found in testing, use new testing macros

Revision 13379  Directory Listing
Modified Fri May 14 20:53:37 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: make new EXERCISE_BASIC_TRANSFORM_MRML_METHODS testing macro, use it, fix bug found with it. Converting more tests to macros, for the colour nodes only test the transformable methods until get new storage nodes sorted out

Revision 13378  Directory Listing
Modified Fri May 14 20:34:32 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: check for null helper pointer, exposed by testing

Revision 13377  Directory Listing
Modified Fri May 14 19:37:14 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: provide a concrete default storage node for testing

Revision 13376  Directory Listing
Modified Fri May 14 19:31:42 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: provide a concerte default storage node

Revision 13375  Directory Listing
Modified Fri May 14 19:20:27 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: the time series volume node doesn't define the proper subclasses for a storable node, for now just use a scalar volume storage node

Revision 13372  Directory Listing
Modified Fri May 14 15:37:46 2010 UTC (7 years, 4 months ago) by clisle
Original Path: trunk
BUG: fix typo on build logic for MainMirrorUnstructuredGridCellTest 

Revision 13371  Directory Listing
Modified Thu May 13 22:56:58 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: use the testing macro

Revision 13370  Directory Listing
Modified Thu May 13 22:55:56 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: include the storage node header here, add another test ext for storabe nodes, test create node instance

Revision 13369  Directory Listing
Modified Thu May 13 22:16:52 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: use the testing macros, same fault as the diffusion node

Revision 13368  Directory Listing
Modified Thu May 13 22:10:19 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
BUG:0000842: Attempting to address bug issue where ScaleVersor3DTransforms are not readable/writable.

Revision 13367  Directory Listing
Modified Thu May 13 21:55:32 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: removing infinte loop in ReadXMLAttributes

Revision 13366  Directory Listing
Modified Thu May 13 21:50:22 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: updating volume node tests to use new macros. vtkMRMLDiffusionTensorVolumeNodeTest1 is currently failing because it implements a different logic in it's SetAndObserveDisplayNodeID, checking for a null scene

Revision 13365  Directory Listing
Modified Thu May 13 21:20:19 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
COMP: In CMakeLists.txt, CTK_DIR should be set to ${CMAKE_BINARY_DIR}/CTK-build not ${CMAKE_BINARY_DIR}/CTK-build/CTK-build

Indeed the CTKConfig.cmake is located in ${CMAKE_BINARY_DIR}/CTK-build

Revision 13364  Directory Listing
Modified Thu May 13 21:11:54 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
COMP: Superbuild - Make sure External_PythonQt is included

Todo: Python26 should also be build without dependencies with Tcl and Tk

Revision 13363  Directory Listing
Modified Thu May 13 21:06:45 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: testing uncovered some null pointers not being checked for

Revision 13362  Directory Listing
Modified Thu May 13 20:36:48 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
STYLE: add comments about each test macro

Revision 13361  Directory Listing
Modified Thu May 13 20:25:44 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
COMP: Fix typo

Revision 13360  Directory Listing
Modified Thu May 13 20:00:21 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: use smart pointer for the storage node to avoid leaks

Revision 13359  Directory Listing
Modified Thu May 13 19:59:53 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk
ENH: added BrainlabModule.

Revision 13358  Directory Listing
Modified Thu May 13 19:59:26 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: use smart pointer for the storage node to avoid leaks

Revision 13357  Directory Listing
Modified Thu May 13 19:58:26 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: chain the testing macros by passing the classname for making the base mrml macro new node, provide some range ones that test outside and inside the ranges, use the display node test macros

Revision 13356  Directory Listing
Modified Thu May 13 19:29:23 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
COMP: Remove extra header qSlicerLayoutManager.h from SlicerQT/Main.cxx

Revision 13355  Directory Listing
Modified Thu May 13 17:48:23 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
COMP: Update qMRMLWidgets/CMakeLists.txt to use CTK_LIBRARIES

Revision 13354  Directory Listing
Modified Thu May 13 17:48:20 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
STYLE: In qSlicerCoreApplication, remove extra line

Revision 13353  Directory Listing
Modified Thu May 13 17:48:16 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
STYLE: in vtkSlicerApplicationGUI - Remove extra comment

Revision 13352  Directory Listing
Modified Thu May 13 17:48:13 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
STYLE: Remove extra empty line in vtkMRMLViewNode.cxx

Revision 13351  Directory Listing
Modified Thu May 13 17:48:09 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
STYLE: in qMRMLSceneModel, comment debug statement

Revision 13350  Directory Listing
Modified Thu May 13 17:48:06 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
STYLE: In applications/SlicerQT/Main.cxx, remove unused call Q_INIT_RESOURCE

Revision 13349  Directory Listing
Modified Thu May 13 17:48:02 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
ENH: Move and renamed "Visibile*.png" images from QTGUI to qMRMLWidgets

Revision 13348  Directory Listing
Modified Thu May 13 15:52:50 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
ENH: handles slice interleaving dicom series now.

Revision 13347  Directory Listing
Modified Thu May 13 14:35:08 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
COMP: temporarily disable building EMSegmentBatchMakeModule until Kilian can fix it's EMSegmentCommandLine_GUIVersion dependency.

Revision 13346  Directory Listing
Modified Thu May 13 13:14:29 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: First pass revamp of dependencies.

Revision 13345  Directory Listing
Modified Wed May 12 22:52:54 2010 UTC (7 years, 4 months ago) by finetjul
Original Path: trunk
COMP: On Windows, Python does not depends on the project tk (because it doesn't exist). Update the path of the StringFindReplace.cmake file.
Tk is automatically retrieved with tcl.

Revision 13343  Directory Listing
Modified Wed May 12 21:21:19 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
BUG: Fix dependencies that were lost when splitting targets into separate files.

Revision 13342  Directory Listing
Modified Wed May 12 21:16:54 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
COMP: always build curl as shared.

Revision 13341  Directory Listing
Modified Wed May 12 21:08:32 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
STYLE: cleanup itcl_configure_step.cmake.in

Revision 13340  Directory Listing
Modified Wed May 12 20:26:46 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: Force a call to Exit() at the start of Enter() to release previous widgets incase two calls to Enter() occur without a call to Exit()

Revision 13339  Directory Listing
Modified Wed May 12 19:20:29 2010 UTC (7 years, 4 months ago) by finetjul
Original Path: trunk
COMP: Add CTK + BatchMake library dependencies in Superbuild.

Revision 13338  Directory Listing
Modified Wed May 12 18:56:41 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
BUG: In qMRMLEventLogger, macro QMRMLEVENTLOGGER_ONEVENT_SLOT_MACRO now output to console the correct emitted signal

Revision 13337  Directory Listing
Modified Wed May 12 18:56:37 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
ENH: Both signal signatures "currentMRMLSceneChanged" and "mrmlSceneChanged" were existing. Rename all to "mrmlSceneChanged"

Revision 13336  Directory Listing
Modified Wed May 12 18:56:32 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
BUG: In CLIModuleUIHelper, compute min and max range properly

Since, ctkDoubleSlider checks that MIN_INT < doubleValue / this->SingleStep < MAX_INT

Assuming the singlestep won't be smaller than 0.01,
the min/max range set from the helper is divided by 100.

Revision 13335  Directory Listing
Modified Wed May 12 18:56:29 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
ENH: Added option --verbose-module-discovery to SlicerQT

qWarning and qDebug from the different module factory are now
surrounded by if(this->verbose) statement.

Revision 13334  Directory Listing
Modified Wed May 12 18:56:23 2010 UTC (7 years, 4 months ago) by jcfr
Original Path: trunk
BUG: Exclude miAnnotation if QT support is enabled without KWWidgets

Since the module relies on functionality which have not been ported
to QT, this was expected.

Revision 13333  Directory Listing
Modified Wed May 12 16:35:51 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: update the testing macros to offer explicit vars for testing int, double, vector, or to do random with a max value

Revision 13332  Directory Listing
Modified Wed May 12 12:34:19 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: rework RenderPending to avoid issue where flag could be set but never reset

Revision 13330  Directory Listing
Modified Tue May 11 23:34:29 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: don't allow double invocation of threshold

Revision 13329  Directory Listing
Modified Tue May 11 22:01:21 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: remove the local ExternalProject and instead use CTK's.

Revision 13328  Directory Listing
Modified Tue May 11 21:57:40 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: optimize render calls to avoid duplicate calculations

Revision 13327  Directory Listing
Modified Tue May 11 21:41:48 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
STYLE: remove debugging output

Revision 13326  Directory Listing
Modified Tue May 11 21:40:41 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
STYLE: remove debugging output

Revision 13325  Directory Listing
Modified Tue May 11 21:37:18 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: resolution is an int

Revision 13324  Directory Listing
Modified Tue May 11 21:32:41 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: add a storage node test macro, fixing bugs it found, using new macros

Revision 13323  Directory Listing
Modified Tue May 11 21:22:26 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: First pass massive reorganization of SuperBuild, splitting each target into seperate files named External_<target>. COMP: Merge in Changes from Slicer4 branch.

Revision 13322  Directory Listing
Modified Tue May 11 19:49:23 2010 UTC (7 years, 4 months ago) by finetjul
Original Path: trunk
COMP: CTK was missing VTK dependency in SuperBuild

Revision 13321  Directory Listing
Modified Tue May 11 19:33:26 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED 839: Removed recursive calls to SlicerViewerVidget::UpdateAxis

Revision 13319  Directory Listing
Modified Tue May 11 18:43:35 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: detect case where empty string is returned since it is considered a double value by the format command

Revision 13318  Directory Listing
Modified Tue May 11 18:11:54 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED: ClipModel does not call Render

Revision 13316  Directory Listing
Modified Tue May 11 17:33:28 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: remove unused variable

Revision 13315  Directory Listing
Modified Tue May 11 16:43:17 2010 UTC (7 years, 4 months ago) by finetjul
Original Path: trunk
ENH: Merge Slicer4 branch on trunk rev12438 -> rev13314

Revision 13313  Directory Listing
Modified Tue May 11 14:22:04 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED:
Fixed VolRen ROI fit to volume for the case when volume was outside the original ROI range

Revision 13311  Directory Listing
Modified Tue May 11 12:57:25 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
BUG: some diffusion related public tags (0018|90xx, 0018|91xx) are already in gdcm dictionary. Adding them produces warnings -- rather than errors.

Revision 13310  Directory Listing
Modified Tue May 11 12:32:19 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
BUG: some diffusion related public tags (0018|90xx, 0018|91xx) are already in gdcm dictionary. Adding them produces warnings -- rather than errors.

Revision 13308  Directory Listing
Modified Mon May 10 22:35:51 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
ENH: add mrml testing macros, start using them

Revision 13307  Directory Listing
Modified Mon May 10 22:33:13 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: check for null scene

Revision 13306  Directory Listing
Modified Mon May 10 21:15:28 2010 UTC (7 years, 4 months ago) by Yong
Original Path: trunk
BUG: fiducial manager is added.
BUG: value and coordinates appear for sticky node and fiducial node.
BUG: AnnotationMouseModePick/Place are updated.

Revision 13305  Directory Listing
Modified Mon May 10 21:02:31 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: check for non null scene, caught in testing

Revision 13304  Directory Listing
Modified Mon May 10 20:10:03 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: merge fix from release branch (rev 13303)

Revision 13302  Directory Listing
Modified Mon May 10 17:16:49 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
COMP: merge in using vtk mirror from trunk. STYLE: Clean up script removing unnecessary comments etc.

Revision 13300  Directory Listing
Modified Mon May 10 06:31:43 2010 UTC (7 years, 4 months ago) by hayes
Original Path: trunk
ENH: Changed version to 3.7

Revision 13299  Directory Listing
Modified Mon May 10 03:54:52 2010 UTC (7 years, 4 months ago) by ygao
Original Path: trunk
STYLE: remove robustStatisticsSeg. The RSS module has been moved to Application/CLI/ dir

Revision 13297  Directory Listing
Modified Sat May 8 21:02:32 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: bringing welcome module text up to date (didn't include meausrements module)

Revision 13294  Directory Listing
Modified Sat May 8 20:49:41 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: updating welcome module image data

Revision 13293  Directory Listing
Modified Sat May 8 17:07:44 2010 UTC (7 years, 4 months ago) by lassoan
Original Path: trunk
COMP: Fixed BRAINSTools "warning LNK4217: locally defined symbol" warnings (BRAINS..._EXPORT extern int was specified for a few local methods)

Revision 13292  Directory Listing
Modified Sat May 8 15:04:36 2010 UTC (7 years, 4 months ago) by lassoan
Original Path: trunk
COMP: Include gdcm.h instead of gdcmCommon.h (both work fine, but by definition gdcm.h "should be included by external users of gdcm")

Revision 13291  Directory Listing
Modified Sat May 8 14:51:51 2010 UTC (7 years, 4 months ago) by lassoan
Original Path: trunk
COMP: Fixed (warning LNK4217: locally defined symbol) warnings by including gdcmCommon.h

Revision 13290  Directory Listing
Modified Fri May 7 21:32:19 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
ENH:  Changed tests to use long flags to avoid problem with running tests under windows.

Revision 13288  Directory Listing
Modified Fri May 7 21:19:42 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: Merge in fixes from JCFR.

Revision 13286  Directory Listing
Modified Fri May 7 20:49:27 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: force RPATH on for Mac Builds.

Revision 13285  Directory Listing
Modified Fri May 7 18:17:52 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: add a modified version of ExternalProject that has a bug fix to address changes to configure options not propagating properly.

Revision 13284  Directory Listing
Modified Fri May 7 17:31:40 2010 UTC (7 years, 4 months ago) by Yong
Original Path: trunk
BUG: lock/unlock and annotation selection color

Revision 13282  Directory Listing
Modified Fri May 7 15:59:37 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
COMP: restore vtk cvs for the moment.

Revision 13281  Directory Listing
Modified Fri May 7 15:53:43 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: Switch SuperBuild vtk to use git repo mirror.

Revision 13279  Directory Listing
Modified Fri May 7 13:02:02 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix missing test launching configurations

Revision 13277  Directory Listing
Modified Fri May 7 02:33:04 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
ENH:  Cleaned up to make command labels consistent.

Revision 13276  Directory Listing
Modified Fri May 7 02:20:09 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
ENH: After documentation, cleaned up some xml inconsistencies, and testing name consistencies.

Revision 13275  Directory Listing
Modified Fri May 7 00:14:19 2010 UTC (7 years, 4 months ago) by Yong
Original Path: trunk
BUG: do not compile miAnnotation at this time

Revision 13273  Directory Listing
Modified Thu May 6 21:27:37 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
STYLE: better documentation for the segmentation tools

Revision 13272  Directory Listing
Modified Thu May 6 21:17:13 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
ENH:0000829:  Addressing feature enhancment http://www.na-mic.org/Bug/view.php?id=829 submitted by fedorov.

Revision 13271  Directory Listing
Modified Thu May 6 20:00:57 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
COMP: merge testing path fix from release branch

Revision 13268  Directory Listing
Modified Thu May 6 16:07:59 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk
ENH: temporarily avoid 32/64 bit integer overslow warning message

Revision 13267  Directory Listing
Modified Thu May 6 15:52:55 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix warning

Revision 13263  Directory Listing
Modified Thu May 6 13:57:41 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: enable window paths for BRAINSTools to work with slicer build system; fixes testing on window

Revision 13262  Directory Listing
Modified Thu May 6 13:49:43 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
COMP: disable test on apple until it is understood what is being tested

Revision 13261  Directory Listing
Modified Wed May 5 23:19:24 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: use the updated contour points, new baseline

Revision 13260  Directory Listing
Modified Wed May 5 22:58:48 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: get the jar and .tcl files installed when using cpack, if out the SPECTRE stuff for now

Revision 13259  Directory Listing
Modified Wed May 5 22:42:02 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: enable testing on windows now that have 32 bit baseline to compare against

Revision 13258  Directory Listing
Modified Wed May 5 22:26:34 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: force xml poly data writer to write out 32 bit, and update the baseline test

Revision 13257  Directory Listing
Modified Wed May 5 22:06:41 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: always write out .vtp files using Id type of int 32, and new int 32 baseline for comparison

Revision 13256  Directory Listing
Modified Wed May 5 22:04:04 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: diff demons binary moved to bin, but tcl script was not updated

Revision 13255  Directory Listing
Modified Wed May 5 22:02:47 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: move diff demons one level up to reduce the chances of exceeding 260
character path length limitation on windows

Revision 13254  Directory Listing
Modified Wed May 5 21:49:24 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: use the launcher on the merge model test. TODO: figure out why output of the cli is different on 32 and 64 bit machines

Revision 13253  Directory Listing
Modified Wed May 5 20:11:49 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
STYLE: more example data

Revision 13252  Directory Listing
Modified Wed May 5 20:00:46 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
STYLE: rename modules to match wiki documentation

Revision 13251  Directory Listing
Modified Wed May 5 19:47:04 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
STYLE: improved documentation for segmentation and registration

Revision 13250  Directory Listing
Modified Wed May 5 18:58:39 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: hide message from users

Revision 13249  Directory Listing
Modified Wed May 5 18:55:26 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk
ENH: ray length checking against possible numerical error causing video card freeze

Revision 13248  Directory Listing
Modified Wed May 5 18:53:05 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
STYLE: remove 'python' from module names to match documentation (modules are named by functionality not by implementation language)

Revision 13247  Directory Listing
Modified Wed May 5 18:47:56 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
COMP:  Another attempt to try to build sufficient dependancies for supporting parallel builds of Slicer3.

Revision 13246  Directory Listing
Modified Wed May 5 18:25:48 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
ENH: enable extra documentation for module categories

Revision 13245  Directory Listing
Modified Wed May 5 18:25:23 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: misnamed file

Revision 13244  Directory Listing
Modified Wed May 5 18:20:22 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
ENH: framework for additional documentation for segmentation

Revision 13243  Directory Listing
Modified Wed May 5 18:14:53 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
ENH: framework for additional documentation for registration

Revision 13242  Directory Listing
Modified Wed May 5 15:40:28 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: point to the mipav dir and SPECTRE jar file from Slicer3_HOME if it's defined

Revision 13241  Directory Listing
Modified Wed May 5 15:03:52 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: use the launcher to run cmake so it can find the test code, added an error if the test command failed to run

Revision 13240  Directory Listing
Modified Wed May 5 14:43:34 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH: fixed doc links

Revision 13239  Directory Listing
Modified Wed May 5 13:42:41 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED 819
Fixed recursion in the 3d viewer update

Revision 13238  Directory Listing
Modified Wed May 5 13:24:49 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk
ENH: disconnect rendering pipeline in TeardownGUI()

Revision 13237  Directory Listing
Modified Wed May 5 13:17:04 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
COMP:  Attempting to get parallel builds to work correctly under windows.

Revision 13236  Directory Listing
Modified Wed May 5 12:50:53 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix failing test condition where menu is not initialized

Revision 13235  Directory Listing
Modified Wed May 5 02:18:59 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
COMP: Removed unnecessary programs.

Revision 13234  Directory Listing
Modified Tue May 4 22:09:07 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
ENH: if a module name ends in Welcome, make it first in the module list

Revision 13233  Directory Listing
Modified Tue May 4 21:59:39 2010 UTC (7 years, 4 months ago) by ygao
Original Path: trunk
BUG remove two obsolete files and change the CMakeList accordingly

Revision 13232  Directory Listing
Modified Tue May 4 21:58:49 2010 UTC (7 years, 4 months ago) by ygao
Original Path: trunk
BUG remove two obsolete files

Revision 13231  Directory Listing
Modified Tue May 4 21:55:26 2010 UTC (7 years, 4 months ago) by ygao
Original Path: trunk
BUG remove an obsolete file which may cause preprocessing error

Revision 13230  Directory Listing
Modified Tue May 4 21:48:22 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
STYLE: make menu order match wiki; add Editor to Segmentation and Transforms to Registrtion cascade menus

Revision 13229  Directory Listing
Modified Tue May 4 21:43:54 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: changing it back, don't run this test with the launcher as we're using cmake to launch it

Revision 13219  Directory Listing
Modified Tue May 4 21:22:00 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: point to the slicer3 exe in the binary dir, hopefully will work better on windows

Revision 13218  Directory Listing
Modified Tue May 4 21:10:37 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: set up the test so ctest can find the test file and data files. TODO: move the test files into the proper dir, make a baseline to compare it to

Revision 13217  Directory Listing
Modified Tue May 4 21:08:58 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
COMP: avoid duplicate symbol errors on windows compiles

Revision 13216  Directory Listing
Modified Tue May 4 20:20:52 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: added documentation URI for lauren

Revision 13215  Directory Listing
Modified Tue May 4 19:44:07 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
STYLE: warning macro to debug

Revision 13214  Directory Listing
Modified Tue May 4 19:36:58 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: set the viewer widget and interactor style to null before deleting seed widgets. only render if seeds enabled. removed old header files

Revision 13213  Directory Listing
Modified Tue May 4 19:35:34 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: check for null node and selected list node

Revision 13209  Directory Listing
Modified Tue May 4 17:29:40 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: set TestLocation to an empty string rather than a space, as it was leading to --launch \ TestBinary, and not finding the TestBinary

Revision 13208  Directory Listing
Modified Tue May 4 16:30:41 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: further improvements to linking VTK on Mac.

Revision 13207  Directory Listing
Modified Tue May 4 15:33:57 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
COMP: fix missing endif().

Revision 13206  Directory Listing
Modified Tue May 4 15:17:08 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: Add flags and build options to build VTK with X11 only on Mac.

Revision 13205  Directory Listing
Modified Tue May 4 14:49:32 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: change button order per request from Ron

Revision 13204  Directory Listing
Modified Tue May 4 13:33:04 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix warning about unused variable

Revision 13203  Directory Listing
Modified Tue May 4 12:48:49 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: Fix SuperBuild to use KWWidgets Tag Slicer-3-6.

Revision 13202  Directory Listing
Modified Tue May 4 12:07:36 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: include launcher so test can be run with shared libraries (test still fails)

Revision 13201  Directory Listing
Modified Tue May 4 04:24:00 2010 UTC (7 years, 4 months ago) by ibanez
Original Path: trunk
ENH: The output file composed with $1 should expect a full path.
     This will be better done with a CMake function inside of the Testing/CMakeLists.txt file.

Revision 13200  Directory Listing
Modified Tue May 4 04:22:55 2010 UTC (7 years, 4 months ago) by ibanez
Original Path: trunk
ENH: Added potential path for the names of CLI executables, to be used when running them from Valgrind.

Revision 13199  Directory Listing
Modified Tue May 4 04:12:36 2010 UTC (7 years, 4 months ago) by ibanez
Original Path: trunk
ENH: Setting up configuration for automating the process of running Valgrind in the CLI Modules.

Revision 13198  Directory Listing
Modified Tue May 4 01:09:15 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
BUG: CommandLine now works and task should be correctly downloaded 

Revision 13193  Directory Listing
Modified Mon May 3 22:18:17 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: make sure that the archetype is first in the updated file list for upload

Revision 13192  Directory Listing
Modified Mon May 3 22:12:03 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed links in welcome module

Revision 13191  Directory Listing
Modified Mon May 3 22:05:36 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED: fixed interpolation

Revision 13185  Directory Listing
Modified Mon May 3 22:02:46 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix download links for data access

Revision 13184  Directory Listing
Modified Mon May 3 20:54:01 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
COMP: fix compilation warning. STYLE: fix copy/paste error

Revision 13183  Directory Listing
Modified Mon May 3 20:53:13 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: improved tooltip balloon help to explain slice number display

Revision 13181  Directory Listing
Modified Mon May 3 20:37:43 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: loading sample data stuff.

Revision 13180  Directory Listing
Modified Mon May 3 20:09:01 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
COMP:  Attempting to make external object properly built for Windows computers.

Revision 13179  Directory Listing
Modified Mon May 3 20:04:51 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: take out the widget name string for removed button

Revision 13178  Directory Listing
Modified Mon May 3 20:00:10 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
COMP:  Attempting ot blindly fix windows shared library issues.

Revision 13177  Directory Listing
Modified Mon May 3 19:43:39 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: updating welcome module's logo to reflect current version number

Revision 13176  Directory Listing
Modified Mon May 3 19:43:13 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: updating welcome module's logo to reflect current version number

Revision 13175  Directory Listing
Modified Mon May 3 19:27:19 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
COMP: fixed compiler warning and typo

Revision 13174  Directory Listing
Modified Mon May 3 19:17:17 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
COMP: removing compiler warning, precedence

Revision 13173  Directory Listing
Modified Mon May 3 19:14:02 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
COMP: removing compiler warnings

Revision 13172  Directory Listing
Modified Mon May 3 19:05:51 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
COMP: Fixed compilation of BRAINSDemonWarp by creating a separate library, and including the windows flags for that library.

Revision 13171  Directory Listing
Modified Mon May 3 18:34:32 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
COMP: removing un/signed mismatch, unused vars

Revision 13170  Directory Listing
Modified Mon May 3 17:27:09 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: use the correct color table to be consistent with documentation

Revision 13167  Directory Listing
Modified Mon May 3 15:06:08 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
COMP: removing Qdec module and library for 3.6 module cull, removed refs from Query Atlas, removed tests

Revision 13166  Directory Listing
Modified Mon May 3 15:00:02 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: use smart pointers to avoid memory leaks

Revision 13165  Directory Listing
Modified Mon May 3 05:33:35 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
BUG: Resolving issues around command line module

Revision 13164  Directory Listing
Modified Sun May 2 23:52:08 2010 UTC (7 years, 4 months ago) by ibanez
Original Path: trunk
ENH: Refining the generation of the list of modules.

Revision 13163  Directory Listing
Modified Sun May 2 22:53:27 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
BUG: Fixed EMSegment Simple 

Revision 13162  Directory Listing
Modified Sun May 2 18:34:27 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: uninitialized path after migrating from Applications/CLI

Revision 13161  Directory Listing
Modified Sun May 2 18:33:37 2010 UTC (7 years, 4 months ago) by pkarasev
Original Path: trunk
BUG: baseline dataset SFLS

Revision 13160  Directory Listing
Modified Sun May 2 17:22:30 2010 UTC (7 years, 4 months ago) by pkarasev
Original Path: trunk
BUG: test data set update: 'virtual colonoscopy' from Ron

Revision 13159  Directory Listing
Modified Sun May 2 17:11:08 2010 UTC (7 years, 4 months ago) by pkarasev
Original Path: trunk
BUG: SFLS implementation: path init, update scheme

Revision 13158  Directory Listing
Modified Sun May 2 15:59:56 2010 UTC (7 years, 4 months ago) by lantiga
Original Path: trunk
ENH: added link to 3.6 documentation pages

Revision 13157  Directory Listing
Modified Sun May 2 01:52:47 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: build diff demons, install in bin

Revision 13156  Directory Listing
Modified Sun May 2 00:42:19 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: move diff demons to Modules/ChangeTracker/CommandLineApplication
from Applications/CLI. This should be substituted with BRAINSDemonsWarp
in the future

Revision 13155  Directory Listing
Modified Sun May 2 00:29:27 2010 UTC (7 years, 4 months ago) by sylvain
Original Path: trunk
ENH: fix link to Slicer 3.6 documentation wiki. improve acknowledgments section. add tests and test data.

Revision 13154  Directory Listing
Modified Sun May 2 00:25:44 2010 UTC (7 years, 4 months ago) by sylvain
Original Path: trunk
ENH: Add png file with MIT logo and NAMIC logo side-by-side

Revision 13153  Directory Listing
Modified Sat May 1 19:05:48 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: plugin was not installed

Revision 13152  Directory Listing
Modified Sat May 1 16:46:35 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
COMP: turn off batch make by default for slicer builds

Revision 13151  Directory Listing
Modified Sat May 1 13:38:50 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: avoid possible bad access through null pointer

Revision 13150  Directory Listing
Modified Sat May 1 12:38:53 2010 UTC (7 years, 4 months ago) by aylward
Original Path: trunk
BUG: Does not check for existence of Slicer3_EXE.  Prohibits use outside of Slicer.

Revision 13149  Directory Listing
Modified Fri Apr 30 22:41:01 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: initialize all variables in the constructor

Revision 13148  Directory Listing
Modified Fri Apr 30 22:18:37 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: configure the convenience scripts for individual tests

Revision 13147  Directory Listing
Modified Fri Apr 30 22:14:20 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: adding helper scripts for testing coverage and memory leaks in idividual
modules

Revision 13146  Directory Listing
Modified Fri Apr 30 21:39:07 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: copy the ACPC test mrml file to the binary dir where it can be modified without triggering a source dir is locally modified warning on the dashboard

Revision 13145  Directory Listing
Modified Fri Apr 30 21:26:34 2010 UTC (7 years, 4 months ago) by ibanez
Original Path: trunk
BUG: Member variables m_Spacing and  m_Size were not initialized.

Revision 13141  Directory Listing
Modified Fri Apr 30 21:09:49 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: avoid crash when pushing button before initializing tracker

Revision 13140  Directory Listing
Modified Fri Apr 30 20:13:05 2010 UTC (7 years, 4 months ago) by pkarasev
Original Path: trunk
BUG: SFLS implementation: path init, update scheme

Revision 13139  Directory Listing
Modified Fri Apr 30 20:11:44 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix URL

Revision 13138  Directory Listing
Modified Fri Apr 30 20:10:02 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
COMP:  Disable the test until they can be debugged.

Revision 13137  Directory Listing
Modified Fri Apr 30 20:07:11 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix URL

Revision 13136  Directory Listing
Modified Fri Apr 30 19:56:40 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix up boundary cases for working with multiple existing label maps with their own color nodes

Revision 13135  Directory Listing
Modified Fri Apr 30 19:39:00 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
ENH:  Added test suite for BRAINSTools.

Revision 13134  Directory Listing
Modified Fri Apr 30 19:38:51 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH: removed ROI lists, updated modules help.

Revision 13133  Directory Listing
Modified Fri Apr 30 19:33:35 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
ENH:  Adding in test suite of tools to svn.

Revision 13132  Directory Listing
Modified Fri Apr 30 19:29:51 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: set up the default save location for a new colour node to be in the first user defined colour path

Revision 13131  Directory Listing
Modified Fri Apr 30 18:33:51 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: update the gui with the default label map colour node when create it, and update it with the passed in node in the Enter method (called from Edit Properties). Changed the selection warning to a debug, it's not user friendly.

Revision 13130  Directory Listing
Modified Fri Apr 30 18:25:32 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: fix logic error, only delete if NOT null

Revision 13129  Directory Listing
Modified Fri Apr 30 18:18:03 2010 UTC (7 years, 4 months ago) by ygao
Original Path: trunk
ENH: added the RobustStaticsSegmenter into trunk/Application/CLI/RobustStatisticsSegmenter dirctory. it compiles and works on my machien: 64bit RHEL gcc 4.1.2

Revision 13128  Directory Listing
Modified Fri Apr 30 17:48:31 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
STYLE: write out a more verbose error message if the user defined colour path directory doesn't exist

Revision 13127  Directory Listing
Modified Fri Apr 30 17:37:26 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: skip the test on windows

Revision 13126  Directory Listing
Modified Fri Apr 30 17:36:44 2010 UTC (7 years, 4 months ago) by ibanez
Original Path: trunk
ENH: shell script for generating the list of slicer modules by running Slicer and using its own discovery mechanism.

Revision 13125  Directory Listing
Modified Fri Apr 30 16:59:13 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
ENH: corrected staled document URL.

Revision 13124  Directory Listing
Modified Fri Apr 30 16:52:02 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
ENH: corrected a typo.

Revision 13123  Directory Listing
Modified Fri Apr 30 16:50:22 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: actually test the output of the merge models module, using a helper file

Revision 13122  Directory Listing
Modified Fri Apr 30 16:49:07 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: add missing baseline output for the merge models test

Revision 13121  Directory Listing
Modified Fri Apr 30 16:34:39 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: revert changed tooltip name

Revision 13120  Directory Listing
Modified Fri Apr 30 16:22:59 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
ENH: help on UI pointed to the wrong link.

Revision 13119  Directory Listing
Modified Fri Apr 30 16:12:09 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: better handling of dialog box position and edit selections

Revision 13118  Directory Listing
Modified Fri Apr 30 16:05:06 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: disable SparseFieldLevelSetContourTest1 on windows, doesn't link

Revision 13117  Directory Listing
Modified Fri Apr 30 15:45:53 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
BUG: removed strange ROI bahavior and registration type bug - Template Builder works now - registration algorithm is still an issue

Revision 13116  Directory Listing
Modified Fri Apr 30 15:11:15 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
ENH: documentation link was missing

Revision 13115  Directory Listing
Modified Fri Apr 30 14:37:59 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
COMP: add in windows build command

Revision 13114  Directory Listing
Modified Fri Apr 30 13:44:06 2010 UTC (7 years, 4 months ago) by ibanez
Original Path: trunk
BUG: Synchronizing the rollover time with CDash to 3am UTC.

Revision 13113  Directory Listing
Modified Fri Apr 30 13:29:47 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: switch to cross platform Round function

Revision 13112  Directory Listing
Modified Fri Apr 30 13:26:58 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED: fixed build error

Revision 13111  Directory Listing
Modified Fri Apr 30 12:57:26 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: disable tests for culled module

Revision 13110  Directory Listing
Modified Fri Apr 30 11:48:10 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: try fix for failing fresh/nightly build that doesn't find Slicer3 (because it hasn't been built yet)

Revision 13109  Directory Listing
Modified Fri Apr 30 07:14:24 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
BUG: fixed preprocessing 

Revision 13108  Directory Listing
Modified Fri Apr 30 07:13:41 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
BUG: fixed preprocessing 

Revision 13107  Directory Listing
Modified Fri Apr 30 02:02:08 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
BUG: corrected URL for online Documentation.

Revision 13106  Directory Listing
Modified Fri Apr 30 01:07:10 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
ENH: add more test for MedianImageFilter.

Revision 13105  Directory Listing
Modified Thu Apr 29 23:24:43 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
COMP: Newly added test only works from withing the Slicer3 Tree, adn this was causing external packages that depend on DicomToNrrd to fail.

Revision 13104  Directory Listing
Modified Thu Apr 29 23:13:47 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
STYLE: fix a tool tip

Revision 13103  Directory Listing
Modified Thu Apr 29 22:33:17 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: update doc link, moving tags to top

Revision 13102  Directory Listing
Modified Thu Apr 29 22:21:05 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: update to Bone and Skin entries after the wiki pages were updated

Revision 13101  Directory Listing
Modified Thu Apr 29 22:14:48 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: pass in a test mrml file to the acpc test. The file does get over written when the test is run, but only the first node changes. The second node, vtkMRMLLinearTransformNode2, contains the expected output

Revision 13100  Directory Listing
Modified Thu Apr 29 21:54:34 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: implement decisions from the module cull meeting http://wiki.na-mic.org/Wiki/index.php/2010_Slicer36_Module_Cull

Revision 13099  Directory Listing
Modified Thu Apr 29 21:41:24 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: switch to smart pointers to get rid of a memory leak

Revision 13098  Directory Listing
Modified Thu Apr 29 21:30:37 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: adding another test to cover more of the MergeModels CLI

Revision 13097  Directory Listing
Modified Thu Apr 29 21:28:17 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: adding an ascii version of the cube and sphere for testing xml poly data reading

Revision 13096  Directory Listing
Modified Thu Apr 29 21:25:25 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: set default status of scalar volumes to be non-labelmaps explicitly so they will show up in nodeselectors that try to exclude labelmaps by attribute

Revision 13095  Directory Listing
Modified Thu Apr 29 21:23:44 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: don't prompt for new label map when editing  non-scalar volumes

Revision 13094  Directory Listing
Modified Thu Apr 29 21:21:26 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: change the test to a c++ based one and use the helper cmake class to compare the output and the baseline. TODO: get the comparison succeeding, new baseline needed?

Revision 13091  Directory Listing
Modified Thu Apr 29 21:05:45 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: changed modelmirror's category to 'surface models' and added a link to docu.

Revision 13090  Directory Listing
Modified Thu Apr 29 20:37:37 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
BUG: volume was in LPS space, while gradient vectors were still in RAS space.

Revision 13089  Directory Listing
Modified Thu Apr 29 20:22:58 2010 UTC (7 years, 4 months ago) by finetjul
Original Path: trunk
STYLE: Add documentation link for Gaussian Blur module.

Revision 13088  Directory Listing
Modified Thu Apr 29 20:15:12 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: better handling of values out-of-range for lookup table

Revision 13087  Directory Listing
Modified Thu Apr 29 20:13:26 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: don't prompt for new label map when editing  non-scalar volumes

Revision 13086  Directory Listing
Modified Thu Apr 29 20:09:09 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: don't prompt for new label map when editing  non-scalar volumes

Revision 13085  Directory Listing
Modified Thu Apr 29 19:38:21 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: fixed doc url

Revision 13084  Directory Listing
Modified Thu Apr 29 19:35:17 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: update help/ack

Revision 13083  Directory Listing
Modified Thu Apr 29 19:29:40 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: add documentation link for 3.6

Revision 13082  Directory Listing
Modified Thu Apr 29 19:21:56 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed documenation link in the module help frame

Revision 13081  Directory Listing
Modified Thu Apr 29 19:14:53 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: update documentation and ack

Revision 13080  Directory Listing
Modified Thu Apr 29 19:09:43 2010 UTC (7 years, 4 months ago) by francois_budin
Original Path: trunk
BUG:Forgot to add 2 files

Revision 13079  Directory Listing
Modified Thu Apr 29 18:55:53 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
ENH: more meaningful description.

Revision 13078  Directory Listing
Modified Thu Apr 29 17:45:35 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
ENH: fix category (promote from Experimental)

Revision 13075  Directory Listing
Modified Thu Apr 29 16:26:16 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: update documentation link

Revision 13074  Directory Listing
Modified Thu Apr 29 15:59:26 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: update documentation link

Revision 13073  Directory Listing
Modified Thu Apr 29 15:58:49 2010 UTC (7 years, 4 months ago) by francois_budin
Original Path: trunk
BUG:measurement frame with HField transform was not taken into account; problem with transforms when multithreading;improvement of interpolators implementation

Revision 13072  Directory Listing
Modified Thu Apr 29 15:55:27 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
ENH: minor change on help info to reduce confusion.

Revision 13071  Directory Listing
Modified Thu Apr 29 15:53:52 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix links and naming conventions

Revision 13070  Directory Listing
Modified Thu Apr 29 15:46:32 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
ENH: support NRRD. add user selection for output directory.

Revision 13069  Directory Listing
Modified Thu Apr 29 15:45:59 2010 UTC (7 years, 4 months ago) by francois_budin
Original Path: trunk
ENH:Test simplified

Revision 13068  Directory Listing
Modified Thu Apr 29 15:40:06 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix module category

Revision 13067  Directory Listing
Modified Thu Apr 29 15:22:26 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: update link to 3.6 documentation

Revision 13066  Directory Listing
Modified Thu Apr 29 15:19:07 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: update link to point to 3.6 documentation

Revision 13065  Directory Listing
Modified Thu Apr 29 15:03:06 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: adding missing ACPC test of the Realign lib.

Revision 13064  Directory Listing
Modified Thu Apr 29 15:02:15 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
COMP: comparison mismatch warning

Revision 13063  Directory Listing
Modified Thu Apr 29 15:01:16 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: prevent divide by zero (should not happen)

Revision 13062  Directory Listing
Modified Thu Apr 29 14:37:51 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: adding missing test input files for ACPC/Realign test

Revision 13061  Directory Listing
Modified Thu Apr 29 14:29:41 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: update link, contributor

Revision 13057  Directory Listing
Modified Thu Apr 29 13:58:05 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk
ENH: used the new link for the documentation.

Revision 13056  Directory Listing
Modified Thu Apr 29 13:04:16 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: ugh, fixed stupid mistake in the image.

Revision 13055  Directory Listing
Modified Thu Apr 29 12:56:56 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Updating the Welcome module to track changes in Slicer.

Revision 13054  Directory Listing
Modified Thu Apr 29 12:23:08 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix automatic selection of master and merge volume in editor based on what is currently selected in the Red slice window

Revision 13053  Directory Listing
Modified Thu Apr 29 12:10:07 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: Mantis bug 337. Added a null string check on the selected directory

Revision 13052  Directory Listing
Modified Thu Apr 29 12:05:01 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: Mantis bug 337. Loader uses custom browser for adding a data directory. modified to scroll to selected directory

Revision 13051  Directory Listing
Modified Thu Apr 29 11:42:24 2010 UTC (7 years, 4 months ago) by lorensen
Original Path: trunk
ENH: Updated documentation for 3.6 release.

Revision 13050  Directory Listing
Modified Thu Apr 29 03:12:01 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: remove newline

Revision 13049  Directory Listing
Modified Thu Apr 29 02:34:09 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
ENH: documentation points to 3-6.

Revision 13048  Directory Listing
Modified Thu Apr 29 02:25:59 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED: fixed dimensions check in volume renderer

Revision 13047  Directory Listing
Modified Thu Apr 29 01:57:24 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13046  Directory Listing
Modified Thu Apr 29 01:46:17 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: adding help/ack

Revision 13045  Directory Listing
Modified Thu Apr 29 01:44:19 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: adding more testing for Cast, found out that Long wasn't compiled in, so removing it as an option

Revision 13044  Directory Listing
Modified Thu Apr 29 01:43:35 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13043  Directory Listing
Modified Thu Apr 29 01:43:10 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: adding missing test baseline images for the Cast module

Revision 13042  Directory Listing
Modified Thu Apr 29 01:41:52 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13041  Directory Listing
Modified Thu Apr 29 01:36:33 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13040  Directory Listing
Modified Thu Apr 29 01:33:24 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13039  Directory Listing
Modified Thu Apr 29 01:30:59 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13038  Directory Listing
Modified Thu Apr 29 01:30:19 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13037  Directory Listing
Modified Thu Apr 29 01:28:22 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13036  Directory Listing
Modified Thu Apr 29 01:27:06 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13035  Directory Listing
Modified Thu Apr 29 01:25:30 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13034  Directory Listing
Modified Thu Apr 29 01:24:27 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: updating help/ack

Revision 13033  Directory Listing
Modified Thu Apr 29 01:20:39 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13032  Directory Listing
Modified Thu Apr 29 01:18:07 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13031  Directory Listing
Modified Thu Apr 29 01:17:00 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED typo

Revision 13030  Directory Listing
Modified Thu Apr 29 01:16:58 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13029  Directory Listing
Modified Thu Apr 29 01:06:33 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13028  Directory Listing
Modified Thu Apr 29 01:05:37 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13027  Directory Listing
Modified Thu Apr 29 00:48:58 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13026  Directory Listing
Modified Thu Apr 29 00:46:09 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: Trying to fix test. TODO: find last of memory leaks from tcl test. Can't use the regular compare since this outputs a .vtp file, and the cmake compare command doesn't work because Slicer3 doesn't work with the execute_process command as it keeps breaking the pipes

Revision 13025  Directory Listing
Modified Thu Apr 29 00:45:50 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
BUG: Could not load tasks

Revision 13024  Directory Listing
Modified Thu Apr 29 00:44:50 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: cleaning up memory leaks, trying to fix test. TODO: find last of memory leaks from tcl test. Can't use the regular compare since this outputs a .vtp file, and the cmake compare command doesn't work because Slicer3 doesn't work with the execute_process command as it keeps breaking the pipes

Revision 13023  Directory Listing
Modified Thu Apr 29 00:35:49 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13022  Directory Listing
Modified Thu Apr 29 00:33:12 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13021  Directory Listing
Modified Thu Apr 29 00:31:31 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13020  Directory Listing
Modified Thu Apr 29 00:29:46 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13019  Directory Listing
Modified Thu Apr 29 00:27:13 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13018  Directory Listing
Modified Thu Apr 29 00:25:39 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13017  Directory Listing
Modified Thu Apr 29 00:24:02 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13016  Directory Listing
Modified Thu Apr 29 00:22:35 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13015  Directory Listing
Modified Thu Apr 29 00:21:24 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13014  Directory Listing
Modified Thu Apr 29 00:17:26 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13013  Directory Listing
Modified Thu Apr 29 00:15:13 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
BUG: remove newlines

Revision 13012  Directory Listing
Modified Wed Apr 28 23:29:51 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
BUG: Made changes to file so that it would correctly compile

Revision 13011  Directory Listing
Modified Wed Apr 28 23:11:54 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: include estimates from Steve to help the user with target volume estimation

Revision 13010  Directory Listing
Modified Wed Apr 28 23:08:48 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: show warning dialog only once; change the fiducial glyph change behavior
-- set sphere glyph only for those lists that are created through the fast
marching fiducial list node selector

Revision 13007  Directory Listing
Modified Wed Apr 28 22:12:53 2010 UTC (7 years, 4 months ago) by tokuda
Original Path: trunk
ENH: updating help and acknowledgements.

Revision 13006  Directory Listing
Modified Wed Apr 28 22:04:17 2010 UTC (7 years, 4 months ago) by tokuda
Original Path: trunk
ENH: update acknowledgements.

Revision 13005  Directory Listing
Modified Wed Apr 28 22:03:48 2010 UTC (7 years, 4 months ago) by tokuda
Original Path: trunk
ENH: adding acknowledgements. 

Revision 13004  Directory Listing
Modified Wed Apr 28 21:49:30 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
ENH: preparing for release

Revision 13003  Directory Listing
Modified Wed Apr 28 21:48:16 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: renamed output flag to avoid possible conflict

Revision 13002  Directory Listing
Modified Wed Apr 28 21:23:55 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
ENH: logos

Revision 13001  Directory Listing
Modified Wed Apr 28 21:11:50 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: fixing label, default values and category

Revision 12999  Directory Listing
Modified Wed Apr 28 20:59:47 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: incorrect type

Revision 12998  Directory Listing
Modified Wed Apr 28 20:58:38 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: improved documentation, rearranged parameters and fixed spline order type

Revision 12994  Directory Listing
Modified Wed Apr 28 20:41:44 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk
BUG: asked to search for module "OpenIGTLink IF" not "OpenIGTLinkIF".

Revision 12993  Directory Listing
Modified Wed Apr 28 20:32:09 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: usability: wise old users were getting confused between which icon meant mouse-pick and mouse-place. Hopefully these are clearer now.

Revision 12992  Directory Listing
Modified Wed Apr 28 20:27:35 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
ENH: allow newlines to be explicitly put in the description field so that documentation can be formatted into paragraphs

Revision 12991  Directory Listing
Modified Wed Apr 28 20:19:27 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
ENH: formatting of generated documentation

Revision 12990  Directory Listing
Modified Wed Apr 28 20:04:57 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
ENH: IBM source code for ARRA project called EMSegmenter

Revision 12989  Directory Listing
Modified Wed Apr 28 19:58:30 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
ENH: spacing in displayed documentation

Revision 12988  Directory Listing
Modified Wed Apr 28 19:55:57 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
ENH: IBM source code for ARRA project called Annotation

Revision 12987  Directory Listing
Modified Wed Apr 28 19:55:02 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
ENH: IBM source code for ARRA project called Annotation

Revision 12986  Directory Listing
Modified Wed Apr 28 19:50:27 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
ENH: tests

Revision 12985  Directory Listing
Modified Wed Apr 28 19:50:07 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
ENH: documentation

Revision 12981  Directory Listing
Modified Wed Apr 28 19:26:56 2010 UTC (7 years, 4 months ago) by hliu
Original Path: trunk
ENH: added Testing.

Revision 12980  Directory Listing
Modified Wed Apr 28 19:14:09 2010 UTC (7 years, 4 months ago) by lorensen
Original Path: trunk
ENH: Update doc to 3.6.

Revision 12979  Directory Listing
Modified Wed Apr 28 19:12:17 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
ENH: Test working now.

Revision 12978  Directory Listing
Modified Wed Apr 28 18:55:50 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: reorganization of the parameters; filled in help and acks; updated
testing to use the new parameter flags

Revision 12977  Directory Listing
Modified Wed Apr 28 18:29:21 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
ENH: documentation for the release

Revision 12976  Directory Listing
Modified Wed Apr 28 18:28:19 2010 UTC (7 years, 4 months ago) by millerjv
Original Path: trunk
ENH: added some tests of the AffineRegistration

Revision 12975  Directory Listing
Modified Wed Apr 28 18:14:04 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: adding data for the N4 test

Revision 12974  Directory Listing
Modified Wed Apr 28 18:12:49 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: adding test for N4 bias field correction

Revision 12973  Directory Listing
Modified Wed Apr 28 17:52:22 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: incorrect initial value of the parameter caused wrong algorithm
initialization and overfitting

Revision 12972  Directory Listing
Modified Wed Apr 28 17:49:07 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: code cleanup

Revision 12971  Directory Listing
Modified Wed Apr 28 16:12:14 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: cleanup and build the module as a shared library

Revision 12968  Directory Listing
Modified Wed Apr 28 15:30:11 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
ENH: extra testing infrastructure and testing for Editor

Revision 12967  Directory Listing
Modified Wed Apr 28 14:47:40 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
BUG: forcing RAS on GE data was not doing correctly. Going back to LPS for all vendors.

Revision 12966  Directory Listing
Modified Wed Apr 28 13:52:57 2010 UTC (7 years, 4 months ago) by pkarasev
Original Path: trunk
BUG: scale color map, handle lack-of-input-vertices, attempt to run contour seg if vertices are given

Revision 12965  Directory Listing
Modified Wed Apr 28 13:38:41 2010 UTC (7 years, 4 months ago) by finetjul
Original Path: trunk
STYLE: Add more docs (help+acknowledgment) to camera module

Revision 12964  Directory Listing
Modified Wed Apr 28 12:53:21 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: getting rid of gdcm warnings by linking with ITKIO

Revision 12963  Directory Listing
Modified Wed Apr 28 12:23:23 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: cleaning up leaks for load sample data. sloppy me. still working on the callback for this option

Revision 12962  Directory Listing
Modified Wed Apr 28 11:30:08 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: at last! added file menu hook for adding sample data. command callback not yet tested/hooked up

Revision 12961  Directory Listing
Modified Wed Apr 28 00:57:37 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED: fixed typo

Revision 12960  Directory Listing
Modified Wed Apr 28 00:32:00 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: check for bad call to GetName for incorrectly registered MRML Nodes

Revision 12959  Directory Listing
Modified Wed Apr 28 00:06:57 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix calling sequence for use with ctest

Revision 12958  Directory Listing
Modified Wed Apr 28 00:05:16 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: check if viewer exists before requesting render

Revision 12957  Directory Listing
Modified Tue Apr 27 23:09:22 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: fixing a memory leak, had extra storage nodes leaking from nodes that already had them. Also added check to make sure save dialog is created before calling anything on it

Revision 12956  Directory Listing
Modified Tue Apr 27 22:46:13 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: for bug 818, add a version number to the fiducial file as well and try to make sure that we're using the correct symbol when load in fids from mrml and from files

Revision 12955  Directory Listing
Modified Tue Apr 27 22:40:17 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: bypass vtkMRMLScene::GetNodesByName method because it seems it cannot be called from Tcl without leading to a leak

Revision 12954  Directory Listing
Modified Tue Apr 27 21:37:21 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH: do not allow single slice volumes selection in VolumeRendering. It causes crash.

Revision 12953  Directory Listing
Modified Tue Apr 27 21:31:38 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix some leaks in test and clean up code

Revision 12952  Directory Listing
Modified Tue Apr 27 20:41:22 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
ENH: default parameters for methods

Revision 12951  Directory Listing
Modified Tue Apr 27 20:07:51 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
ENH: add test for new editor interface

Revision 12950  Directory Listing
Modified Tue Apr 27 19:47:04 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH: added reference VolView transfer functions

Revision 12949  Directory Listing
Modified Tue Apr 27 19:39:38 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH: added VolView transfer functions

Revision 12948  Directory Listing
Modified Tue Apr 27 19:34:48 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
ENH: to address bugs related to bad registration results for EMSegmenter and other project enable BRAINS tools by default

Revision 12946  Directory Listing
Modified Tue Apr 27 17:24:11 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: changing 'Tumor Mask' to 'VOI Mask' as per Ron's request, fixing bug in computing that was tabling results for VOIs with no voxels in them, and tried to address warnings in Logic from gdcm (i think it worked...)

Revision 12945  Directory Listing
Modified Tue Apr 27 17:14:30 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix crash when adding multiple structures, and add test to search for leaks

Revision 12944  Directory Listing
Modified Tue Apr 27 00:02:07 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
COMP:  Syncronized with BRAINS3 build suite so that maintenance will be easier.  STYLE:  Improved command line documentation in Slicer3.

Revision 12940  Directory Listing
Modified Mon Apr 26 23:12:34 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: adding CLI wrapping N4ITK algorithm, see Insight Journal publication 640:
Tustison N, Gee J "N4ITK: Nick's N3 ITK Implementation for MRI Bias Field
Correction", http://hdl.handle.net/10380/3053

Revision 12939  Directory Listing
Modified Mon Apr 26 20:29:07 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix installers for BRAINS command line modules

Revision 12938  Directory Listing
Modified Mon Apr 26 19:44:20 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG adding plot infrastructure which is stubbed out...

Revision 12937  Directory Listing
Modified Mon Apr 26 19:43:50 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing crashing bug when non-PET volume is selected as pet volume by checking for null pointer. Also adding plotting infrastructure which is currently stubbed out

Revision 12936  Directory Listing
Modified Mon Apr 26 18:52:18 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
COMP: fix windows build for BRAINSCommonLib library

Revision 12935  Directory Listing
Modified Mon Apr 26 18:15:07 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fixes for bugs reported in http://www.na-mic.org/Bug/view.php?id=689 and STYLE: clean up dead code

Revision 12934  Directory Listing
Modified Mon Apr 26 17:31:21 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
STYLE: downgrade some of the warnings and errors to debug print outs as the code recovers from the error states gracefully

Revision 12933  Directory Listing
Modified Mon Apr 26 16:53:33 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: avoid errors when trying to look at module variables that have no contents

Revision 12932  Directory Listing
Modified Mon Apr 26 16:52:37 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: fix unitialized variable

Revision 12931  Directory Listing
Modified Mon Apr 26 15:59:19 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: getting LUT labels to appear with icons as in colors module, Ron's request

Revision 12930  Directory Listing
Modified Mon Apr 26 15:45:27 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
STYLE: changed xml to be 3.6 ready.

Revision 12929  Directory Listing
Modified Mon Apr 26 15:21:33 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed color LUT icons, Ron's request. not yet exposed in volumes GUI

Revision 12928  Directory Listing
Modified Mon Apr 26 15:18:53 2010 UTC (7 years, 4 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: sorting out the color LUT icons requested by Ron

Revision 12927  Directory Listing
Modified Mon Apr 26 14:31:14 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
ENH: allow selective disabling of all scripted modules

Revision 12926  Directory Listing
Modified Mon Apr 26 14:30:00 2010 UTC (7 years, 4 months ago) by taox
Original Path: trunk
STYLE: fixed a few typos.

Revision 12925  Directory Listing
Modified Mon Apr 26 13:19:07 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: tweak GUI per request from Ron

Revision 12924  Directory Listing
Modified Mon Apr 26 11:45:27 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: change name and position of volume check point enable button to save space

Revision 12923  Directory Listing
Modified Mon Apr 26 11:01:53 2010 UTC (7 years, 4 months ago) by casey.goodlett
Original Path: trunk
COMP: Accidently entered wrong filename for RegisterImagesMultiRes test baseline.

Revision 12922  Directory Listing
Modified Mon Apr 26 10:58:28 2010 UTC (7 years, 4 months ago) by casey.goodlett
Original Path: trunk
BUG: Used wrong commands for RegisterImageMultiRes test tolerance.

Revision 12921  Directory Listing
Modified Mon Apr 26 05:33:58 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
ENH: IBM GUI interface finished

Revision 12920  Directory Listing
Modified Mon Apr 26 03:13:11 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
ENH:  First submission to include the suite of BRAINS registraiton tools to Slicer3.  All the test tree has been removed (due to the large size of the regression test data that is usually included.

Revision 12919  Directory Listing
Modified Sun Apr 25 22:46:20 2010 UTC (7 years, 4 months ago) by casey.goodlett
Original Path: trunk
BUG: Adjust tolerance for register images test.  Getting different
results for linux and windows but both seem reasonable.

Revision 12918  Directory Listing
Modified Sun Apr 25 21:23:00 2010 UTC (7 years, 4 months ago) by casey.goodlett
Original Path: trunk
BUG: Fix segfault when not using region of interest in RegisterImagesMultiRes

Revision 12917  Directory Listing
Modified Sun Apr 25 21:22:56 2010 UTC (7 years, 4 months ago) by casey.goodlett
Original Path: trunk
ENH: Use compression in output for RegisterImagesMultiRes

Revision 12916  Directory Listing
Modified Sun Apr 25 21:22:52 2010 UTC (7 years, 4 months ago) by casey.goodlett
Original Path: trunk
ENH: Add test for register images multi-res.

Revision 12915  Directory Listing
Modified Sun Apr 25 19:52:06 2010 UTC (7 years, 4 months ago) by hjohnson
Original Path: trunk
COMP: Added license.

Revision 12914  Directory Listing
Modified Sun Apr 25 19:02:05 2010 UTC (7 years, 4 months ago) by vrnova
Original Path: trunk
ENH: GMOM rendering in multi-volume gpu ray casting. GUI updated.

Revision 12913  Directory Listing
Modified Sun Apr 25 14:51:59 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED: fixed memory leak in ModelTransform 

Revision 12912  Directory Listing
Modified Sun Apr 25 14:14:49 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH: fixed vvt to mrml converter

Revision 12911  Directory Listing
Modified Sat Apr 24 22:31:26 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
STYLE: update documentation link and PI info

Revision 12910  Directory Listing
Modified Sat Apr 24 22:30:26 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
STYLE: update documentation link and PI info

Revision 12909  Directory Listing
Modified Sat Apr 24 21:56:12 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED fixed warnings and leaks in ModelTransform

Revision 12908  Directory Listing
Modified Sat Apr 24 21:49:10 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: added basic test of PichonFastMarching filter. To be extended

Revision 12907  Directory Listing
Modified Sat Apr 24 21:22:07 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
COMP: trying to fix linker error

Revision 12906  Directory Listing
Modified Sat Apr 24 20:47:13 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: did not commit change to the header

Revision 12905  Directory Listing
Modified Sat Apr 24 20:27:23 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: incorrect dependency library name

Revision 12904  Directory Listing
Modified Sat Apr 24 20:16:08 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: fix memory leak

Revision 12903  Directory Listing
Modified Sat Apr 24 19:50:49 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH added wrappable API

Revision 12902  Directory Listing
Modified Sat Apr 24 19:49:45 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH: parser for vvt files

Revision 12901  Directory Listing
Modified Sat Apr 24 19:13:33 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: adding more tests

Revision 12900  Directory Listing
Modified Sat Apr 24 19:12:59 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: adding data for changetracker testing

Revision 12899  Directory Listing
Modified Sat Apr 24 18:46:16 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
ENH: Functions needed for displaying  Intensity Distribution Graph

Revision 12898  Directory Listing
Modified Sat Apr 24 18:42:13 2010 UTC (7 years, 4 months ago) by pohl
Original Path: trunk
ENH: New IBM extension - interface for  Intensity Distribution Graph

Revision 12897  Directory Listing
Modified Sat Apr 24 14:47:21 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH: bug 574: added Model Transform module

Revision 12896  Directory Listing
Modified Sat Apr 24 14:46:58 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
ENH: bug 574: added Model Transform module

Revision 12895  Directory Listing
Modified Fri Apr 23 22:46:41 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: set the label node

Revision 12894  Directory Listing
Modified Fri Apr 23 22:33:19 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
ENH: update documentation link

Revision 12893  Directory Listing
Modified Fri Apr 23 22:30:48 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: 793 - fixes to make workflow cleaner

Revision 12892  Directory Listing
Modified Fri Apr 23 21:58:03 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
STYLE: remove console output

Revision 12891  Directory Listing
Modified Fri Apr 23 21:57:24 2010 UTC (7 years, 4 months ago) by fedorov
Original Path: trunk
BUG: set the right color map for the labels

Revision 12890  Directory Listing
Modified Fri Apr 23 19:51:28 2010 UTC (7 years, 4 months ago) by ibanez
Original Path: trunk
ENH: Exclude GUI-related files from computation of code coverage.

Revision 12889  Directory Listing
Modified Fri Apr 23 19:20:26 2010 UTC (7 years, 4 months ago) by lorensen
Original Path: trunk
ENH: updated docs for 3.6

Revision 12888  Directory Listing
Modified Fri Apr 23 19:16:33 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: 820 delete and undo was messing with the mapping between fiducial ids and seed widget seeds, this should fix it

Revision 12887  Directory Listing
Modified Fri Apr 23 19:10:21 2010 UTC (7 years, 4 months ago) by lorensen
Original Path: trunk
ENH: updated docs for 3.6

Revision 12886  Directory Listing
Modified Fri Apr 23 18:53:36 2010 UTC (7 years, 4 months ago) by lorensen
Original Path: trunk
ENH: updated docs for 3.6

Revision 12885  Directory Listing
Modified Fri Apr 23 17:53:42 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: for bug 793, don't show the editor tools if no label map exists yet

Revision 12884  Directory Listing
Modified Fri Apr 23 17:20:18 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
STYLE: use this pointer

Revision 12883  Directory Listing
Modified Fri Apr 23 17:19:54 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
ENH: accessor method

Revision 12882  Directory Listing
Modified Fri Apr 23 16:37:41 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: work in progress for bug 793

Revision 12881  Directory Listing
Modified Fri Apr 23 16:12:45 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
STYLE: updating help and ack frame

Revision 12878  Directory Listing
Modified Fri Apr 23 12:47:15 2010 UTC (7 years, 4 months ago) by partyd
Original Path: trunk
ENH: update SuperBuild to also use ITK-3-18.

Revision 12877  Directory Listing
Modified Thu Apr 22 22:58:30 2010 UTC (7 years, 4 months ago) by alexy
Original Path: trunk
BUG_FIXED: made volume rendering work with label maps

Revision 12873  Directory Listing
Modified Thu Apr 22 21:42:21 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: remove testing for fix of bug 240

Revision 12872  Directory Listing
Modified Thu Apr 22 21:40:38 2010 UTC (7 years, 4 months ago) by naucoin
Original Path: trunk
BUG: 240 collapse the path when reading in a file name from mrml, this avoids problems with symlinks in relative paths (vtksys::SystemTools::FileIsSymlink doesn't detect them)

Revision 12871  Directory Listing
Modified Thu Apr 22 21:00:26 2010 UTC (7 years, 4 months ago) by pieper
Original Path: trunk
BUG: take transforms into account when calculating the slice spacing to be used by the slice slider and the left/right keyboard accelerators

Revision 12870  Directory Listing
Modified Thu Apr 22 20:28:20 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: use INT rather than LONG for label map type

Revision 12868  Directory Listing
Modified Thu Apr 22 13:56:32 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: for bug 731, add option to load data from current working directory

Revision 12867  Directory Listing
Modified Thu Apr 22 13:46:58 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: for bug 731, add option to switch file browser to current working directory

Revision 12866  Directory Listing
Modified Thu Apr 22 06:22:47 2010 UTC (7 years, 5 months ago) by pkarasev
Original Path: trunk
COMP: add test and reference data for SFLS CLI module . Remaining issue: CTest support for vtkXMLPolyData input ?


Revision 12865  Directory Listing
Modified Wed Apr 21 22:38:54 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: get slicer compiling again, move method so not protected

Revision 12864  Directory Listing
Modified Wed Apr 21 22:16:42 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid slowdowns when using editor paint tools by turning off corner annotations for 300ms on every mouse move.  Use unified set of methods in the superclass (SWidget) so that additional cases can be added if needed for performance (such as turning off fiducial labels)

Revision 12863  Directory Listing
Modified Wed Apr 21 22:14:28 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid calling updates on the event queue, even if only to provide feedback to the user.  When called from inside progress events or other inner loops this can lead to recursive invocations of the event loop and bad byproducts

Revision 12862  Directory Listing
Modified Wed Apr 21 22:03:46 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: 497 set the modified since read flag if the file was deleted on reading in, so CLI outputs will come up as needing to be saved in the save data widget

Revision 12860  Directory Listing
Modified Wed Apr 21 21:21:40 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: 781 support fiducials in the 3d view

Revision 12859  Directory Listing
Modified Wed Apr 21 20:49:29 2010 UTC (7 years, 5 months ago) by lorensen
Original Path: trunk
ENH: updated docs for 3.6

Revision 12858  Directory Listing
Modified Wed Apr 21 20:44:02 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: selecting presets should update volumes GUI (win/lev/thresh range widgets) via a direct call to method UpdateFramesFromMRML() on the VOlumesGUI. This had been a private method, so I had to expose it.

Revision 12853  Directory Listing
Modified Wed Apr 21 19:29:27 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: need to set the mrml scene so can set up events in the Create call on the fiducial list widget

Revision 12852  Directory Listing
Modified Wed Apr 21 19:16:01 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
BUG: fix install rule for packaging in Qt libraries on Linux when Slicer3_USE_QT is enabled.

Revision 12851  Directory Listing
Modified Wed Apr 21 18:42:46 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: update to ITK 3.18 - fixes multithreaded bulk transform bspline resampling issue and removes possibly GPL code from distribution. Also speeds up DICOM parsing.

Revision 12850  Directory Listing
Modified Wed Apr 21 18:41:51 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: updated colour files from the oneline generator, as per Ron's request

Revision 12849  Directory Listing
Modified Wed Apr 21 18:38:48 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: rename of colour files as per Ron's request

Revision 12848  Directory Listing
Modified Wed Apr 21 18:19:21 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: use more approriate 2d glyphs for the 3d sphere and diamond (circle and diamond)

Revision 12847  Directory Listing
Modified Tue Apr 20 22:58:35 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: fixing a memory leak when add a fiducial list from file

Revision 12846  Directory Listing
Modified Tue Apr 20 22:44:15 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: reset the default ruler widget position to span the bounding box

Revision 12845  Directory Listing
Modified Tue Apr 20 22:43:19 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: trying to reduce compiler warnings, float/double

Revision 12844  Directory Listing
Modified Tue Apr 20 22:14:57 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: 166 if a bool parameter doesn't have a default, need to set it to false. Updated execution model tour to have a non default boolean arg

Revision 12843  Directory Listing
Modified Tue Apr 20 22:13:36 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: remove warning about needing brackets for disambiguation

Revision 12842  Directory Listing
Modified Tue Apr 20 21:10:29 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: make the test succeed if it can't find the modules it need to fully test

Revision 12841  Directory Listing
Modified Tue Apr 20 20:29:57 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: show that can select multiple input files

Revision 12840  Directory Listing
Modified Tue Apr 20 20:18:33 2010 UTC (7 years, 5 months ago) by lorensen
Original Path: trunk
ENH: updated docs for 3.6

Revision 12839  Directory Listing
Modified Tue Apr 20 20:01:39 2010 UTC (7 years, 5 months ago) by lorensen
Original Path: trunk
ENH: Added executable for CheckerBoard.

Revision 12838  Directory Listing
Modified Tue Apr 20 20:01:04 2010 UTC (7 years, 5 months ago) by lorensen
Original Path: trunk
ENH: updated docs for 3.6

Revision 12833  Directory Listing
Modified Tue Apr 20 17:30:17 2010 UTC (7 years, 5 months ago) by lorensen
Original Path: trunk
ENH: Improved documentation.

Revision 12832  Directory Listing
Modified Tue Apr 20 16:56:53 2010 UTC (7 years, 5 months ago) by lorensen
Original Path: trunk
BUG: input must be signed. ENH: Better documentation.

Revision 12830  Directory Listing
Modified Tue Apr 20 16:39:01 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix unzipping of extensions (ensure that target directory exists)

Revision 12828  Directory Listing
Modified Tue Apr 20 15:54:48 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: 792 set the editor default lut to the new short one

Revision 12827  Directory Listing
Modified Tue Apr 20 15:50:56 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix for issue 816, missing file

Revision 12825  Directory Listing
Modified Tue Apr 20 04:58:27 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
ENH: Changes to interface with IBM Source code

Revision 12824  Directory Listing
Modified Tue Apr 20 04:55:22 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
STYLE: Made changes to EMSMRML architecture so that it would be wrapped by Tcl

Revision 12822  Directory Listing
Modified Mon Apr 19 23:03:53 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
BUG: fix bug -- registration class is not called from Transpeineal device mode

Revision 12821  Directory Listing
Modified Mon Apr 19 22:53:13 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: remove a commented out line

Revision 12820  Directory Listing
Modified Mon Apr 19 22:01:39 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
COMP: fix build warning (conversion from double to float)

Revision 12819  Directory Listing
Modified Mon Apr 19 22:00:21 2010 UTC (7 years, 5 months ago) by ibanez
Original Path: trunk
ENH: Added LONG and ULONG tests to the Applications/CLI/Add test.

Revision 12818  Directory Listing
Modified Mon Apr 19 21:59:16 2010 UTC (7 years, 5 months ago) by ibanez
Original Path: trunk
ENH: Adding baseline images for the Applications/CLI/Add module

Revision 12817  Directory Listing
Modified Mon Apr 19 21:56:17 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: allow user to cancel making a ruler, move the fiducial list widget events into the list widget CreateWidget method

Revision 12815  Directory Listing
Modified Mon Apr 19 21:50:29 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: remove commented out line

Revision 12814  Directory Listing
Modified Mon Apr 19 21:43:07 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
BUG: fix Z-frame registration error due to a bug in newmat/ZLinAlg.cxx

Revision 12809  Directory Listing
Modified Mon Apr 19 20:42:35 2010 UTC (7 years, 5 months ago) by ibanez
Original Path: trunk
ENH: Adding input images for testing Application/CLI modules with multiple pixel types.

Revision 12808  Directory Listing
Modified Mon Apr 19 20:31:43 2010 UTC (7 years, 5 months ago) by ibanez
Original Path: trunk
ENH: Adding tests for all the pixel types of the Applications/CLI/Add module.

Revision 12807  Directory Listing
Modified Mon Apr 19 20:30:50 2010 UTC (7 years, 5 months ago) by ibanez
Original Path: trunk
ENH: Changing the mime-type of these file to make them binary.

Revision 12806  Directory Listing
Modified Mon Apr 19 20:29:04 2010 UTC (7 years, 5 months ago) by ibanez
Original Path: trunk
ENH: Adding baseline images for the tests of the Application/CLI/Add.cxx module.

Revision 12805  Directory Listing
Modified Mon Apr 19 20:15:27 2010 UTC (7 years, 5 months ago) by ibanez
Original Path: trunk
ENH: Adding a basic image in all the pixel types in order to provide exhaustive testing of CLI modules.

Revision 12804  Directory Listing
Modified Mon Apr 19 19:28:45 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: 792 use the new brain lut as the default

Revision 12803  Directory Listing
Modified Mon Apr 19 18:23:51 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
ENH: adding test to OpenIGTLinkIF module.

Revision 12802  Directory Listing
Modified Mon Apr 19 18:07:38 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
BUG:Remove duplicated typedef

Revision 12801  Directory Listing
Modified Mon Apr 19 18:01:30 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: 792 new default label volume colours

Revision 12800  Directory Listing
Modified Mon Apr 19 17:53:40 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: always check for the current color node in the red slice label volume, as it may change

Revision 12799  Directory Listing
Modified Mon Apr 19 15:19:11 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: check to make sure the slice gui exists befor calling GetSlicerViewer, since it was causing errors and leaks on exit with a ruler in the scene

Revision 12798  Directory Listing
Modified Mon Apr 19 15:11:50 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: request a render after deleting a widget from the 3d scene

Revision 12797  Directory Listing
Modified Mon Apr 19 14:34:36 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: compiler warning, init variable to null

Revision 12796  Directory Listing
Modified Mon Apr 19 14:31:43 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: get rid of compiler warnings

Revision 12795  Directory Listing
Modified Mon Apr 19 06:54:43 2010 UTC (7 years, 5 months ago) by pkarasev
Original Path: trunk
BUG: crash with data improperly saved, port over tested code from standalone executable

Revision 12794  Directory Listing
Modified Sat Apr 17 18:30:37 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG_FIXED: 456
Update window, threshold ranges based on image range every time the image is modified.

Revision 12791  Directory Listing
Modified Sat Apr 17 16:12:43 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG_FIXED: 744
Remove unreferenced storage and display nodes before saving a scene

Revision 12790  Directory Listing
Modified Sat Apr 17 00:04:57 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: remove compiler warning, brackets

Revision 12789  Directory Listing
Modified Sat Apr 17 00:00:28 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: bring the angle widget in line with the ruler widget

Revision 12788  Directory Listing
Modified Fri Apr 16 22:13:17 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: adding _64 to build name broke the extension download URL.  No need to add _64 because all osx slicer builds at 64 bit - see  http://en.wikipedia.org/wiki/X86-64#Mac_OS_X

Revision 12787  Directory Listing
Modified Fri Apr 16 21:47:44 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: fix bug where visib toggle would stop ruler from responding to events. Reset the gui when nodes are removed. Use comma or tab in report. Cleaned up the GUI

Revision 12786  Directory Listing
Modified Fri Apr 16 20:55:55 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: for issu 787 to allow launching of downloaded CLI extensions using --launch

Revision 12785  Directory Listing
Modified Fri Apr 16 20:21:52 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: workaround for issu 802 - now only try to build python for windows when using visual studio 2008 professional (this is the only version officially supported by the python project)

Revision 12784  Directory Listing
Modified Fri Apr 16 19:22:21 2010 UTC (7 years, 5 months ago) by vrnova
Original Path: trunk
ENH: MIP+MIP mode in multi-volume rendering

Revision 12783  Directory Listing
Modified Fri Apr 16 18:17:03 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fixes to avoid warnings in vtk 5.6

Revision 12782  Directory Listing
Modified Fri Apr 16 17:44:07 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix update of crosshairs when panning and zooming in a slice

Revision 12780  Directory Listing
Modified Fri Apr 16 17:15:03 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: turn off that pesky corner annotation for better interactive performance while navigating

Revision 12779  Directory Listing
Modified Fri Apr 16 17:10:22 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: 815 - make crosshair mode interact nicely with other SWidgets

Revision 12778  Directory Listing
Modified Fri Apr 16 15:43:04 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix behavior for detecting if ruler is on a slice

Revision 12777  Directory Listing
Modified Fri Apr 16 15:22:38 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fixes for bug 760 (2D ruler visibility and color and delete behavior)

Revision 12776  Directory Listing
Modified Fri Apr 16 15:07:53 2010 UTC (7 years, 5 months ago) by casey.goodlett
Original Path: trunk
BUG: Add locally modified box spatial object to resolve mantis 789.

This is to workaround using an unstable version of ITK for this one
fix.  This should be reverted when ITK is updated (to the release after 3.18)

Revision 12775  Directory Listing
Modified Fri Apr 16 13:45:53 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix wording of multi-frame dicom warning and invalid geometry warning per suggestion by Andras

Revision 12774  Directory Listing
Modified Fri Apr 16 12:32:06 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: explicitly turn off fortran compilation on linux builds of numpy (can lead to incompatible shared libraries depending on g77/gfortran installation differences)

Revision 12773  Directory Listing
Modified Fri Apr 16 02:13:45 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
BUG: remove mouse event observers if the module is exited while in ROI
selection step

Revision 12772  Directory Listing
Modified Fri Apr 16 01:34:01 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
ENH: remove selector for scan2 segmentation

Revision 12771  Directory Listing
Modified Thu Apr 15 21:46:51 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
BUG:Tells you that you cannot use a deformation field and a BSpline with a bulk transform at the same time

Revision 12770  Directory Listing
Modified Thu Apr 15 21:43:55 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
ENH:Addition of a bulk transform for BSpline

Revision 12769  Directory Listing
Modified Thu Apr 15 21:11:42 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: detect multi-frame dicoms explicitly and flag them.  Also change from italic font for warnings for better readability

Revision 12768  Directory Listing
Modified Thu Apr 15 21:05:50 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
STYLE: Removed additional print outs 

Revision 12767  Directory Listing
Modified Thu Apr 15 21:04:24 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix for parsing dicom headers with unprintable characters (avoids a cache problem on windows)

Revision 12766  Directory Listing
Modified Thu Apr 15 19:00:25 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: explicitly pick a python revision number to deal with fallout from python issue 4120 where they patched the release branch to change the way manifests are dealt with (a very major change that broke backwards compatibilty and should /not/ have been done IMHO). http://bugs.python.org/issue4120 http://svn.python.org/view/python/branches/release26-maint/Lib/distutils/msvc9compiler.py?r1=68082&r2=76652&pathrev=76652

Revision 12765  Directory Listing
Modified Thu Apr 15 18:55:17 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: additional python paths for missing libraries

Revision 12764  Directory Listing
Modified Thu Apr 15 18:54:37 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: additional diagnostics for python startup

Revision 12763  Directory Listing
Modified Thu Apr 15 18:54:02 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: initialize variable

Revision 12762  Directory Listing
Modified Thu Apr 15 18:53:34 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
ENH: additional diagnostics in case python console does not start

Revision 12761  Directory Listing
Modified Thu Apr 15 18:25:52 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
ENH:Addition of a bulk transform for BSpline

Revision 12760  Directory Listing
Modified Thu Apr 15 13:56:34 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix issues from bug 810

Revision 12759  Directory Listing
Modified Wed Apr 14 22:00:07 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: return const references to the internal members of the structure so that when accessor methods return c_str const char pointers to the strings they will point to valid memory (without the references a copy of the string is created on the stack and it goes out of scope when the accessor method returns)

Revision 12754  Directory Listing
Modified Wed Apr 14 17:48:54 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: adjust the glyph type when it's read in from older mrml files before the change to the glyph type enum (from versions older than 12553 or that don't have versions)

Revision 12752  Directory Listing
Modified Wed Apr 14 17:28:46 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: the color module needs to be called to update the active viewer widget, fixes a crash when loading a scene while in the Colors module

Revision 12751  Directory Listing
Modified Wed Apr 14 16:29:05 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
BUG: Would not compile on Ubuntu 9.10 bc it could not find vector.h

Revision 12750  Directory Listing
Modified Wed Apr 14 16:03:37 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
ENH: Included more plugins for IBM source code

Revision 12749  Directory Listing
Modified Wed Apr 14 15:41:32 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: stubbing out colorLUT icons temporarily

Revision 12748  Directory Listing
Modified Wed Apr 14 15:37:08 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: new SPECTRE jar fixes path problem

Revision 12744  Directory Listing
Modified Tue Apr 13 20:48:31 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: change the key binding for new measurement, R was resetting the slice view

Revision 12743  Directory Listing
Modified Tue Apr 13 19:56:32 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding color LUT images to colors module

Revision 12742  Directory Listing
Modified Tue Apr 13 19:55:30 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding resources for Color LUTs

Revision 12741  Directory Listing
Modified Tue Apr 13 19:54:41 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding image data for color LUTs

Revision 12740  Directory Listing
Modified Tue Apr 13 18:19:07 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG_FIXED 807: In the Slicer3MinuteScene in the Layout node ViewArrangement is set to -1.
In the current slicer version valid arrangements start with 0. Fixed node reader to convert -1 to 0.

Revision 12724  Directory Listing
Modified Tue Apr 13 15:19:58 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
BUG: fix the scene pointer (bug 809)

Revision 12723  Directory Listing
Modified Tue Apr 13 15:11:45 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
ENH: add null pointer check to prevent the crash (bug 809)

Revision 12722  Directory Listing
Modified Tue Apr 13 02:18:47 2010 UTC (7 years, 5 months ago) by lassoan
Original Path: trunk
COMP: Removed linux compilation warnings in ProstateNav

Revision 12721  Directory Listing
Modified Mon Apr 12 23:36:42 2010 UTC (7 years, 5 months ago) by lassoan
Original Path: trunk
BUG: ProstateNav module fixes (memory leaks, compatibility with transformed images, models, fiducials, etc.)

Revision 12720  Directory Listing
Modified Mon Apr 12 21:13:25 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix for bug 804 (bad symbol name)

Revision 12719  Directory Listing
Modified Mon Apr 12 20:52:05 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: check for validity of dicom geometry in all series (don't just stop after finding the first series with invalid geometry)

Revision 12718  Directory Listing
Modified Mon Apr 12 20:47:18 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix situation where non-displayable characters in patient,study,series,file names could confuse internals of file loader - also allow cancel button to unwedge dialog

Revision 12717  Directory Listing
Modified Mon Apr 12 18:54:34 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid memory leaks caused by update of incomplete scene during scene close

Revision 12716  Directory Listing
Modified Mon Apr 12 16:50:46 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing the linked control in side-by-side compare view

Revision 12715  Directory Listing
Modified Mon Apr 12 16:11:56 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
BUG: make the sun compiler happy (compile error discovered by Attila)

Revision 12714  Directory Listing
Modified Mon Apr 12 15:28:21 2010 UTC (7 years, 5 months ago) by lassoan
Original Path: trunk
BUG: Fix for 0000756 (Incorrect coordinate values displayed in the status bar) by displaying slice index next to the slice selection slider.

Revision 12713  Directory Listing
Modified Mon Apr 12 15:17:37 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: fixing std vector include

Revision 12711  Directory Listing
Modified Sat Apr 10 03:03:08 2010 UTC (7 years, 5 months ago) by lassoan
Original Path: trunk
BUG: Various stability fixes (properly handle transformed images, update the volume selection when a new node is added, display full needle trajectory, fix verification clear function)

Revision 12710  Directory Listing
Modified Sat Apr 10 02:36:28 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
ENH: Interface with IBM source code

Revision 12709  Directory Listing
Modified Sat Apr 10 02:36:01 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
ENH: Interface with IBM source code

Revision 12708  Directory Listing
Modified Sat Apr 10 02:34:36 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
ENH: Create Interface to IBM source code

Revision 12707  Directory Listing
Modified Sat Apr 10 02:33:48 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
STYLE: Changed layout of Step

Revision 12706  Directory Listing
Modified Sat Apr 10 02:33:03 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
STYLE: Changed layout of Step

Revision 12705  Directory Listing
Modified Fri Apr 9 19:17:02 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG_FIXED: 805
Remove non-unique check in node renaming since it was causing problems

Revision 12704  Directory Listing
Modified Fri Apr 9 16:18:42 2010 UTC (7 years, 5 months ago) by lassoan
Original Path: trunk
BUG: Fixed calibration algorithm (code line was restored that had been previously removed when fixing compilation warnings)

Revision 12703  Directory Listing
Modified Fri Apr 9 15:35:52 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: removing double/int warnings

Revision 12702  Directory Listing
Modified Fri Apr 9 14:04:04 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG_FIXED 763:
fixed the case when display widgets get stuck in no update flag

Revision 12701  Directory Listing
Modified Fri Apr 9 06:06:20 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
ENH: Added interface to plug in IBM source code

Revision 12700  Directory Listing
Modified Fri Apr 9 06:02:03 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
STYLE: Just changed how ProbImageData is shown in PrintSelf

Revision 12699  Directory Listing
Modified Fri Apr 9 05:24:41 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
BUG: rolled back to bad revision in last commit - so I rolled back again to r9240 and only included bug fixes 

Revision 12697  Directory Listing
Modified Thu Apr 8 22:15:04 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: a compiler was complaining about getting to the end of a non void fn

Revision 12696  Directory Listing
Modified Thu Apr 8 22:02:20 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: getting rid of uninit var, casting compiler warnings

Revision 12695  Directory Listing
Modified Thu Apr 8 20:18:58 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding icons for Measurements GUI

Revision 12694  Directory Listing
Modified Thu Apr 8 20:18:23 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding image resources for Measurements GUI

Revision 12693  Directory Listing
Modified Thu Apr 8 20:08:30 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: a compiler was complaining about getting to the end of a non void w/o returning

Revision 12692  Directory Listing
Modified Thu Apr 8 20:05:17 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: fixing compiler warning, needs equality rather than assignment

Revision 12691  Directory Listing
Modified Thu Apr 8 19:31:34 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: trying to find memory leaks, convert to smart pointers

Revision 12690  Directory Listing
Modified Thu Apr 8 19:01:58 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: trying to fix memory leaks

Revision 12689  Directory Listing
Modified Thu Apr 8 18:41:27 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: trying to find memory leak, changing to smart pointers

Revision 12688  Directory Listing
Modified Thu Apr 8 17:12:10 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: trying to find a memory leak, switch to smart pointers

Revision 12687  Directory Listing
Modified Thu Apr 8 17:11:12 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
COMP: Fix up VTK Qt variables.

Revision 12686  Directory Listing
Modified Thu Apr 8 16:06:07 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: test for leaks when closing an empty mrml scene

Revision 12685  Directory Listing
Modified Thu Apr 8 13:26:04 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
BUG: Fix configuring tk on Unix.

Revision 12684  Directory Listing
Modified Thu Apr 8 13:16:17 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
BUG: Fix building tk on Unix.

Revision 12683  Directory Listing
Modified Thu Apr 8 00:47:14 2010 UTC (7 years, 5 months ago) by hjohnson
Original Path: trunk
COMP:  Fixed external compilation dependancy on the GenerateCLP program.

Revision 12682  Directory Listing
Modified Wed Apr 7 21:38:41 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
BUG:PPD resampling problem corrected and singular matrix exception throw added

Revision 12680  Directory Listing
Modified Wed Apr 7 17:37:48 2010 UTC (7 years, 5 months ago) by vrnova
Original Path: trunk
BUGFIX: fixed bug in multi-volume rendering compositing algorithm

Revision 12679  Directory Listing
Modified Wed Apr 7 16:52:20 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: speed up color picker dialog showing up on the first time by not adding all the color nodes, just labels

Revision 12678  Directory Listing
Modified Tue Apr 6 22:14:46 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: backwards compatibility, check for a mrml scene version that's from before changed the glyph type numbering and adjust

Revision 12677  Directory Listing
Modified Tue Apr 6 22:12:50 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: adding testing

Revision 12669  Directory Listing
Modified Tue Apr 6 21:20:07 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: bring the angle gui and node into line with the ruler (bug 775): display the angle, moved elements around, added support for coloured handles (use the spheres to support this better). BUG: fixed the click to place issue with a little hack, still need to trigger updating when load a scene with new colours on end points. 

Revision 12668  Directory Listing
Modified Tue Apr 6 21:17:02 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: fix some comments.

Revision 12667  Directory Listing
Modified Tue Apr 6 21:16:28 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: fix some comments. BUG: make sure to check for null pointer before printing out current distance annot

Revision 12666  Directory Listing
Modified Tue Apr 6 18:50:53 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: adding missing print out of last loaded version

Revision 12665  Directory Listing
Modified Tue Apr 6 18:07:56 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: adding missing print out of version

Revision 12664  Directory Listing
Modified Tue Apr 6 17:29:26 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixed linked behavior on side-by-side compare view

Revision 12663  Directory Listing
Modified Tue Apr 6 13:36:56 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG_FIXED 707
Added warning dialog for unsupported non-linear transforms

Revision 12662  Directory Listing
Modified Tue Apr 6 13:28:43 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix for bug 770 - make model intersections visible when built in slicer in addition to when they are loaded

Revision 12660  Directory Listing
Modified Mon Apr 5 23:04:47 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: as per bug 792, try to make the new brain lut the default by putting the Labels node in a category and taking this file out of one

Revision 12659  Directory Listing
Modified Mon Apr 5 22:31:08 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: memory leak fix

Revision 12658  Directory Listing
Modified Mon Apr 5 22:30:38 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: separate out the user color file path loaded ones, so can set them up to save with scene

Revision 12657  Directory Listing
Modified Mon Apr 5 20:45:57 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix for  0000756.  Annotations out of sync when mouse event is triggered when pointer has just moved out of window.  Fix by not updating annotations if mouse is outside

Revision 12656  Directory Listing
Modified Mon Apr 5 20:26:34 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: remove unused variable

Revision 12655  Directory Listing
Modified Mon Apr 5 19:52:35 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt: revert qMRMLNodeComboBox to qMRMLNodeSelector for stability reasons.

Revision 12654  Directory Listing
Modified Mon Apr 5 19:38:42 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding image data for new side-by-side compare view layout

Revision 12653  Directory Listing
Modified Mon Apr 5 19:37:03 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: added start of side by side compare view. linked control not yet working.

Revision 12652  Directory Listing
Modified Mon Apr 5 19:24:35 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
BUG:--compare does not compare DTIs properly

Revision 12646  Directory Listing
Modified Mon Apr 5 18:15:05 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: request a render after turning off widget

Revision 12645  Directory Listing
Modified Mon Apr 5 17:57:01 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: use the newly exposed get text actor to update the camera

Revision 12644  Directory Listing
Modified Mon Apr 5 17:56:13 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: need to set SaveDialogOn so that can pick unexisting files

Revision 12643  Directory Listing
Modified Mon Apr 5 16:41:37 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: remove the load panel and button, it's controlled through the File add and save data widgets

Revision 12642  Directory Listing
Modified Mon Apr 5 15:04:09 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
ENH: Minor modifications in xml

Revision 12641  Directory Listing
Modified Mon Apr 5 14:01:25 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
ENH:help improved

Revision 12640  Directory Listing
Modified Sun Apr 4 15:18:28 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: finally hook up setting the angle annotation text colour now that VTK supports it

Revision 12639  Directory Listing
Modified Sun Apr 4 14:02:13 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: fix comment

Revision 12638  Directory Listing
Modified Sun Apr 4 12:40:22 2010 UTC (7 years, 5 months ago) by lassoan
Original Path: trunk
COMP: Fixed ProstateNav linux compilation warnings

Revision 12637  Directory Listing
Modified Sat Apr 3 19:29:47 2010 UTC (7 years, 5 months ago) by lassoan
Original Path: trunk
COMP: Removed ProstateNav working copy revision display from build messages

Revision 12636  Directory Listing
Modified Sat Apr 3 18:54:21 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG_FIXED: fixed window/level threshold setting to 0 when loading scenes

Revision 12635  Directory Listing
Modified Sat Apr 3 18:31:08 2010 UTC (7 years, 5 months ago) by lassoan
Original Path: trunk
COMP: Fixed ProstateNav compilation warnings

Revision 12634  Directory Listing
Modified Sat Apr 3 12:40:43 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix ruler measurment annotation

Revision 12633  Directory Listing
Modified Sat Apr 3 01:17:45 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix 'drift' issue when manipulating slice view of measurements

Revision 12632  Directory Listing
Modified Sat Apr 3 00:57:31 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: make ruler show up only on matching slice (interaction still incorrect)

Revision 12631  Directory Listing
Modified Sat Apr 3 00:10:03 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: getting rid of memory leaks, making a start on supporting multiple views, add export, actually remove widgets when get node removed

Revision 12630  Directory Listing
Modified Fri Apr 2 23:09:21 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: fix the logic on the new ruler naming, so can just hit return if you don't care

Revision 12629  Directory Listing
Modified Fri Apr 2 22:27:20 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: don't just rely on the error log, pop up a message as to why the ruler making failed

Revision 12628  Directory Listing
Modified Fri Apr 2 22:26:41 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: return 1 on success 0 on failure so app gui can give better feedback

Revision 12627  Directory Listing
Modified Fri Apr 2 20:41:06 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: BatchMake: update doc and acknowledgment

Revision 12626  Directory Listing
Modified Fri Apr 2 20:29:28 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: use the fiducials to place a new ruler in 2d

Revision 12625  Directory Listing
Modified Fri Apr 2 20:29:02 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: since 2d interactions are a bit iffy, use the last two fids on the active list to make a new ruler

Revision 12624  Directory Listing
Modified Fri Apr 2 20:25:42 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: remove the observers from the thing we're checking to see if it has observers

Revision 12623  Directory Listing
Modified Fri Apr 2 19:47:25 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: gracefully handle boundary case of non-convergence of equal step calculation

Revision 12622  Directory Listing
Modified Fri Apr 2 19:35:42 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: make path use all fiducials and ENH: add camera angle control

Revision 12621  Directory Listing
Modified Fri Apr 2 19:18:09 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG_FIXED: 791
Threshold switches to Msnual from Off when a slider moves.

Revision 12620  Directory Listing
Modified Fri Apr 2 19:11:16 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: moved the distance calc into the node

Revision 12619  Directory Listing
Modified Fri Apr 2 19:09:23 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: save the distance and current distance annotation in the node so that the 2d rulers can get at the info

Revision 12618  Directory Listing
Modified Fri Apr 2 18:40:28 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG_FIXED: 624:
made all data loaders create nodes with unique names. Also renaming nodes in node selectors

Revision 12617  Directory Listing
Modified Fri Apr 2 16:36:05 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt: fix various issues with the double sliders. Add unit test for qCTKDoubleRangeSlider.

Revision 12616  Directory Listing
Modified Fri Apr 2 16:36:00 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt: add more test to qCTKRangeSlider + Fix bug of slider positions when tracking is off

Revision 12615  Directory Listing
Modified Fri Apr 2 16:35:56 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: Add test to qCTKRangeSlider.

Revision 12614  Directory Listing
Modified Fri Apr 2 12:58:20 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: make 0 label alpha value 0

Revision 12613  Directory Listing
Modified Fri Apr 2 12:33:34 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: enable endoscpy module

Revision 12612  Directory Listing
Modified Fri Apr 2 06:20:24 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
STYLE: Expand Infrastructure to include source code from IBM whenever flag in CMakeLists.txt file is set

Revision 12610  Directory Listing
Modified Thu Apr 1 22:22:13 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
STYLE: fix comment.

Revision 12609  Directory Listing
Modified Thu Apr 1 22:15:51 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
STYLE: clean up unused code, add comments.

Revision 12608  Directory Listing
Modified Thu Apr 1 22:12:53 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
ENH: cleanup building itcl.

Revision 12607  Directory Listing
Modified Thu Apr 1 22:12:36 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
ENH: cleanup building itcl.

Revision 12606  Directory Listing
Modified Thu Apr 1 22:11:28 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
COMP: massive improvments to building tcl/tk libraries, add a custom step for installing blt (to supress as it appears to always fail trying to create a shared blt library.

Revision 12605  Directory Listing
Modified Thu Apr 1 22:11:21 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
STYLE: remove unneeded error message

Revision 12604  Directory Listing
Modified Thu Apr 1 22:03:34 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix leak

Revision 12603  Directory Listing
Modified Thu Apr 1 22:02:44 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
COMP: fix warning

Revision 12602  Directory Listing
Modified Thu Apr 1 21:55:30 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: revert to collapsible frames to avoid crash on exit

Revision 12601  Directory Listing
Modified Thu Apr 1 21:29:03 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
ENH:Support inversion of transforms order in file or node (not h-field)

Revision 12600  Directory Listing
Modified Thu Apr 1 21:28:22 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
ENH:Support inversion of transforms order in file or node (not h-field)

Revision 12599  Directory Listing
Modified Thu Apr 1 21:23:58 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
STYLE: remove dead code

Revision 12598  Directory Listing
Modified Thu Apr 1 21:17:46 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
ENH: recovering License file.

Revision 12597  Directory Listing
Modified Thu Apr 1 21:17:26 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid FrameWithLabel as it was causing mystery crash on exit

Revision 12596  Directory Listing
Modified Thu Apr 1 21:14:36 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
COMP: fixing compiler warnings

Revision 12590  Directory Listing
Modified Thu Apr 1 20:37:55 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
COMP: fixing some compiler warnings

Revision 12589  Directory Listing
Modified Thu Apr 1 20:32:44 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
ENH: new version is copied from NAMICSandBox.

Revision 12588  Directory Listing
Modified Thu Apr 1 20:10:39 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: check for null scene

Revision 12587  Directory Listing
Modified Thu Apr 1 20:08:58 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
COMP: activate ProstateNav module

Revision 12586  Directory Listing
Modified Thu Apr 1 20:06:27 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: trying to fix crash on exit, memory leaks

Revision 12585  Directory Listing
Modified Thu Apr 1 20:00:59 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
ENH: roll back to ProstateNav module revision 12570.

Revision 12584  Directory Listing
Modified Thu Apr 1 19:45:07 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
ENH: delete ProstateNav temporally

Revision 12583  Directory Listing
Modified Thu Apr 1 15:54:42 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: take out mm in angle annotation defaults

Revision 12582  Directory Listing
Modified Thu Apr 1 15:42:15 2010 UTC (7 years, 5 months ago) by tokuda
Original Path: trunk
BUG: fixing bug 0000637 (OpenIGTLink crash if locator is not set) reported on Sep 1, 2009. 

Revision 12581  Directory Listing
Modified Thu Apr 1 15:02:16 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: removing compiler warnings

Revision 12580  Directory Listing
Modified Thu Apr 1 03:57:11 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
ENH: download blt's patch using cmake's file command executed from blt_download_tcl84_patch.cmake.

Revision 12579  Directory Listing
Modified Thu Apr 1 03:55:18 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
COMP: fix accidental overriding of tk_make_step.cmake.in.

Revision 12578  Directory Listing
Modified Thu Apr 1 03:53:59 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
COMP: massive improvements corresponding to a breakthrough discovery that you must configure build and install tcl/tk from with the unix dir of the source tree and not the root or certain files (tkConfig.sh && tclConfig.sh) may not be correctly generated.

Revision 12577  Directory Listing
Modified Thu Apr 1 01:22:21 2010 UTC (7 years, 5 months ago) by hliu
Original Path: trunk
ENH: added a new version of ProstateNav module.

Revision 12576  Directory Listing
Modified Thu Apr 1 01:13:24 2010 UTC (7 years, 5 months ago) by hliu
Original Path: trunk
ENH: removed ProstateNav module.

Revision 12575  Directory Listing
Modified Wed Mar 31 23:34:22 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
ENH: new endoscopy module (very basic)

Revision 12574  Directory Listing
Modified Wed Mar 31 23:15:06 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: new colour files, generated from wiki page

Revision 12573  Directory Listing
Modified Wed Mar 31 23:00:57 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: add the format options menu

Revision 12572  Directory Listing
Modified Wed Mar 31 22:50:33 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: add a drop down menu with some default annotation options

Revision 12571  Directory Listing
Modified Wed Mar 31 22:20:15 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
ENH: new interface for helping manage volumes that are components of a larger labelmap

Revision 12570  Directory Listing
Modified Wed Mar 31 21:56:21 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: tried to get the affine widget to work in 3d, but can't update it's internal transform when get a transform modified event, so disable it

Revision 12569  Directory Listing
Modified Wed Mar 31 21:37:35 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
ENH: add convenience proc

Revision 12568  Directory Listing
Modified Wed Mar 31 21:27:14 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix clone operation to handle scalar vs label map display nodes

Revision 12567  Directory Listing
Modified Wed Mar 31 19:47:06 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
ENH: Rolled back functionality to Slicer3.4 (r9240) and only included bug fixes

Revision 12566  Directory Listing
Modified Wed Mar 31 19:45:18 2010 UTC (7 years, 5 months ago) by pohl
Original Path: trunk
ENH: Rolled back functionality to Slicer3.4 (r9240) and only included bug fixes

Revision 12565  Directory Listing
Modified Wed Mar 31 19:34:13 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: Volume Rendering: activate vtk GPU rendering by default since Slicer uses VTK 5 6

Revision 12564  Directory Listing
Modified Wed Mar 31 18:27:25 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: when moving the fids in 2d, need to take into account any transforms

Revision 12563  Directory Listing
Modified Wed Mar 31 17:37:30 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: apply inverted parent transform to picked points in both 2d and 3d

Revision 12562  Directory Listing
Modified Wed Mar 31 14:56:05 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
ENH: always use compression for output images

Revision 12561  Directory Listing
Modified Wed Mar 31 02:38:28 2010 UTC (7 years, 5 months ago) by hjohnson
Original Path: trunk
COMP: Fixed setting of DYLD_LIBRARY_PATH for Mac to alow building of VTK.

Revision 12560  Directory Listing
Modified Wed Mar 31 00:29:57 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
COMP: fix typo.

Revision 12559  Directory Listing
Modified Wed Mar 31 00:04:21 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
ENH: check in blt patch command.

Revision 12558  Directory Listing
Modified Wed Mar 31 00:00:42 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
COMP: only patch blt on mac.

Revision 12557  Directory Listing
Modified Tue Mar 30 22:50:12 2010 UTC (7 years, 5 months ago) by partyd
Original Path: trunk
ENH: many more fixes for tcl libraries on Mac. Switch super build to use VTK-5-6.

Revision 12556  Directory Listing
Modified Tue Mar 30 22:44:38 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: make pick work as expected when the fiducial list is inside of a transform node. TODO: implement in 2D

Revision 12555  Directory Listing
Modified Tue Mar 30 21:53:31 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: fixed typo

Revision 12554  Directory Listing
Modified Tue Mar 30 21:52:20 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: use the vtkSeedWidget for the fiducials, new for VTK 5.6. Fix glyph source 2d to start the index at 1

Revision 12553  Directory Listing
Modified Tue Mar 30 21:51:17 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: throw an event when swap fids, use smart pointers, check for position change before setting it

Revision 12552  Directory Listing
Modified Tue Mar 30 21:50:23 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: don't turn off modified when reading, new fids are faster

Revision 12551  Directory Listing
Modified Tue Mar 30 20:14:34 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: deal with active viewer widget being null and then not (solves problems with loading a mrml scene and getting crashes since was turning it on before interactor set, and when close scene the viewer widget is set to null

Revision 12550  Directory Listing
Modified Tue Mar 30 19:52:29 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: change default annotation label format

Revision 12549  Directory Listing
Modified Tue Mar 30 17:48:48 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
BUG: don't call update - ever!

Revision 12548  Directory Listing
Modified Tue Mar 30 17:36:09 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: 785 added volumeProperty to Load Data module

Revision 12547  Directory Listing
Modified Tue Mar 30 16:04:52 2010 UTC (7 years, 5 months ago) by hliu
Original Path: trunk
ENH: added module IntegratedNavigation.

Revision 12546  Directory Listing
Modified Tue Mar 30 15:36:52 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: colour both ends of the ruler, as it's now supported with vtk 5.6

Revision 12545  Directory Listing
Modified Tue Mar 30 15:36:00 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
ENH:Add a test for ResampleDTI

Revision 12544  Directory Listing
Modified Tue Mar 30 15:35:52 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
BUG: do not ever pass NULL to cout

Revision 12543  Directory Listing
Modified Tue Mar 30 13:08:23 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
COMP: fix to allow building on mac platforms with vtk 5.6

Revision 12542  Directory Listing
Modified Tue Mar 30 03:27:22 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
ENH:Remove useless templated type to save memory

Revision 12541  Directory Listing
Modified Tue Mar 30 03:24:04 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
STYLE: Compiles first a library with the source code and then compiles the executable from this library

Revision 12540  Directory Listing
Modified Mon Mar 29 23:01:24 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
BUG: fixing memory leaks

Revision 12539  Directory Listing
Modified Mon Mar 29 20:11:27 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
ENH: more cout

Revision 12538  Directory Listing
Modified Mon Mar 29 20:09:04 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: change cout calls to use vtk macros

Revision 12537  Directory Listing
Modified Mon Mar 29 20:05:47 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: start compiling the new seed widget class, used in the next gen fiducials

Revision 12536  Directory Listing
Modified Mon Mar 29 20:05:17 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: give warnings before return

Revision 12535  Directory Listing
Modified Mon Mar 29 20:04:09 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: avoid issuing duplicate events

Revision 12534  Directory Listing
Modified Mon Mar 29 19:57:40 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
ENH: new class to help monitor memory

Revision 12533  Directory Listing
Modified Mon Mar 29 19:54:31 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: use the new vtk5.6 methods

Revision 12532  Directory Listing
Modified Mon Mar 29 19:29:33 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: use the new VTK-5-6 branch. Remove Slicer3-lib/*-build and then run Scripts/getbuildtest.tcl

Revision 12531  Directory Listing
Modified Mon Mar 29 19:04:33 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix mouse mode behavior in pick and place modes to work with fiducials and editor

Revision 12530  Directory Listing
Modified Mon Mar 29 18:57:50 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
ENH: add printouts to the test to facilitate debugging failures on remote
sites

Revision 12529  Directory Listing
Modified Mon Mar 29 18:02:29 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
ENH: MRML node test

Revision 12528  Directory Listing
Modified Mon Mar 29 17:35:50 2010 UTC (7 years, 5 months ago) by hjohnson
Original Path: trunk
ENH: Changed the CMakeLists.txt files to have capitalization conforming to the new cmake recommendations.

Revision 12527  Directory Listing
Modified Mon Mar 29 17:34:11 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: make sure selected flag is correct

Revision 12526  Directory Listing
Modified Mon Mar 29 17:30:59 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
ENH: added basic testing for GUI classes

Revision 12525  Directory Listing
Modified Mon Mar 29 16:41:18 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
STYLE: remove cout
BUG: fixing memory leaks

Revision 12524  Directory Listing
Modified Mon Mar 29 16:32:24 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
BUG: with the default priority=0, the event does not reach the observer. I
don't know why.

Revision 12523  Directory Listing
Modified Mon Mar 29 16:20:02 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
BUG: renaming

Revision 12522  Directory Listing
Modified Mon Mar 29 16:18:20 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
BUG: renaming-related fixes

Revision 12521  Directory Listing
Modified Mon Mar 29 15:58:57 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
BUG: incorrect default values, matrix leak

Revision 12520  Directory Listing
Modified Mon Mar 29 15:51:57 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
ENH: interface changes, different approach to thresholds calculation from
user-defined segmentation

Revision 12519  Directory Listing
Modified Mon Mar 29 14:39:08 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: got rid of placeOperationLock, and hopefully fixed bad behavior this caused elsewhere (in editor). Conditioned the seed pick on leftButtonPress events further, to include a non-null grabID check.

Revision 12518  Directory Listing
Modified Mon Mar 29 13:24:47 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
ENH: fixing svn inconsistencies

Revision 12517  Directory Listing
Modified Mon Mar 29 13:22:52 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
STYLE: ExtractSubvolumeROI is now CropVolume

Revision 12516  Directory Listing
Modified Mon Mar 29 12:06:31 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
ENH: turn off deprecated ExtractSubvolume module

Revision 12515  Directory Listing
Modified Sun Mar 28 17:54:49 2010 UTC (7 years, 5 months ago) by casey.goodlett
Original Path: trunk
STYLE: Update documentation pointer for Transform From Fiducials.

Revision 12514  Directory Listing
Modified Sun Mar 28 16:13:08 2010 UTC (7 years, 5 months ago) by hjohnson
Original Path: trunk
ENH: Encapsulated the SlicerExecutionModel requirements so that it is easier to develop compliant applications without the burden of building all of Slicer.

Revision 12513  Directory Listing
Modified Sun Mar 28 16:12:39 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
ENH: make model effect now uses active color node to set default name.  also color box fixes in preparation for segmentation helper widget

Revision 12512  Directory Listing
Modified Sat Mar 27 20:43:05 2010 UTC (7 years, 5 months ago) by casey.goodlett
Original Path: trunk
STYLE: Update  acknowledgements and logo for TransformFromFiducials.

Revision 12511  Directory Listing
Modified Sat Mar 27 20:43:00 2010 UTC (7 years, 5 months ago) by casey.goodlett
Original Path: trunk
STYLE: Update acknowledgements and logo for RegisterImages.

Revision 12510  Directory Listing
Modified Sat Mar 27 20:42:57 2010 UTC (7 years, 5 months ago) by casey.goodlett
Original Path: trunk
STYLE: Update acknowledgements and logo for RegisterImagesMultiRes

Revision 12509  Directory Listing
Modified Sat Mar 27 20:41:12 2010 UTC (7 years, 5 months ago) by casey.goodlett
Original Path: trunk
ENH: Remove testing section from UI for RegisterImages.

Revision 12508  Directory Listing
Modified Sat Mar 27 20:09:38 2010 UTC (7 years, 5 months ago) by lorensen
Original Path: trunk
COMP: Improved documentation.

Revision 12507  Directory Listing
Modified Sat Mar 27 19:07:20 2010 UTC (7 years, 5 months ago) by ibanez
Original Path: trunk
COMP: Fioxing warnings about local variable m_Index shadowing member variable fo the same name.

Revision 12506  Directory Listing
Modified Sat Mar 27 18:53:38 2010 UTC (7 years, 5 months ago) by lorensen
Original Path: trunk
COMP: Need to EXPORT symbols for Windows.

Revision 12505  Directory Listing
Modified Sat Mar 27 18:52:54 2010 UTC (7 years, 5 months ago) by lorensen
Original Path: trunk
COMP: getline is in std:: namespace.

Revision 12504  Directory Listing
Modified Sat Mar 27 18:00:38 2010 UTC (7 years, 5 months ago) by hjohnson
Original Path: trunk
COMP:  Attempting to fix compilation error due to function prototypes not being declared external.

Revision 12498  Directory Listing
Modified Fri Mar 26 21:42:59 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: workaround for blocking the processing of pick events while user is in persistent place mode

Revision 12497  Directory Listing
Modified Fri Mar 26 21:42:22 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: workaround for blocking the processing of pick events while user is in persistent place mode

Revision 12496  Directory Listing
Modified Fri Mar 26 21:17:28 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED 743

Update display widgets when volume switches from scalar to label map and back.

Revision 12495  Directory Listing
Modified Fri Mar 26 20:30:23 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
STYLE:Help and aknowledgement improved

Revision 12494  Directory Listing
Modified Fri Mar 26 19:55:46 2010 UTC (7 years, 5 months ago) by taox
Original Path: trunk
ENH: for images without vendor info, we treate them as a regular volume.

Revision 12493  Directory Listing
Modified Fri Mar 26 19:28:13 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH:SlicerQt: use std::numeric_limits instead of itk::NumericTraits, it removes the itk dependency.

Revision 12492  Directory Listing
Modified Fri Mar 26 19:28:10 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: Add the signals nodeAdded and nodeAboutToBeRemoved to the QObject qMRMLNodeComboBox. It is notably used in qSlicerCamerasModuleWidget.

Revision 12491  Directory Listing
Modified Fri Mar 26 19:28:06 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt: the state of the buttons Cancel and Apply of the CLI modules doesn't depend on the number of items in the node selector but if an item is currently selected.

Revision 12490  Directory Listing
Modified Fri Mar 26 19:28:03 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
BUG: qSlicerCLIModuleWidget was initializing qCTKDoubleSlider with int:min() and int::max() that fired an assert. qCTKDoubleSlider now poorly handle values outside of the integer bounds.

Revision 12489  Directory Listing
Modified Fri Mar 26 18:11:23 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
STYLE:ResampleVolume2 logo changed from ITK to NAMIC

Revision 12488  Directory Listing
Modified Fri Mar 26 18:09:48 2010 UTC (7 years, 5 months ago) by francois_budin
Original Path: trunk
STYLE:Help and aknowledgement improved

Revision 12485  Directory Listing
Modified Fri Mar 26 16:29:51 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
STYLE: update tool tips and labels

Revision 12484  Directory Listing
Modified Fri Mar 26 14:53:09 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG_FIXED: 784
VolumeRendering presets stay selected

Revision 12483  Directory Listing
Modified Fri Mar 26 14:24:58 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: provide more display properties control over the seeds, first pass at swapping seeds

Revision 12482  Directory Listing
Modified Fri Mar 26 13:54:22 2010 UTC (7 years, 5 months ago) by hjohnson
Original Path: trunk
COMP:  This functionality is now included in the ModuleDescriptionUtilities.  It was causing a duplicate symbol error during linking.

Revision 12481  Directory Listing
Modified Fri Mar 26 03:17:44 2010 UTC (7 years, 5 months ago) by vmagnotta
Original Path: trunk
COMP: Fixed a compliation warning in
itkMimxImageToVtkUnstructuredGridFilter. The tests 
were also renamed to begin with Mimx for easy 
review.

Revision 12480  Directory Listing
Modified Fri Mar 26 02:32:05 2010 UTC (7 years, 5 months ago) by hjohnson
Original Path: trunk
COMP:  Removed compiler warning due to double inclusion of the same tool

Revision 12476  Directory Listing
Modified Thu Mar 25 22:11:29 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: Use QSharedPointer instead of std::auto_ptr.

Revision 12475  Directory Listing
Modified Thu Mar 25 22:11:25 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: Remove q[CTK-VTK-MRML]Widgets/Plugins classes from the doxygen documentation.

Revision 12473  Directory Listing
Modified Thu Mar 25 20:45:01 2010 UTC (7 years, 5 months ago) by taox
Original Path: trunk
BUG: Somehow the argument type was changes.

Revision 12472  Directory Listing
Modified Thu Mar 25 20:44:08 2010 UTC (7 years, 5 months ago) by taox
Original Path: trunk
BUG: this function is blank by intention. There should not be a warning message.

Revision 12471  Directory Listing
Modified Thu Mar 25 19:32:49 2010 UTC (7 years, 5 months ago) by awiles
Original Path: trunk
ENH:Cleaned up code for 3.6 release.

Revision 12470  Directory Listing
Modified Thu Mar 25 17:41:18 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
BUG: qMRMLVariantArrayItemHelper was increasing the reference count of the vtkMRMLScene (preventing it to be deleted). A system to not increase the reference count has been added.

Revision 12469  Directory Listing
Modified Thu Mar 25 17:31:03 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH:added new mouse-mode behavior to ruler widget in Slice Viewers

Revision 12468  Directory Listing
Modified Thu Mar 25 15:58:58 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
BUG: Add qCTKDoubleSliderTest1, fix a bug when changing the singlestep was setting the wrong value to the slider (because the range was set too late).

Revision 12467  Directory Listing
Modified Thu Mar 25 15:58:54 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: Add qCTKRangeWidget + redesigned the range widgets: qCTKRangeSlider, qCTKDoubleRangeSlider

Revision 12466  Directory Listing
Modified Thu Mar 25 15:46:52 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
COMP: remove compiler warning about signed/unsigned comparison

Revision 12465  Directory Listing
Modified Thu Mar 25 14:02:52 2010 UTC (7 years, 5 months ago) by vrnova
Original Path: trunk
ENH: cap maximum sampling rate

Revision 12454  Directory Listing
Modified Wed Mar 24 22:11:35 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: colour the 2d ruler the same as the 3d one. TODO: when switch to 5.6 put back in the setting of point2

Revision 12452  Directory Listing
Modified Wed Mar 24 21:41:08 2010 UTC (7 years, 5 months ago) by fedorov
Original Path: trunk
ENH: use compression for output volumes

Revision 12450  Directory Listing
Modified Wed Mar 24 20:28:47 2010 UTC (7 years, 5 months ago) by lassoan
Original Path: trunk
BUG: Added missing OpenIGTLink directory to Slicer3SetupPaths.bat (the problem was that modules that relied on OpenIGTLink were not displayed in the module list when Slicer was started by running Slicer3SetupPaths.bat & Slicer3-real.exe)

Revision 12449  Directory Listing
Modified Wed Mar 24 18:53:54 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
BUG: set the executable for registered file extensions when reading them in from the cache

Revision 12448  Directory Listing
Modified Wed Mar 24 16:49:28 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
ENH: change default annotation format (only 1 decimal place)

Revision 12447  Directory Listing
Modified Wed Mar 24 16:48:40 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
STYLE: remove dead code

Revision 12446  Directory Listing
Modified Wed Mar 24 16:48:05 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
ENH: avoid duplicate renders by moving render request to end of event queue

Revision 12445  Directory Listing
Modified Wed Mar 24 00:03:13 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: qMRMLSceneModel: make sure the parents don't have children in the column != 0. The qCTKModelTester doesn't like when a valid data is a null QVariant, return an empty QString instead.

Revision 12444  Directory Listing
Modified Wed Mar 24 00:03:08 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: qMRMLSceneModel had hierarchies in column != 0. Support the case when a node is added to the scene without NodeAboutToBeAdded. When the mrmlscene is not set, disable the combobox and don't add the ExtraItems.

Revision 12443  Directory Listing
Modified Wed Mar 24 00:03:03 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: Don't show the "Add Node" option in the Volumes module

Revision 12442  Directory Listing
Modified Wed Mar 24 00:02:57 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: Add more tests in qCTKModelTester

Revision 12441  Directory Listing
Modified Wed Mar 24 00:02:51 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt: weird behavior in the range slider.

Revision 12440  Directory Listing
Modified Wed Mar 24 00:02:44 2010 UTC (7 years, 5 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: Add a basic implementation of qCTKDoubleRangeSlider

Revision 12439  Directory Listing
Modified Tue Mar 23 23:24:29 2010 UTC (7 years, 5 months ago) by naucoin
Original Path: trunk
ENH: added a distance label, adjusted default location, end colour, moved things around in the gui

Revision 12437  Directory Listing
Modified Tue Mar 23 22:50:09 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: fix for 782 and also some style cleanup and remove a limitation of 1 fiducial per second (probably not needed any more since event handling improved in 2D fiducials)

Revision 12436  Directory Listing
Modified Tue Mar 23 22:33:37 2010 UTC (7 years, 5 months ago) by pieper
Original Path: trunk
BUG: 778 clean up experimental build system modifications

Revision 12434  Directory Listing
Modified Tue Mar 23 14:21:36 2010 UTC (7 years, 5 months ago) by alexy
Original Path: trunk
BUG-FIXED: fixed crash in qMRMLSceneModel on load volume

Revision 12433  Directory Listing
Modified Tue Mar 23 13:44:29 2010 UTC (7 years, 5 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated 3D widgets to conform to new mouse-mode behavior. 2D widgets in Slice Viewer not yet done... work in progress.

Revision 12432  Directory Listing
Modified Tue Mar 23 01:57:05 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: check in the darwin blt patch to fascilitate using it much easier.

Revision 12431  Directory Listing
Modified Tue Mar 23 01:40:00 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: fixes for Mac to properly patch and build incrtcl.

Revision 12430  Directory Listing
Modified Tue Mar 23 01:32:09 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: fixes for Mac to properly patch and build incrtcl.

Revision 12429  Directory Listing
Modified Tue Mar 23 00:05:50 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing win/lev problem introduced by mouse-mode change.

Revision 12428  Directory Listing
Modified Mon Mar 22 20:58:36 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 12427  Directory Listing
Modified Mon Mar 22 20:03:19 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: fix leak that led to failed test

Revision 12426  Directory Listing
Modified Mon Mar 22 19:50:03 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 12425  Directory Listing
Modified Mon Mar 22 18:17:45 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: reduce the maximum color id to something a bit more reasonable

Revision 12424  Directory Listing
Modified Mon Mar 22 17:38:10 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: use the new error checking capabilities of the mrml nodes

Revision 12423  Directory Listing
Modified Mon Mar 22 17:38:06 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: added a lot of error checking and breaking loops when find errors. When reading in a color file, check that the max id is < 1 million to try and avoid parsing text files and getting huge max id values

Revision 12422  Directory Listing
Modified Mon Mar 22 17:10:48 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt: Wrong signature for the slot updateRangeBounds.

Revision 12421  Directory Listing
Modified Mon Mar 22 17:05:42 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk
BUG: disable all controls in the IO frame while adjusting segmentation result
(bug 762)

Revision 12420  Directory Listing
Modified Mon Mar 22 16:58:32 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
ENH: Change qMRMLNodeSelector into qMRMLNodeComboBox. qMRMLNodeSelector is obsolete.

Revision 12419  Directory Listing
Modified Mon Mar 22 15:05:52 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
ENH: add warning if no files are found

Revision 12418  Directory Listing
Modified Mon Mar 22 14:55:22 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: fix broken accounting for reused seed widgets

Revision 12417  Directory Listing
Modified Mon Mar 22 13:05:06 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
COMP: Remove warnings: unused variable

Revision 12416  Directory Listing
Modified Sun Mar 21 23:21:05 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated mousemode behavior

Revision 12415  Directory Listing
Modified Sun Mar 21 23:18:40 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updated mousemode behavior

Revision 12414  Directory Listing
Modified Sun Mar 21 22:46:05 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding reworked mouse mode icons and options menu

Revision 12413  Directory Listing
Modified Sun Mar 21 22:44:09 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: image data resource for mouse mode rework

Revision 12412  Directory Listing
Modified Sun Mar 21 22:42:22 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding icon imagedata for mouse mode work in progress

Revision 12411  Directory Listing
Modified Sun Mar 21 22:40:40 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: fixed mouse mode image data to be clearer

Revision 12410  Directory Listing
Modified Sun Mar 21 22:38:25 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: adding options to mouse modes

Revision 12409  Directory Listing
Modified Sun Mar 21 19:54:45 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
ENH: customized the Planning step.

Revision 12408  Directory Listing
Modified Sun Mar 21 18:35:33 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 12407  Directory Listing
Modified Sun Mar 21 18:34:30 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 12406  Directory Listing
Modified Fri Mar 19 21:34:53 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: fix example to correctly pass NULL instead of 0

Revision 12405  Directory Listing
Modified Fri Mar 19 20:54:37 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
ENH: new test/example/debugging aid for the node selector widget

Revision 12404  Directory Listing
Modified Fri Mar 19 19:51:11 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
BUG:BSpline transform was not setting the non-rigid transform counter

Revision 12403  Directory Listing
Modified Fri Mar 19 19:26:42 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: patch for bug 559 (tell the Volumes GUI to update from MRML since it doesn't have its own observers)

Revision 12402  Directory Listing
Modified Fri Mar 19 19:12:22 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
BUG:BSpline transform was not setting the non-rigid transform counter

Revision 12401  Directory Listing
Modified Fri Mar 19 18:58:19 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
ENH: where possible, reuse existing seed widgets to avoid memory fragmentation and other overhead of creating and deleting objects

Revision 12400  Directory Listing
Modified Fri Mar 19 18:57:23 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: don't allow seed to be dragged with it's not visible

Revision 12399  Directory Listing
Modified Fri Mar 19 18:48:21 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fix for the welcome module gui panel size.

Revision 12398  Directory Listing
Modified Fri Mar 19 18:15:15 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: don't update window level is mouse is in 'place' mode

Revision 12397  Directory Listing
Modified Fri Mar 19 18:14:29 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: apply patch provided by Andras (bug 766)

Revision 12396  Directory Listing
Modified Fri Mar 19 18:13:18 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
ENH: speed up fiducial interaction by turning off text display while dragging

Revision 12395  Directory Listing
Modified Fri Mar 19 18:04:01 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk
COMP: Fixed duplicate reference to CollectFiducials module

Revision 12394  Directory Listing
Modified Fri Mar 19 17:53:42 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: fix issue reported in bug 766

Revision 12393  Directory Listing
Modified Fri Mar 19 15:31:02 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk
ENH: changed default seeding space

Revision 12392  Directory Listing
Modified Fri Mar 19 14:52:23 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk
BUG_FIXED: fixed qMRMLVolumeThreshold widget

Revision 12391  Directory Listing
Modified Fri Mar 19 14:40:11 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
BUG:Deformation field could not be set in slicer3 GUI

Revision 12390  Directory Listing
Modified Fri Mar 19 14:39:09 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
STYLE:Deformation field parameters presentation improvements

Revision 12389  Directory Listing
Modified Fri Mar 19 14:24:39 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: for 727 - auto detect single-file case for optimized loading

Revision 12388  Directory Listing
Modified Fri Mar 19 14:22:29 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
BUG:Deformation field could not be set in slicer3 GUI

Revision 12387  Directory Listing
Modified Fri Mar 19 13:47:02 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: for 727 - prefix series description with series number

Revision 12386  Directory Listing
Modified Fri Mar 19 13:33:49 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: set grab ID when placing fiducials to avoid interaction with window/level

Revision 12385  Directory Listing
Modified Fri Mar 19 12:36:49 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: per bug 727, make warning about missing geometry tag show up in italics rather than as a warning dialog

Revision 12384  Directory Listing
Modified Fri Mar 19 12:07:32 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: fix for issue 559 - make window level adjustment sensitive to the scalar range of the image data (hard coded to 1/500th of the scalar range per screen pixel which seems to work well

Revision 12383  Directory Listing
Modified Thu Mar 18 23:54:59 2010 UTC (7 years, 6 months ago) by sylvain
Original Path: trunk
ENH: add NAMIC logo in the MRIBiasFieldCorrection module

Revision 12382  Directory Listing
Modified Thu Mar 18 22:18:46 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
ENH:Supports float transform and code cleaned

Revision 12381  Directory Listing
Modified Thu Mar 18 20:49:25 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
ENH: added module LiverAblation.

Revision 12380  Directory Listing
Modified Thu Mar 18 17:40:38 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
STYLE:Split SetTransform function that was too long

Revision 12379  Directory Listing
Modified Thu Mar 18 16:45:55 2010 UTC (7 years, 6 months ago) by awiles
Original Path: trunk
ENH: Adding new module

Revision 12378  Directory Listing
Modified Thu Mar 18 16:41:33 2010 UTC (7 years, 6 months ago) by awiles
Original Path: trunk
ENH: Adding a new module.

Revision 12377  Directory Listing
Modified Thu Mar 18 16:36:16 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: when get a fiducial modified event, update the correct row

Revision 12376  Directory Listing
Modified Thu Mar 18 15:15:49 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
STYLE:Split CheckDWMRI function that was too long

Revision 12375  Directory Listing
Modified Thu Mar 18 14:45:44 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
STYLE:Split main function that was too long

Revision 12374  Directory Listing
Modified Thu Mar 18 00:56:41 2010 UTC (7 years, 6 months ago) by vmagnotta
Original Path: trunk
BUG: Fixed a number of leaks in vtk objects
that existed both in the filters and tests
that were written.


Revision 12373  Directory Listing
Modified Wed Mar 17 21:12:49 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
ENH:All the transforms are merged before being applied to the image

Revision 12372  Directory Listing
Modified Wed Mar 17 21:11:30 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
STYLE:comments modified

Revision 12371  Directory Listing
Modified Wed Mar 17 17:33:18 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
ENH: development for landmark registration.

Revision 12370  Directory Listing
Modified Wed Mar 17 13:30:40 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
BUG:InterpolationType redefinition removed

Revision 12369  Directory Listing
Modified Tue Mar 16 23:59:24 2010 UTC (7 years, 6 months ago) by vmagnotta
Original Path: trunk
COMP: Attempting to fix a problem when building the
testing framework under windows.

Revision 12368  Directory Listing
Modified Tue Mar 16 21:52:59 2010 UTC (7 years, 6 months ago) by vmagnotta
Original Path: trunk
BUG: Added missing files required for IA-FEMesh testing


Revision 12367  Directory Listing
Modified Tue Mar 16 21:06:00 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: clean up the updating of the gui, try to do the least possible, using the last added fid, and the id of the modified fid

Revision 12366  Directory Listing
Modified Tue Mar 16 20:49:11 2010 UTC (7 years, 6 months ago) by vmagnotta
Original Path: trunk
BUG: Fixed the name of the copyright file.

Revision 12365  Directory Listing
Modified Tue Mar 16 20:44:21 2010 UTC (7 years, 6 months ago) by vmagnotta
Original Path: trunk
ENH: Removed large image file from the repository.

Revision 12364  Directory Listing
Modified Tue Mar 16 20:43:30 2010 UTC (7 years, 6 months ago) by vmagnotta
Original Path: trunk
ENH: Added and enabled IA-FEMesh testing.

Revision 12363  Directory Listing
Modified Tue Mar 16 20:34:57 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
STYLE:modification of order of operation in CheckDWMRI and addition of comments

Revision 12362  Directory Listing
Modified Tue Mar 16 20:27:33 2010 UTC (7 years, 6 months ago) by vmagnotta
Original Path: trunk
ENH: Added testing for the IA-FEMesh module

Revision 12361  Directory Listing
Modified Tue Mar 16 19:17:29 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk
BUG_FIXED: fixed qt widgets layout

Revision 12360  Directory Listing
Modified Tue Mar 16 19:14:26 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
BUG:gradient direction is now saved properly

Revision 12359  Directory Listing
Modified Tue Mar 16 18:08:00 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updating icon imagedata for RotateToPixelSpace functionality

Revision 12358  Directory Listing
Modified Tue Mar 16 18:06:01 2010 UTC (7 years, 6 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: updating icon imagedata for RotateToPixelSpace functionality

Revision 12357  Directory Listing
Modified Tue Mar 16 17:51:39 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
ENH: completed pivot calibaration.

Revision 12356  Directory Listing
Modified Tue Mar 16 17:24:33 2010 UTC (7 years, 6 months ago) by hayes
Original Path: trunk
COMP: FileWatcher doesn't compile on older Linux kernels

Revision 12355  Directory Listing
Modified Tue Mar 16 09:46:42 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
COMP: stub out variable to fix compile warning

Revision 12354  Directory Listing
Modified Mon Mar 15 23:08:06 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: getting rid of a memory leak that led the fiducials GUI to hold onto a list via it's observers, remove observers when the node is deleted and when set the current node to null

Revision 12353  Directory Listing
Modified Mon Mar 15 22:00:34 2010 UTC (7 years, 6 months ago) by francois_budin
Original Path: trunk
ENH: Deformation field transfoms added/if multiple transforms, merges them before applying them/accepts float rigid and affine transforms

Revision 12352  Directory Listing
Modified Mon Mar 15 20:54:45 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
BUG: implemented pivot calibration.

Revision 12350  Directory Listing
Modified Mon Mar 15 18:36:41 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: only print a single warning dialog if a subseries has inconsistent or missing orientation information

Revision 12349  Directory Listing
Modified Mon Mar 15 17:55:57 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: include FileWatcher library in cpack'd package and add it to the runtime path list

Revision 12348  Directory Listing
Modified Mon Mar 15 15:43:38 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: don't always delete all the rows in the multicolumn list box, just add or delete as necessary.

Revision 12347  Directory Listing
Modified Mon Mar 15 12:59:56 2010 UTC (7 years, 6 months ago) by vrnova
Original Path: trunk
ENH: favor performance more than quality in single&multi-volume GPU ray casting to match with other mappers

Revision 12346  Directory Listing
Modified Mon Mar 15 12:49:46 2010 UTC (7 years, 6 months ago) by vrnova
Original Path: trunk
ENH: reduce number of points in color transfer funciton when using volume-follow mode

Revision 12345  Directory Listing
Modified Sun Mar 14 20:56:05 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
COMP: fix typo (extra paren in configure file)

Revision 12344  Directory Listing
Modified Sun Mar 14 20:24:39 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
ENH: more development for PatientToImageRegistration module.

Revision 12343  Directory Listing
Modified Sun Mar 14 18:38:40 2010 UTC (7 years, 6 months ago) by lorensen
Original Path: trunk
COMP: Need iostream for cout.

Revision 12341  Directory Listing
Modified Sat Mar 13 20:33:29 2010 UTC (7 years, 6 months ago) by lorensen
Original Path: trunk
COMP: Tracking down OSX issues.

Revision 12340  Directory Listing
Modified Sat Mar 13 16:37:54 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk
ENH: added qMRMLVolumeThreshold widget and added it scalarVolume display.

Revision 12339  Directory Listing
Modified Fri Mar 12 19:12:30 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
COMP: fix missing ')'

Revision 12338  Directory Listing
Modified Fri Mar 12 16:47:55 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk
ENH: fixed event handling in qMRMLWindowLevelWidget

Revision 12337  Directory Listing
Modified Fri Mar 12 15:33:44 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
COMP: fix missing ')'

Revision 12336  Directory Listing
Modified Fri Mar 12 14:55:34 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: itcl_configure_step needs to be configured with the path to tclsh.

Revision 12335  Directory Listing
Modified Fri Mar 12 14:54:53 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: more fixes for building itcl on Mac.

Revision 12334  Directory Listing
Modified Thu Mar 11 20:28:57 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: initial commit of itcl configure step script.

Revision 12333  Directory Listing
Modified Thu Mar 11 19:50:22 2010 UTC (7 years, 6 months ago) by lorensen
Original Path: trunk
ENH: Better description of exception.

Revision 12331  Directory Listing
Modified Wed Mar 10 20:27:49 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
ENH: more development.

Revision 12330  Directory Listing
Modified Wed Mar 10 17:49:00 2010 UTC (7 years, 6 months ago) by lorensen
Original Path: trunk
COMP: Warnings.

Revision 12329  Directory Listing
Modified Wed Mar 10 08:54:08 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
COMP: SlicerQt: fix int to enum conversion

Revision 12328  Directory Listing
Modified Wed Mar 10 08:34:13 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
COMP: SlicerQt: missing class predefinition.

Revision 12327  Directory Listing
Modified Wed Mar 10 00:38:43 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk
ENH: added qt volume display widgets

Revision 12326  Directory Listing
Modified Tue Mar 9 21:57:42 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
COMP: mac issues

Revision 12325  Directory Listing
Modified Tue Mar 9 21:56:05 2010 UTC (7 years, 6 months ago) by lorensen
Original Path: trunk
COMP: Mac issues.

Revision 12324  Directory Listing
Modified Tue Mar 9 21:45:56 2010 UTC (7 years, 6 months ago) by lorensen
Original Path: trunk
COMP: Mac issues.

Revision 12323  Directory Listing
Modified Tue Mar 9 18:41:08 2010 UTC (7 years, 6 months ago) by casey.goodlett
Original Path: trunk
COMP: Include cstdlib for EXIT_FAILURE and EXIT_SUCCESS definition in
FileWatcherTest.

Revision 12322  Directory Listing
Modified Tue Mar 9 16:52:15 2010 UTC (7 years, 6 months ago) by lorensen
Original Path: trunk
ENH:  Added FileWatcher, a portable library to watch directories for file addition, modification and deletion.

Revision 12321  Directory Listing
Modified Tue Mar 9 16:51:03 2010 UTC (7 years, 6 months ago) by lorensen
Original Path: trunk
ENH: A portable library to watch directories for file addition, modification and deletion. Currently it uses Win32 ReadDirectoryChangesW for monitoring changes in Windows, and inotify in linux. OSX is supported via kqueue and directory scans.
Written by James Wynn
Contact: james@jameswynn.com

The most recent version can be located at:
http://simplefilewatcher.googlecode.com

Formatting modifications, directory organization and CMake support by Bill Lorensen. The original API is intact.

Revision 12320  Directory Listing
Modified Tue Mar 9 08:44:44 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: add a qvtkreconnect that disconnect any existing connection that matches the event/qtobject/slot pattern

Revision 12319  Directory Listing
Modified Tue Mar 9 08:43:11 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
COMP: predef qMRMLProxyItemHelperPrivate

Revision 12318  Directory Listing
Modified Tue Mar 9 00:25:56 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
ENH: Use qMRMLNodeComboBox as the default node selector. (add the None option)

Revision 12317  Directory Listing
Modified Mon Mar 8 23:05:21 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: remove the anatomy label file, it's obsolete, users can use the --color option on the command line, otherwise from the GUI the colour node is grabbed from the input volume's display node

Revision 12316  Directory Listing
Modified Mon Mar 8 21:40:05 2010 UTC (7 years, 6 months ago) by aylward
Original Path: trunk
COMP: Isolated unused vars

Revision 12315  Directory Listing
Modified Mon Mar 8 13:38:01 2010 UTC (7 years, 6 months ago) by millerjv
Original Path: trunk
BUG: missing quote in XML

Revision 12314  Directory Listing
Modified Sun Mar 7 18:27:07 2010 UTC (7 years, 6 months ago) by alexy
Original Path: trunk
ENH: added qMRMLWindowLevelWidget, started filling in qVolumes module

Revision 12313  Directory Listing
Modified Fri Mar 5 20:55:55 2010 UTC (7 years, 6 months ago) by millerjv
Original Path: trunk
ENH: store collapsed state of the slice controllers in layout node

Revision 12312  Directory Listing
Modified Fri Mar 5 18:33:47 2010 UTC (7 years, 6 months ago) by millerjv
Original Path: trunk
BUG: crosshair menu now updates with a snapshot restore

Revision 12311  Directory Listing
Modified Fri Mar 5 18:33:39 2010 UTC (7 years, 6 months ago) by millerjv
Original Path: trunk
BUG: crosshair menu now updates with a snapshot restore

Revision 12310  Directory Listing
Modified Fri Mar 5 18:30:50 2010 UTC (7 years, 6 months ago) by millerjv
Original Path: trunk
ENH: moved crosshair creation to application logic

Revision 12309  Directory Listing
Modified Fri Mar 5 16:12:38 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: put back in the check for an empty extensions install path before using the default path

Revision 12308  Directory Listing
Modified Thu Mar 4 21:51:14 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
ENH: adding a test to load a color file, add it to the scene, save the scene, clear the scene, then load the scene back in. also loads a test volume and assigns it the new color node if the volumes logic exists

Revision 12307  Directory Listing
Modified Thu Mar 4 21:29:40 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
ENH: allow loading color table files as well

Revision 12306  Directory Listing
Modified Thu Mar 4 20:54:27 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
ENH: updated color file from Mike Halle

Revision 12305  Directory Listing
Modified Thu Mar 4 20:52:47 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
ENH: allow passing a node name to the loaded color file

Revision 12304  Directory Listing
Modified Thu Mar 4 20:51:55 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: switch to smart pointers means that tcl doesn't get the color node back.

Revision 12303  Directory Listing
Modified Thu Mar 4 19:59:57 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
ENH: use smart pointers to avoid memory leaks

Revision 12302  Directory Listing
Modified Thu Mar 4 19:59:02 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
ENH: take out the ReadFile method finally, it's handled via the color storage nodes. For backward compatibiity, if read in from xml a filename, create a storage node and use it to read

Revision 12301  Directory Listing
Modified Thu Mar 4 19:30:18 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: don't add color files that have been added via the Loader.tcl to the list of color files

Revision 12300  Directory Listing
Modified Thu Mar 4 19:18:02 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: also need to set the color node when it's currently null

Revision 12299  Directory Listing
Modified Thu Mar 4 19:08:24 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
ENH: use smart pointers to avoid memory leaks

Revision 12298  Directory Listing
Modified Thu Mar 4 00:24:41 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: add qMRMLWidgets plugin icons for Qt designer

Revision 12297  Directory Listing
Modified Wed Mar 3 21:29:03 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: getting rid of a memory leak

Revision 12296  Directory Listing
Modified Wed Mar 3 20:52:58 2010 UTC (7 years, 6 months ago) by aylward
Original Path: trunk
COMP: Commented-out the CountSamples test since it has a VERY long runtime.  Casey is on it...

Revision 12295  Directory Listing
Modified Wed Mar 3 19:54:48 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
ENH: updated color file (same as last update that was just undone, confusion over a version of Slicer that didn't have this file) 

Revision 12294  Directory Listing
Modified Wed Mar 3 19:46:46 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: restorign the 2009 color file

Revision 12293  Directory Listing
Modified Wed Mar 3 18:26:20 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
COMP: SlicerQt: rename qCTKRangeSlider::rangeChanged into qCTKRangeSlider::rangeValuesChanged() as QSlider::rangeChanged() exists.

Revision 12292  Directory Listing
Modified Wed Mar 3 18:19:58 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
ENH: updated colour table from Dominik Meier

Revision 12291  Directory Listing
Modified Wed Mar 3 18:17:58 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: when load a color file make sure that it gets saved with the scene

Revision 12290  Directory Listing
Modified Wed Mar 3 17:22:51 2010 UTC (7 years, 6 months ago) by hliu
Original Path: trunk
BUG: fixed bug with picking RAS on Green slice window.

Revision 12289  Directory Listing
Modified Wed Mar 3 16:45:59 2010 UTC (7 years, 6 months ago) by fedorov
Original Path: trunk
BUG: fixing the volume rendering in the segmentation and results step

Revision 12288  Directory Listing
Modified Wed Mar 3 14:36:43 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: qCTKAddRemoveComboBox is not a widget that can be used directly in the Designer, it is a base class. Don't make it as a plugin.

Revision 12287  Directory Listing
Modified Wed Mar 3 14:36:39 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: remove qCTKNumericInput as it does the same than QSpinBox or QDoubleSpinBox

Revision 12286  Directory Listing
Modified Wed Mar 3 14:36:32 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt: add icons to the qCTKWidgets plugins in Qt Designer

Revision 12285  Directory Listing
Modified Tue Mar 2 23:58:20 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
ENH: Add qCTKRangeSlider: a QSlider with 2 handles that can define a range.

Revision 12284  Directory Listing
Modified Tue Mar 2 23:09:13 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
ENH: Add qMRMLNodeComboBox (to replace qMRMLNodeSelector), it is based on qMRMLSceneModel and qMRMLSortFilterProxyModel

Revision 12283  Directory Listing
Modified Tue Mar 2 20:44:47 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Volumes QTModule is now returning the corresponding vtkSlicerLogic when createLogic is called. Also reorganized the headers includes.

Revision 12282  Directory Listing
Modified Tue Mar 2 20:44:43 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - Re-Organize header includes in Tractography QTModule

Revision 12281  Directory Listing
Modified Tue Mar 2 20:44:39 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
STYLE: In ModuleDescriptionParser/{ModuleParameter|ModuleDescription} and MRMLCLI/vtkMRMLCommandLineModuleNode CXX files, to improve readability added separator between function.

Revision 12280  Directory Listing
Modified Tue Mar 2 19:47:24 2010 UTC (7 years, 6 months ago) by casey.goodlett
Original Path: trunk
ENH: Enable box ROI in RegisterImagesMultiRes.

Revision 12279  Directory Listing
Modified Tue Mar 2 19:47:17 2010 UTC (7 years, 6 months ago) by casey.goodlett
Original Path: trunk
ENH: Add support for creating a box spatial object from two points to be used for masking registration.

Revision 12278  Directory Listing
Modified Tue Mar 2 19:47:12 2010 UTC (7 years, 6 months ago) by casey.goodlett
Original Path: trunk
ENH: Add support for creating a fixed image region of interest from a slicer ROI input.

This adds a helper function in ConvertSlicerROIToRegion.h that creates an itk::ImageRegion from two points and an image base.

A test class is provided.

Revision 12277  Directory Listing
Modified Tue Mar 2 19:44:29 2010 UTC (7 years, 6 months ago) by casey.goodlett
Original Path: trunk
STYLE: Add header to source file in RegisterImagesMultiRes

Revision 12276  Directory Listing
Modified Tue Mar 2 19:42:28 2010 UTC (7 years, 6 months ago) by casey.goodlett
Original Path: trunk
ENH: Add support for vtkMRMLROINode to command line module logic and gui.

This enables command line modules to accept ROI nodes in addition to ROI lists.

Revision 12275  Directory Listing
Modified Tue Mar 2 18:46:22 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: enclose the zip file in quotes to deal with spaces in the path

Revision 12274  Directory Listing
Modified Tue Mar 2 16:25:43 2010 UTC (7 years, 6 months ago) by casey.goodlett
Original Path: trunk
BUG: Fix merge models when path to input contains a "."

Revision 12273  Directory Listing
Modified Tue Mar 2 14:38:38 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: attempt to correct checkout error on blight/district9.

Revision 12272  Directory Listing
Modified Tue Mar 2 14:12:34 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: add support to supper build to control Debug Leaks for both VTK and Slicer.

Revision 12271  Directory Listing
Modified Mon Mar 1 23:59:16 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
BUG: VolumeRendering: temporally disable Minimum Intensity Projection.

Revision 12270  Directory Listing
Modified Mon Mar 1 23:51:09 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
BUG: VolumeRendering: remove memory leaks.

Revision 12269  Directory Listing
Modified Mon Mar 1 22:25:55 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
BUG: VolumeRendering: clipping planes must be in world coordinates. VolumeRendering, the vtkGPUVolumeRayCastMapper takes clipping planes in world coordinates, not local to the volume.

Revision 12268  Directory Listing
Modified Mon Mar 1 22:25:51 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
BUG: Correctly remove observers at destruction of vtkVolumeRenderingGUI

Revision 12267  Directory Listing
Modified Mon Mar 1 21:22:44 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: some fixes to get building with VTK CVS HEAD.

Revision 12266  Directory Listing
Modified Mon Mar 1 21:06:22 2010 UTC (7 years, 6 months ago) by aylward
Original Path: trunk
BUG: compile arguments aren't additive.  So, created a compount argument that includes the moduleEntryPoint as well as the Support-2d-images option.

Revision 12265  Directory Listing
Modified Mon Mar 1 20:59:20 2010 UTC (7 years, 6 months ago) by aylward
Original Path: trunk
ENH: Added support for 2D images when SUPPORT_2D_IMAGES cmake var is set.

Revision 12264  Directory Listing
Modified Mon Mar 1 19:55:20 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: add superbuild option to build slicer with VTK CVS HEAD.

Revision 12263  Directory Listing
Modified Mon Mar 1 16:42:12 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
BUG: Bug introduced when python wrapping was added - In FreeSurfer, MRML, vtkTeem CMakeLists.txt, target_link_libraries of wrapped libs and regular libs should be done exclusively.

Revision 12262  Directory Listing
Modified Sun Feb 28 21:57:16 2010 UTC (7 years, 6 months ago) by aylward
Original Path: trunk
ENH: vtkRegisterImage...Configure.h.in include vtkSlicerConfigure.h, but it wasn't needed.   Libraries and execs linked with MRML, but only needed ITK_LIBRARIES.   These changes allow this module to be compiled outside of Slicer.

Revision 12261  Directory Listing
Modified Sat Feb 27 18:33:33 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk
BUG: fixed 0000758: Mouse wheel/arrow buttons don't always browse through the image slices

Revision 12260  Directory Listing
Modified Fri Feb 26 18:38:50 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - In qVTKRenderView - Move pimpl method on the top

Revision 12259  Directory Listing
Modified Fri Feb 26 18:22:14 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: adapt to non-backward-compatible API change

Revision 12258  Directory Listing
Modified Fri Feb 26 18:21:47 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: handle dicom files with no orientation (multiframe)

Revision 12257  Directory Listing
Modified Fri Feb 26 16:14:34 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
COMP: remove locally defined abs function, this already exists somewhere else, use fabs from std.

Revision 12256  Directory Listing
Modified Fri Feb 26 16:01:50 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: attempt to set the path to tcsh on the configure line for itcl. If this doesn't work I'll have to add a custom command the calls another script with cmake -P.

Revision 12255  Directory Listing
Modified Fri Feb 26 15:12:57 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: add ability for a dashboard to override CMAKE_BUILD_TYPE with CTEST_BUILD_CONFIGURATION.

Revision 12254  Directory Listing
Modified Fri Feb 26 15:01:56 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
BUG: VolumeRendering: vtkGPUVolumeRayCastMapper handles XYZ (not RAS) coordinates for the cutting planes.

Revision 12253  Directory Listing
Modified Fri Feb 26 15:01:52 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
COMP: Python Integration - remove d, unused variable

Revision 12252  Directory Listing
Modified Fri Feb 26 14:27:59 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
BUG: Disable method loadArchetypeVolume from qSlicerCoreIOManager

Revision 12251  Directory Listing
Modified Fri Feb 26 14:06:00 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
ENH: a few tweaks requested by Andras - no negative window and one decimal point display

Revision 12250  Directory Listing
Modified Fri Feb 26 05:58:15 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - Add MRML dependency to QTCore/CMakeLists.txt

Revision 12249  Directory Listing
Modified Thu Feb 25 23:18:24 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
ENH: extra feedback when loading dicom data and BUG: fixed several cases of redundant processing and duplicate data in tree

Revision 12248  Directory Listing
Modified Thu Feb 25 23:03:38 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: propagate the active viewer to the Measurements module

Revision 12247  Directory Listing
Modified Thu Feb 25 23:02:42 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
STYLE: change to triples slashes for doxygen commenting

Revision 12246  Directory Listing
Modified Thu Feb 25 22:51:24 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
BUG: the Q_ASSERT caused Slicer to crash on linux64 when the qt module I had set as my home module wasn't loaded

Revision 12245  Directory Listing
Modified Thu Feb 25 22:36:26 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Add method loadArchetypeVolume to qSlicerCoreIOManager

Note, for now we link against the volumes module logic.

Later on, a module could register itself with the io manager.

Revision 12244  Directory Listing
Modified Thu Feb 25 22:36:22 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
BUG: Update CMake/Slicer3ModuleLogicMacros to not link against either SlicerQT libraries or BaseGUI library

Revision 12243  Directory Listing
Modified Thu Feb 25 22:36:19 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
BUG: Superbuild - Pass variable Slicer3_TCL_DIR to Slicer3 project and update Package/CMakeLists.txt to consider the variable.

Revision 12242  Directory Listing
Modified Thu Feb 25 22:36:14 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: Updated Superbuild script - Added PythonQt support. Also added more comments.

Note also that BUILD_SHARED_LIBS is noew forced to ON

On windows, make sure you installed a patch program.
Otrherwise, pythonQt won't be built.

Revision 12241  Directory Listing
Modified Thu Feb 25 22:33:49 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
COMP: Rename Slicer3_USE_CVS_HEAD into Slicer3_USE_VTK_CVSHEAD

Revision 12240  Directory Listing
Modified Thu Feb 25 22:21:26 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
COMP: fix missing brace.

Revision 12239  Directory Listing
Modified Thu Feb 25 22:20:36 2010 UTC (7 years, 6 months ago) by finetjul
Original Path: trunk
ENH: Use vtkGPURayCastMapper as a volume rendering.

Revision 12238  Directory Listing
Modified Thu Feb 25 21:57:43 2010 UTC (7 years, 6 months ago) by millerjv
Original Path: trunk
ENH: Removed the LoadingScene ivar as it seems to be duplicating the IsClosed ivar

Revision 12237  Directory Listing
Modified Thu Feb 25 21:49:27 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added qCTKPythonShell to qSlicerMainWindow.

An instance of the python shell is lazy created when the user use
the shortcut CTRL-P or when he clicks on "Window->Python Interactor"

Revision 12236  Directory Listing
Modified Thu Feb 25 21:49:23 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - Re-organize header includes. QT should be first, then qCTK, qVTK, qMRML, ITK, VTK, MRML, local includes and the last one the STD

Revision 12235  Directory Listing
Modified Thu Feb 25 21:49:20 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added SlicerPythonManager to qSlicerCoreApplication class

A new instance of the pythonManager is created when qSlicerCoreApplication is instanciated

Revision 12234  Directory Listing
Modified Thu Feb 25 21:49:16 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added QTCore/qSlicerPythonManager class and QTCore pythonqt decorator.

SlicerPythonManager is responsible to configure pythonQt by
 - adding the correct path containing the different wrapped libraries.
 - registering the pythonqt decorator
 - executing the python main script 'slicerqt.py'

Revision 12233  Directory Listing
Modified Thu Feb 25 21:49:09 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Add qVTKAsbtractPythonManager to qVTKWidgets

Revision 12232  Directory Listing
Modified Thu Feb 25 21:48:01 2010 UTC (7 years, 6 months ago) by millerjv
Original Path: trunk
BUG: loading scenes and restoring scene snapshots when linked controls are set.

Revision 12231  Directory Listing
Modified Thu Feb 25 21:44:20 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added Base/Python directory containing a set of python script loaded by the python shell.

slicerqt.py is the main script that should be executed by the python shell.

The scripts logic.py, mrml.py, remoteio.py, teem.py, freesurfer.py will
take care of loading the vtk libraries wrapped in python.

All the script will also be pre-compiled and copied in {Slicer_home}/bin/Python

Revision 12230  Directory Listing
Modified Thu Feb 25 21:43:30 2010 UTC (7 years, 6 months ago) by partyd
Original Path: trunk
ENH: mac comments for things that need to be fixed.

Revision 12229  Directory Listing
Modified Thu Feb 25 21:34:58 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added cmake script, diff files and PythonQtCMakeLists.txt allowing to patch PythonQT SVN head.

Revision 12228  Directory Listing
Modified Thu Feb 25 21:34:52 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: Classes in Libs/FreeSurfer are now python wrapped if VTK_WRAP_PYTHON is ON

The way TCL library dependencies were added has also been reviewed.

Revision 12227  Directory Listing
Modified Thu Feb 25 21:34:48 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: Classes in Libs/RemoteIO are now python wrapped if VTK_WRAP_PYTHON is ON

The way TCL library dependencies were added has also been reviewed.

Revision 12226  Directory Listing
Modified Thu Feb 25 21:34:42 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: Classes in Libs/vtkTeem are now python wrapped if VTK_WRAP_PYTHON is ON

The way TCL library dependencies were added has also been reviewed.

Revision 12225  Directory Listing
Modified Thu Feb 25 21:34:39 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: Classes in Libs/MRML are now python wrapped if VTK_WRAP_PYTHON is ON

The way TCL library dependencies were added has also been reviewed.

Revision 12224  Directory Listing
Modified Thu Feb 25 21:34:35 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: Classes in Base/Logic are now "python wrapped" if Slicer_USE_PYTHONQT is ON

The way TCL library dependencies were added has also been reviewed.

Revision 12223  Directory Listing
Modified Thu Feb 25 21:34:29 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added option Slicer3_USE_PYTHONQT to vtkSlicerConfigure.h.in

Revision 12222  Directory Listing
Modified Thu Feb 25 21:34:25 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added option Slicer3_USE_PYTHONQT to the main CMakeLists.txt

Note that PythonQt isn't yet included in the superbuild or the getbuildtest process.

Revision 12221  Directory Listing
Modified Thu Feb 25 21:34:19 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - In qSlicerAbstractModule, expose the member Name, Title, Category and Contributor to the meta-class using the Q_PROPERTY macro.

These property will be then visible from PythonQt

Revision 12220  Directory Listing
Modified Thu Feb 25 21:34:15 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added option qCTKWidgets_WRAP_PYTHON to qCTKWidgets/CMakeLists.txt

If this parameter is set to True in some top-level CMakeLists including CTK,
the script will attempt to find PythonQT.
After PythonQT is successfully discovered, the variable:
 qCTKWidgets_WRAP_PYTHON
 qCTKWidgets_PYTHONQT_INCLUDE_DIR
 qCTKWidgets_PYTHONQT_LIBRARIES
will be added to the cache. It means that other these variable will be
visible in other sub-project (for example qVTK and qMRML)

Revision 12219  Directory Listing
Modified Thu Feb 25 21:34:09 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added widget qCTKPythonShell and object qCTKAbstractPythonManager to CTK.

qCTKPythonShell imported from paraview, provided an interactive "shell" interfaced
to an embedded Python interpreter.

qCTKAsbtractPythonManager provded convenient method to interact with PythonQt singelton.
The method 'pythonPaths' should be overloaded to return a list of path
containing the different wrapped python libraries.
The method 'preInitialization()' should be overloaded to, for example, add decorator
or register call with PythonQt

the signal 'Initialized' could also be used to trigger the registration of
additional decorator and object.

Revision 12218  Directory Listing
Modified Thu Feb 25 21:34:04 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added widget qCTKConsoleWidgets to CTK. This widget, imported from paraview, provided an interactive console.

Revision 12217  Directory Listing
Modified Thu Feb 25 21:33:58 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Add cmake script FindPythonQt to qCTK/CMake directory

Revision 12216  Directory Listing
Modified Thu Feb 25 21:33:54 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Add method searchTargetInIntDir and executableExtension to qSlicerUtils class

Revision 12215  Directory Listing
Modified Thu Feb 25 21:33:50 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Update qSlicerCoreApplication test - After initialize() method is called - SlicerHome shouldn't be empty

Revision 12214  Directory Listing
Modified Thu Feb 25 21:33:46 2010 UTC (7 years, 6 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Add method isInstalled to qSlicerCoreApplication.

Return true is this instance of Slicer is running from an installed directory

Revision 12213  Directory Listing
Modified Thu Feb 25 18:42:01 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
ENH: improved feedback on dicom loading

Revision 12212  Directory Listing
Modified Thu Feb 25 17:27:47 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
ENH: reuse reader for performance and work on better progress feedback

Revision 12211  Directory Listing
Modified Thu Feb 25 16:58:10 2010 UTC (7 years, 6 months ago) by millerjv
Original Path: trunk
ENH: label the controller widgets in help popup

Revision 12210  Directory Listing
Modified Thu Feb 25 16:28:13 2010 UTC (7 years, 6 months ago) by millerjv
Original Path: trunk
ENH: trigger off data model not gui model to build SlicesGUI

Revision 12209  Directory Listing
Modified Thu Feb 25 16:21:57 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
ENH: add flag so that widgets wanting to 'claim' the left mouse button can register this with the slice GUI - if not, the default behavior can happen (window/level)

Revision 12208  Directory Listing
Modified Thu Feb 25 15:53:16 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
STYLE: typo

Revision 12207  Directory Listing
Modified Thu Feb 25 15:18:16 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
ENH: display window level in status text as feedback for user

Revision 12206  Directory Listing
Modified Thu Feb 25 15:10:50 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
ENH: add ability to edit window/level of background volume by dragging the left mouse button (response to bug 559)

Revision 12205  Directory Listing
Modified Thu Feb 25 14:14:53 2010 UTC (7 years, 6 months ago) by pieper
Original Path: trunk
BUG: turn off text when moving fiducial for better performance

Revision 12204  Directory Listing
Modified Thu Feb 25 00:02:57 2010 UTC (7 years, 6 months ago) by naucoin
Original Path: trunk
ENH: add a merge models CLI module. uses vtkAppendPolyData as posted by Daniel Haehn to the slicer users list

Revision 12203  Directory Listing
Modified Wed Feb 24 23:33:47 2010 UTC (7 years, 6 months ago) by millerjv
Original Path: trunk
BUG: SliceControllerWidgets in Slices module were not connected to a Slice node on scene load. (Actually they were connected and end up getting disconnected. Now watch scene load events to rewire the Slices module.) Also fixed changing the compare view settings and having the Slices module update the number of controllers.

Revision 12202  Directory Listing
Modified Wed Feb 24 23:24:36 2010 UTC (7 years, 6 months ago) by millerjv
Original Path: trunk
ENH: debugging statement

Revision 12201  Directory Listing
Modified Wed Feb 24 15:17:09 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk
COMP: Fixed compilation warning (Slicer3\Libs\Qdec\Testing\QdecUtilitiesTest1.cxx(23) : warning C4101: 'qdec' : unreferenced local variable)

Revision 12200  Directory Listing
Modified Wed Feb 24 01:19:10 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk
ENH: Added the "visibility" attribute to View nodes to control their visibility in the main Slicer window. For a short time the HideFromEditors property was used for the same purpose, but it is more appropriate to have a separate attribute for this.

Revision 12199  Directory Listing
Modified Tue Feb 23 22:42:39 2010 UTC (7 years, 6 months ago) by lassoan
Original Path: trunk
BUG: Fixed problem of having empty 3D viewer window when an old MRML file is loaded. The root cause of the problem was that before Slicer revision 10795 the View node was hidden from editors by default.

Revision 12198  Directory Listing
Modified Mon Feb 22 18:46:46 2010 UTC (7 years, 6 months ago) by hayes
Original Path: trunk
ENH: Removing old extensions

Revision 12197  Directory Listing
Modified Sun Feb 21 18:57:31 2010 UTC (7 years, 6 months ago) by aylward
Original Path: trunk
COMP: Supress warning on Windows about sscanf being unsafe

Revision 12196  Directory Listing
Modified Sun Feb 21 18:53:46 2010 UTC (7 years, 6 months ago) by aylward
Original Path: trunk
COMP: Supress warning on Windows about strcpy and sprintf being unsafe

Revision 12195  Directory Listing
Modified Sat Feb 20 20:39:37 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: In some of Base/Logic classes, change vtkTypeMacro into vtkTypeRevisionMacro and make use of macros vtkCxxRevisionMacro and vtkStandardNewMacro

Revision 12194  Directory Listing
Modified Sat Feb 20 20:39:31 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - In qSlicerTractographyFiducialSeedingModuleWidget, rename updateWidgetfromMRML into updateWidgetFromMRML.

Revision 12193  Directory Listing
Modified Sat Feb 20 20:39:28 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: Fix memory leak in vtkSlicerTractographyFiducialSeedingLogic by introducing the use of vtkSmartPointer

Revision 12192  Directory Listing
Modified Sat Feb 20 20:39:24 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: SlicerQT - Fix warnings related to Tractography module - Constructor of qSlicerTractographyFiducialSeedingModuleWidget was also missing call to superclass ctor.

Revision 12191  Directory Listing
Modified Sat Feb 20 18:49:23 2010 UTC (7 years, 7 months ago) by lassoan
Original Path: trunk
ENH: Added mhd to the supported file extension list

Revision 12190  Directory Listing
Modified Fri Feb 19 23:04:29 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
ENH: hook up the method to rotate slice planes to match the acquisition plane of the background volume

Revision 12189  Directory Listing
Modified Fri Feb 19 22:38:31 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
BUG: fix some typos in the volume rotation code (still a work in progress)

Revision 12188  Directory Listing
Modified Fri Feb 19 21:13:51 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
ENH: per bug 726: rotate slice display to match acquisition plane of volume (work in progress)

Revision 12187  Directory Listing
Modified Fri Feb 19 19:37:37 2010 UTC (7 years, 7 months ago) by lorensen
Original Path: trunk
ENH: Better positioning of the axis labels. ENH: If the length of a side of the bounding box is 0, the side is adjusted to 10% of the longest side.

Revision 12186  Directory Listing
Modified Fri Feb 19 19:34:30 2010 UTC (7 years, 7 months ago) by lorensen
Original Path: trunk
ENH: added snv:keywords.

Revision 12185  Directory Listing
Modified Fri Feb 19 18:12:37 2010 UTC (7 years, 7 months ago) by fedorov
Original Path: trunk
STYLE: remove console output

Revision 12184  Directory Listing
Modified Fri Feb 19 13:39:43 2010 UTC (7 years, 7 months ago) by lorensen
Original Path: trunk
ENH: Temporarily disable the camera reset when the bbox changes. The feature did not allow closeup browsing of slices.

Revision 12183  Directory Listing
Modified Fri Feb 19 02:15:19 2010 UTC (7 years, 7 months ago) by lassoan
Original Path: trunk
ENH: Don't show a vtkMRMLViewNode in the base Slicer GUI if the node's HideFromEditors property is true. This feature is necessary for displaying a private 3D view in a separate window (base Slicer GUI has to be prevented from displaying the same node in an other view, because having multiple view widgets for one view node cause infinite loop during rendering).

Revision 12182  Directory Listing
Modified Thu Feb 18 22:39:41 2010 UTC (7 years, 7 months ago) by millerjv
Original Path: trunk
ENH: Allow CompareView to be a startup layout

Revision 12181  Directory Listing
Modified Thu Feb 18 22:37:47 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
COMP: avoid warning about unused vars

Revision 12180  Directory Listing
Modified Thu Feb 18 22:36:18 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
COMP: avoid compiler warning about not using args

Revision 12179  Directory Listing
Modified Thu Feb 18 22:16:56 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
BUG: check for null pointers before printing out

Revision 12178  Directory Listing
Modified Thu Feb 18 21:57:24 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
ENH: adding some tests

Revision 12177  Directory Listing
Modified Thu Feb 18 19:57:30 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
COMP: get rid of compiler warnings

Revision 12176  Directory Listing
Modified Thu Feb 18 19:43:38 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - Since the parameter '--' is 'swallowed' by Slicer3 tcl launcher - Let's disable test qVTKCommandOptionsTest7

On windows platform, the parameter '--' is interpreted and not passed to the real
Slicer3 or SlicerQT executable.
See http://www.tcl.tk/man/tcl7.6/UserCmd/wish.1.html

Revision 12175  Directory Listing
Modified Thu Feb 18 19:02:25 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
COMP: mark unref formal params

Revision 12174  Directory Listing
Modified Thu Feb 18 18:58:04 2010 UTC (7 years, 7 months ago) by millerjv
Original Path: trunk
BUG: snapshot and scene restore bugs

Revision 12173  Directory Listing
Modified Thu Feb 18 18:49:58 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
BUG: can't create results without files on disk

Revision 12172  Directory Listing
Modified Thu Feb 18 18:30:06 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
COMP: comment out code that can't be reached, reducing compiler warnings

Revision 12171  Directory Listing
Modified Thu Feb 18 18:27:19 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
ENH: create crosshair node after scene snapshot restore, but only if node doesn't already exist with default crosshair name

Revision 12170  Directory Listing
Modified Thu Feb 18 18:27:02 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
COMP: removing compiler warning

Revision 12169  Directory Listing
Modified Thu Feb 18 18:14:03 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
COMP: test a bit more

Revision 12168  Directory Listing
Modified Thu Feb 18 17:01:02 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
COMP: reducing compiler errors. Also removed asserts as they crash all of Slicer. Conversion to doxygen comment style

Revision 12167  Directory Listing
Modified Thu Feb 18 15:58:02 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
ENH: extra diagnostic output for exension server

Revision 12166  Directory Listing
Modified Thu Feb 18 15:19:04 2010 UTC (7 years, 7 months ago) by millerjv
Original Path: trunk
ENH: queue up modified events when configuring compare view

Revision 12165  Directory Listing
Modified Wed Feb 17 23:17:12 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - add a new widget: qCTKDynamicSpacer that has a dynamic size policy depending on the activate slot.
This could be usefull when you want the size policy of a spacer to depends of some conditions.
Example: one wants the spacer to take no space when a collapsible button is expanded. but when the collapsible button is closed, you want the spacer to be expanded.

Revision 12164  Directory Listing
Modified Wed Feb 17 23:17:04 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt - qSlicerModulePanel. Change sizePolicy for the Help Panel. Give a stretch to 1 to the modules
Some modules want to take as much space as available, but when they are closed, you want the spacer to take all the space to stack up the help and module section on top of the module panel. this is why we give a stretch to 1 for the module
The Help section doesn't need to grow, nor to be shrinked, its sizehint should be respected: set the vertical policy to Fixed

Revision 12163  Directory Listing
Modified Wed Feb 17 21:30:14 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
ENH: Enable Jim's compare view test

Revision 12162  Directory Listing
Modified Wed Feb 17 21:28:24 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
BUG: fix typo in scene name and avoid leaks on exit

Revision 12161  Directory Listing
Modified Wed Feb 17 20:26:41 2010 UTC (7 years, 7 months ago) by fedorov
Original Path: trunk
BUG: widget is initialized before it is created

Revision 12160  Directory Listing
Modified Wed Feb 17 19:26:52 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
ENH: don't create a slice widget for a slice gui until both the logic and the slice node have been created

Revision 12159  Directory Listing
Modified Wed Feb 17 19:01:07 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
ENH: adding a test for the observer manager

Revision 12158  Directory Listing
Modified Wed Feb 17 17:32:54 2010 UTC (7 years, 7 months ago) by millerjv
Original Path: trunk
ENH: new test added that illustrates a crash restoring a scene snapshot that has a compare view

Revision 12157  Directory Listing
Modified Wed Feb 17 17:06:19 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
ENH: use the newly provided SetUniformScale call to scale glyphs. Don't have or need a GetScale, as the scale is stored in the mrml node

Revision 12156  Directory Listing
Modified Wed Feb 17 16:16:54 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - replace qCTKMenuButton::extraMenu by QPushButton::menu

Revision 12155  Directory Listing
Modified Wed Feb 17 16:14:51 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - copy qCTKMenuButton to the Attic as it uses an extraMenu instead of QPushButton::menu.

Revision 12154  Directory Listing
Modified Wed Feb 17 04:25:55 2010 UTC (7 years, 7 months ago) by alexy
Original Path: trunk
ENH: added eigenvalues for DTI math module

Revision 12153  Directory Listing
Modified Wed Feb 17 01:01:11 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt - fix failing test qVTKObjectTest1

Revision 12152  Directory Listing
Modified Wed Feb 17 00:53:44 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - add a tracking property to qCTKSliderSpinBoxWidget
When tracking is ON: valueIsChanging() and valueChanged() are fired anytime the slider or the spinbox are modified
When tracking is OFF: valueIsChanging() is fired anytime the slider or spinbox or modified. valueChanged() is only fired when the mouse button used to modify the value on the slider or spinbox is released

Revision 12151  Directory Listing
Modified Wed Feb 17 00:53:40 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - expose to the API the signals sliderPressed() and sliderReleased()

Revision 12150  Directory Listing
Modified Tue Feb 16 23:30:57 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
BUG: unregister observers if sent a null node

Revision 12149  Directory Listing
Modified Tue Feb 16 22:48:52 2010 UTC (7 years, 7 months ago) by alexy
Original Path: trunk
ENH:  moved mrml events handling in logic for Qt Tractography module

Revision 12148  Directory Listing
Modified Tue Feb 16 19:48:51 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
ENH: speed up dicom directory parsing by re-using the vtkITK reader rather than making a New one for each file

Revision 12147  Directory Listing
Modified Tue Feb 16 19:11:33 2010 UTC (7 years, 7 months ago) by alexy
Original Path: trunk
BUG_FIXED: fixed transforms multiplication order

Revision 12146  Directory Listing
Modified Tue Feb 16 18:23:43 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - Add a qvtkDisconnectAll to remove all the connections

Revision 12145  Directory Listing
Modified Tue Feb 16 18:23:39 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - remove the map that stores the connections in qVTKObjectEventsObserver, but use the children list instead.

Revision 12144  Directory Listing
Modified Tue Feb 16 14:11:43 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
COMP: SlicerQt - remove warning (shadow variable)

Revision 12143  Directory Listing
Modified Mon Feb 15 21:36:34 2010 UTC (7 years, 7 months ago) by lorensen
Original Path: trunk
ENH: added svn keywords.

Revision 12142  Directory Listing
Modified Mon Feb 15 21:35:35 2010 UTC (7 years, 7 months ago) by lorensen
Original Path: trunk
ENH: added svn keywords.

Revision 12141  Directory Listing
Modified Mon Feb 15 21:34:06 2010 UTC (7 years, 7 months ago) by lorensen
Original Path: trunk
ENH: added svn keywoard.

Revision 12140  Directory Listing
Modified Mon Feb 15 21:30:48 2010 UTC (7 years, 7 months ago) by lorensen
Original Path: trunk
ENH: added svn keywoard.

Revision 12139  Directory Listing
Modified Mon Feb 15 20:08:31 2010 UTC (7 years, 7 months ago) by alexy
Original Path: trunk
BUG_FIXED: initialize fix

Revision 12138  Directory Listing
Modified Mon Feb 15 19:12:51 2010 UTC (7 years, 7 months ago) by alexy
Original Path: trunk
ENH:  changed events handling in Qt Tractography module

Revision 12137  Directory Listing
Modified Mon Feb 15 18:05:57 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: VolumeRendering: try to remove memory leaks in the Volume Rendering.

Revision 12136  Directory Listing
Modified Mon Feb 15 18:05:53 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: Add unit test for vtkSlicerModelsGUI

Revision 12135  Directory Listing
Modified Mon Feb 15 18:05:49 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
BUG: Models Module - fixed a memory leak caused after a Hierarchy Node has been created.

Revision 12134  Directory Listing
Modified Mon Feb 15 17:54:37 2010 UTC (7 years, 7 months ago) by lorensen
Original Path: trunk
ENH: Box axis and labels now resize when actors are added or changed to the 3D window.

Revision 12133  Directory Listing
Modified Sat Feb 13 18:39:56 2010 UTC (7 years, 7 months ago) by taox
Original Path: trunk
BUG: when you loaded a label map, everything loaded after than was a lable map. This is fixed now.

Revision 12132  Directory Listing
Modified Sat Feb 13 18:18:56 2010 UTC (7 years, 7 months ago) by vrnova
Original Path: trunk
ENH: added a new GUI entry for upcoming vtk edge gpu ray casting mapper

Revision 12131  Directory Listing
Modified Sat Feb 13 18:00:09 2010 UTC (7 years, 7 months ago) by alexy
Original Path: trunk
ENH:  changed events handling in Qt Tractography module

Revision 12130  Directory Listing
Modified Fri Feb 12 22:51:12 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - add qCTKButtonGroup, a QButtonGroup that allows a state of unchecked button.
If an already checked button is clicked again, it unchecks the button.

Revision 12129  Directory Listing
Modified Fri Feb 12 21:18:51 2010 UTC (7 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: fixing a null pointer problem: if volumes are added to a timeseries before the bundlenode is created, slicer crashes. In this fix, we check whether the node is NULL, and if so, a new node is created before assigning values to it.

Revision 12128  Directory Listing
Modified Fri Feb 12 21:02:26 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
BUG: make command line module ScaleWithEntry widgets accept the typed in value even if return key was not typed

Revision 12127  Directory Listing
Modified Fri Feb 12 20:17:19 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - In FiducialTractographySeeding module UI, the ShowHidden was set to False whereas the HideFromEditor property from the node was set to true.

That explains why the node wasn't visible after the user clicked on the Add button.

Note: We will add a developer warning in case the NodeType associated to the nodeSelector
corresponds to a node with HideFromEditor set to true.

Revision 12126  Directory Listing
Modified Fri Feb 12 20:17:12 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - Remove extra comment

Revision 12125  Directory Listing
Modified Fri Feb 12 20:17:03 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - Reformat TractographyFiducialSeeding code

Revision 12124  Directory Listing
Modified Fri Feb 12 20:16:55 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - In qMRMLNodeFactory, use Q_ASSERT_X instead of Q_ASSERT
to tell the developer the NodeType he tried to register failed.

Revision 12123  Directory Listing
Modified Fri Feb 12 20:16:47 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - In Tractography module, node registration is now done in the virtual method RegisterNodes associated with vtkSlicerLogic

This ensures the node are registered in the QtOnly application.

Revision 12122  Directory Listing
Modified Fri Feb 12 20:09:47 2010 UTC (7 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
BUG: removed the filename-based heuristics applied in CalculateStatisticsAutoLevels method -- this addresses mantis bug 716. A smarter way to apply color luts and win/lev/thresh should be used here. Marked the location in code with comment recommending different treatment (I believe only QueryAtlas was using this method.)

Revision 12121  Directory Listing
Modified Fri Feb 12 17:33:26 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - Adding the 'Add', 'Edit' and 'Remove' action in the current qCTKAddRemoveComboBox reveals to be cumbersome

Revision 12120  Directory Listing
Modified Fri Feb 12 14:34:23 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
BUG: avoid crash when printing nulls

Revision 12119  Directory Listing
Modified Fri Feb 12 00:34:27 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
ENH: report python errors and results for command invoke via vtkSlicerApplicationGUI

Revision 12118  Directory Listing
Modified Thu Feb 11 23:40:38 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
BUG: clear out lingering grabs by widgets that have been deleted

Revision 12117  Directory Listing
Modified Thu Feb 11 22:58:53 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
BUG: don't escape spaces with backslashes on windows

Revision 12116  Directory Listing
Modified Thu Feb 11 19:47:35 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
COMP: SlicerQt - remove warning - invalid conversion from int to unsigned long.

Revision 12115  Directory Listing
Modified Thu Feb 11 19:17:53 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
COMP: vtkMRMLScene::SceneCallback - Remove unused variable warnings.

Revision 12114  Directory Listing
Modified Thu Feb 11 19:10:37 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
COMP: compilation error on Windows, qVTKObjectTest doesn't need to be exported (only used in local).
the export macro was wrongly used, the Testing project was not correctly configurated to use this macro. A new macro (and associated qVTKWidgetsTestingExport file) should have been created specially for this class. However the scope of this class is only local, this is why we removed it.

Revision 12113  Directory Listing
Modified Thu Feb 11 18:35:07 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
BUG: remove manual call to ProcessReadData since it should be automatically triggered by the vtkSlicerApplicationLogic and shouldn't need to be called from the test.  Also add error message if data read times out

Revision 12112  Directory Listing
Modified Thu Feb 11 18:17:37 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: Add a test in vtkMRMLSceneTest2 to check if vtkMRMLScene::NodeRemovedEvent are actually fired in the destructor.

Revision 12111  Directory Listing
Modified Thu Feb 11 18:17:34 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
BUG: The GUICallbackCommand of vtkSlicerCamerasGUI was not destroyed when the cameras module was destructed.
This leaded into a crash when a vtkMRMLCameraNode was throwing an ActiveTagModifiedEvent. The callback tried to call access the already destroyed module.

Revision 12110  Directory Listing
Modified Thu Feb 11 18:17:30 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: Slicer - vtkMRMLScene invoke NodeRemovedEvent in destructor

Revision 12109  Directory Listing
Modified Thu Feb 11 18:10:10 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
BUG: call new on the smart pointer

Revision 12108  Directory Listing
Modified Thu Feb 11 18:07:51 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
BUG: call new on the mini scene smart pointer, seems to get rid of gui leaks when reading back a scene

Revision 12107  Directory Listing
Modified Thu Feb 11 17:02:49 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
BUG: include configure header so Slicer3_USE_KWWIDGETS will be defined

Revision 12105  Directory Listing
Modified Thu Feb 11 16:19:31 2010 UTC (7 years, 7 months ago) by casey.goodlett
Original Path: trunk
COMP: Fix compilation problems on 64-bit linux.

min and max were added to vtkITKNumericTraits, but they did not include a parameterless version.

Revision 12104  Directory Listing
Modified Thu Feb 11 15:30:44 2010 UTC (7 years, 7 months ago) by taox
Original Path: trunk
ENH: delete volume node when idle.

Revision 12103  Directory Listing
Modified Thu Feb 11 14:13:59 2010 UTC (7 years, 7 months ago) by harveerar
Original Path: trunk
BUG:added support for __int64 and long long

Revision 12102  Directory Listing
Modified Thu Feb 11 03:56:43 2010 UTC (7 years, 7 months ago) by taox
Original Path: trunk
ENH: give user option to choose whether to leave previous/next in memory.

Revision 12101  Directory Listing
Modified Thu Feb 11 03:40:44 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: Update CMake/Slicer3findQT.cmake to include QTTEST if Slicer3_BUILD_TESTING is enabled

Revision 12100  Directory Listing
Modified Thu Feb 11 03:40:40 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - Change header comment from "std includes" to "STD includes"

Revision 12099  Directory Listing
Modified Thu Feb 11 03:40:29 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Add designer plugin qCTKAddRemoveComboBoxPlugin

Revision 12098  Directory Listing
Modified Thu Feb 11 03:40:24 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Debug message in qMRMLNodeFactory are more verbose

Revision 12097  Directory Listing
Modified Thu Feb 11 03:40:20 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Add printAdditionnalInfo method to qMRMLNodeSelector

Revision 12096  Directory Listing
Modified Thu Feb 11 03:07:31 2010 UTC (7 years, 7 months ago) by taox
Original Path: trunk
ENH: added capability to load previous/next file in a directory. All images kept in memory.

Revision 12095  Directory Listing
Modified Wed Feb 10 23:56:06 2010 UTC (7 years, 7 months ago) by sylvain
Original Path: trunk
COMP: remove MRIBiasFieldCorrection as it is now a command line module (see Applications/CLI). The duplication of this module caused a crash when closing Slicer because MRIBiasFieldCorrection was deleted twice. Julien suggested that a better fix would be in the Slicer deletion mechanism since deletion should not be based only on the name/title of the module.

Revision 12094  Directory Listing
Modified Wed Feb 10 21:25:33 2010 UTC (7 years, 7 months ago) by lassoan
Original Path: trunk
BUG: Fixed SunOS error (launch_SetEnvironment failed: can't read "::SlicerBinaryBitness": no such variable)

Revision 12093  Directory Listing
Modified Wed Feb 10 19:12:29 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: adjust Slicer External_Project dependencies.

Revision 12092  Directory Listing
Modified Wed Feb 10 16:02:08 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: fix typo.

Revision 12091  Directory Listing
Modified Wed Feb 10 16:01:29 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: further cleanup of python dependent library cleanup and fixes to slicers build command.

Revision 12090  Directory Listing
Modified Wed Feb 10 15:38:43 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - add test for qVTKObject,

Revision 12089  Directory Listing
Modified Wed Feb 10 15:31:28 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: more logic improvements for controlling if python and KWWidgets are being built and used by Slicer.

Revision 12088  Directory Listing
Modified Wed Feb 10 14:31:09 2010 UTC (7 years, 7 months ago) by ibanez
Original Path: trunk
ENH: Removing unnecessary comma separators in the last elements of enum declaration. They produce compilation problems in SunOS.

Revision 12087  Directory Listing
Modified Wed Feb 10 01:07:04 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt - remove typo

Revision 12086  Directory Listing
Modified Wed Feb 10 01:04:51 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - Refactorization in qVTKObjectEventsObserver, qVTKConnections and qVTKObject
As it has been decided that only 1 class should have the QVTK_Object macro, only 1 instance of qVKTObjectEventsObserver is needed. The inherited classes can access it normally.

qVTKObjectEventObserver doesn't need to have a parent set to be working, remove it.
There is no recursion needed to block connections.
Rename qVTKConnection::Establish into qVTKConnection::setEnabled
Use lowercase for the first letter of the methods in qVTKConnection
Refactorize the loops over the connections (now use QList<qVTKConnections> findConnections())
Move some private implementations into the pimpl.

Revision 12085  Directory Listing
Modified Wed Feb 10 01:04:43 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
STYLE: SlicerQt - Remove useless include from qVTKObject.h. Propagate changes into implementation files that needed these headers.

Revision 12084  Directory Listing
Modified Tue Feb 9 20:46:35 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
STYLE: remove stray comma

Revision 12083  Directory Listing
Modified Tue Feb 9 20:09:18 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: In launch.tcl.in, condition to set QtDesignerPlugins_BUILD_SUBDIR was incorrect

Revision 12082  Directory Listing
Modified Tue Feb 9 19:57:34 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: Update launch.tcl.in to update properly QT_PLUGIN_PATH with ConfigurationType (Debug, Release, ..) when required.

Revision 12081  Directory Listing
Modified Tue Feb 9 19:41:38 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - move block all connections functionality into the Attic

Revision 12080  Directory Listing
Modified Tue Feb 9 19:28:11 2010 UTC (7 years, 7 months ago) by vrnova
Original Path: trunk
BUGFIX: fixed possible crash when internal parameter node is null

Revision 12079  Directory Listing
Modified Tue Feb 9 19:03:07 2010 UTC (7 years, 7 months ago) by vrnova
Original Path: trunk
ENH: new feature to pause volume rendering module in scene loading (requested by Ron)

Revision 12078  Directory Listing
Modified Tue Feb 9 17:59:05 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Add missing QCTK_WIDGETS_EXPORT to qCTKTestApplication

Revision 12077  Directory Listing
Modified Tue Feb 9 14:22:29 2010 UTC (7 years, 7 months ago) by lassoan
Original Path: trunk
ENH: Exit with error whenever something fails in the launcher
STYLE: Changed exit code magic numbers to named constants

Revision 12076  Directory Listing
Modified Tue Feb 9 13:10:37 2010 UTC (7 years, 7 months ago) by lassoan
Original Path: trunk
BUG: Return error if launching fails (the error was only logged, but the return value was 0)

Revision 12075  Directory Listing
Modified Tue Feb 9 12:46:41 2010 UTC (7 years, 7 months ago) by lassoan
Original Path: trunk
BUG: Fixed the script so that now it can tolerate if LAUNCHER_REPORT_VTK_ERRORS CMake variable is not set (happens most probably if slicer variables file is not updated)

Revision 12074  Directory Listing
Modified Tue Feb 9 05:49:13 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Add tests for qCTKAddRemoveComboBoxTest1.cxx

Revision 12073  Directory Listing
Modified Tue Feb 9 05:49:08 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - Update comments in qVTKCommandOptions

Revision 12072  Directory Listing
Modified Tue Feb 9 05:49:04 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: Update CTestCustom.cmake.in to exclude shadows warning when two QT foreach loop are combined

Revision 12071  Directory Listing
Modified Tue Feb 9 05:49:00 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - in qCTKTestApplication, added macro QCTK_DECLARE_TEST, QCTK_RUN_TEST and QCTK_EXIT_TEST

In case test required an active QT loop, it's now easy to implement them
using the following syntax:

where the name of the test is: qCTKAddRemoveComboBoxTest1


// qCTK includes
#include "OBJECT_TO_TEST.h"
#include "qCTKTestApplication.h"

// STL includes
#include <stdlib.h>
#include <iostream>

QCTK_DECLARE_TEST(qCTKAddRemoveComboBoxTest1)
{
  qCTKAddRemoveComboBox qctkObject;
  int currentCount = qctkObject.count();
  if (currentCount != 0)
    {
    qctkObject.printAdditionalInfo();
    std::cerr << "Error in count() - Expected: 0, current:" << currentCount << std::endl;
    QCTK_EXIT_TEST(EXIT_FAILURE);
    }

  // more tests ...

  QCTK_EXIT_TEST(EXIT_SUCCESS);
}

QCTK_RUN_TEST(qCTKAddRemoveComboBoxTest1);

Revision 12070  Directory Listing
Modified Tue Feb 9 05:48:53 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
STYLE: In qCTkAddRemoveComboBox and qMRMLNodeSelector, remove extra comment and fix 'shadow variable' warnings.

Revision 12069  Directory Listing
Modified Tue Feb 9 01:17:44 2010 UTC (7 years, 7 months ago) by lassoan
Original Path: trunk
BUG: Fixed launcher error (non-QT Slicer doesn't start because missing QT paths)
ENH: All launcher scripts are in procedures and errors are captured and properly reported (more robust to any script error)
ENH: New launcher option (--no-error-popup) to not display errors in a popup (log only)
ENH: Use --no-error-popup for EMSegment tests that are expected to fail (to not confuse the user with error popups)
ENH: Added new slicer variable (::LAUNCHER_REPORT_VTK_ERRORS) to allow reporting of VTK errors as failed tests on the dashboard. By default it is turned off now. Set it to ON to capture more errors.

Revision 12068  Directory Listing
Modified Mon Feb 8 23:28:44 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - add prefix and suffix properties to qCTKSliderSpinBoxWidget

Revision 12067  Directory Listing
Modified Mon Feb 8 23:18:34 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - Add the "decimals" property to qCTKSliderSpinBoxWidget. The number of decimals was previously set by setSingleStep. We want to let the user decide how many decimals to display.
Note: the number of decimals to display impacts the value of qCTKSliderSpinBoxWidget:
Example:
setDecimals(1);
setValue(32.578);
value() == 32.6 and not 32.578

Revision 12066  Directory Listing
Modified Mon Feb 8 22:40:25 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - For now, to avoid compilation probs, let's disable python support in QTCLI.

Revision 12065  Directory Listing
Modified Mon Feb 8 22:29:08 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: made many additions so that turning on Qt should properly configure VTK and Slicer.

Revision 12064  Directory Listing
Modified Mon Feb 8 20:39:12 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added test exercising --ignore-rest flags of qVTKCommandOptions

Revision 12063  Directory Listing
Modified Mon Feb 8 20:11:39 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - qSlicerCoreApplication now handles --ignore-rest flags

Revision 12062  Directory Listing
Modified Mon Feb 8 20:11:35 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - Attempt to fix test qVTKCommandOptionsTest{4,5} on windows

Revision 12061  Directory Listing
Modified Mon Feb 8 20:11:32 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added --ignore-rest flags to qVTKCommandOptions

If ignoreRest() returns true, the method ignoredArguments() will return
the list of ignored arguments.

Use:
  ./MyApp --option1=foo -- --what=nothing important

ignoreRest() will return True
ignoredArguments() will return ["--what=nothing", "important"]

Revision 12060  Directory Listing
Modified Mon Feb 8 19:15:49 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
BUG: wait for data to be read, triggering the process read queue manually

Revision 12059  Directory Listing
Modified Mon Feb 8 18:35:11 2010 UTC (7 years, 7 months ago) by awiles
Original Path: trunk
ENH: Adding a new module.

Revision 12058  Directory Listing
Modified Mon Feb 8 18:22:59 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: remove some unnecessary code and add more logic for controlling options that are enabled.

Revision 12057  Directory Listing
Modified Mon Feb 8 18:19:18 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - In vtkSlicerApplication, set CoreCommandOptions of the associated qSlicerApplication

Revision 12056  Directory Listing
Modified Mon Feb 8 15:18:43 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - Waiting to fix the problem with the qSlicerCLILoadableModuleFactory, used QDir::tempPath() instead of qSlicerCoreCommandOptions::tempDirectory() one.

Revision 12055  Directory Listing
Modified Mon Feb 8 14:46:23 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: add back some comments that were mistakenly removed by jcfr.

Revision 12054  Directory Listing
Modified Mon Feb 8 14:08:52 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: cleanup option comments.

Revision 12053  Directory Listing
Modified Mon Feb 8 08:09:18 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added qSlicerCLILoadableModule class

qSlicerCLILoadableModule overloads the method 'entryPoint' which
returns the module entry point as a String.

Revision 12052  Directory Listing
Modified Mon Feb 8 08:09:12 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Remove tempDirectory method from qSlicerCoreApplication

Revision 12051  Directory Listing
Modified Mon Feb 8 08:09:08 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: SlicerQT - In qVTKCommandOptions - Fix 'shadow variable' warnings

Revision 12050  Directory Listing
Modified Mon Feb 8 08:09:05 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: SlicerQT - In qSlicerCoreApplication, exclude deprecated method when Slicer3_USE_KWWIDGETS is OFF

Revision 12049  Directory Listing
Modified Mon Feb 8 08:09:01 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: Add Slicer3_USE_KWWIDGETS to vtkSlicerConfigure.h.in

Revision 12048  Directory Listing
Modified Mon Feb 8 08:08:57 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Add method 'tempDirectory()' to qSlicerCoreCommandOptions.

Return temp directory
Try to read the value from the setting, if no value is found it defaults to
the value returned by QDir::tempPath()
See http://qt.nokia.com/doc/4.6/qdir.html#tempPath

Revision 12047  Directory Listing
Modified Mon Feb 8 03:22:03 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - Fix arguments for test qVTKCommandOptionsTest{4, 5}

Revision 12046  Directory Listing
Modified Mon Feb 8 03:21:59 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - In qVTKCommandOptions, make sure the object created by 'mapQStringListPtrToStringVectorPtr()' are deleted.

Revision 12045  Directory Listing
Modified Mon Feb 8 02:53:22 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added tests for qVTKCommandOptions

Revision 12044  Directory Listing
Modified Mon Feb 8 02:49:50 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - In qVTKCommandOptions, added method addArgument for QStringList.

Revision 12043  Directory Listing
Modified Mon Feb 8 02:49:46 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added qCTKTestApplication - Wrapper around QApplication allowing to write UI test. (imported from Paraview)

Revision 12042  Directory Listing
Modified Mon Feb 8 02:49:42 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - qCTKWidgets/Testing - Remove extra headers

Revision 12041  Directory Listing
Modified Mon Feb 8 02:49:35 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: Added function qListToSTLVector and stlVectorToQList to qCTKUtils - Also added Tests

Revision 12040  Directory Listing
Modified Mon Feb 8 02:49:29 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - Update the license of qCTKWidgets/Testing/*

Revision 12039  Directory Listing
Modified Mon Feb 8 00:52:16 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - Add alignment property to the spinbox in qCTKSliderSpinBoxWidget

Revision 12038  Directory Listing
Modified Sun Feb 7 22:29:00 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
COMP: SlicerQt - fix warning: unused variable

Revision 12037  Directory Listing
Modified Sun Feb 7 21:57:51 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - Add support for filtering sub node types in qMRMLNodeSelector.

Revision 12036  Directory Listing
Modified Sun Feb 7 15:52:16 2010 UTC (7 years, 7 months ago) by ibanez
Original Path: trunk
COMP: Fixing warning about SourImage function argument shadowing the member variable fo the same name.

Revision 12035  Directory Listing
Modified Sun Feb 7 15:51:22 2010 UTC (7 years, 7 months ago) by ibanez
Original Path: trunk
COMP: Fixing warning messages about "i" variables shadowing the "i()" method. Naming a method "i()" is a really bad idea, for a matrix library..

Revision 12034  Directory Listing
Modified Sun Feb 7 05:37:53 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt - when removing a connection, the connection was deleted but its id was queried after the connection was deleted.

Revision 12033  Directory Listing
Modified Sun Feb 7 04:12:44 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - Synchronize attributes between qMRMLNodeSelector and qMRMLNodeFactory.

Revision 12032  Directory Listing
Modified Sun Feb 7 03:33:55 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: Add Attribute filtering into qMRMLNodeSelector.

Revision 12031  Directory Listing
Modified Sat Feb 6 16:51:57 2010 UTC (7 years, 7 months ago) by alexy
Original Path: trunk
ENH:  add models to Qt Tractography module

Revision 12030  Directory Listing
Modified Sat Feb 6 16:18:47 2010 UTC (7 years, 7 months ago) by alexy
Original Path: trunk
ENH:  events handling in Qt Tractography module

Revision 12029  Directory Listing
Modified Sat Feb 6 01:02:34 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: Fix compilation warnings

Revision 12028  Directory Listing
Modified Fri Feb 5 23:53:22 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: Update launch.tcl.in - Added the QT_BINARY_BIN to the path, Added options "--designer"

There are now the following way to start Qt Designer:

./Designer.py
or
./Slicer3 --designer
or
./Slicer3 --launch NAME_OF_QT_PROGRAM

NAME_OF_QT_PROGRAM could designer (linux), Designer.app (Darwin) or
any qt executable located in QT_BINARY_DIR)

Revision 12027  Directory Listing
Modified Fri Feb 5 23:53:17 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: Fix various compilation warning

Revision 12026  Directory Listing
Modified Fri Feb 5 22:06:48 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: add improved options for controlling Fortran based third party libraries and for including Qt.

Revision 12025  Directory Listing
Modified Fri Feb 5 21:24:25 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: remove unecessary python dependencies.

Revision 12024  Directory Listing
Modified Fri Feb 5 21:07:54 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: since Modules can be linked with a separate Logic library. Let's make sure the TCL_init function of the logic library is called.

That is achieved by adding to the GUI header:
// Had to add this to force loading of these support libraries
// Only libraries with entries that will be dynamically called from TCL need to be instantiated
#include "vtkTcl.h"
extern "C" int VtkslicerLOGIC_NAMEmodulelogic_Init(Tcl_Interp *interp);

where LOGIC_NAME should be uppercase.

And the following to the constructor of the GUI:


  // Try to load supporting libraries dynamically.  This is needed
  // since the toplevel is a loadable module but the other libraries
  // didn't get loaded
  Tcl_Interp* interp = this->GetApplication()->GetMainInterp();
  if (interp)
    {
    VtkslicerLOGIC_NAMEmodulelogic_Init(interp);
    }
  else
    {
    vtkErrorMacro("Failed to obtain reference to application TCL interpreter");
    }

Revision 12023  Directory Listing
Modified Fri Feb 5 21:07:46 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: Fix vtkTypeRevisionMacro in vtkSlicerVolumesLogic. Add vtkSlicerModuleLogic instead of vtkObject

Revision 12022  Directory Listing
Modified Fri Feb 5 20:37:09 2010 UTC (7 years, 7 months ago) by hjohnson
Original Path: trunk
ENH:  Improved installation process for standalone builds.

Revision 12021  Directory Listing
Modified Fri Feb 5 19:37:34 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - In qCTKSliderSpinBoxWidget, when the property AutoSpinBoxWidth was turn off, the size of the spinbox was not reset.

Revision 12020  Directory Listing
Modified Fri Feb 5 19:37:31 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: New property in qCTKSliderSpinBoxWidget: AutoSpinBoxWidth
The qCTKSliderSpinBoxWidget is an association of a QSlider and a QSpinbox. When the widget is added into a layout with other qCTKSliderSpinBoxWidgets, the spinboxes were not aligned if they have a different max number of figures to show.
When AutoSpinBoxWidth is true, the width of the qCTKSliderSpinBoxWidget QSpinBoxes of the same parent are synchronized. The max width is used.

Revision 12019  Directory Listing
Modified Fri Feb 5 18:30:59 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
COMP: make python depend on both tcl and tk so that tkinter builds properly.

Revision 12018  Directory Listing
Modified Fri Feb 5 17:23:48 2010 UTC (7 years, 7 months ago) by alexy
Original Path: trunk
ENH: made ROI widget in volume rendering to adjust slider ranges on Fit to Volume

Revision 12017  Directory Listing
Modified Fri Feb 5 16:09:30 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: instead of downloading an external Slicer source tree we will now use the current Source Tree.

Revision 12016  Directory Listing
Modified Fri Feb 5 16:04:35 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: Fix various compilation warnings

Revision 12015  Directory Listing
Modified Fri Feb 5 15:11:40 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: In AtlasCreator CMakeLists.txt, add vtkSlicerAtlasCreatorModuleLogic to the target library and remove vtkSlicerModelMirrorModuleLogic ones.

Revision 12014  Directory Listing
Modified Fri Feb 5 15:05:05 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
COMP: adjust slicer's dependencies on fortran third party libraries if they are built or not.

Revision 12013  Directory Listing
Modified Fri Feb 5 14:55:53 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
COMP: attempt to detect if there is a Fortran Compiler and add logic to enable third party libraries if there is a Fortran Compiler.

Revision 12012  Directory Listing
Modified Fri Feb 5 14:37:56 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: add cmake module to beable to automatically detect if there is a Fortran Compiler and then optionally build Fortran dependent Slicer third party libraries.

Revision 12011  Directory Listing
Modified Fri Feb 5 14:09:21 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: move StringFindRepleace to a more appropriate place in the top level CMake directory.

Revision 12010  Directory Listing
Modified Fri Feb 5 14:07:43 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: moving SlicerSuperBuild.cmake to its new home in the SuperBuild top level directory.

Revision 12009  Directory Listing
Modified Fri Feb 5 14:05:44 2010 UTC (7 years, 7 months ago) by partyd
Original Path: trunk
ENH: Creating a top level directory for CMake based Super Builds. To do a super build use the Slicer3\SuperBuild directory as your source directory.

Revision 12008  Directory Listing
Modified Fri Feb 5 06:56:51 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
BUG: don't try to bring up dialog if Tk is not available

Revision 12007  Directory Listing
Modified Fri Feb 5 06:35:11 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: Add vtkSlicerVolumeModuleLogic to FastMArchingSegmentation, MRAblation and ModelMirror

Revision 12006  Directory Listing
Modified Fri Feb 5 06:35:04 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: Fix various warnings

Revision 12005  Directory Listing
Modified Fri Feb 5 06:34:52 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: Move FetchMI module logic into a dedicated Logic sub-directory

Note: The node still need to be registered overloading RegisterNode() method

Revision 12004  Directory Listing
Modified Fri Feb 5 05:40:59 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: Add vtkSlicerVolumeModuleLogic dependency to  ChangeTracker, EMSegment, FourDAnalysis, FourDImage and ProstateNav module

Revision 12003  Directory Listing
Modified Fri Feb 5 05:40:48 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: Move AtlasCreator module logic into a dedicated Logic sub-directory

Note: The node still need to be registered overloaded RegisterNode() method.

Revision 12002  Directory Listing
Modified Fri Feb 5 04:57:56 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: Move ModelMirror module logic into a dedicated Logic sub-directory

Note: The node still need to be registered overloaded RegisterNode() method.

Revision 12001  Directory Listing
Modified Fri Feb 5 04:39:38 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: Fix various compilation warning

Revision 12000  Directory Listing
Modified Fri Feb 5 04:39:25 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: Move Volumes module logic into a dedicated Logic subdirectory

Revision 11999  Directory Listing
Modified Fri Feb 5 04:39:17 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
STYLE: Remove extra comments from Tractography/Logic/{CMakeLists.txt, *.h}

Revision 11998  Directory Listing
Modified Fri Feb 5 03:04:00 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: SlicerQT - launch.tcl.in is now configured to properly add QTLoadableModule, qCTKWidgets, qVTKWidgets and qMRMLWidgets libraries to the current process library path. QT_PLUGIN_PATH is also set properly.

Revision 11997  Directory Listing
Modified Fri Feb 5 03:03:48 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: SlicerQT - Updated install rules - QtDesigner plugins are now installed in lib/Slicer3/designer

Revision 11996  Directory Listing
Modified Fri Feb 5 03:03:33 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - Designer.py was unnecessarily setting PATH - only  QT_PLUGIN_PATH is required

Revision 11995  Directory Listing
Modified Fri Feb 5 03:03:24 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added command line option "--disable-loadable-module"

Revision 11994  Directory Listing
Modified Fri Feb 5 02:32:47 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - In qSlicerCoreApplication, now using auto_ptr to store the reference to CoreCommandOption, coreIOManager and ModuleManager.

Updated the associated test, coreCommandOption wasn't created nor assigned to
the qSlicerCoreApplication.

Revision 11993  Directory Listing
Modified Fri Feb 5 00:21:08 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
STYLE: SlicerQt - remove warning in qCTKMenuButton

Revision 11992  Directory Listing
Modified Thu Feb 4 23:48:47 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - when the qCTKMenuButton was down, the indicator area was down, it should stay up

Revision 11991  Directory Listing
Modified Thu Feb 4 23:46:52 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
BUG: wait for the CLI to complete before returning

Revision 11990  Directory Listing
Modified Thu Feb 4 22:40:58 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: SlicerQT - Since the QTloadable module 'volume' isn't complete. Let's remove it.

Revision 11989  Directory Listing
Modified Thu Feb 4 22:32:13 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
BUG: SlicerQT - QTCLI - Since the pimpl was a subclass of qSlicerWidget, calling this->mrmlScene() within
the Pimpl was returning 0. Changed qSlicerWidget into QObject to keep
the possibility of adding signal/slot and use QCTK_P to access the associated public
interface.

STYLE Also clean code and renamed updateMRML function into updateMRMLCommandLineModuleNode

Revision 11988  Directory Listing
Modified Thu Feb 4 22:32:08 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - Remove extra debug statement from qSlicerLoadableModuleFactory

Revision 11987  Directory Listing
Modified Thu Feb 4 22:32:02 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Updated qSlicerCoreApplication and qSlicerApplication to make use of qCTKSettings and qSlicerCommandOptions classes.

The method initialize now requires the parameter passed by reference: exitWhenDone.
If exitWhenDone is set to True, the user of qSlicerCoreApplication or qSlicerApplication
is responsible to exit the application.

This parameter is set to true when the application should exit before
it starts the event loop. For example, when the parameter: --version or --help
are added to the command line, the application should execute the corresponding
function and exit.

Added method 'settings' to qSlicerCoreApplication, internally this method
will instantiate the application settings is not already done.
The setting filename is generated using the ApplicationName (ie Slicer),
the organizationName (ie NAMIC), the minor and major version.

In qSlicerCoreApplication, the method 'disableSettings' will instantiate a new setting object, this
time the setting filename is the same + a suffice (ie "-disabled").

In qSlicerCoreApplication, the method 'handlePreApplicationCommandLineArguments'
query the its associated commandOptions object to start the appropriate action.
All non-gui related logic should be added in that method. Calling 'terminate()'
allows to set the ExitWhenDone flag to true, this former one is checked
just after initalize finishes. If True, the application exit.

Application/SlicerQT/Main.cxx has been updated to consider the NoSplash option.

Revision 11986  Directory Listing
Modified Thu Feb 4 22:31:54 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Updated vtkSlicerCLIModuleLogic - Now using qCTKUtils::stringListToArray method

Revision 11985  Directory Listing
Modified Thu Feb 4 22:31:49 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added qSlicerCoreCommandOptions and qSlicerCommandOptions

These objects represent a storage for Slicer options.

In class qSlicerCoreCommandOptions, initialize() is adding:
  --disable-cli-module
  --version
  --program-path
  --home


In class qSlicerCommandOptions, initialize() is adding:
  --no-splash

Revision 11984  Directory Listing
Modified Thu Feb 4 22:31:42 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added qVTKCommandOptions allowing to handle command line parameter in a standard fashion.

Note that this class is made to be subclassed. That way the method:
  intialize, disableCurrentSettings, wrongArgument, deprecatedArgument
could be overloaded

An interesting aspect is that the class is also working with QSettings,

For example:
  In settings file, there is the following property:  tmpDir=/tmp

class MyAppCommandOptions: public qVTKCommandOptions
{
public:
  QString TmpDir;

  QString tmpDir();
 void initialize()
  {
  Superclass::initialize();
  this->addArgument("--temp-dir", 0, &TmpDir, QDir::tmp())
  }

  ...
}

bash$ bin/SlicerQT --temp-dir=/home/mytmp

At run-time the application will be using the specified directory. In other
word the function .. options->tmpDir() will return "/home/mytmp"

Then, next time the application is restarted .. if no option is given,
the tmpDir() method will return the value stored in the setting file.

The following two parameters are available by default: --help and --disable-settings
--help will show the different available arguments

--disable-settings will call the virtual method 'disableCurrentSettings'.
The derived class a responsible to disable the settings. A possible way
could be to instanciate a settings object using a filename + '-disabled' suffix.
That way ... no parameter will be used.

Revision 11983  Directory Listing
Modified Thu Feb 4 22:31:36 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added vtkConfigureVersion.h.in containing #ifdef related to Slicer version.

It allows to expose the following variable to the code:
  Slicer3_VERSION_MAJOR
  Slicer3_VERSION_MINOR
  Slicer3_VERSION_PATCH
  Slicer3_VERSION
  Slicer3_VERSION_FULL

Revision 11982  Directory Listing
Modified Thu Feb 4 22:31:30 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added qCTKUtils - Utility class

Added function: stringListToArray - allowing to convert a QStringList to std::vector<char*>

Use:
 vector<char*> myargv;
 qCTKUtils::stringListToArray(QApplication::application()->arguments(), myargv);
 char** array = &myargv[0];

Revision 11981  Directory Listing
Modified Thu Feb 4 22:31:24 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - In qSlicerApplication, rename non-member function from qSlicerPalette to qSlicerApplyPaletter

The qSlicerPalette didn't describ what the function was made for.
Also added some comment to qSlicerWidgetPlugin

Revision 11980  Directory Listing
Modified Thu Feb 4 22:31:18 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
ENH: SlicerQT - Added qCTKSettings - Wrapper around QSettings providing convenient function to save app settings. (imported from Paraview)

Revision 11979  Directory Listing
Modified Thu Feb 4 22:16:10 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
BUG: switch observations on widgets to use the event broker so can watch for specific events rather than AnyEvent, fixes extra process and update calls when leaving the editor

Revision 11978  Directory Listing
Modified Thu Feb 4 20:12:55 2010 UTC (7 years, 7 months ago) by casey.goodlett
Original Path: trunk
ENH: Reorganize RegisterImagesMultiRes parameters into required, optional, advanced.

Revision 11977  Directory Listing
Modified Thu Feb 4 20:12:52 2010 UTC (7 years, 7 months ago) by casey.goodlett
Original Path: trunk
ENH: Add metric tolerance and maximum line iterations parameters.

Revision 11976  Directory Listing
Modified Thu Feb 4 20:12:48 2010 UTC (7 years, 7 months ago) by casey.goodlett
Original Path: trunk
ENH: Add minimum step size parameter.

Revision 11975  Directory Listing
Modified Thu Feb 4 20:12:42 2010 UTC (7 years, 7 months ago) by casey.goodlett
Original Path: trunk
ENH: Add parameter to control the number of iterations in RegisterImagesMultiRes.

Revision 11974  Directory Listing
Modified Thu Feb 4 19:05:58 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
BUG: fixing memory leak

Revision 11973  Directory Listing
Modified Thu Feb 4 18:49:50 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
STYLE: point to 3.4 tutorials

Revision 11971  Directory Listing
Modified Thu Feb 4 17:19:52 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
BUG: getting rid of a memory leak

Revision 11970  Directory Listing
Modified Thu Feb 4 16:51:06 2010 UTC (7 years, 7 months ago) by vrnova
Original Path: trunk
ENH: adding checkbox to turn on/off VolumeRendering module completely as requested by Ron.

Revision 11967  Directory Listing
Modified Thu Feb 4 16:35:58 2010 UTC (7 years, 7 months ago) by naucoin
Original Path: trunk
BUG: don't close the file here, causes crash on linux

Revision 11965  Directory Listing
Modified Thu Feb 4 13:32:57 2010 UTC (7 years, 7 months ago) by pieper
Original Path: trunk
COMP: try to silence warnings from visual studio on nightly clean buildss

Revision 11964  Directory Listing
Modified Thu Feb 4 02:08:37 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - clean up qCTKCollapsibleButton drawing

Revision 11963  Directory Listing
Modified Thu Feb 4 02:08:33 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - add qCTKMenuButton that is like a QPushButton but shows up the QMenu only when clicked on the indicator.

Revision 11962  Directory Listing
Modified Wed Feb 3 23:45:03 2010 UTC (7 years, 7 months ago) by sylvain
Original Path: trunk
ENH: add code for L1 norm bias field correction. convert image from ITK to VTK, process image and convert back to ITK

Revision 11961  Directory Listing
Modified Wed Feb 3 21:46:30 2010 UTC (7 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Adding null pointer checking, preventing download and uploading requests from being triggered multiple times, added infrastructure for performance profiling

Revision 11960  Directory Listing
Modified Wed Feb 3 21:45:50 2010 UTC (7 years, 7 months ago) by wjp@bwh.harvard.edu
Original Path: trunk
ENH: Adding null pointer checking, preventing download and uploading requests from being triggered multiple times, added infrastructure for performance profiling

Revision 11959  Directory Listing
Modified Wed Feb 3 21:27:11 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - qMRMLNodeFactoryButton and qMRMLSceneGenerator have been obsoleted by qMRMLSceneFactoryWidget. Remove them from the repository.

Revision 11958  Directory Listing
Modified Wed Feb 3 20:50:13 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - use a resource file for qSlicerModulePanel instead of writing the UI programatically.

Revision 11957  Directory Listing
Modified Wed Feb 3 20:50:08 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - apply the StyledPanel to all the qCTKCollapsibleButtons. Make it by default in the designer.
Warning, setting StyledPanel by default in the designer (via qCTKCollapsibleButtonPlugin) doesn't mean that the widget is created by default with a frame.
If you instance the widget programatically, then you should then call: setContentsFrameShape(QFrame::StyledPanel).

Revision 11956  Directory Listing
Modified Wed Feb 3 20:49:57 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - In QCleanlooksStyle, the frame in qCTKCollapsibleButton doesn't seem to "touch" the button.
The style of QCleanlooksStyle (like many other styles) have an extra border around buttons. This extra border creates a discontinuity between the button and the frame which result in a "confusing" look of qCTKCollapsibleButton. To fix it, we hackily remove that space.

Revision 11955  Directory Listing
Modified Wed Feb 3 20:47:59 2010 UTC (7 years, 7 months ago) by sylvain
Original Path: trunk
ENH: add options for alternate bias field correction methods

Revision 11954  Directory Listing
Modified Wed Feb 3 19:48:57 2010 UTC (7 years, 7 months ago) by sylvain
Original Path: trunk
ENH: use a templated function to handle arbitrary input scalar type. Add converters to and from VTK

Revision 11953  Directory Listing
Modified Wed Feb 3 19:07:19 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
COMP: Update CMake/DiscoverSystemNameAndBits.cmake to correctly set Slicer3_BUILD on Darwin

Note: CMAKE_SYSTEM_PROCESSOR MATCHES was compared to 'Intel', it seems this
value isn't valid. 'powerpc' is used instead.

Revision 11952  Directory Listing
Modified Wed Feb 3 18:22:27 2010 UTC (7 years, 7 months ago) by casey.goodlett
Original Path: trunk
STYLE: Remove commented header accidently left in from debugging.

Revision 11951  Directory Listing
Modified Wed Feb 3 18:01:07 2010 UTC (7 years, 7 months ago) by casey.goodlett
Original Path: trunk
BUG: Save and restore the URL and root directory of the MRML scene before importing the MRML files associated with command line module presets.  Without this fix the last set of presets that were imported would be come the default directory and filename for saving the scene.

Revision 11950  Directory Listing
Modified Wed Feb 3 17:49:24 2010 UTC (7 years, 7 months ago) by fedorov
Original Path: trunk
STYLE: trying to fix warnings on win

Revision 11949  Directory Listing
Modified Wed Feb 3 17:31:19 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: SlicerQt - apply QCleanLooksStyle by default for Slicer

Revision 11948  Directory Listing
Modified Wed Feb 3 16:56:10 2010 UTC (7 years, 7 months ago) by fedorov
Original Path: trunk
BUG: revert accidental commit

Revision 11947  Directory Listing
Modified Wed Feb 3 16:55:21 2010 UTC (7 years, 7 months ago) by fedorov
Original Path: trunk
BUG: incorrect input image

Revision 11946  Directory Listing
Modified Wed Feb 3 15:15:19 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
ENH: MRML - Reveal that the vtkMRMLScene doesn't emit NodeRemoved events on deletion

Revision 11945  Directory Listing
Modified Wed Feb 3 14:21:34 2010 UTC (7 years, 7 months ago) by finetjul
Original Path: trunk
BUG: SlicerQt - qMRMLSceneFactoryWidget::deleteNode was crashing when the scene was empty. Add tests for qMRMLSceneFactoryWidget

Revision 11944  Directory Listing
Modified Wed Feb 3 05:40:58 2010 UTC (7 years, 7 months ago) by sylvain
Original Path: trunk
ENH: CLI module MRIBiasFieldCorrection. Code ported from Modules directory and cleaned

Revision 11943  Directory Listing
Modified Wed Feb 3 04:59:28 2010 UTC (7 years, 7 months ago) by jcfr
Original Path: trunk
STYLE: SlicerQT - Clean, comment and remove extra code from qSlicerAbstractModule

Revision 11942  Directory Listing
Modified Wed Feb 3 03:43:18 2010 UTC (7 years, 7 months ago) by lassoan
Original Path: